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checking build system type... x86_64-apple-darwin13.0.0
checking host system type... x86_64-apple-darwin13.0.0
loading site script './config.site'
loading build-specific script './config.site'
checking for pwd... /bin/pwd
checking whether builddir is srcdir... yes
checking for working aclocal... found
checking for working autoconf... found
checking for working automake... found
checking for working autoheader... found
checking for gawk... no
checking for mawk... no
checking for nawk... no
checking for awk... awk
checking whether ln -s works... yes
checking for bison... bison -y
checking for ar... ar
checking for a BSD-compatible install... /usr/bin/install -c
checking for sed... /usr/bin/sed
checking for which... /usr/bin/which
checking for less... /usr/bin/less
checking for gtar... no
checking for gnutar... no
checking for tar... /usr/bin/tar
checking for tex... no
checking for pdftex... no
configure: WARNING: you cannot build PDF versions of the R manuals
checking for pdflatex... no
configure: WARNING: you cannot build PDF versions of vignettes and help pages
checking for makeindex... no
checking for makeinfo... /usr/bin/makeinfo
checking whether makeinfo version is at least 4.7... yes
checking for ginstall-info... no
checking for install-info... /usr/bin/install-info
checking for texi2dvi... /usr/bin/texi2dvi
checking for kpsewhich... no
checking for unzip... /usr/bin/unzip
checking for zip... /usr/bin/zip
checking for gzip... /usr/bin/gzip
checking for bzip2... /usr/bin/bzip2
checking for firefox... no
checking for mozilla... no
checking for galeon... no
checking for opera... no
checking for xdg-open... no
checking for kfmclient... no
checking for gnome-moz-remote... no
checking for open... /usr/bin/open
using default browser ... /usr/bin/open
checking for acroread... no
checking for acroread4... no
checking for xdg-open... no
checking for evince... no
checking for xpdf... no
checking for gv... no
checking for gnome-gv... no
checking for ggv... no
checking for okular... no
checking for kpdf... no
checking for open... /usr/bin/open
checking for notangle... false
checking for realpath... false
checking for pkg-config... /usr/local/bin/pkg-config
checking for gcc... /usr/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for /usr/bin/clang option to accept ISO C89... none needed
checking how to run the C preprocessor... /usr/bin/clang -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking whether /usr/bin/clang needs -traditional... no
checking how to run the C preprocessor... /usr/bin/clang -E
defining F77 to be /usr/local/bin/gfortran
checking whether we are using the GNU Fortran 77 compiler... yes
checking whether /usr/local/bin/gfortran accepts -g... yes
checking whether we are using the GNU C++ compiler... yes
checking whether /usr/bin/clang++ accepts -g... yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking whether __attribute__((visibility())) is supported... no
checking whether /usr/bin/clang accepts -fvisibility... yes
checking whether /usr/local/bin/gfortran accepts -fvisibility... yes
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking minix/config.h usability... no
checking minix/config.h presence... no
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether we are using the GNU Objective C compiler... yes
checking whether /usr/bin/clang accepts -g... yes
checking for Objective C++ compiler... trying some possibilities
checking whether /usr/bin/clang++ can compile ObjC++... yes
/usr/bin/clang++
checking for a sed that does not truncate output... (cached) /usr/bin/sed
checking for fgrep... /usr/bin/grep -F
checking for ld used by /usr/bin/clang... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm
checking the name lister (/usr/bin/nm) interface... BSD nm
checking the maximum length of command line arguments... 196608
checking whether the shell understands some XSI constructs... yes
checking whether the shell understands "+="... yes
checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r
checking for objdump... no
checking how to recognize dependent libraries... pass_all
checking for strip... strip
checking for ranlib... ranlib
checking command to parse /usr/bin/nm output from /usr/bin/clang object... ok
checking for dsymutil... dsymutil
checking for nmedit... nmedit
checking for lipo... lipo
checking for otool... otool
checking for otool64... no
checking for -single_module linker flag... yes
checking for -exported_symbols_list linker flag... yes
checking for dlfcn.h... yes
checking whether we are using the GNU C++ compiler... (cached) yes
checking whether /usr/bin/clang++ accepts -g... (cached) yes
checking how to run the C++ preprocessor... /usr/bin/clang++ -E
checking whether we are using the GNU Fortran 77 compiler... (cached) yes
checking whether /usr/local/bin/gfortran accepts -g... (cached) yes
checking for objdir... .libs
checking if /usr/bin/clang supports -fno-rtti -fno-exceptions... yes
checking for /usr/bin/clang option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang static flag -static works... no
checking if /usr/bin/clang supports -c -o file.o... yes
checking if /usr/bin/clang supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin13.0.0 dyld
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for ld used by /usr/bin/clang++... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no
checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking for /usr/bin/clang++ option to produce PIC... -fno-common -DPIC
checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works... yes
checking if /usr/bin/clang++ static flag -static works... no
checking if /usr/bin/clang++ supports -c -o file.o... yes
checking if /usr/bin/clang++ supports -c -o file.o... (cached) yes
checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin13.0.0 dyld
checking how to hardcode library paths into programs... immediate
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... no
checking for /usr/local/bin/gfortran option to produce PIC... -fno-common
checking if /usr/local/bin/gfortran PIC flag -fno-common works... yes
checking if /usr/local/bin/gfortran static flag -static works... no
checking if /usr/local/bin/gfortran supports -c -o file.o... yes
checking if /usr/local/bin/gfortran supports -c -o file.o... (cached) yes
checking whether the /usr/local/bin/gfortran linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes
checking dynamic linker characteristics... darwin13.0.0 dyld
checking how to hardcode library paths into programs... immediate
checking for sin in -lm... yes
checking for library containing dlopen... none required
checking readline/history.h usability... yes
checking readline/history.h presence... yes
checking for readline/history.h... yes
checking readline/readline.h usability... yes
checking readline/readline.h presence... yes
checking for readline/readline.h... yes
checking for rl_callback_read_char in -lreadline... yes
checking for history_truncate_file... yes
checking whether rl_completion_matches exists and is declared... yes
checking for ANSI C header files... (cached) yes
checking for dirent.h that defines DIR... yes
checking for library containing opendir... none required
checking for sys/wait.h that is POSIX.1 compatible... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking dl.h usability... no
checking dl.h presence... no
checking for dl.h... no
checking for dlfcn.h... (cached) yes
checking elf.h usability... no
checking elf.h presence... no
checking for elf.h... no
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking floatingpoint.h usability... no
checking floatingpoint.h presence... no
checking for floatingpoint.h... no
checking fpu_control.h usability... no
checking fpu_control.h presence... no
checking for fpu_control.h... no
checking glob.h usability... yes
checking glob.h presence... yes
checking for glob.h... yes
checking grp.h usability... yes
checking grp.h presence... yes
checking for grp.h... yes
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking pwd.h usability... yes
checking pwd.h presence... yes
checking for pwd.h... yes
checking sched.h usability... yes
checking sched.h presence... yes
checking for sched.h... yes
checking for strings.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/resource.h usability... yes
checking sys/resource.h presence... yes
checking for sys/resource.h... yes
checking sys/select.h usability... yes
checking sys/select.h presence... yes
checking for sys/select.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking for sys/stat.h... (cached) yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking sys/times.h usability... yes
checking sys/times.h presence... yes
checking for sys/times.h... yes
checking sys/utsname.h usability... yes
checking sys/utsname.h presence... yes
checking for sys/utsname.h... yes
checking for unistd.h... (cached) yes
checking utime.h usability... yes
checking utime.h presence... yes
checking for utime.h... yes
checking errno.h usability... yes
checking errno.h presence... yes
checking for errno.h... yes
checking for inttypes.h... (cached) yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking stdarg.h usability... yes
checking stdarg.h presence... yes
checking for stdarg.h... yes
checking stdbool.h usability... yes
checking stdbool.h presence... yes
checking for stdbool.h... yes
checking for stdint.h... (cached) yes
checking for string.h... (cached) yes
checking whether setjmp.h is POSIX.1 compatible... yes
checking whether sigsetjmp is declared... yes
checking whether siglongjmp is declared... yes
checking for GNU C library with version >= 2... no
checking return type of signal handlers... void
checking for uint64_t... yes
checking for int64_t... yes
checking for int_fast64_t... yes
checking for pid_t... yes
checking for size_t... yes
checking whether SIZE_MAX is declared... yes
checking for blkcnt_t... yes
checking for type of socket length... socklen_t *
checking for stack_t... yes
checking for intptr_t... yes
checking for uintptr_t... yes
checking whether byte ordering is bigendian... no
checking for an ANSI C-conforming const... yes
checking for /usr/bin/clang option to accept ISO C99... none needed
checking for /usr/bin/clang option to accept ISO Standard C... (cached) none needed
checking for inline... inline
checking size of int... 4
checking size of long... 8
checking size of long long... 8
checking size of double... 8
checking size of size_t... 8
checking size of long double... 16
checking whether we can compute C Make dependencies... yes, using $(CC) -MM
checking whether /usr/bin/clang supports -c -o FILE.lo... yes
checking for /usr/bin/clang option to support OpenMP... unsupported
checking how to get verbose linking output from /usr/local/bin/gfortran... configure: WARNING: compilation failed
checking for Fortran 77 libraries of /usr/local/bin/gfortran...
checking how to get verbose linking output from /usr/bin/clang... -v
checking for C libraries of /usr/bin/clang... -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/lib/darwin/libclang_rt.osx.a
checking for dummy main to link with Fortran 77 libraries... none
checking for Fortran 77 name-mangling scheme... configure: error: in `/private/tmp/r-R19N/R-3.0.2':
configure: error: cannot compile a simple Fortran program
See `config.log' for more details
HOMEBREW_VERSION: 0.9.5
HEAD: e510154998c2c8e85d7390d83c12b1ebe5b25d21
CPU: dual-core 64-bit penryn
OS X: 10.9.1-x86_64
Xcode: 5.0.2
CLT: 5.0.1.0.1.1382131676
X11: 2.7.5 => /opt/X11
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by R configure 3.0.2, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/usr/local/Cellar/r/3.0.2 --with-aqua --enable-R-framework --with-lapack
## --------- ##
## Platform. ##
## --------- ##
hostname = Old-Nigga.local
uname -m = x86_64
uname -r = 13.0.0
uname -s = Darwin
uname -v = Darwin Kernel Version 13.0.0: Thu Sep 19 22:22:27 PDT 2013; root:xnu-2422.1.72~6/RELEASE_X86_64
/usr/bin/uname -p = i386
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = Mach kernel version:
Darwin Kernel Version 13.0.0: Thu Sep 19 22:22:27 PDT 2013; root:xnu-2422.1.72~6/RELEASE_X86_64
Kernel configured for up to 2 processors.
2 processors are physically available.
2 processors are logically available.
Processor type: i486 (Intel 80486)
Processors active: 0 1
Primary memory available: 6.00 gigabytes
Default processor set: 229 tasks, 1140 threads, 2 processors
Load average: 3.98, Mach factor: 0.52
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /Users/bonkey/.rvm/gems/ruby-2.0.0-p353/bin
PATH: /Users/bonkey/.rvm/gems/ruby-2.0.0-p353@global/bin
PATH: /Users/bonkey/.rvm/rubies/ruby-2.0.0-p353/bin
PATH: /usr/local/heroku/bin
PATH: /usr/local/bin
PATH: /usr/local/sbin
PATH: /Users/bonkey/bin
PATH: /Users/bonkey/Dropbox/HOME/bin
PATH: /Users/bonkey/.go/bin
PATH: /usr/bin
PATH: /bin
PATH: /usr/sbin
PATH: /sbin
PATH: /Users/bonkey/.rvm/bin
PATH: /usr/local/Library/Contributions/cmd
PATH: /opt/X11/bin
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3638: checking build system type
configure:3652: result: x86_64-apple-darwin13.0.0
configure:3672: checking host system type
configure:3685: result: x86_64-apple-darwin13.0.0
configure:4380: checking for pwd
configure:4398: found /bin/pwd
configure:4411: result: /bin/pwd
configure:4419: checking whether builddir is srcdir
configure:4427: result: yes
configure:4432: checking for working aclocal
configure:4436: result: found
configure:4445: checking for working autoconf
configure:4449: result: found
configure:4458: checking for working automake
configure:4462: result: found
configure:4471: checking for working autoheader
configure:4475: result: found
configure:4488: checking for gawk
configure:4518: result: no
configure:4488: checking for mawk
configure:4518: result: no
configure:4488: checking for nawk
configure:4518: result: no
configure:4488: checking for awk
configure:4504: found /usr/bin/awk
configure:4515: result: awk
configure:4526: checking whether ln -s works
configure:4530: result: yes
configure:4541: checking for bison
configure:4557: found /usr/bin/bison
configure:4568: result: bison -y
configure:4584: checking for ar
configure:4600: found /usr/bin/ar
configure:4611: result: ar
configure:4639: checking for a BSD-compatible install
configure:4707: result: /usr/bin/install -c
configure:4742: checking for sed
configure:4761: found /usr/bin/sed
configure:4773: result: /usr/bin/sed
configure:4791: checking for which
configure:4809: found /usr/bin/which
configure:4821: result: /usr/bin/which
configure:4841: checking for less
configure:4859: found /usr/bin/less
configure:4871: result: /usr/bin/less
configure:4894: checking for gtar
configure:4927: result: no
configure:4894: checking for gnutar
configure:4927: result: no
configure:4894: checking for tar
configure:4912: found /usr/bin/tar
configure:4924: result: /usr/bin/tar
configure:4946: checking for tex
configure:4979: result: no
configure:4991: checking for pdftex
configure:5024: result: no
configure:5034: WARNING: you cannot build PDF versions of the R manuals
configure:5041: checking for pdflatex
configure:5074: result: no
configure:5084: WARNING: you cannot build PDF versions of vignettes and help pages
configure:5091: checking for makeindex
configure:5124: result: no
configure:5136: checking for makeinfo
configure:5154: found /usr/bin/makeinfo
configure:5166: result: /usr/bin/makeinfo
configure:5178: checking whether makeinfo version is at least 4.7
configure:5200: result: yes
configure:5207: checking for ginstall-info
configure:5240: result: no
configure:5207: checking for install-info
configure:5225: found /usr/bin/install-info
configure:5237: result: /usr/bin/install-info
configure:5269: checking for texi2dvi
configure:5287: found /usr/bin/texi2dvi
configure:5299: result: /usr/bin/texi2dvi
configure:5319: checking for kpsewhich
configure:5352: result: no
configure:5386: checking for unzip
configure:5404: found /usr/bin/unzip
configure:5416: result: /usr/bin/unzip
configure:5432: checking for zip
configure:5450: found /usr/bin/zip
configure:5462: result: /usr/bin/zip
configure:5478: checking for gzip
configure:5496: found /usr/bin/gzip
configure:5508: result: /usr/bin/gzip
configure:5524: checking for bzip2
configure:5542: found /usr/bin/bzip2
configure:5554: result: /usr/bin/bzip2
configure:5572: checking for firefox
configure:5605: result: no
configure:5572: checking for mozilla
configure:5605: result: no
configure:5572: checking for galeon
configure:5605: result: no
configure:5572: checking for opera
configure:5605: result: no
configure:5572: checking for xdg-open
configure:5605: result: no
configure:5572: checking for kfmclient
configure:5605: result: no
configure:5572: checking for gnome-moz-remote
configure:5605: result: no
configure:5572: checking for open
configure:5590: found /usr/bin/open
configure:5602: result: /usr/bin/open
configure:5619: result: using default browser ... /usr/bin/open
configure:5629: checking for acroread
configure:5662: result: no
configure:5629: checking for acroread4
configure:5662: result: no
configure:5629: checking for xdg-open
configure:5662: result: no
configure:5629: checking for evince
configure:5662: result: no
configure:5629: checking for xpdf
configure:5662: result: no
configure:5629: checking for gv
configure:5662: result: no
configure:5629: checking for gnome-gv
configure:5662: result: no
configure:5629: checking for ggv
configure:5662: result: no
configure:5629: checking for okular
configure:5662: result: no
configure:5629: checking for kpdf
configure:5662: result: no
configure:5629: checking for open
configure:5647: found /usr/bin/open
configure:5659: result: /usr/bin/open
configure:5680: checking for notangle
configure:5711: result: false
configure:5722: checking for realpath
configure:5753: result: false
configure:5766: checking for pkg-config
configure:5785: found /usr/local/bin/pkg-config
configure:5797: result: /usr/local/bin/pkg-config
configure:5854: checking for gcc
configure:5881: result: /usr/bin/clang
configure:6110: checking for C compiler version
configure:6119: /usr/bin/clang --version >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:6130: $? = 0
configure:6119: /usr/bin/clang -v >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:6130: $? = 0
configure:6119: /usr/bin/clang -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:6130: $? = 1
configure:6119: /usr/bin/clang -qversion >&5
clang: error: no input files
configure:6130: $? = 1
configure:6150: checking whether the C compiler works
configure:6172: /usr/bin/clang -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c >&5
configure:6176: $? = 0
configure:6224: result: yes
configure:6227: checking for C compiler default output file name
configure:6229: result: a.out
configure:6235: checking for suffix of executables
configure:6242: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c >&5
configure:6246: $? = 0
configure:6268: result:
configure:6290: checking whether we are cross compiling
configure:6298: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c >&5
configure:6302: $? = 0
configure:6309: ./conftest
configure:6313: $? = 0
configure:6328: result: no
configure:6333: checking for suffix of object files
configure:6355: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:6359: $? = 0
configure:6380: result: o
configure:6384: checking whether we are using the GNU C compiler
configure:6403: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:6403: $? = 0
configure:6412: result: yes
configure:6421: checking whether /usr/bin/clang accepts -g
configure:6441: /usr/bin/clang -c -g -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:6441: $? = 0
configure:6482: result: yes
configure:6499: checking for /usr/bin/clang option to accept ISO C89
configure:6562: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:6562: $? = 0
configure:6575: result: none needed
configure:6602: checking how to run the C preprocessor
configure:6633: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:6633: $? = 0
configure:6647: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6647: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6672: result: /usr/bin/clang -E
configure:6692: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:6692: $? = 0
configure:6706: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:6706: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:6735: checking for grep that handles long lines and -e
configure:6793: result: /usr/bin/grep
configure:6798: checking for egrep
configure:6860: result: /usr/bin/grep -E
configure:6866: checking whether /usr/bin/clang needs -traditional
conftest.c:17:10: fatal error: 'termio.h' file not found
#include <termio.h>
^
1 error generated.
configure:6900: result: no
configure:6912: checking how to run the C preprocessor
configure:6982: result: /usr/bin/clang -E
configure:7002: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:7002: $? = 0
configure:7016: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7016: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7088: result: defining F77 to be /usr/local/bin/gfortran
configure:7260: checking for Fortran 77 compiler version
configure:7269: /usr/local/bin/gfortran --version >&5
GNU Fortran (GCC) 4.8.2
Copyright (C) 2013 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:7280: $? = 0
configure:7269: /usr/local/bin/gfortran -v >&5
Using built-in specs.
COLLECT_GCC=/usr/local/bin/gfortran
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gfortran/4.8.2/gfortran/libexec/gcc/x86_64-apple-darwin13.0.0/4.8.2/lto-wrapper
Target: x86_64-apple-darwin13.0.0
Configured with: ../configure --prefix=/usr/local/Cellar/gfortran/4.8.2/gfortran --datarootdir=/usr/local/Cellar/gfortran/4.8.2/share --bindir=/usr/local/Cellar/gfortran/4.8.2/bin --enable-languages=fortran --with-system-zlib --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --with-cloog=/usr/local/opt/cloog --with-isl=/usr/local/opt/isl --disable-cloog-version-check --disable-isl-version-check --enable-checking=release --disable-stage1-checking --disable-libstdcxx --enable-lto --disable-nls --disable-multilib
Thread model: posix
gcc version 4.8.2 (GCC)
configure:7280: $? = 0
configure:7269: /usr/local/bin/gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:7280: $? = 1
configure:7269: /usr/local/bin/gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:7280: $? = 1
configure:7289: checking whether we are using the GNU Fortran 77 compiler
configure:7302: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 conftest.F >&5
configure:7302: $? = 0
configure:7311: result: yes
configure:7317: checking whether /usr/local/bin/gfortran accepts -g
configure:7328: /usr/local/bin/gfortran -c -g conftest.f >&5
configure:7328: $? = 0
configure:7336: result: yes
configure:7481: checking for C++ compiler version
configure:7490: /usr/bin/clang++ --version >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:7501: $? = 0
configure:7490: /usr/bin/clang++ -v >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:7501: $? = 0
configure:7490: /usr/bin/clang++ -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:7501: $? = 1
configure:7490: /usr/bin/clang++ -qversion >&5
clang: error: no input files
configure:7501: $? = 1
configure:7505: checking whether we are using the GNU C++ compiler
configure:7524: /usr/bin/clang++ -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp >&5
configure:7524: $? = 0
configure:7533: result: yes
configure:7542: checking whether /usr/bin/clang++ accepts -g
configure:7562: /usr/bin/clang++ -c -g -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp >&5
configure:7562: $? = 0
configure:7603: result: yes
configure:7631: checking how to run the C++ preprocessor
configure:7658: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp
configure:7658: $? = 0
configure:7672: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7672: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7697: result: /usr/bin/clang++ -E
configure:7717: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp
configure:7717: $? = 0
configure:7731: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp
conftest.cpp:17:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:7731: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:7765: checking whether __attribute__((visibility())) is supported
configure:7776: /usr/bin/clang -Werror -S conftest.c -o conftest.s 1>&5
configure:7779: $? = 0
configure:7788: result: no
configure:7799: checking whether /usr/bin/clang accepts -fvisibility
configure:7815: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -fvisibility=hidden -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:7815: $? = 0
configure:7822: result: yes
configure:7847: checking whether /usr/local/bin/gfortran accepts -fvisibility
configure:7857: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 -fvisibility=hidden conftest.f >&5
configure:7857: $? = 0
configure:7864: result: yes
configure:7887: checking for ANSI C header files
configure:7907: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:7907: $? = 0
configure:7980: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c >&5
configure:7980: $? = 0
configure:7980: ./conftest
configure:7980: $? = 0
configure:7991: result: yes
configure:8004: checking for sys/types.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for sys/stat.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for stdlib.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for string.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for memory.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for strings.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for inttypes.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for stdint.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8004: checking for unistd.h
configure:8004: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8004: $? = 0
configure:8004: result: yes
configure:8017: checking minix/config.h usability
configure:8017: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:60:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:8017: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <minix/config.h>
configure:8017: result: no
configure:8017: checking minix/config.h presence
configure:8017: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:27:10: fatal error: 'minix/config.h' file not found
#include <minix/config.h>
^
1 error generated.
configure:8017: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| /* end confdefs.h. */
| #include <minix/config.h>
configure:8017: result: no
configure:8017: checking for minix/config.h
configure:8017: result: no
configure:8038: checking whether it is safe to define __EXTENSIONS__
configure:8056: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:8056: $? = 0
configure:8063: result: yes
configure:8185: checking for Objective C compiler version
configure:8194: /usr/bin/clang --version >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:8205: $? = 0
configure:8194: /usr/bin/clang -v >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:8205: $? = 0
configure:8194: /usr/bin/clang -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:8205: $? = 1
configure:8194: /usr/bin/clang -qversion >&5
clang: error: no input files
configure:8205: $? = 1
configure:8209: checking whether we are using the GNU Objective C compiler
configure:8228: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.m >&5
configure:8228: $? = 0
configure:8237: result: yes
configure:8246: checking whether /usr/bin/clang accepts -g
configure:8266: /usr/bin/clang -c -g -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.m >&5
configure:8266: $? = 0
configure:8307: result: yes
configure:8366: checking for Objective C++ compiler
configure:8372: result: trying some possibilities
configure:8375: checking whether /usr/bin/clang++ can compile ObjC++
running: /usr/bin/clang++ -c conftest.mm -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -Os -w -pipe -march=native -mmacosx-version-min=10.9
configure:8403: result: yes
configure:8507: result: /usr/bin/clang++
configure:8576: checking for a sed that does not truncate output
configure:8640: result: /usr/bin/sed
configure:8658: checking for fgrep
configure:8720: result: /usr/bin/grep -F
configure:8748: checking for ld used by /usr/bin/clang
configure:8815: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
configure:8822: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld
configure:8837: result: no
configure:8849: checking for BSD- or MS-compatible name lister (nm)
configure:8898: result: /usr/bin/nm
configure:9016: checking the name lister (/usr/bin/nm) interface
configure:9023: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:9026: /usr/bin/nm "conftest.o"
configure:9029: output
0000000000000000 S _some_variable
configure:9036: result: BSD nm
configure:9040: checking the maximum length of command line arguments
configure:9160: result: 196608
configure:9177: checking whether the shell understands some XSI constructs
configure:9187: result: yes
configure:9191: checking whether the shell understands "+="
configure:9197: result: yes
configure:9232: checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files
configure:9239: result: -r
configure:9308: checking for objdump
configure:9338: result: no
configure:9367: checking how to recognize dependent libraries
configure:9563: result: pass_all
configure:9728: checking for strip
configure:9744: found /usr/bin/strip
configure:9755: result: strip
configure:9827: checking for ranlib
configure:9843: found /usr/bin/ranlib
configure:9854: result: ranlib
configure:9944: checking command to parse /usr/bin/nm output from /usr/bin/clang object
configure:10062: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:10065: $? = 0
configure:10069: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' \> conftest.nm
configure:10072: $? = 0
cannot find nm_test_var in conftest.nm
configure:10062: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:10065: $? = 0
configure:10069: /usr/bin/nm conftest.o \| sed -n -e 's/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p' \> conftest.nm
configure:10072: $? = 0
configure:10126: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c conftstm.o >&5
configure:10129: $? = 0
configure:10167: result: ok
configure:10238: checking for dsymutil
configure:10254: found /usr/bin/dsymutil
configure:10265: result: dsymutil
configure:10330: checking for nmedit
configure:10346: found /usr/bin/nmedit
configure:10357: result: nmedit
configure:10422: checking for lipo
configure:10438: found /usr/bin/lipo
configure:10449: result: lipo
configure:10514: checking for otool
configure:10530: found /usr/bin/otool
configure:10541: result: otool
configure:10606: checking for otool64
configure:10636: result: no
configure:10681: checking for -single_module linker flag
/usr/bin/clang -Os -w -pipe -march=native -mmacosx-version-min=10.9 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib -o libconftest.dylib -dynamiclib -Wl,-single_module conftest.c
configure:10708: result: yes
configure:10710: checking for -exported_symbols_list linker flag
configure:10730: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib -Wl,-exported_symbols_list,conftest.sym conftest.c >&5
configure:10730: $? = 0
configure:10740: result: yes
configure:10779: checking for dlfcn.h
configure:10779: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:10779: $? = 0
configure:10779: result: yes
configure:10904: checking for C++ compiler version
configure:10913: /usr/bin/clang++ --version >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:10924: $? = 0
configure:10913: /usr/bin/clang++ -v >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
configure:10924: $? = 0
configure:10913: /usr/bin/clang++ -V >&5
clang: error: argument to '-V' is missing (expected 1 value)
clang: error: no input files
configure:10924: $? = 1
configure:10913: /usr/bin/clang++ -qversion >&5
clang: error: no input files
configure:10924: $? = 1
configure:10928: checking whether we are using the GNU C++ compiler
configure:10956: result: yes
configure:10965: checking whether /usr/bin/clang++ accepts -g
configure:11026: result: yes
configure:11057: checking how to run the C++ preprocessor
configure:11123: result: /usr/bin/clang++ -E
configure:11143: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp
configure:11143: $? = 0
configure:11157: /usr/bin/clang++ -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp
conftest.cpp:33:10: fatal error: 'ac_nonexistent.h' file not found
#include <ac_nonexistent.h>
^
1 error generated.
configure:11157: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <ac_nonexistent.h>
configure:11298: checking for Fortran 77 compiler version
configure:11307: /usr/local/bin/gfortran --version >&5
GNU Fortran (GCC) 4.8.2
Copyright (C) 2013 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:11318: $? = 0
configure:11307: /usr/local/bin/gfortran -v >&5
Using built-in specs.
COLLECT_GCC=/usr/local/bin/gfortran
COLLECT_LTO_WRAPPER=/usr/local/Cellar/gfortran/4.8.2/gfortran/libexec/gcc/x86_64-apple-darwin13.0.0/4.8.2/lto-wrapper
Target: x86_64-apple-darwin13.0.0
Configured with: ../configure --prefix=/usr/local/Cellar/gfortran/4.8.2/gfortran --datarootdir=/usr/local/Cellar/gfortran/4.8.2/share --bindir=/usr/local/Cellar/gfortran/4.8.2/bin --enable-languages=fortran --with-system-zlib --with-gmp=/usr/local/opt/gmp --with-mpfr=/usr/local/opt/mpfr --with-mpc=/usr/local/opt/libmpc --with-cloog=/usr/local/opt/cloog --with-isl=/usr/local/opt/isl --disable-cloog-version-check --disable-isl-version-check --enable-checking=release --disable-stage1-checking --disable-libstdcxx --enable-lto --disable-nls --disable-multilib
Thread model: posix
gcc version 4.8.2 (GCC)
configure:11318: $? = 0
configure:11307: /usr/local/bin/gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:11318: $? = 1
configure:11307: /usr/local/bin/gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:11318: $? = 1
configure:11327: checking whether we are using the GNU Fortran 77 compiler
configure:11349: result: yes
configure:11355: checking whether /usr/local/bin/gfortran accepts -g
configure:11374: result: yes
configure:11552: checking for objdir
configure:11567: result: .libs
configure:11863: checking if /usr/bin/clang supports -fno-rtti -fno-exceptions
configure:11881: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -fno-rtti -fno-exceptions conftest.c >&5
configure:11885: $? = 0
configure:11898: result: yes
configure:11918: checking for /usr/bin/clang option to produce PIC
configure:12190: result: -fno-common -DPIC
configure:12202: checking if /usr/bin/clang PIC flag -fno-common -DPIC works
configure:12220: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -fno-common -DPIC -DPIC conftest.c >&5
configure:12224: $? = 0
configure:12237: result: yes
configure:12261: checking if /usr/bin/clang static flag -static works
configure:12289: result: no
configure:12304: checking if /usr/bin/clang supports -c -o file.o
configure:12325: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -o out/conftest2.o conftest.c >&5
configure:12329: $? = 0
configure:12351: result: yes
configure:12359: checking if /usr/bin/clang supports -c -o file.o
configure:12406: result: yes
configure:12439: checking whether the /usr/bin/clang linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:13425: result: yes
configure:13664: checking dynamic linker characteristics
configure:14315: result: darwin13.0.0 dyld
configure:14417: checking how to hardcode library paths into programs
configure:14442: result: immediate
configure:14962: checking whether stripping libraries is possible
configure:14976: result: yes
configure:15002: checking if libtool supports shared libraries
configure:15004: result: yes
configure:15007: checking whether to build shared libraries
configure:15028: result: yes
configure:15031: checking whether to build static libraries
configure:15035: result: no
configure:15178: checking for ld used by /usr/bin/clang++
configure:15245: result: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
configure:15252: checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld
configure:15267: result: no
configure:15322: checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:16235: result: yes
configure:16263: /usr/bin/clang++ -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.cpp >&5
configure:16266: $? = 0
configure:16448: checking for /usr/bin/clang++ option to produce PIC
configure:16765: result: -fno-common -DPIC
configure:16774: checking if /usr/bin/clang++ PIC flag -fno-common -DPIC works
configure:16792: /usr/bin/clang++ -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -fno-common -DPIC -DPIC conftest.cpp >&5
configure:16796: $? = 0
configure:16809: result: yes
configure:16830: checking if /usr/bin/clang++ static flag -static works
configure:16858: result: no
configure:16870: checking if /usr/bin/clang++ supports -c -o file.o
configure:16891: /usr/bin/clang++ -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -o out/conftest2.o conftest.cpp >&5
configure:16895: $? = 0
configure:16917: result: yes
configure:16922: checking if /usr/bin/clang++ supports -c -o file.o
configure:16969: result: yes
configure:16999: checking whether the /usr/bin/clang++ linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:17025: result: yes
configure:17162: checking dynamic linker characteristics
configure:17761: result: darwin13.0.0 dyld
configure:17812: checking how to hardcode library paths into programs
configure:17837: result: immediate
configure:17978: checking if libtool supports shared libraries
configure:17980: result: yes
configure:17983: checking whether to build shared libraries
configure:18003: result: yes
configure:18006: checking whether to build static libraries
configure:18010: result: no
configure:18024: checking for /usr/local/bin/gfortran option to produce PIC
configure:18296: result: -fno-common
configure:18305: checking if /usr/local/bin/gfortran PIC flag -fno-common works
configure:18323: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 -fno-common conftest.f >&5
configure:18327: $? = 0
configure:18340: result: yes
configure:18361: checking if /usr/local/bin/gfortran static flag -static works
configure:18389: result: no
configure:18401: checking if /usr/local/bin/gfortran supports -c -o file.o
configure:18422: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 -o out/conftest2.o conftest.f >&5
configure:18426: $? = 0
configure:18448: result: yes
configure:18453: checking if /usr/local/bin/gfortran supports -c -o file.o
configure:18500: result: yes
configure:18530: checking whether the /usr/local/bin/gfortran linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries
configure:19503: result: yes
configure:19640: checking dynamic linker characteristics
configure:20233: result: darwin13.0.0 dyld
configure:20284: checking how to hardcode library paths into programs
configure:20309: result: immediate
configure:20613: checking for sin in -lm
configure:20638: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:20638: $? = 0
configure:20647: result: yes
configure:20661: checking for library containing dlopen
configure:20692: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:20692: $? = 0
configure:20709: result: none required
configure:20822: checking readline/history.h usability
configure:20822: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:20822: $? = 0
configure:20822: result: yes
configure:20822: checking readline/history.h presence
configure:20822: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:20822: $? = 0
configure:20822: result: yes
configure:20822: checking for readline/history.h
configure:20822: result: yes
configure:20822: checking readline/readline.h usability
configure:20822: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:20822: $? = 0
configure:20822: result: yes
configure:20822: checking readline/readline.h presence
configure:20822: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:20822: $? = 0
configure:20822: result: yes
configure:20822: checking for readline/readline.h
configure:20822: result: yes
configure:20836: checking for rl_callback_read_char in -lreadline
configure:20861: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lreadline >&5
configure:20861: $? = 0
configure:20870: result: yes
configure:21054: checking for history_truncate_file
configure:21054: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lreadline >&5
configure:21054: $? = 0
configure:21054: result: yes
configure:21069: checking whether rl_completion_matches exists and is declared
configure:21091: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lreadline >&5
configure:21091: $? = 0
configure:21100: result: yes
configure:21118: checking for ANSI C header files
configure:21222: result: yes
configure:21233: checking for dirent.h that defines DIR
configure:21252: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21252: $? = 0
configure:21260: result: yes
configure:21273: checking for library containing opendir
configure:21304: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:21304: $? = 0
configure:21321: result: none required
configure:21392: checking for sys/wait.h that is POSIX.1 compatible
configure:21418: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21418: $? = 0
configure:21425: result: yes
configure:21452: checking arpa/inet.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking arpa/inet.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for arpa/inet.h
configure:21452: result: yes
configure:21452: checking dl.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:77:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <dl.h>
configure:21452: result: no
configure:21452: checking dl.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:44:10: fatal error: 'dl.h' file not found
#include <dl.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| /* end confdefs.h. */
| #include <dl.h>
configure:21452: result: no
configure:21452: checking for dl.h
configure:21452: result: no
configure:21452: checking for dlfcn.h
configure:21452: result: yes
configure:21452: checking elf.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:78:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <elf.h>
configure:21452: result: no
configure:21452: checking elf.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:45:10: fatal error: 'elf.h' file not found
#include <elf.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| /* end confdefs.h. */
| #include <elf.h>
configure:21452: result: no
configure:21452: checking for elf.h
configure:21452: result: no
configure:21452: checking fcntl.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking fcntl.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for fcntl.h
configure:21452: result: yes
configure:21452: checking floatingpoint.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:79:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <floatingpoint.h>
configure:21452: result: no
configure:21452: checking floatingpoint.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:46:10: fatal error: 'floatingpoint.h' file not found
#include <floatingpoint.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <floatingpoint.h>
configure:21452: result: no
configure:21452: checking for floatingpoint.h
configure:21452: result: no
configure:21452: checking fpu_control.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:79:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| #include <fpu_control.h>
configure:21452: result: no
configure:21452: checking fpu_control.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
conftest.c:46:10: fatal error: 'fpu_control.h' file not found
#include <fpu_control.h>
^
1 error generated.
configure:21452: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| /* end confdefs.h. */
| #include <fpu_control.h>
configure:21452: result: no
configure:21452: checking for fpu_control.h
configure:21452: result: no
configure:21452: checking glob.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking glob.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for glob.h
configure:21452: result: yes
configure:21452: checking grp.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking grp.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for grp.h
configure:21452: result: yes
configure:21452: checking netdb.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking netdb.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for netdb.h
configure:21452: result: yes
configure:21452: checking netinet/in.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking netinet/in.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for netinet/in.h
configure:21452: result: yes
configure:21452: checking pwd.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking pwd.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for pwd.h
configure:21452: result: yes
configure:21452: checking sched.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sched.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sched.h
configure:21452: result: yes
configure:21452: checking for strings.h
configure:21452: result: yes
configure:21452: checking sys/param.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/param.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/param.h
configure:21452: result: yes
configure:21452: checking sys/resource.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/resource.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/resource.h
configure:21452: result: yes
configure:21452: checking sys/select.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/select.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/select.h
configure:21452: result: yes
configure:21452: checking sys/socket.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/socket.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/socket.h
configure:21452: result: yes
configure:21452: checking for sys/stat.h
configure:21452: result: yes
configure:21452: checking sys/time.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/time.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/time.h
configure:21452: result: yes
configure:21452: checking sys/times.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/times.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/times.h
configure:21452: result: yes
configure:21452: checking sys/utsname.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking sys/utsname.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for sys/utsname.h
configure:21452: result: yes
configure:21452: checking for unistd.h
configure:21452: result: yes
configure:21452: checking utime.h usability
configure:21452: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking utime.h presence
configure:21452: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21452: $? = 0
configure:21452: result: yes
configure:21452: checking for utime.h
configure:21452: result: yes
configure:21470: checking errno.h usability
configure:21470: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking errno.h presence
configure:21470: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking for errno.h
configure:21470: result: yes
configure:21470: checking for inttypes.h
configure:21470: result: yes
configure:21470: checking limits.h usability
configure:21470: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking limits.h presence
configure:21470: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking for limits.h
configure:21470: result: yes
configure:21470: checking locale.h usability
configure:21470: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking locale.h presence
configure:21470: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking for locale.h
configure:21470: result: yes
configure:21470: checking stdarg.h usability
configure:21470: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking stdarg.h presence
configure:21470: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking for stdarg.h
configure:21470: result: yes
configure:21470: checking stdbool.h usability
configure:21470: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking stdbool.h presence
configure:21470: /usr/bin/clang -E -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c
configure:21470: $? = 0
configure:21470: result: yes
configure:21470: checking for stdbool.h
configure:21470: result: yes
configure:21470: checking for stdint.h
configure:21470: result: yes
configure:21470: checking for string.h
configure:21470: result: yes
configure:21483: checking whether setjmp.h is POSIX.1 compatible
configure:21501: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21501: $? = 0
configure:21508: result: yes
configure:21510: checking whether sigsetjmp is declared
configure:21510: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21510: $? = 0
configure:21510: result: yes
configure:21521: checking whether siglongjmp is declared
configure:21521: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21521: $? = 0
configure:21521: result: yes
configure:21545: checking for GNU C library with version >= 2
configure:21568: result: no
configure:21579: checking return type of signal handlers
configure:21597: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:80:8: error: indirection requires pointer operand ('void' invalid)
return *(signal (0, 0)) (0) == 1;
^~~~~~~~~~~~~~~~~~~~
1 error generated.
configure:21597: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <signal.h>
|
| int
| main ()
| {
| return *(signal (0, 0)) (0) == 1;
| ;
| return 0;
| }
configure:21604: result: void
configure:21613: checking for uint64_t
configure:21613: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21613: $? = 0
configure:21613: result: yes
configure:21627: checking for int64_t
configure:21627: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21627: $? = 0
configure:21627: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:111:22: error: expected expression
if (sizeof ((int64_t)))
^
1 error generated.
configure:21627: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((int64_t)))
| return 0;
| ;
| return 0;
| }
configure:21627: result: yes
configure:21636: checking for int_fast64_t
configure:21636: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21636: $? = 0
configure:21636: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:112:27: error: expected expression
if (sizeof ((int_fast64_t)))
^
1 error generated.
configure:21636: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((int_fast64_t)))
| return 0;
| ;
| return 0;
| }
configure:21636: result: yes
configure:21646: checking for pid_t
configure:21646: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21646: $? = 0
configure:21646: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:113:20: error: expected expression
if (sizeof ((pid_t)))
^
1 error generated.
configure:21646: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((pid_t)))
| return 0;
| ;
| return 0;
| }
configure:21646: result: yes
configure:21657: checking for size_t
configure:21657: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21657: $? = 0
configure:21657: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:113:21: error: expected expression
if (sizeof ((size_t)))
^
1 error generated.
configure:21657: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((size_t)))
| return 0;
| ;
| return 0;
| }
configure:21657: result: yes
configure:21668: checking whether SIZE_MAX is declared
configure:21701: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:21701: $? = 0
configure:21701: ./conftest
configure:21701: $? = 0
configure:21711: result: yes
configure:21719: checking for blkcnt_t
configure:21719: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21719: $? = 0
configure:21719: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:114:23: error: expected expression
if (sizeof ((blkcnt_t)))
^
1 error generated.
configure:21719: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| /* end confdefs.h. */
| #include <stdio.h>
| #ifdef HAVE_SYS_TYPES_H
| # include <sys/types.h>
| #endif
| #ifdef HAVE_SYS_STAT_H
| # include <sys/stat.h>
| #endif
| #ifdef STDC_HEADERS
| # include <stdlib.h>
| # include <stddef.h>
| #else
| # ifdef HAVE_STDLIB_H
| # include <stdlib.h>
| # endif
| #endif
| #ifdef HAVE_STRING_H
| # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
| # include <memory.h>
| # endif
| # include <string.h>
| #endif
| #ifdef HAVE_STRINGS_H
| # include <strings.h>
| #endif
| #ifdef HAVE_INTTYPES_H
| # include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| # include <stdint.h>
| #endif
| #ifdef HAVE_UNISTD_H
| # include <unistd.h>
| #endif
| int
| main ()
| {
| if (sizeof ((blkcnt_t)))
| return 0;
| ;
| return 0;
| }
configure:21719: result: yes
configure:21731: checking for type of socket length
configure:21757: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21757: $? = 0
configure:21777: result: socklen_t *
configure:21786: checking for stack_t
configure:21786: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21786: $? = 0
configure:21786: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:84:22: error: expected expression
if (sizeof ((stack_t)))
^
1 error generated.
configure:21786: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| /* end confdefs.h. */
| #include <signal.h>
|
| int
| main ()
| {
| if (sizeof ((stack_t)))
| return 0;
| ;
| return 0;
| }
configure:21786: result: yes
configure:21802: checking for intptr_t
configure:21802: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21802: $? = 0
configure:21802: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:90:23: error: expected expression
if (sizeof ((intptr_t)))
^
1 error generated.
configure:21802: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((intptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21802: result: yes
configure:21817: checking for uintptr_t
configure:21817: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21817: $? = 0
configure:21817: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:91:24: error: expected expression
if (sizeof ((uintptr_t)))
^
1 error generated.
configure:21817: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| /* end confdefs.h. */
| #ifdef HAVE_INTTYPES_H
| #include <inttypes.h>
| #endif
| #ifdef HAVE_STDINT_H
| #include <stdint.h>
| #endif
|
| int
| main ()
| {
| if (sizeof ((uintptr_t)))
| return 0;
| ;
| return 0;
| }
configure:21817: result: yes
configure:21840: checking whether byte ordering is bigendian
configure:21863: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:21863: $? = 0
configure:21881: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
conftest.c:89:2: error: use of undeclared identifier 'not'
not big endian
^
1 error generated.
configure:21881: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| /* end confdefs.h. */
| #include <sys/types.h>
| #include <sys/param.h>
|
| int
| main ()
| {
| #if BYTE_ORDER != BIG_ENDIAN
| not big endian
| #endif
|
| ;
| return 0;
| }
configure:21955: result: no
configure:21969: checking for an ANSI C-conforming const
configure:22035: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:22035: $? = 0
configure:22042: result: yes
configure:22054: checking for /usr/bin/clang option to accept ISO C99
configure:22203: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:22203: $? = 0
configure:22216: result: none needed
configure:22324: checking for /usr/bin/clang option to accept ISO Standard C
configure:22335: result: none needed
configure:22342: checking for inline
configure:22357: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:22357: $? = 0
configure:22364: result: inline
configure:22380: checking size of int
configure:22385: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:22385: $? = 0
configure:22385: ./conftest
configure:22385: $? = 0
configure:22399: result: 4
configure:22421: checking size of long
configure:22426: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:22426: $? = 0
configure:22426: ./conftest
configure:22426: $? = 0
configure:22440: result: 8
configure:22454: checking size of long long
configure:22459: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:22459: $? = 0
configure:22459: ./conftest
configure:22459: $? = 0
configure:22473: result: 8
configure:22487: checking size of double
configure:22492: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:22492: $? = 0
configure:22492: ./conftest
configure:22492: $? = 0
configure:22506: result: 8
configure:22520: checking size of size_t
configure:22525: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:22525: $? = 0
configure:22525: ./conftest
configure:22525: $? = 0
configure:22539: result: 8
configure:22569: checking size of long double
configure:22574: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:22574: $? = 0
configure:22574: ./conftest
configure:22574: $? = 0
configure:22588: result: 16
configure:22604: checking whether we can compute C Make dependencies
configure:22642: result: yes, using $(CC) -MM
configure:22666: checking whether /usr/bin/clang supports -c -o FILE.lo
configure:22676: /usr/bin/clang -Os -w -pipe -march=native -mmacosx-version-min=10.9 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22679: $? = 0
configure:22682: /usr/bin/clang -Os -w -pipe -march=native -mmacosx-version-min=10.9 -c conftest.c -o TMP/conftest.lo 1>&5
configure:22685: $? = 0
configure:22693: result: yes
configure:22722: checking for /usr/bin/clang option to support OpenMP
configure:22737: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22737: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -fopenmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -xopenmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
clang: error: language not recognized: 'openmp'
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -openmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -mp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -omp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -qsmp=omp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -homp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -Popenmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
conftest.c:93:2: error: unknown type name 'choke'
choke me
^
conftest.c:95:10: fatal error: 'omp.h' file not found
#include <omp.h>
^
2 errors generated.
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22755: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 --openmp -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
clang: error: unsupported option '--openmp'
configure:22755: $? = 1
configure: failed program was:
| /* confdefs.h */
| #define PACKAGE_NAME "R"
| #define PACKAGE_TARNAME "R"
| #define PACKAGE_VERSION "3.0.2"
| #define PACKAGE_STRING "R 3.0.2"
| #define PACKAGE_BUGREPORT "http://bugs.r-project.org"
| #define PACKAGE_URL "http://www.r-project.org"
| #define PACKAGE "R"
| #define VERSION "3.0.2"
| #define R_PLATFORM "x86_64-apple-darwin13.0.0"
| #define R_CPU "x86_64"
| #define R_VENDOR "apple"
| #define R_OS "darwin13.0.0"
| #define Unix 1
| #define R_ARCH ""
| #define STDC_HEADERS 1
| #define HAVE_SYS_TYPES_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_STDLIB_H 1
| #define HAVE_STRING_H 1
| #define HAVE_MEMORY_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_UNISTD_H 1
| #define __EXTENSIONS__ 1
| #define _ALL_SOURCE 1
| #define _GNU_SOURCE 1
| #define _POSIX_PTHREAD_SEMANTICS 1
| #define _TANDEM_SOURCE 1
| #define HAVE_DLFCN_H 1
| #define LT_OBJDIR ".libs/"
| #define HAVE_LIBM 1
| #define HAVE_READLINE_HISTORY_H 1
| #define HAVE_READLINE_READLINE_H 1
| #define HAVE_LIBREADLINE 1
| #define HAVE_HISTORY_TRUNCATE_FILE 1
| #define HAVE_RL_COMPLETION_MATCHES 1
| #define STDC_HEADERS 1
| #define HAVE_DIRENT_H 1
| #define HAVE_SYS_WAIT_H 1
| #define HAVE_ARPA_INET_H 1
| #define HAVE_DLFCN_H 1
| #define HAVE_FCNTL_H 1
| #define HAVE_GLOB_H 1
| #define HAVE_GRP_H 1
| #define HAVE_NETDB_H 1
| #define HAVE_NETINET_IN_H 1
| #define HAVE_PWD_H 1
| #define HAVE_SCHED_H 1
| #define HAVE_STRINGS_H 1
| #define HAVE_SYS_PARAM_H 1
| #define HAVE_SYS_RESOURCE_H 1
| #define HAVE_SYS_SELECT_H 1
| #define HAVE_SYS_SOCKET_H 1
| #define HAVE_SYS_STAT_H 1
| #define HAVE_SYS_TIME_H 1
| #define HAVE_SYS_TIMES_H 1
| #define HAVE_SYS_UTSNAME_H 1
| #define HAVE_UNISTD_H 1
| #define HAVE_UTIME_H 1
| #define HAVE_ERRNO_H 1
| #define HAVE_INTTYPES_H 1
| #define HAVE_LIMITS_H 1
| #define HAVE_LOCALE_H 1
| #define HAVE_STDARG_H 1
| #define HAVE_STDBOOL_H 1
| #define HAVE_STDINT_H 1
| #define HAVE_STRING_H 1
| #define HAVE_DECL_SIGSETJMP 1
| #define HAVE_DECL_SIGLONGJMP 1
| #define HAVE_POSIX_SETJMP 1
| #define RETSIGTYPE void
| #define HAVE_INT64_T 1
| #define HAVE_INT_FAST64_T 1
| #define HAVE_DECL_SIZE_MAX 1
| #define R_SOCKLEN_T socklen_t
| #define HAVE_STACK_T 1
| #define HAVE_INTPTR_T 1
| #define HAVE_UINTPTR_T 1
| #define R_INLINE inline
| #define SIZEOF_INT 4
| #define INT_32_BITS 1
| #define SIZEOF_LONG 8
| #define SIZEOF_LONG_LONG 8
| #define SIZEOF_DOUBLE 8
| #define SIZEOF_SIZE_T 8
| #define HAVE_LONG_DOUBLE 1
| #define SIZEOF_LONG_DOUBLE 16
| /* end confdefs.h. */
|
| #ifndef _OPENMP
| choke me
| #endif
| #include <omp.h>
| int main () { return omp_get_num_threads (); }
|
configure:22769: result: unsupported
configure:22800: checking how to get verbose linking output from /usr/local/bin/gfortran
configure:22810: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 conftest.f >&5
dyld: Library not loaded: @@HOMEBREW_PREFIX@@/lib/libisl.10.dylib
Referenced from: /usr/local/lib/libcloog-isl.4.dylib
Reason: image not found
gfortran: internal compiler error: Trace/BPT trap: 5 (program f951)
./configure: line 2171: 64514 Abort trap: 6 $F77 -c $FFLAGS conftest.$ac_ext 1>&5
configure:22810: $? = 134
configure: failed program was:
| program main
|
| end
configure:22905: WARNING: compilation failed
configure:22911: result:
configure:22913: checking for Fortran 77 libraries of /usr/local/bin/gfortran
configure:22936: /usr/local/bin/gfortran -o conftest -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.f
dyld: Library not loaded: @@HOMEBREW_PREFIX@@/lib/libisl.10.dylib
Referenced from: /usr/local/lib/libcloog-isl.4.dylib
Reason: image not found
gfortran: internal compiler error: Trace/BPT trap: 5 (program f951)
./configure: line 22941: 64529 Abort trap: 6 $F77 -o conftest$ac_exeext $FFLAGS $LDFLAGS conftest.$ac_ext $LIBS 1>&5
configure:23132: result:
configure:23150: checking how to get verbose linking output from /usr/bin/clang
configure:23166: /usr/bin/clang -c -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 conftest.c >&5
configure:23166: $? = 0
configure:23188: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -v -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.9.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -mrelocation-model pic -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu penryn -target-linker-version 224.1 -v -resource-dir /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0 -I /usr/local/opt/readline/include -F/usr/local/Frameworks -I /opt/X11/include -I /opt/X11/include/freetype2 -F/usr/local/Frameworks -I/usr/local/include -Os -w -fdebug-compilation-dir /private/tmp/r-R19N/R-3.0.2 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.9.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fencode-extended-block-signature -fdiagnostics-show-option -o /var/folders/zj/8mz83k950rsbqm7xl6qh2h5w0000gn/T/conftest-FzeqII.o -x c conftest.c
clang -cc1 version 5.0 based upon LLVM 3.3svn default target x86_64-apple-darwin13.0.0
ignoring duplicate directory "/usr/local/Frameworks"
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/Frameworks (framework directory)
/opt/X11/include
/opt/X11/include/freetype2
/usr/local/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.9.0 -w -o conftest -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -headerpad_max_install_names /var/folders/zj/8mz83k950rsbqm7xl6qh2h5w0000gn/T/conftest-FzeqII.o -lSystem /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/lib/darwin/libclang_rt.osx.a -F/usr/local/Frameworks -F/usr/local/Frameworks
configure:23234: result: -v
configure:23236: checking for C libraries of /usr/bin/clang
configure:23263: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -v -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c >&5
Apple LLVM version 5.0 (clang-500.2.79) (based on LLVM 3.3svn)
Target: x86_64-apple-darwin13.0.0
Thread model: posix
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/clang" -cc1 -triple x86_64-apple-macosx10.9.0 -emit-obj -disable-free -disable-llvm-verifier -main-file-name conftest.c -mrelocation-model pic -pic-level 2 -mdisable-fp-elim -masm-verbose -munwind-tables -target-cpu penryn -target-linker-version 224.1 -v -resource-dir /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0 -I /usr/local/opt/readline/include -F/usr/local/Frameworks -I /opt/X11/include -I /opt/X11/include/freetype2 -F/usr/local/Frameworks -I/usr/local/include -Os -w -fdebug-compilation-dir /private/tmp/r-R19N/R-3.0.2 -ferror-limit 19 -fmessage-length 0 -stack-protector 1 -mstackrealign -fblocks -fobjc-runtime=macosx-10.9.0 -fobjc-dispatch-method=mixed -fobjc-default-synthesize-properties -fencode-extended-block-signature -fdiagnostics-show-option -o /var/folders/zj/8mz83k950rsbqm7xl6qh2h5w0000gn/T/conftest-kqNyyQ.o -x c conftest.c
clang -cc1 version 5.0 based upon LLVM 3.3svn default target x86_64-apple-darwin13.0.0
ignoring duplicate directory "/usr/local/Frameworks"
ignoring duplicate directory "/usr/local/include"
as it is a non-system directory that duplicates a system directory
#include "..." search starts here:
#include <...> search starts here:
/usr/local/opt/readline/include
/usr/local/Frameworks (framework directory)
/opt/X11/include
/opt/X11/include/freetype2
/usr/local/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/include
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include
/usr/include
/System/Library/Frameworks (framework directory)
/Library/Frameworks (framework directory)
End of search list.
"/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld" -demangle -dynamic -arch x86_64 -macosx_version_min 10.9.0 -w -o conftest -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -headerpad_max_install_names /var/folders/zj/8mz83k950rsbqm7xl6qh2h5w0000gn/T/conftest-kqNyyQ.o -lSystem /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/lib/darwin/libclang_rt.osx.a -F/usr/local/Frameworks -F/usr/local/Frameworks
configure:23414: result: -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/lib/darwin/libclang_rt.osx.a
configure:23549: checking for dummy main to link with Fortran 77 libraries
configure:23583: /usr/bin/clang -o conftest -Os -w -pipe -march=native -mmacosx-version-min=10.9 -I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2 -L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib conftest.c -lm >&5
configure:23583: $? = 0
configure:23628: result: none
configure:23661: checking for Fortran 77 name-mangling scheme
configure:23674: /usr/local/bin/gfortran -c -Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1 conftest.f >&5
dyld: Library not loaded: @@HOMEBREW_PREFIX@@/lib/libisl.10.dylib
Referenced from: /usr/local/lib/libcloog-isl.4.dylib
Reason: image not found
gfortran: internal compiler error: Trace/BPT trap: 5 (program f951)
./configure: line 2171: 64616 Abort trap: 6 $F77 -c $FFLAGS conftest.$ac_ext 1>&5
configure:23674: $? = 134
configure: failed program was:
| subroutine foobar()
| return
| end
| subroutine foo_bar()
| return
| end
configure:23807: error: in `/private/tmp/r-R19N/R-3.0.2':
configure:23809: error: cannot compile a simple Fortran program
See `config.log' for more details
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-apple-darwin13.0.0
ac_cv_c_bigendian=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_uint64_t=yes
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_BLAS_LIBS_set=
ac_cv_env_BLAS_LIBS_value=
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=set
ac_cv_env_CC_value=/usr/bin/clang
ac_cv_env_CFLAGS_set=set
ac_cv_env_CFLAGS_value='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
ac_cv_env_CPICFLAGS_set=
ac_cv_env_CPICFLAGS_value=
ac_cv_env_CPPFLAGS_set=set
ac_cv_env_CPPFLAGS_value='-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2'
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=set
ac_cv_env_CXXFLAGS_value='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
ac_cv_env_CXXPICFLAGS_set=
ac_cv_env_CXXPICFLAGS_value=
ac_cv_env_CXX_set=set
ac_cv_env_CXX_value=/usr/bin/clang++
ac_cv_env_DEFS_set=
ac_cv_env_DEFS_value=
ac_cv_env_DYLIB_LDFLAGS_set=
ac_cv_env_DYLIB_LDFLAGS_value=
ac_cv_env_DYLIB_LD_set=
ac_cv_env_DYLIB_LD_value=
ac_cv_env_F77_set=set
ac_cv_env_F77_value=/usr/local/bin/gfortran
ac_cv_env_FCFLAGS_set=set
ac_cv_env_FCFLAGS_value='-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'
ac_cv_env_FCPICFLAGS_set=
ac_cv_env_FCPICFLAGS_value=
ac_cv_env_FC_set=set
ac_cv_env_FC_value=/usr/local/bin/gfortran
ac_cv_env_FFLAGS_set=set
ac_cv_env_FFLAGS_value='-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'
ac_cv_env_FPICFLAGS_set=
ac_cv_env_FPICFLAGS_value=
ac_cv_env_JAVA_HOME_set=set
ac_cv_env_JAVA_HOME_value=/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home
ac_cv_env_LAPACK_LIBS_set=
ac_cv_env_LAPACK_LIBS_value=
ac_cv_env_LDFLAGS_set=set
ac_cv_env_LDFLAGS_value='-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib'
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_LIBnn_set=
ac_cv_env_LIBnn_value=
ac_cv_env_MAIN_CFLAGS_set=
ac_cv_env_MAIN_CFLAGS_value=
ac_cv_env_MAIN_FFLAGS_set=
ac_cv_env_MAIN_FFLAGS_value=
ac_cv_env_MAIN_LDFLAGS_set=
ac_cv_env_MAIN_LDFLAGS_value=
ac_cv_env_MAIN_LD_set=
ac_cv_env_MAIN_LD_value=
ac_cv_env_MAKE_set=
ac_cv_env_MAKE_value=
ac_cv_env_OBJCFLAGS_set=set
ac_cv_env_OBJCFLAGS_value='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
ac_cv_env_OBJC_set=set
ac_cv_env_OBJC_value=/usr/bin/clang
ac_cv_env_R_BATCHSAVE_set=
ac_cv_env_R_BATCHSAVE_value=
ac_cv_env_R_BROWSER_set=
ac_cv_env_R_BROWSER_value=
ac_cv_env_R_PAPERSIZE_set=
ac_cv_env_R_PAPERSIZE_value=
ac_cv_env_R_PDFVIEWER_set=
ac_cv_env_R_PDFVIEWER_value=
ac_cv_env_R_PRINTCMD_set=
ac_cv_env_R_PRINTCMD_value=
ac_cv_env_R_SHELL_set=
ac_cv_env_R_SHELL_value=
ac_cv_env_SAFE_FFLAGS_set=
ac_cv_env_SAFE_FFLAGS_value=
ac_cv_env_SHLIB_CFLAGS_set=
ac_cv_env_SHLIB_CFLAGS_value=
ac_cv_env_SHLIB_CXXLDFLAGS_set=
ac_cv_env_SHLIB_CXXLDFLAGS_value=
ac_cv_env_SHLIB_CXXLD_set=
ac_cv_env_SHLIB_CXXLD_value=
ac_cv_env_SHLIB_FCLDFLAGS_set=
ac_cv_env_SHLIB_FCLDFLAGS_value=
ac_cv_env_SHLIB_FCLD_set=
ac_cv_env_SHLIB_FCLD_value=
ac_cv_env_SHLIB_FFLAGS_set=
ac_cv_env_SHLIB_FFLAGS_value=
ac_cv_env_SHLIB_LDFLAGS_set=
ac_cv_env_SHLIB_LDFLAGS_value=
ac_cv_env_SHLIB_LD_set=
ac_cv_env_SHLIB_LD_value=
ac_cv_env_TAR_set=
ac_cv_env_TAR_value=
ac_cv_env_TCLTK_CPPFLAGS_set=
ac_cv_env_TCLTK_CPPFLAGS_value=
ac_cv_env_TCLTK_LIBS_set=
ac_cv_env_TCLTK_LIBS_value=
ac_cv_env_XMKMF_set=
ac_cv_env_XMKMF_value=
ac_cv_env_YACC_set=
ac_cv_env_YACC_value=
ac_cv_env_YFLAGS_set=
ac_cv_env_YFLAGS_value=
ac_cv_env_build_alias_set=
ac_cv_env_build_alias_value=
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_r_arch_set=
ac_cv_env_r_arch_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_f77_compiler_gnu=yes
ac_cv_f77_dummy_main=none
ac_cv_f77_libs=
ac_cv_fortran_dummy_main=none
ac_cv_func_history_truncate_file=yes
ac_cv_have_decl_rl_completion_matches=yes
ac_cv_have_decl_siglongjmp=yes
ac_cv_have_decl_sigsetjmp=yes
ac_cv_header_arpa_inet_h=yes
ac_cv_header_dirent_dirent_h=yes
ac_cv_header_dl_h=no
ac_cv_header_dlfcn_h=yes
ac_cv_header_elf_h=no
ac_cv_header_errno_h=yes
ac_cv_header_fcntl_h=yes
ac_cv_header_floatingpoint_h=no
ac_cv_header_fpu_control_h=no
ac_cv_header_glob_h=yes
ac_cv_header_grp_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_limits_h=yes
ac_cv_header_locale_h=yes
ac_cv_header_memory_h=yes
ac_cv_header_minix_config_h=no
ac_cv_header_netdb_h=yes
ac_cv_header_netinet_in_h=yes
ac_cv_header_pwd_h=yes
ac_cv_header_readline_history_h=yes
ac_cv_header_readline_readline_h=yes
ac_cv_header_sched_h=yes
ac_cv_header_stdarg_h=yes
ac_cv_header_stdbool_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_param_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_select_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_times_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_sys_utsname_h=yes
ac_cv_header_sys_wait_h=yes
ac_cv_header_unistd_h=yes
ac_cv_header_utime_h=yes
ac_cv_host=x86_64-apple-darwin13.0.0
ac_cv_lib_m_sin=yes
ac_cv_lib_readline_rl_callback_read_char=yes
ac_cv_objc_compiler_gnu=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GETWD=/bin/pwd
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_INSTALL_INFO=/usr/bin/install-info
ac_cv_path_MAKEINFO=/usr/bin/makeinfo
ac_cv_path_NOTANGLE=false
ac_cv_path_PAGER=/usr/bin/less
ac_cv_path_PKGCONF=/usr/local/bin/pkg-config
ac_cv_path_REALPATH=false
ac_cv_path_R_BROWSER=/usr/bin/open
ac_cv_path_R_BZIPCMD=/usr/bin/bzip2
ac_cv_path_R_GZIPCMD=/usr/bin/gzip
ac_cv_path_R_PDFVIEWER=/usr/bin/open
ac_cv_path_R_UNZIPCMD=/usr/bin/unzip
ac_cv_path_R_ZIPCMD=/usr/bin/zip
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_TAR=/usr/bin/tar
ac_cv_path_TEXI2DVI=/usr/bin/texi2dvi
ac_cv_path_WHICH=/usr/bin/which
ac_cv_path_install='/usr/bin/install -c'
ac_cv_prog_AR=ar
ac_cv_prog_AWK=awk
ac_cv_prog_CPP='/usr/bin/clang -E'
ac_cv_prog_CXXCPP='/usr/bin/clang++ -E'
ac_cv_prog_YACC='bison -y'
ac_cv_prog_ac_ct_CC=/usr/bin/clang
ac_cv_prog_ac_ct_DSYMUTIL=dsymutil
ac_cv_prog_ac_ct_LIPO=lipo
ac_cv_prog_ac_ct_NMEDIT=nmedit
ac_cv_prog_ac_ct_OTOOL=otool
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_c_openmp=unsupported
ac_cv_prog_cc_c89=
ac_cv_prog_cc_c99=
ac_cv_prog_cc_g=yes
ac_cv_prog_cc_stdc=
ac_cv_prog_cxx_g=yes
ac_cv_prog_f77_g=yes
ac_cv_prog_gcc_traditional=no
ac_cv_prog_objc_g=yes
ac_cv_safe_to_define___extensions__=yes
ac_cv_search_dlopen='none required'
ac_cv_search_opendir='none required'
ac_cv_sizeof_double=8
ac_cv_sizeof_int=4
ac_cv_sizeof_long=8
ac_cv_sizeof_long_double=16
ac_cv_sizeof_long_long=8
ac_cv_sizeof_size_t=8
ac_cv_type_blkcnt_t=yes
ac_cv_type_int64_t=yes
ac_cv_type_int_fast64_t=yes
ac_cv_type_intptr_t=yes
ac_cv_type_pid_t=yes
ac_cv_type_signal=void
ac_cv_type_size_t=yes
ac_cv_type_stack_t=yes
ac_cv_type_uintptr_t=yes
lt_cv_apple_cc_single_mod=yes
lt_cv_deplibs_check_method=pass_all
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_exported_symbols_list=yes
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
lt_cv_path_LDCXX=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld
lt_cv_path_NM=/usr/bin/nm
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_CXX=yes
lt_cv_prog_compiler_c_o_F77=yes
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_CXX=yes
lt_cv_prog_compiler_pic_works_F77=yes
lt_cv_prog_compiler_rtti_exceptions=yes
lt_cv_prog_compiler_static_works=no
lt_cv_prog_compiler_static_works_CXX=no
lt_cv_prog_compiler_static_works_F77=no
lt_cv_prog_gnu_ld=no
lt_cv_prog_gnu_ldcxx=no
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([BCDEGRST][BCDEGRST]*\)[ ][ ]*_\([_A-Za-z][_A-Za-z0-9]*\)$/\1 _\2 \2/p'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\) $/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[BCDEGRST]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[BCDEGRST]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=196608
r_cv_OBJCXX=/usr/bin/clang++
r_cv_c_inline=inline
r_cv_c_libs=' -L/usr/local/opt/readline/lib -L/usr/local/lib -L/opt/X11/lib -lSystem /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/../lib/clang/5.0/lib/darwin/libclang_rt.osx.a'
r_cv_header_glibc2=no
r_cv_header_setjmp_posix=yes
r_cv_prog_c_v=-v
r_cv_prog_cc_c_o_lo=yes
r_cv_prog_cc_m='$(CC) -MM'
r_cv_prog_cc_vis=yes
r_cv_prog_f77_vis=yes
r_cv_prog_makeinfo_v4=yes
r_cv_size_max=yes
r_cv_type_socklen=socklen_t
r_cv_visibility_attribute=no
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='aclocal'
ALLOCA=''
AR='ar'
ARFLAGS='rc'
AUTOCONF='autoconf'
AUTOHEADER='autoheader'
AUTOMAKE='automake'
AWK='awk'
BITMAP_LIBS=''
BLAS_LIBS0=''
BLAS_LIBS=''
BLAS_SHLIB_FALSE=''
BLAS_SHLIB_TRUE=''
BUILDDIR_IS_SRCDIR='yes'
BUILD_AQUA_FALSE=''
BUILD_AQUA_TRUE=''
BUILD_BZLIB_FALSE=''
BUILD_BZLIB_TRUE=''
BUILD_CC=''
BUILD_CYGWIN_FALSE=''
BUILD_CYGWIN_TRUE=''
BUILD_DEVCAIRO_FALSE=''
BUILD_DEVCAIRO_TRUE=''
BUILD_HTML_FALSE=''
BUILD_HTML_TRUE='#'
BUILD_INCLUDED_LIBINTL=''
BUILD_LIBINTL_FALSE=''
BUILD_LIBINTL_TRUE=''
BUILD_LTO_FALSE=''
BUILD_LTO_TRUE='#'
BUILD_PCRE_FALSE=''
BUILD_PCRE_TRUE=''
BUILD_R=''
BUILD_X11_FALSE=''
BUILD_X11_TRUE=''
BUILD_XDR_FALSE=''
BUILD_XDR_TRUE=''
BUILD_XZ_FALSE=''
BUILD_XZ_TRUE=''
BUILD_ZLIB_FALSE=''
BUILD_ZLIB_TRUE=''
BYTE_COMPILE_PACKAGES_FALSE='#'
BYTE_COMPILE_PACKAGES_TRUE=''
CAIROX11_CPPFLAGS=''
CAIROX11_LIBS=''
CAIRO_CPPFLAGS=''
CAIRO_LIBS=''
CATOBJEXT=''
CC='/usr/bin/clang'
CFLAGS='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
CFLAG_VISIBILITY=''
COMPILE_FORTRAN_DOUBLE_COMPLEX_FALSE=''
COMPILE_FORTRAN_DOUBLE_COMPLEX_TRUE=''
CPICFLAGS=''
CPP='/usr/bin/clang -E'
CPPFLAGS='-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2'
CROSS_COMPILING_FALSE=''
CROSS_COMPILING_TRUE='#'
CXX='/usr/bin/clang++'
CXXCPP0='$(CXX) -E'
CXXCPP='/usr/bin/clang++ -E'
CXXFLAGS='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
CXXPICFLAGS=''
C_VISIBILITY=''
DATADIRNAME=''
DEFS=''
DSYMUTIL='dsymutil'
DUMPBIN=''
DYLIB_EXT=''
DYLIB_LD=''
DYLIB_LDFLAGS=''
DYLIB_UNDEFINED_ALLOWED_FALSE=''
DYLIB_UNDEFINED_ALLOWED_TRUE=''
ECHO_C='\c'
ECHO_N=''
ECHO_T=''
EGREP='/usr/bin/grep -E'
EXEEXT=''
F77='/usr/local/bin/gfortran'
F77_VISIBILITY=''
FC='/usr/local/bin/gfortran'
FCFLAGS='-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'
FCFLAGS_f90=''
FCFLAGS_f95=''
FCLIBS=''
FCPICFLAGS=''
FFLAGS='-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'
FGREP='/usr/bin/grep -F'
FLIBS=''
FLIBS_IN_SO=''
FOUNDATION_CPPFLAGS=''
FOUNDATION_LIBS=''
FPICFLAGS=''
FW_VERSION='3.0'
GENCAT=''
GETWD='/bin/pwd'
GLIBC21=''
GLIBC2=''
GREP='/usr/bin/grep'
HAVE_ASPRINTF=''
HAVE_FORTRAN_DOUBLE_COMPLEX=''
HAVE_POSIX_PRINTF=''
HAVE_SNPRINTF=''
HAVE_VISIBILITY=''
HAVE_WPRINTF=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_INFO='/usr/bin/install-info'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTOBJEXT=''
INTLBISON=''
INTLLIBS=''
INTLOBJS=''
INTL_LIBTOOL_SUFFIX_PREFIX=''
INTL_MACOSX_LIBS=''
JAR=''
JAVA=''
JAVAC=''
JAVAH=''
JAVA_CPPFLAGS0=''
JAVA_HOME='/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home'
JAVA_LD_LIBRARY_PATH=''
JAVA_LIBS0=''
KPSEWHICH=''
LAPACK_LDFLAGS=''
LAPACK_LIBS=''
LD='/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld'
LDFLAGS='-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib'
LIBICONV=''
LIBINTL=''
LIBM=''
LIBMULTITHREAD=''
LIBOBJS=''
LIBPTH=''
LIBR='-L$(R_HOME)/lib$(R_ARCH) -lR'
LIBR_LDFLAGS=''
LIBS='-lm '
LIBTHREAD=''
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIBTOOL_DEPS='tools/ltmain.sh'
LIBnn='lib'
LIPO='lipo'
LN_S='ln -s'
LTLIBICONV=''
LTLIBINTL=''
LTLIBMULTITHREAD=''
LTLIBOBJS=''
LTLIBPTH=''
LTLIBTHREAD=''
LTO=''
LTOALL=''
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAIN_CFLAGS=''
MAIN_FFLAGS=''
MAIN_LD=''
MAIN_LDFLAGS=''
MAJ_MIN_VERSION='3.0'
MAKE='make'
MAKEINDEX=''
MAKEINFO='/usr/bin/makeinfo'
MKDIR_P=''
NM='/usr/bin/nm'
NMEDIT='nmedit'
NOTANGLE='false'
OBJC='/usr/bin/clang'
OBJCFLAGS='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
OBJCXX='/usr/bin/clang++'
OBJCXXFLAGS='-Os -w -pipe -march=native -mmacosx-version-min=10.9'
OBJC_LIBS=''
OBJDUMP='false'
OBJEXT='o'
OPENMP_CFLAGS=''
OPENMP_CXXFLAGS=''
OPENMP_FCFLAGS=''
OPENMP_FFLAGS=''
OSF_SH_BUG=''
OTOOL64=':'
OTOOL='otool'
PACKAGE='R'
PACKAGE_BUGREPORT='http://bugs.r-project.org'
PACKAGE_NAME='R'
PACKAGE_STRING='R 3.0.2'
PACKAGE_TARNAME='R'
PACKAGE_URL='http://www.r-project.org'
PACKAGE_VERSION='3.0.2'
PAGER='/usr/bin/less'
PAPERCONF=''
PATH_SEPARATOR=':'
PDFLATEX=''
PDFTEX=''
PKGCONF='/usr/local/bin/pkg-config'
POSUB=''
PRI_MACROS_BROKEN=''
RANLIB='ranlib'
RBLAS_LDFLAGS=''
READLINE_LIBS='-lreadline '
REALPATH='false'
RLAPACK_LDFLAGS=''
RMATH_HAVE_EXPM1=''
RMATH_HAVE_HYPOT=''
RMATH_HAVE_LOG1P=''
RMATH_HAVE_WORKING_LOG1P=''
R_ARCH=''
R_BATCHSAVE=''
R_BROWSER='/usr/bin/open'
R_BZIPCMD='/usr/bin/bzip2'
R_CONFIG_ARGS=' '\''--prefix=/usr/local/Cellar/r/3.0.2'\'' '\''--with-aqua'\'' '\''--enable-R-framework'\'' '\''--with-lapack'\'' '\''JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home'\'' '\''CC=/usr/bin/clang'\'' '\''CFLAGS=-Os -w -pipe -march=native -mmacosx-version-min=10.9'\'' '\''LDFLAGS=-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib'\'' '\''CPPFLAGS=-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2'\'' '\''F77=/usr/local/bin/gfortran'\'' '\''FFLAGS=-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'\'' '\''CXX=/usr/bin/clang++'\'' '\''CXXFLAGS=-Os -w -pipe -march=native -mmacosx-version-min=10.9'\'' '\''OBJC=/usr/bin/clang'\'' '\''OBJCFLAGS=-Os -w -pipe -march=native -mmacosx-version-min=10.9'\'' '\''FC=/usr/local/bin/gfortran'\'' '\''FCFLAGS=-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'\'''
R_DEFS=''
R_GZIPCMD='/usr/bin/gzip'
R_JAVA_LD_LIBRARY_PATH=''
R_LD_LIBRARY_PATH=''
R_OPENMP_CFLAGS=''
R_OPENMP_FFLAGS=''
R_OS='darwin13.0.0'
R_OSTYPE='unix'
R_PAPERSIZE=''
R_PDFVIEWER='/usr/bin/open'
R_PLATFORM='x86_64-apple-darwin13.0.0'
R_PRINTCMD=''
R_PROFILING=''
R_RD4PDF='times,inconsolata,hyper'
R_SHELL=''
R_SYSTEM_ABI=''
R_UNZIPCMD='/usr/bin/unzip'
R_XTRA_CFLAGS=''
R_XTRA_CPPFLAGS2='-I$(R_INCLUDE_DIR)'
R_XTRA_CPPFLAGS=''
R_XTRA_CXXFLAGS=''
R_XTRA_FFLAGS=''
R_XTRA_LIBS=''
R_ZIPCMD='/usr/bin/zip'
Rshlibpath_var='DYLD_FALLBACK_LIBRARY_PATH'
SAFE_FFLAGS=''
SED='/usr/bin/sed'
SHELL='/bin/sh'
SHLIB_CFLAGS=''
SHLIB_CXXFLAGS=''
SHLIB_CXXLD=''
SHLIB_CXXLDFLAGS=''
SHLIB_EXT=''
SHLIB_FCLD=''
SHLIB_FCLDFLAGS=''
SHLIB_FFLAGS=''
SHLIB_LD=''
SHLIB_LDFLAGS=''
SHLIB_LIBADD=''
SHLIB_OPENMP_CFLAGS=''
SHLIB_OPENMP_CXXFLAGS=''
SHLIB_OPENMP_FCFLAGS=''
SHLIB_OPENMP_FFLAGS=''
STATICR1=''
STATICR2=''
STRIP='strip'
TAR='/usr/bin/tar'
TCLTK_CPPFLAGS=''
TCLTK_LIBS=''
TCL_CONFIG=''
TEX=''
TEXI2DVI='/usr/bin/texi2dvi'
TEXI2DVICMD='/usr/bin/texi2dvi'
TIRPC_CPPFLAGS=''
TK_CONFIG=''
USE_EXPORTFILES_FALSE=''
USE_EXPORTFILES_TRUE=''
USE_EXTERNAL_BLAS_FALSE=''
USE_EXTERNAL_BLAS_TRUE=''
USE_EXTERNAL_LAPACK_FALSE=''
USE_EXTERNAL_LAPACK_TRUE=''
USE_ICU=''
USE_ICU_APPLE=''
USE_INCLUDED_LIBINTL=''
USE_MMAP_ZLIB_FALSE=''
USE_MMAP_ZLIB_TRUE=''
USE_NLS=''
USE_NLS_FALSE=''
USE_NLS_TRUE=''
USE_RECOMMENDED_PACKAGES_FALSE=''
USE_RECOMMENDED_PACKAGES_TRUE=''
USE_VECLIB_G95FIX_FALSE=''
USE_VECLIB_G95FIX_TRUE=''
VERSION='3.0.2'
WANT_R_FRAMEWORK_FALSE='#'
WANT_R_FRAMEWORK_TRUE=''
WANT_R_SHLIB_FALSE='#'
WANT_R_SHLIB_TRUE=''
WANT_R_STATIC_FALSE=''
WANT_R_STATIC_TRUE='#'
WHICH='/usr/bin/which'
WOE32DLL=''
XMKMF=''
XTRA_INTL_CPPFLAGS=''
X_CFLAGS=''
X_EXTRA_LIBS=''
X_LIBS=''
X_PRE_LIBS=''
YACC='bison -y'
YFLAGS=''
ac_ct_CC='/usr/bin/clang'
ac_ct_CXX=''
ac_ct_DUMPBIN=''
ac_ct_F77=''
ac_ct_FC=''
ac_ct_OBJC=''
bindir='${exec_prefix}/bin'
build='x86_64-apple-darwin13.0.0'
build_alias=''
build_cpu='x86_64'
build_os='darwin13.0.0'
build_vendor='apple'
config_opts=' '\''--prefix=/usr/local/Cellar/r/3.0.2'\'' '\''--with-aqua'\'' '\''--enable-R-framework'\'' '\''--with-lapack'\'' '\''JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.7.0_40.jdk/Contents/Home'\'' '\''CC=/usr/bin/clang'\'' '\''CFLAGS=-Os -w -pipe -march=native -mmacosx-version-min=10.9'\'' '\''LDFLAGS=-L/usr/local/opt/readline/lib -L/usr/local/lib -F/usr/local/Frameworks -Wl,-headerpad_max_install_names -L/opt/X11/lib'\'' '\''CPPFLAGS=-I/usr/local/opt/readline/include -F/usr/local/Frameworks -I/opt/X11/include -I/opt/X11/include/freetype2'\'' '\''F77=/usr/local/bin/gfortran'\'' '\''FFLAGS=-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'\'' '\''CXX=/usr/bin/clang++'\'' '\''CXXFLAGS=-Os -w -pipe -march=native -mmacosx-version-min=10.9'\'' '\''OBJC=/usr/bin/clang'\'' '\''OBJCFLAGS=-Os -w -pipe -march=native -mmacosx-version-min=10.9'\'' '\''FC=/usr/local/bin/gfortran'\'' '\''FCFLAGS=-Os -w -pipe -mmacosx-version-min=10.9 -march=core2 -msse4.1'\'''
custom_JAVA_CPPFLAGS=''
custom_JAVA_HOME=''
custom_JAVA_LD_LIBRARY_PATH=''
custom_JAVA_LIBS=''
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
exec_prefix='NONE'
host='x86_64-apple-darwin13.0.0'
host_alias=''
host_cpu='x86_64'
host_os='darwin13.0.0'
host_vendor='apple'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
libdir='${exec_prefix}/${LIBnn}'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
lt_ECHO='/bin/echo'
mandir='${datarootdir}/man'
mkdir_p=''
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/usr/local/Cellar/r/3.0.2'
program_transform_name='s,x,x,'
psdir='${docdir}'
r_arch=''
rdocdir='${rhome}/doc'
rincludedir='${rhome}/include'
rsharedir='${rhome}/share'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
shlibpath_var='DYLD_LIBRARY_PATH'
striplib='strip -x'
stripstaticlib='strip -S'
sysconfdir='${prefix}/etc'
target_alias=''
use_tcltk=''
## ------------------- ##
## File substitutions. ##
## ------------------- ##
r_cc_lo_rules_frag='Makefrag.cc_lo'
r_cc_rules_frag='Makefrag.cc'
r_cxx_rules_frag=''
r_objc_rules_frag=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "R"
#define PACKAGE_TARNAME "R"
#define PACKAGE_VERSION "3.0.2"
#define PACKAGE_STRING "R 3.0.2"
#define PACKAGE_BUGREPORT "http://bugs.r-project.org"
#define PACKAGE_URL "http://www.r-project.org"
#define PACKAGE "R"
#define VERSION "3.0.2"
#define R_PLATFORM "x86_64-apple-darwin13.0.0"
#define R_CPU "x86_64"
#define R_VENDOR "apple"
#define R_OS "darwin13.0.0"
#define Unix 1
#define R_ARCH ""
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define __EXTENSIONS__ 1
#define _ALL_SOURCE 1
#define _GNU_SOURCE 1
#define _POSIX_PTHREAD_SEMANTICS 1
#define _TANDEM_SOURCE 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define HAVE_LIBM 1
#define HAVE_READLINE_HISTORY_H 1
#define HAVE_READLINE_READLINE_H 1
#define HAVE_LIBREADLINE 1
#define HAVE_HISTORY_TRUNCATE_FILE 1
#define HAVE_RL_COMPLETION_MATCHES 1
#define STDC_HEADERS 1
#define HAVE_DIRENT_H 1
#define HAVE_SYS_WAIT_H 1
#define HAVE_ARPA_INET_H 1
#define HAVE_DLFCN_H 1
#define HAVE_FCNTL_H 1
#define HAVE_GLOB_H 1
#define HAVE_GRP_H 1
#define HAVE_NETDB_H 1
#define HAVE_NETINET_IN_H 1
#define HAVE_PWD_H 1
#define HAVE_SCHED_H 1
#define HAVE_STRINGS_H 1
#define HAVE_SYS_PARAM_H 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_SELECT_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_SYS_TIMES_H 1
#define HAVE_SYS_UTSNAME_H 1
#define HAVE_UNISTD_H 1
#define HAVE_UTIME_H 1
#define HAVE_ERRNO_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_LIMITS_H 1
#define HAVE_LOCALE_H 1
#define HAVE_STDARG_H 1
#define HAVE_STDBOOL_H 1
#define HAVE_STDINT_H 1
#define HAVE_STRING_H 1
#define HAVE_DECL_SIGSETJMP 1
#define HAVE_DECL_SIGLONGJMP 1
#define HAVE_POSIX_SETJMP 1
#define RETSIGTYPE void
#define HAVE_INT64_T 1
#define HAVE_INT_FAST64_T 1
#define HAVE_DECL_SIZE_MAX 1
#define R_SOCKLEN_T socklen_t
#define HAVE_STACK_T 1
#define HAVE_INTPTR_T 1
#define HAVE_UINTPTR_T 1
#define R_INLINE inline
#define SIZEOF_INT 4
#define INT_32_BITS 1
#define SIZEOF_LONG 8
#define SIZEOF_LONG_LONG 8
#define SIZEOF_DOUBLE 8
#define SIZEOF_SIZE_T 8
#define HAVE_LONG_DOUBLE 1
#define SIZEOF_LONG_DOUBLE 16
configure: exit 1
HOMEBREW_VERSION: 0.9.5
ORIGIN: https://github.com/Homebrew/homebrew.git
HEAD: f741f6738dff7c8a3de1899919d22056da03a063
HOMEBREW_PREFIX: /usr/local
HOMEBREW_CELLAR: /usr/local/Cellar
CPU: dual-core 64-bit penryn
OS X: 10.9.1-x86_64
Xcode: 5.0.2
CLT: 5.0.1.0.1.1382131676
GCC-4.2: build 5666
Clang: 5.0 build 500
X11: 2.7.5 => /opt/X11
System Ruby: 1.8.7-358
Perl: /usr/bin/perl
Python: /usr/local/bin/python => /usr/local/Cellar/python/2.7.6/Frameworks/Python.framework/Versions/2.7/bin/python2.7
Ruby: /Users/bonkey/.rvm/rubies/ruby-2.0.0-p353/bin/ruby
Your system is ready to brew.
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