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Abraham Flaxman aflaxman

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aflaxman / 2022_01_29b_vaccine_and_infection_correlation_replication.ipynb
Created Jan 29, 2022
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aflaxman / numpyro_abc_kernel.py
Last active Jan 29, 2022
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import numpy as np, pandas as pd, matplotlib.pyplot as plt
from collections import namedtuple
from jax import random, lax
from jax.flatten_util import ravel_pytree
import jax.numpy as jnp
import numpyro
import numpyro.distributions as dist
from numpyro.infer import MCMC, util, init_to_sample
from numpyro.infer.mcmc import MCMCKernel
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aflaxman / numpyro_metropolis_kernel_2.py
Last active Jan 9, 2022
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from collections import namedtuple
from jax import random
from jax.flatten_util import ravel_pytree
import jax.numpy as jnp
import numpyro
import numpyro.distributions as dist
from numpyro.infer import MCMC, util
from numpyro.infer.mcmc import MCMCKernel
MetState = namedtuple("MetState", ["z", "rng_key"])
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aflaxman / numpyro_metropolis_kernel.py
Created Jan 4, 2022
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from collections import namedtuple
from jax import random
from jax.flatten_util import ravel_pytree
import jax.numpy as jnp
import numpyro
import numpyro.distributions as dist
from numpyro.infer import MCMC, util
from numpyro.infer.mcmc import MCMCKernel
MetState = namedtuple("MetState", ["z", "rng_key"]) # does it matter if it is called z or u?
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aflaxman / 2022_01_01a_numpyro_ab_testing_model.ipynb
Created Jan 2, 2022
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aflaxman / 2021_02_12a_ergm_for_households.ipynb
Created Feb 12, 2021
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aflaxman / 2020_11_12d_pymc_latent_scaled_poisson.ipynb
Created Nov 13, 2020
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aflaxman / 2020_11_11a_pymc_spline_example.ipynb
Created Nov 11, 2020
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aflaxman / 2020_05_07a_covid19_parametric_death_redistribution_for_nyc_discontinuity.ipynb
Created May 8, 2020
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aflaxman / sdc_sources.csv
Created Apr 24, 2020
Government-mandated social distancing by location and date
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We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 15 columns, instead of 14. in line 1.
name,country,admin1,Mass gathering restrictions,Stay at Home Order,Educational facilities closed,Initial business closures,Non-essential services closed,Travel severely limited,Source Mass gathering restrictions,Source Stay at Home Order,Source Educational facilities closed,Source Initial business closure,Source Non-essential services closed,Source Travel severely limited
Baden-Wurttemberg,Germany,Baden-Wurttemberg,full implementation,21.03.2020,17.03.2020,full implementation,21.03.2020,not implemented,https://stm.baden-wuerttemberg.de/fileadmin/redaktion/dateien/PDF/Coronainfos/200322_Rechtsverordnung_englisch.pdf,https://stm.baden-wuerttemberg.de/fileadmin/redaktion/dateien/PDF/Coronainfos/200322_Rechtsverordnung_englisch.pdf,https://stm.baden-wuerttemberg.de/fileadmin/redaktion/dateien/PDF/200317_StM_VO_IfSG_Corona.pdf,https://stm.baden-wuerttemberg.de/fileadmin/redaktion/dateien/PDF/Coronainfos/200322_Rechtsverordnung_englisch.pdf,https://stm.baden-wuerttemberg.de/fileadmin/redaktion/dateien/PDF/Coronainf