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How to make MinoTour clusterable / OpenPBS torque
this gist contains all the script modifications which are needed
for minoTour's most computational intense components mT_control and minUP
to use openpbs/torque and run on the computenodes instead of constantly killing our webserver
i made this in a quickhack/hardcoded changes fashion
files to modify :
to make minUP alignments clusterable
checkout linminup from github and create a new subfolder
$ git clone https://github.com/minoTour/linminUP.git
$ cd linminUP/modules
* modules/processRefFasta.py modifing from 0b6f59d
*
*
TODO
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