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Created August 5, 2013 14:29
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helping notte
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_.md
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config.json
{"description":"helping notte","endpoint":"","display":"svg","public":true,"require":[],"fileconfigs":{"inlet.js":{"default":true,"vim":false,"emacs":false,"fontSize":12},"_.md":{"default":true,"vim":false,"emacs":false,"fontSize":12},"config.json":{"default":true,"vim":false,"emacs":false,"fontSize":12},"data.csv":{"default":true,"vim":false,"emacs":false,"fontSize":12}},"fullscreen":false,"play":false,"loop":false,"restart":false,"autoinit":true,"pause":true,"loop_type":"period","bv":false,"nclones":15,"clone_opacity":0.4,"duration":3000,"ease":"linear","dt":0.01,"thumbnail":"http://i.imgur.com/rAnAwmH.png"}
Raw
data.csv
Ensembl Gene ID HGNC symbol Chromosome Name Gene Start (bp) Gene End (bp) MIM Morbid Description
ENSG00000266662 FSCN2 HG271_PATCH 79502196 79510930 RETINITIS PIGMENTOSA 30; RP30
ENSG00000263639 MSMB HG1211_PATCH 46528753 46541772 PROSTATE CANCER, HEREDITARY, 13; HPC13
ENSG00000266412 NCOA4 HG1211_PATCH 46500536 46526162 THYROID CARCINOMA, PAPILLARY
ENSG00000261883 HG299_PATCH 118955575 118964258 PORPHYRIA, ACUTE INTERMITTENT
ENSG00000261910 HG414_PATCH 76839307 76926281 USHER SYNDROME, TYPE I; USH1
ENSG00000261910 HG414_PATCH 76839307 76926281 DEAFNESS, AUTOSOMAL RECESSIVE 2; DFNB2
ENSG00000261910 HG414_PATCH 76839307 76926281 DEAFNESS, AUTOSOMAL DOMINANT 11; DFNA11
ENSG00000262325 HG305_PATCH 102813725 102826464 SPONDYLOEPIMETAPHYSEAL DYSPLASIA, MISSOURI TYPE
ENSG00000198888 MT-ND1 MT 3307 4262 ALZHEIMER DISEASE, SUSCEPTIBILITY TO, MITOCHONDRIAL
ENSG00000198888 MT-ND1 MT 3307 4262 LEBER OPTIC ATROPHY
ENSG00000198888 MT-ND1 MT 3307 4262 MITOCHONDRIAL MYOPATHY, ENCEPHALOPATHY, LACTIC ACIDOSIS, AND STROKE-LIKE
ENSG00000198763 MT-ND2 MT 4470 5511 ALZHEIMER DISEASE, SUSCEPTIBILITY TO, MITOCHONDRIAL
ENSG00000198763 MT-ND2 MT 4470 5511 LEBER OPTIC ATROPHY
ENSG00000198804 MT-CO1 MT 5904 7445 COLORECTAL CANCER; CRC
ENSG00000198804 MT-CO1 MT 5904 7445 MITOCHONDRIAL COMPLEX IV DEFICIENCY
ENSG00000198804 MT-CO1 MT 5904 7445 DEAFNESS, NONSYNDROMIC SENSORINEURAL, MITOCHONDRIAL
ENSG00000198804 MT-CO1 MT 5904 7445 LEBER OPTIC ATROPHY
ENSG00000198804 MT-CO1 MT 5904 7445 MYOGLOBINURIA, RECURRENT
ENSG00000198712 MT-CO2 MT 7586 8269 MITOCHONDRIAL COMPLEX IV DEFICIENCY
ENSG00000198899 MT-ATP6 MT 8527 9207 LEIGH SYNDROME; LS
ENSG00000198899 MT-ATP6 MT 8527 9207 STRIATONIGRAL DEGENERATION, INFANTILE, MITOCHONDRIAL
ENSG00000198899 MT-ATP6 MT 8527 9207 LEBER OPTIC ATROPHY
ENSG00000198899 MT-ATP6 MT 8527 9207 NEUROPATHY, ATAXIA, AND RETINITIS PIGMENTOSA
ENSG00000198938 MT-CO3 MT 9207 9990 MITOCHONDRIAL COMPLEX IV DEFICIENCY
ENSG00000198938 MT-CO3 MT 9207 9990 LEBER OPTIC ATROPHY
ENSG00000198938 MT-CO3 MT 9207 9990 MYOGLOBINURIA, RECURRENT
ENSG00000198840 MT-ND3 MT 10059 10404 MITOCHONDRIAL COMPLEX I DEFICIENCY
ENSG00000198840 MT-ND3 MT 10059 10404 LEIGH SYNDROME; LS
ENSG00000212907 MT-ND4L MT 10470 10766 LEBER OPTIC ATROPHY
ENSG00000198886 MT-ND4 MT 10760 12137 LEBER OPTIC ATROPHY AND DYSTONIA
ENSG00000198886 MT-ND4 MT 10760 12137 LEBER OPTIC ATROPHY
ENSG00000198886 MT-ND4 MT 10760 12137 MITOCHONDRIAL MYOPATHY, ENCEPHALOPATHY, LACTIC ACIDOSIS, AND STROKE-LIKE
ENSG00000198786 MT-ND5 MT 12337 14148 MITOCHONDRIAL COMPLEX I DEFICIENCY
ENSG00000198786 MT-ND5 MT 12337 14148 LEIGH SYNDROME; LS
ENSG00000198786 MT-ND5 MT 12337 14148 LEBER OPTIC ATROPHY
ENSG00000198786 MT-ND5 MT 12337 14148 MITOCHONDRIAL MYOPATHY, ENCEPHALOPATHY, LACTIC ACIDOSIS, AND STROKE-LIKE
ENSG00000198695 MT-ND6 MT 14149 14673 MITOCHONDRIAL COMPLEX I DEFICIENCY
ENSG00000198695 MT-ND6 MT 14149 14673 LEBER OPTIC ATROPHY AND DYSTONIA
ENSG00000198695 MT-ND6 MT 14149 14673 LEBER OPTIC ATROPHY
ENSG00000198695 MT-ND6 MT 14149 14673 MITOCHONDRIAL MYOPATHY, ENCEPHALOPATHY, LACTIC ACIDOSIS, AND STROKE-LIKE
ENSG00000198727 MT-CYB MT 14747 15887 CARDIOMYOPATHY, INFANTILE HISTIOCYTOID
ENSG00000198727 MT-CYB MT 14747 15887 LEBER OPTIC ATROPHY
ENSG00000240194 CYMP 1 111023374 111033899 CHYMOSIN PSEUDOGENE; CYMP
ENSG00000240520 UOX 1 84831111 84863514 URATE OXIDASE, PSEUDOGENE; UOX
ENSG00000262788 CIRH1A HSCHR16_2_CTG3_1 69166418 69202911 NORTH AMERICAN INDIAN CHILDHOOD CIRRHOSIS; NAIC
ENSG00000262577 ALG9 HG388_HG400_PATCH 111652919 111742304 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Il; CDG1L
ENSG00000267229 HG388_HG400_PATCH 111657010 111750144 CONGENITAL DISORDER OF GLYCOSYLATION, TYPE Il; CDG1L
ENSG00000263007 CRYAB HG388_HG400_PATCH 111779288 111794445 MYOPATHY, MYOFIBRILLAR, 2, MFM2
ENSG00000263007 CRYAB HG388_HG400_PATCH 111779288 111794445 CATARACT, POSTERIOR POLAR, 2; CTPP2
ENSG00000263007 CRYAB HG388_HG400_PATCH 111779288 111794445 MYOPATHY, MYOFIBRILLAR, FATAL INFANTILE HYPERTONIC, ALPHA-B CRYSTALLIN-RELATED
ENSG00000263032 DLAT HG388_HG400_PATCH 111895537 111935113 PYRUVATE DEHYDROGENASE E2 DEFICIENCY; PDHDD
ENSG00000262509 BLNK HG339_PATCH 97951459 98031303 AGAMMAGLOBULINEMIA 4, AUTOSOMAL RECESSIVE; AGM4
ENSG00000138449 SLC40A1 2 190425305 190448484 HEMOCHROMATOSIS, TYPE 4; HFE4
ENSG00000261042 SLC52A2 HG243_PATCH 145409038 145416175 BROWN-VIALETTO-VAN LAERE SYNDROME 2; BVVLS2
ENSG00000261297 SLC39A4 HG243_PATCH 145464645 145471798 ACRODERMATITIS ENTEROPATHICA, ZINC-DEFICIENCY TYPE; AEZ
ENSG00000262795 IFNGR2 HSCHR21_4_CTG1_1 34757299 34861212 ATYPICAL MYCOBACTERIOSIS, FAMILIAL
ENSG00000261964 ADAMTS10 HG729_PATCH 8645126 8675619 WEILL-MARCHESANI SYNDROME 1; WMS1
ENSG00000188157 AGRN 1 955503 991496 MYASTHENIA, LIMB-GIRDLE, FAMILIAL
ENSG00000262968 CYP2R1 HG873_PATCH 14899553 14913798 VITAMIN D HYDROXYLATION-DEFICIENT RICKETS, TYPE 1B; VDDR1B
ENSG00000100365 NCF4 22 37257030 37274057 GRANULOMATOUS DISEASE, CHRONIC, AUTOSOMAL RECESSIVE, CYTOCHROME b-POSITIVE,
ENSG00000262762 CBX2 HG748_PATCH 77774214 77784065 46,XY SEX REVERSAL 5; SRXY5
ENSG00000138379 MSTN 2 190920423 190927455 MUSCLE HYPERTROPHY; MSLHP
ENSG00000198130 HIBCH 2 191054461 191208919 BETA-HYDROXYISOBUTYRYL CoA DEACYLASE DEFICIENCY
ENSG00000265231 AKR1C2 HG871_PATCH 5029587 5060223 46,XY SEX REVERSAL 8; SRXY8
ENSG00000188452 CERKL 2 182401403 182545392 RETINITIS PIGMENTOSA 26; RP26
ENSG00000100368 CSF2RB 22 37309670 37336491 SURFACTANT METABOLISM DYSFUNCTION, PULMONARY, 5; SMDP5
ENSG00000266359 AKR1C4 HG871_PATCH 5237654 5261139 46,XY SEX REVERSAL 8; SRXY8
ENSG00000162992 NEUROD1 2 182537815 182545603 DIABETES MELLITUS, NONINSULIN-DEPENDENT; NIDDM
ENSG00000162992 NEUROD1 2 182537815 182545603 MATURITY-ONSET DIABETES OF THE YOUNG; MODY
ENSG00000162992 NEUROD1 2 182537815 182545603 MATURITY-ONSET DIABETES OF THE YOUNG, TYPE 6; MODY6
ENSG00000262563 G6PC2 HSCHR2_1_CTG12 169774739 169783494 FASTING PLASMA GLUCOSE LEVEL QUANTITATIVE TRAIT LOCUS 1; FGQTL1
ENSG00000263298 ABCB11 HSCHR2_1_CTG12 169796437 169904821 CHOLESTASIS, PROGRESSIVE FAMILIAL INTRAHEPATIC, 2; PFIC2
ENSG00000263298 ABCB11 HSCHR2_1_CTG12 169796437 169904821 CHOLESTASIS, BENIGN RECURRENT INTRAHEPATIC, 2; BRIC2
ENSG00000100983 GSS 20 33516236 33543620 GLUTATHIONE SYNTHETASE DEFICIENCY OF ERYTHROCYTES, HEMOLYTIC ANEMIA
ENSG00000100983 GSS 20 33516236 33543620 GLUTATHIONE SYNTHETASE DEFICIENCY; GSSD
ENSG00000158104 HPD 12 122277433 122301502 HAWKINSINURIA
ENSG00000158104 HPD 12 122277433 122301502 TYROSINEMIA, TYPE III
ENSG00000187045 TMPRSS6 22 37461476 37505603 IRON-REFRACTORY IRON DEFICIENCY ANEMIA; IRIDA
ENSG00000262489 RRAS2 HG256_PATCH 14299511 14386053 OVARIAN CANCER
ENSG00000263313 MMP3 HG305_PATCH 102706532 102714534 CORONARY HEART DISEASE, SUSCEPTIBILITY TO, 6; CHDS6
ENSG00000115415 STAT1 2 191829084 191885686 ATYPICAL MYCOBACTERIOSIS, FAMILIAL
ENSG00000115415 STAT1 2 191829084 191885686 MYCOBACTERIAL AND VIRAL INFECTIONS, SUSCEPTIBILITY TO, AUTOSOMAL RECESSIVE
ENSG00000115415 STAT1 2 191829084 191885686 CANDIDIASIS, FAMILIAL, 7; CANDF7
ENSG00000171456 ASXL1 20 30946155 31027122 BOHRING-OPITZ SYNDROME; BOPS
ENSG00000171456 ASXL1 20 30946155 31027122 MYELODYSPLASTIC SYNDROME; MDS
ENSG00000144962 SPATA16 3 172607148 172859058 SPERMATOGENIC FAILURE 6; SPGF6
ENSG00000100234 TIMP3 22 33197687 33259030 FUNDUS DYSTROPHY, PSEUDOINFLAMMATORY, OF SORSBY; SFD
ENSG00000166347 CYB5A 18 71920530 71959251 METHEMOGLOBINEMIA TYPE IV
ENSG00000109062 SLC9A3R1 17 72744791 72765492 NEPHROLITHIASIS/OSTEOPOROSIS, HYPOPHOSPHATEMIC, 2; NPHLOP2
ENSG00000262418 PTPRC HSCHR1_3_CTG31 198619288 198737899 MULTIPLE SCLEROSIS, SUSCEPTIBILITY TO; MS
ENSG00000262418 PTPRC HSCHR1_3_CTG31 198619288 198737899 SEVERE COMBINED IMMUNODEFICIENCY, AUTOSOMAL RECESSIVE, T CELL-NEGATIVE,
ENSG00000133424 LARGE 22 33668847 34318829 MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH MENTAL RETARDATION),
ENSG00000133424 LARGE 22 33668847 34318829 MUSCULAR DYSTROPHY-DYSTROGLYCANOPATHY (CONGENITAL WITH BRAIN AND EYE
ENSG00000261155 FGF3 HG536_PATCH 69624992 69633792 DEAFNESS, CONGENITAL, WITH INNER EAR AGENESIS, MICROTIA, AND MICRODONTIA
ENSG00000185527 PDE6G 17 79617489 79630142 RETINITIS PIGMENTOSA 57; RP57
ENSG00000128340 RAC2 22 37621301 37640488 NEUTROPHIL IMMUNODEFICIENCY SYNDROME
ENSG00000081479 LRP2 2 169983619 170219195 DONNAI-BARROW SYNDROME
ENSG00000138378 STAT4 2 191894302 192016322 RHEUMATOID ARTHRITIS; RA
ENSG00000138378 STAT4 2 191894302 192016322 SYSTEMIC LUPUS ERYTHEMATOSUS, SUSCEPTIBILITY TO, 11; SLEB11
ENSG00000162998 FRZB 2 183698002 183731890 OSTEOARTHRITIS SUSCEPTIBILITY 1; OS1
ENSG00000068615 REEP1 2 86441116 86565206 SPASTIC PARAPLEGIA 31, AUTOSOMAL DOMINANT; SPG31
ENSG00000068615 REEP1 2 86441116 86565206 NEURONOPATHY, DISTAL HEREDITARY MOTOR, TYPE VB; HMN5B
ENSG00000088305 DNMT3B 20 31350191 31397162 IMMUNODEFICIENCY-CENTROMERIC INSTABILITY-FACIAL ANOMALIES SYNDROME
ENSG00000262243 CES1 HSCHR16_1_CTG3_1 55849157 55879488 CARBOXYLESTERASE 1; CES1
ENSG00000163093 BBS5 2 170335688 170382432 BARDET-BIEDL SYNDROME; BBS
ENSG00000267807 ACTG1 HG271_PATCH 79483771 79497647 DEAFNESS, AUTOSOMAL DOMINANT 20; DFNA20
ENSG00000267807 ACTG1 HG271_PATCH 79483771 79497647 BARAITSER-WINTER SYNDROME 2; BRWS2
ENSG00000175294 CATSPER1 11 65784223 65793988 SPERMATOGENIC FAILURE 7; SPGF7
ENSG00000234906 APOC2 19 45450460 45452822 APOLIPOPROTEIN C-II DEFICIENCY
ENSG00000260825 GPR179 HG745_PATCH 36481493 36499730 NIGHT BLINDNESS, CONGENITAL STATIONARY, TYPE 1E; CSNB1E
ENSG00000263162 HERC2 HSCHR15_1_CTG4 28356186 28567298 SKIN/HAIR/EYE PIGMENTATION, VARIATION IN, 1; SHEP1
ENSG00000263243 KRT12 HSCHR17_4_CTG4 39017555 39023462 CORNEAL DYSTROPHY, MEESMANN; MECD
ENSG00000262446 GBA HSCHR1_2_CTG31 155219647 155229865 PARKINSON DISEASE, LATE-ONSET; PD
ENSG00000262446 GBA HSCHR1_2_CTG31 155219647 155229865 GAUCHER DISEASE, TYPE I
ENSG00000262446 GBA HSCHR1_2_CTG31 155219647 155229865 GAUCHER DISEASE, TYPE II
ENSG00000262446 GBA HSCHR1_2_CTG31 155219647 155229865 GAUCHER DISEASE, TYPE III
ENSG00000262446 GBA HSCHR1_2_CTG31 155219647 155229865 GAUCHER DISEASE, TYPE IIIC
ENSG00000262446 GBA HSCHR1_2_CTG31 155219647 155229865 GAUCHER DISEASE, PERINATAL LETHAL
ENSG00000125965 GDF5 20 34021145 34042568 BRACHYDACTYLY, TYPE A1; BDA1
ENSG00000125965 GDF5 20 34021145 34042568 BRACHYDACTYLY, TYPE A2; BDA2
ENSG00000125965 GDF5 20 34021145 34042568 BRACHYDACTYLY, TYPE C; BDC
ENSG00000125965 GDF5 20 34021145 34042568 SYMPHALANGISM, PROXIMAL; SYM1
ENSG00000125965 GDF5 20 34021145 34042568 CHONDRODYSPLASIA, GREBE TYPE
ENSG00000125965 GDF5 20 34021145 34042568 ACROMESOMELIC DYSPLASIA, HUNTER-THOMPSON TYPE
ENSG00000125965 GDF5 20 34021145 34042568 FIBULAR HYPOPLASIA AND COMPLEX BRACHYDACTYLY
ENSG00000125965 GDF5 20 34021145 34042568 MULTIPLE SYNOSTOSES SYNDROME 2; SYNS2
ENSG00000125965 GDF5 20 34021145 34042568 OSTEOARTHRITIS SUSCEPTIBILITY 5; OS5
ENSG00000179981 TSHZ1 18 72922710 73001905 AURAL ATRESIA, CONGENITAL; CAA
ENSG00000125454 SLC25A19 17 73269073 73285591 MICROCEPHALY, AMISH TYPE; MCPHA
ENSG00000125454 SLC25A19 17 73269073 73285591 THIAMINE METABOLISM DYSFUNCTION SYNDROME 4 (BILATERAL STRIATAL DEGENERATION
ENSG00000121879 PIK3CA 3 178865902 178957881 BREAST CANCER
ENSG00000121879 PIK3CA 3 178865902 178957881 COLORECTAL CANCER; CRC
ENSG00000121879 PIK3CA 3 178865902 178957881 HEPATOCELLULAR CARCINOMA
ENSG00000121879 PIK3CA 3 178865902 178957881 OVARIAN CANCER
ENSG00000121879 PIK3CA 3 178865902 178957881 KERATOSIS, SEBORRHEIC
ENSG00000121879 PIK3CA 3 178865902 178957881 CONGENITAL LIPOMATOUS OVERGROWTH, VASCULAR MALFORMATIONS, AND EPIDERMAL
ENSG00000112592 TBP 6 170863390 170881958 SPINOCEREBELLAR ATAXIA 17; SCA17
ENSG00000231834 HLA-A HSCHR6_MHC_MANN 29898024 29902665 SEVERE CUTANEOUS ADVERSE REACTION, SUSCEPTIBILITY TO
ENSG00000256269 HMBS 11 118955576 118964259 PORPHYRIA, ACUTE INTERMITTENT
ENSG00000121966 CXCR4 2 136871919 136875735 WHIM SYNDROME
ENSG00000185379 RAD51D 17 33426811 33448541 BREAST-OVARIAN CANCER, FAMILIAL, SUSCEPTIBILITY TO, 4; BROVCA4
ENSG00000260596 DUX4 HG1032_PATCH 191094929 191107097 FACIOSCAPULOHUMERAL MUSCULAR DYSTROPHY 1; FSHD1
ENSG00000168778 TCTN2 12 124155660 124192948 MECKEL SYNDROME, TYPE 8; MKS8
ENSG00000250361 GYPB 4 144917257 145061844 BLOOD GROUP--Ss LOCUS; Ss
ENSG00000172922 RNASEH2C 11 65482367 65488418 AICARDI-GOUTIERES SYNDROME 3; AGS3
ENSG00000125744 RTN2 19 45988547 46000319 SPASTIC PARAPLEGIA 12, AUTOSOMAL DOMINANT; SPG12
ENSG00000167323 STIM1 11 3875757 4114439 IMMUNE DYSFUNCTION WITH T-CELL INACTIVATION DUE TO CALCIUM ENTRY DEFECT
ENSG00000087085 ACHE 7 100487615 100494594 YT BLOOD GROUP ANTIGEN
ENSG00000232641 MOG HSCHR6_MHC_MCF 29624568 29639934 NARCOLEPSY 7; NRCLP7
Raw
inlet.js
var data = tributary.data;
console.log(data[0]['Chromosome Name'])
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