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@Thell
Created December 20, 2021 22:30
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Benchmarking returning zero filled rcpp vs rextendr vector and matrix.
# compare rcpp and rust zero matrices performance to test wrap times.
library(microbenchmark)
Rcpp::sourceCpp(
code = '
#include <Rcpp.h>
using namespace Rcpp;
// [[Rcpp::export]]
IntegerVector rcpp_zeros_intvec(int n) {
IntegerVector my_vec(n);
return my_vec;
}
// [[Rcpp::export]]
IntegerMatrix rcpp_zeros_intmat(int n) {
IntegerMatrix my_mat(n, n);
return my_mat;
}
// [[Rcpp::export]]
IntegerVector rcpp_zeros_intvec_dimmed(int n) {
IntegerVector my_vec(n * n);
my_vec.attr("dim") = Dimension(n, n);
return my_vec;
}
')
rextendr::rust_source(
profile = "release",
extendr_deps = list(
`extendr-api` = list(git = "https://github.com/extendr/extendr")
),
code = '
/// @export
#[extendr]
fn rust_zeros_intvec(n: i32) -> Robj {
let my_vec = vec!(0; n as usize);
r!(my_vec)
}
/// @export
#[extendr]
fn rust_zeros_intmat(n: i32) -> Robj {
let my_mat = RMatrix::new_matrix(n as usize, n as usize, |_, _| 0);
r!(my_mat)
}
/// @export
#[extendr]
fn rust_zeros_intmat_viavec(n: i32) -> Robj {
let my_vec = vec!(0; n as usize * n as usize);
let my_mat: RMatrix<i32> = r!(my_vec).as_matrix().unwrap();
r!(my_mat)
}
extendr_module! {
mod rust_wrap;
fn rust_zeros_intvec;
fn rust_zeros_intmat;
fn rust_zeros_intmat_viavec;
}
')
cat("\n************ integer vector\n")
cat("cpp and rust all.equal? ")
print(all.equal(rcpp_zeros_intvec(100), rust_zeros_intvec(100)))
cat("\n************ integer matrix direct\n")
cat("cpp and rust all.equal? ")
print(all.equal(rcpp_zeros_intmat(100), rust_zeros_intmat(100)))
cat("\n************ integer matrix via vec\n")
cat("cpp and rust all.equal? ")
cat("No rust solution to compare to yet.")
cat("\n************ microbench results\n")
for (N in cumprod(c(10, rep(2, 6)))) {
cat("N = ", N, "\n")
mb_ziv_out <- microbenchmark(rcpp_zeros_intvec(N), rust_zeros_intvec(N),
rcpp_zeros_intmat(N), rust_zeros_intmat(N),
rcpp_zeros_intvec_dimmed(N), times=1000)
print(mb_ziv_out)
}
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