patch-to-sage-library.patch

diff --git a/sage/interfaces/jmoldata.py b/sage/interfaces/jmoldata.py
--- a/sage/interfaces/jmoldata.py
+++ b/sage/interfaces/jmoldata.py
@@ -80,6 +80,8 @@
             sage: type(JData.is_jvm_available())
             <type 'bool'>
         """
+        # This is not working for some reason on mod.math.washington.edu
+        return False
         #scratch file for  Jmol errors and status
         jmolscratch = os.path.join(DOT_SAGE, "sage_notebook.sagenb", "jmol_scratch")
         if not os.path.exists(jmolscratch):

patch-to-sagenb.patch

diff --git a/sagenb/notebook/cell.py b/sagenb/notebook/cell.py
index 1580580..16675fe 100644
--- a/sagenb/notebook/cell.py
+++ b/sagenb/notebook/cell.py
@@ -2374,9 +2374,10 @@ class Cell(Cell_generic):
                     jmol_file.close()
 
                 #script = '<div><script>jmol_applet(%s, "%s?%d");</script></div>' % (size, url, time.time())
-                script = '<div id = "jmol_static%s">Sleeping...<button onClick="javascript:void(jmol_launch(%s, \'%s?%d\', %s))">Make Interactive</button>'  % (self._id, size, url, time.time(), self._id)
+                #script = '<div id = "jmol_static%s">Sleeping...<button onClick="javascript:void(jmol_launch(%s, \'%s?%d\', %s))">Make Interactive</button>'  % (self._id, size, url, time.time(), self._id)
+                script = '<div id = "jmol_static%s" style="display: none;"></div><script>setTimeout(function() {jmol_applet(%s, "%s?%d", %s);}, 100);</script>'  % (self._id, size, url, time.time(), self._id)
                 image_name = os.path.join(self.url_to_self(),'.jmol_images',F)
-                script += '<br><img src="%s.png?%d" alt="If no image appears re-execute the cell. 3-D viewer has been updated."></div>' % (image_name, time.time())
+                #script += '<br><img src="%s.png?%d" alt="If no image appears re-execute the cell. 3-D viewer has been updated."></div>' % (image_name, time.time())
                 images.append(script)
                 jmolimagebase = F
                 hasjmol=True
@@ -2395,6 +2396,7 @@ class Cell(Cell_generic):
                     link_text = link_text[:10] + '...' + link_text[-20:]
                 files.append('<a target="_new" href="%s" class="file_link">%s</a>' % (url, link_text))
 
+        hasjmol=False
         if(hasjmol and not hasjmolimages):
             # This is probably an old worksheet. Generate the missing jmol static image(s)
             # Note: this is problematic in the notebook as it uses tools from Sage to