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Matthias Bussonnier Carreau

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View ptibug
/Users/bussonniermatthias/anaconda3/lib/python3.4/site-packages/ptpython/ipython.py in raw_input(sel)
196 print('')
197 try:
--> 198 string = self._cli.run().text
199 acs 2/2 [F6] Paste mode (off) [F2] Options - CPython 3.4.3
200 # In case of multiline input, make sure to append a newline to the input,
/Users/bussonniermatthias/anaconda3/lib/python3.4/site-packages/prompt_toolkit/interface.py in run(s)
272 self._redraw()
273
View Makefile
# Makefile for Sphinx documentation
#
# You can set these variables from the command line.
SPHINXOPTS =
SPHINXBUILD = sphinx-build
PAPER =
BUILDDIR = _build
# Internal variables.
View SWC-8.3.ipynb
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View MyFirstNotebook.ipynb
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View README.md

Actin Threadmilling

This is a proof of concept of a live simlation of actin threadmilling using Mike Bostock D3 javascript library.

Dark monomers (and left pool)a re ADP actin, light monomer (and right pool) are APT actin. Middle pool should be ATP + profiline, that for now only participate on the regeneration of ATD into ATP.

The simulation is quite fast, but one should still be able to see rare addition of monomer to the pointed end, and monomer detaching from the pointed end.

@Carreau
Carreau / maketheme.js
Created Apr 19, 2014
To build IPython Notebook themes. `node maketheme.js <variable.less> <output file>`
View maketheme.js
#!/usr/env node
var less = require('less')
var fs = require('fs');
var parser = new(less.Parser)({
paths : ['.','IPython/html/static/style/'],
filename: 'ipython.less'
});
var otherimp = process.argv[2];
@Carreau
Carreau / name.js
Created Apr 19, 2014
a test js extension
View name.js
define(["require"], function(require) {
"use strict";
// first param reference to a DOM div
// second param reference to the cell.
/**
* Build a list of already existing names, except on given cell
*/
@Carreau
Carreau / dmask.pyx
Created Apr 25, 2014
Some cython model for my research
View dmask.pyx
import cython
import numpy
#cimport numpy
cimport cython
from libc.math cimport exp, sqrt
from cython.view cimport array as cvarray
@cython.cdivision(True)
cdef inline double dgauss(double radius, double x, double spread):
View Interactive Fortran.ipynb
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View foobar.diff
diff --git a/examples/Notebook/Notebook Basics.ipynb b/examples/Notebook/Notebook Basics.ipynb
index 958316f..4024524 100644
--- a/examples/Notebook/Notebook Basics.ipynb
+++ b/examples/Notebook/Notebook Basics.ipynb
@@ -1,7 +1,16 @@
{
"metadata": {
{+"kernelspec": {+}
{+ "codemirror_mode": {+}
{+ "name": "ipython",+}
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