Created
November 16, 2011 18:41
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THREDDS 4.2.9 Error
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| <catalog name="Maracoos Observation and Forcast Data TDS" | |
| xmlns="http://www.unidata.ucar.edu/namespaces/thredds/InvCatalog/v1.0" | |
| xmlns:xlink="http://www.w3.org/1999/xlink"> | |
| <service name="all" base="" serviceType="compound"> | |
| <service name="odap" serviceType="OpenDAP" base="/thredds/dodsC/" /> | |
| <service name="http" serviceType="HTTPServer" base="/thredds/fileServer/" /> | |
| <service name="iso" serviceType="ISO" base="/thredds/iso/"/> | |
| </service> | |
| <service name="agg" base="" serviceType="compound"> | |
| <service name="odap" serviceType="OpenDAP" base="/thredds/dodsC/" /> | |
| <service name="iso" serviceType="ISO" base="/thredds/iso/"/> | |
| </service> | |
| <dataset name="MODIS-Complete Aggregation" ID="MODIS-Agg" urlPath="MODIS-Agg.nc"> | |
| <serviceName>agg</serviceName> | |
| <netcdf xmlns="http://www.unidata.ucar.edu/namespaces/netcdf/ncml-2.2"> | |
| <aggregation dimName="time" type="joinExisting" recheckEvery="15 min"> | |
| <scan location="/data/modis" suffix=".nc4" subdirs="true"/> | |
| </aggregation> | |
| </netcdf> | |
| </dataset> | |
| <datasetScan name="MODIS Individual Files" ID="modisDatasetScan" | |
| path="MODIS" location="/data/modis"> | |
| <metadata inherited="true"> | |
| <serviceName>all</serviceName> | |
| </metadata> | |
| <filter> | |
| <include wildcard="*.nc4"/> | |
| </filter> | |
| </datasetScan> | |
| </catalog> |
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| [root@tds thredds]# ll -h /data/modis/ | |
| total 20K | |
| drwxrwxr-x 2 maracoos-upload maracoos-upload 4.0K Nov 16 11:40 2011 | |
| drwx------ 2 root maracoos-upload 16K Nov 15 10:07 lost+found | |
| [root@tds thredds]# ll -h /data/modis/2011/ | |
| total 3.0G | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 60M Nov 15 15:17 aqua.2011291.1018.182055.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 40M Nov 15 15:17 aqua.2011292.1019.190444.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 99M Nov 15 15:18 aqua.2011293.1020.180757.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 11M Nov 15 15:18 aqua.2011293.1020.194950.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 116M Nov 15 15:18 aqua.2011294.1021.171348.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 99M Nov 15 15:18 aqua.2011295.1022.175537.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 42M Nov 15 15:18 aqua.2011295.1022.193606.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 105M Nov 15 15:18 aqua.2011296.1023.170157.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 109M Nov 15 15:18 aqua.2011296.1023.183836.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 68M Nov 15 15:18 aqua.2011297.1024.192257.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 97M Nov 15 15:18 aqua.2011298.1025.182607.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 65M Nov 15 15:18 aqua.2011299.1026.191008.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 89M Nov 15 15:18 aqua.2011300.1027.181358.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 7.2M Nov 15 15:18 aqua.2011300.1027.195637.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 108M Nov 15 15:18 aqua.2011301.1028.171947.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 46M Nov 15 15:18 aqua.2011301.1028.185823.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 68M Nov 15 15:18 aqua.2011302.1029.180157.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 25M Nov 15 15:18 aqua.2011302.1029.194253.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 62M Nov 15 15:19 aqua.2011303.1030.170804.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 65M Nov 15 15:19 aqua.2011303.1030.184504.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 103M Nov 15 15:19 aqua.2011305.1101.183237.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 64M Nov 15 15:19 aqua.2011306.1102.191636.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 127M Nov 15 15:19 aqua.2011307.1103.182014.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 74M Nov 15 15:19 aqua.2011308.1104.190343.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 66M Nov 15 15:19 aqua.2011309.1105.180752.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 11M Nov 15 15:19 aqua.2011309.1105.194953.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 81M Nov 15 15:19 aqua.2011310.1106.185117.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 115M Nov 15 15:19 aqua.2011311.1107.175547.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 19M Nov 15 15:19 aqua.2011311.1107.193708.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 122M Nov 15 15:19 aqua.2011312.1108.170208.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 95M Nov 15 15:19 aqua.2011313.1109.174337.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 35M Nov 15 15:19 aqua.2011313.1109.192308.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 104M Nov 15 15:19 aqua.2011314.1110.182618.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 82M Nov 15 15:19 aqua.2011315.1111.173138.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 53M Nov 15 15:19 aqua.2011315.1111.191018.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 114M Nov 15 15:19 aqua.2011316.1112.181356.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 7.4M Nov 15 15:19 aqua.2011316.1112.195648.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 110M Nov 15 15:19 aqua.2011317.1113.171947.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 75M Nov 15 15:20 aqua.2011317.1113.185727.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 97M Nov 15 15:20 aqua.2011318.1114.180201.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 16M Nov 15 15:20 aqua.2011318.1114.194300.D.L3.modis.NAT.v09.1000m.nc4 | |
| -rw-r--r-- 1 maracoos-upload maracoos-upload 64M Nov 15 17:31 aqua.2011319.1115.170757.D.L3.modis.NAT.v09.1000m.nc4 |
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| 2011-11-16T12:32:45.361 -0500 [ 60016][ 11] INFO - thredds.server.opendap.OpendapServlet - doGet(): Remote host: 184.180.13.66 - Request: "GET /thredds/dodsC/MODIS-Agg.nc.html HTTP/1.1" | |
| 2011-11-16T12:32:45.363 -0500 [ 60018][ 11] ERROR - thredds.server.opendap.OpendapServlet - path= /MODIS-Agg.nc.html | |
| java.lang.NullPointerException | |
| at thredds.filesystem.ControllerOS$Traversal.<init>(ControllerOS.java:233) | |
| at thredds.filesystem.ControllerOS$MFileIteratorWithSubdirs.getNextIterator(ControllerOS.java:206) | |
| at thredds.filesystem.ControllerOS$MFileIteratorWithSubdirs.getNextIterator(ControllerOS.java:212) | |
| at thredds.filesystem.ControllerOS$MFileIteratorWithSubdirs.hasNext(ControllerOS.java:184) | |
| at thredds.filesystem.ControllerOS$FilteredIterator.nextFilteredFile(ControllerOS.java:126) | |
| at thredds.filesystem.ControllerOS$FilteredIterator.hasNext(ControllerOS.java:112) | |
| at thredds.inventory.DatasetCollectionManager.scan(DatasetCollectionManager.java:478) | |
| at thredds.inventory.DatasetCollectionManager.scan(DatasetCollectionManager.java:322) | |
| at ucar.nc2.ncml.Aggregation.finish(Aggregation.java:402) | |
| at ucar.nc2.ncml.NcMLReader.readNetcdf(NcMLReader.java:487) | |
| at ucar.nc2.ncml.NcMLReader.readNcML(NcMLReader.java:432) | |
| at ucar.nc2.ncml.NcMLReader.readNcML(NcMLReader.java:350) | |
| at thredds.servlet.DatasetHandler$NcmlFileFactory.open(DatasetHandler.java:257) | |
| at thredds.servlet.DatasetHandler$NcmlFileFactory.open(DatasetHandler.java:248) | |
| at ucar.nc2.util.cache.FileCache.acquire(FileCache.java:223) | |
| at ucar.nc2.dataset.NetcdfDataset.openOrAcquireFile(NetcdfDataset.java:694) | |
| at ucar.nc2.dataset.NetcdfDataset.acquireFile(NetcdfDataset.java:629) | |
| at thredds.servlet.DatasetHandler.getNetcdfFile(DatasetHandler.java:158) | |
| at thredds.server.opendap.OpendapServlet.getDataset(OpendapServlet.java:876) | |
| at thredds.server.opendap.OpendapServlet.doGetHTML(OpendapServlet.java:619) | |
| at thredds.server.opendap.OpendapServlet.doGet(OpendapServlet.java:229) | |
| at javax.servlet.http.HttpServlet.service(HttpServlet.java:621) | |
| at javax.servlet.http.HttpServlet.service(HttpServlet.java:722) | |
| at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:304) | |
| at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) | |
| at thredds.servlet.filter.CookieFilter.doFilter(CookieFilter.java:54) | |
| at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) | |
| at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) | |
| at thredds.servlet.filter.RequestQueryFilter.doFilter(RequestQueryFilter.java:122) | |
| at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) | |
| at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) | |
| at thredds.servlet.filter.RequestPathFilter.doFilter(RequestPathFilter.java:105) | |
| at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:243) | |
| at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:210) | |
| at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:224) | |
| at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:169) | |
| at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:472) | |
| at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:168) | |
| at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:100) | |
| at org.apache.catalina.valves.AccessLogValve.invoke(AccessLogValve.java:929) | |
| at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:118) | |
| at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:405) | |
| at org.apache.coyote.ajp.AjpAprProcessor.process(AjpAprProcessor.java:197) | |
| at org.apache.coyote.AbstractProtocol$AbstractConnectionHandler.process(AbstractProtocol.java:515) | |
| at org.apache.tomcat.util.net.AprEndpoint$SocketWithOptionsProcessor.run(AprEndpoint.java:1782) | |
| at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1110) | |
| at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:603) | |
| at java.lang.Thread.run(Thread.java:722) |
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it acts like theres a null pointer in the directory list, which i cant reproduce.
ive made a release with some diagnostics in it -
ftp://ftp.unidata.ucar.edu/pub/thredds/4.2/4.2.asaTest/thredds.war
can you try, when it breaks there will be some output in catalina.out with "ControllerOS" in it.
thanks