Adam Voss adamvoss

## Fitting-Alignment-Problem-Datasets-And-Output.md

      
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                adamvoss
                / Fitting-Alignment-Problem-Datasets-And-Output.md
            
            
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                Sample Data and Extra Dataset solutions for exercise "1.3 The Changing Faces of Sequence Alignment" for Stepik Course "How Do We Compare Biological Sequences?" Week 2 (https://stepik.org/lesson/The-Changing-Faces-of-Sequence-Alignment-248/step/5?course=Stepic-Interactive-Text-for-Week-2&unit=8279)
              
          
    Sample Data

Sample Input:

GTAGGCTTAAGGTTA

TAGATA
Sample Output with Prescedence: [↘, →, ↓] or [↘, ↓, →]

2

TAGGCTTA

TAGA-T-A

  
## Local-Alignment-Problem-Extra-Dataset.md

      
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              February 11, 2017 01:39
            
              
                Extra Dataset solutions for exercise "1.2 From Global to Local Alignment" for Stepik Course "How Do We Compare Biological Sequences?" Week 2 (https://stepik.org/lesson/From-Global-to-Local-Alignment-247/step/10?course=Stepic-Interactive-Text-for-Week-2&unit=8278)
              
          
    Input:

AMTAFRYRQGNPRYVKHFAYEIRLSHIWLLTQMPWEFVMGIKMPEDVFQHWRVYSVCTAEPMRSDETYEQKPKPMAKWSGMTIMYQAGIIRQPPRGDRGVSDRNYSQCGKQNQAQLDNNPTWTKYEIEWRVQILPPGAGVFEGDNGQNQCLCPNWAWEQPCQWGALHSNEQYPNRIHLWAPMSKLHIKIEKSSYNRNAQFPNRCMYECEFPSYREQVDSCHYENVQIAFTIFSGAEQKRKFCSCHFWSNFIDQAVFSTGLIPWCYRRDDHSAFFMPNWNKQYKHPQLQFRVAGEGTQCRPFYTREMFTKVSAWRIAGRFAGPYERHHDAHLELWYQHHKVRTGQQLGIIWNNRDKTRNPCPFSAYYNKLPWWKINQNAFYNCLQNIAHSTHDETHEFNPVKCIDWLQGTMVPTECKKGFVHEKCECYRNPGPPLHDMYHQMEDIFGVRFDCLTGWKHLSDYNPCQERRNINDFYIFAYEIAPAVKNLVLSPQPLADATKKCAFNYTPLDQSPVVIACKWYIHQPICMLLIVLICAMDKYNAHMIVIRTTEGQQPMHACRMTEGPGMCMKEPLVTFTLPAQWQWPNHEFKYVYMYVLNYHLSQYTYTDEGHAGGQHYSFNVAVDVGMAWGHNRCYCQPACYSQQETQTRTIDYEKWQYMKHQAFKWGLWFCEQERHAWFKGQNRCEMFTAKMTRMGADSNLDQYKLMLAQNYEEQWEQPIMECGMSEIIEIDPPYRSELIFTFWPFCTYSPWQNLIKCRCNNVIEEMDQCVPLTFIGFGVKQAGGIQAWAFYKEEWTSTYYLMCQCMKSDKAQYPYEIILFWMQPMDTGEQEPPQQNMWIFLPHSWFFDWCCNAPWSEICSSRHDHGQCQDAFYPCELFTVFDDIFTAEPVVCSCFYDDPM
WQEKAVDGTVPSRHQYREKEDRQGNEIGKEFRRGPQVCEYSCNSHSCGWMPIFCIVCMSYVAFYCGLEYPMSRKTAKSQFIEWCDWFCFNHWTNWAPLSIVRTSVAFAVWGHC

  
## si-jira-github-user-mapping.csv

          
            Eugene Burmako
            xeno-by

            
              Adriaan Moors
              adriaanm

            
              Martin Odersky
              retronym

            
              Lukas Rytz
              Ichoran

            
              Martin Odersky
              odersky

            
              Lukas Rytz
              lrytz

            
              Denys Shabalin
              densh

            
              Vlad Ureche
              VladUreche

            
              A. P. Marki
              som-snytt

            
              Hubert Plociniczak
              hubertp

## sstable.py

"""
    MoinMoin - sstable a Processor for spread sheet calculations using only Python.

    @license: GNU GPL, see COPYING for details.

    PURPOSE:
        This processor is used to do some spread sheet calculation in a regular wiki
    table using only Python. The first column/first line coordinate is A0.
	Eugene Burmako	xeno-by
	Adriaan Moors	adriaanm
	Martin Odersky	retronym
	Lukas Rytz	Ichoran
	Martin Odersky	odersky
	Lukas Rytz	lrytz
	Denys Shabalin	densh
	Vlad Ureche	VladUreche
	A. P. Marki	som-snytt
	Hubert Plociniczak	hubertp

	"""
	MoinMoin - sstable a Processor for spread sheet calculations using only Python.

	@license: GNU GPL, see COPYING for details.

	PURPOSE:
	This processor is used to do some spread sheet calculation in a regular wiki
	table using only Python. The first column/first line coordinate is A0.