gistfile1.matlab

function varargout = prototypeVolView(varargin)
% PROTOTYPEVOLVIEW MATLAB code for prototypeVolView.fig
%      PROTOTYPEVOLVIEW, by itself, creates a new PROTOTYPEVOLVIEW or raises the existing
%      singleton*.
%
%      H = PROTOTYPEVOLVIEW returns the handle to a new PROTOTYPEVOLVIEW or the handle to
%      the existing singleton*.
%
%      PROTOTYPEVOLVIEW('CALLBACK',hObject,eventData,handles,...) calls the local
%      function named CALLBACK in PROTOTYPEVOLVIEW.M with the given input arguments.
%
%      PROTOTYPEVOLVIEW('Property','Value',...) creates a new PROTOTYPEVOLVIEW or raises the
%      existing singleton*.  Starting from the left, property value pairs are
%      applied to the GUI before prototypeVolView_OpeningFcn gets called.  An
%      unrecognized property name or invalid value makes property application
%      stop.  All inputs are passed to prototypeVolView_OpeningFcn via varargin.
%
%      *See GUI Options on GUIDE's Tools menu.  Choose "GUI allows only one
%      instance to run (singleton)".
%
% See also: GUIDE, GUIDATA, GUIHANDLES

% Edit the above text to modify the response to help prototypeVolView

% Last Modified by GUIDE v2.5 10-Dec-2014 15:02:17

% Begin initialization code - DO NOT EDIT
gui_Singleton = 1;
gui_State = struct('gui_Name',       mfilename, ...
                   'gui_Singleton',  gui_Singleton, ...
                   'gui_OpeningFcn', @prototypeVolView_OpeningFcn, ...
                   'gui_OutputFcn',  @prototypeVolView_OutputFcn, ...
                   'gui_LayoutFcn',  [] , ...
                   'gui_Callback',   []);
if nargin && ischar(varargin{1})
    gui_State.gui_Callback = str2func(varargin{1});
end

if nargout
    [varargout{1:nargout}] = gui_mainfcn(gui_State, varargin{:});
else
    gui_mainfcn(gui_State, varargin{:});
end
% End initialization code - DO NOT EDIT


% --- Executes just before prototypeVolView is made visible.
function prototypeVolView_OpeningFcn(hObject, eventdata, handles, varargin)
% This function has no output args, see OutputFcn.
% hObject    handle to figure
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)
% varargin   command line arguments to prototypeVolView (see VARARGIN)

% Choose default command line output for prototypeVolView
handles.output = hObject;

% set relevant image data to appdata
setappdata(0,   'mainfig',      gcf);

% Update handles structure
guidata(hObject, handles);

% UIWAIT makes prototypeVolView wait for user response (see UIRESUME)
% uiwait(handles.figure1);


% --- Outputs from this function are returned to the command line.
function varargout = prototypeVolView_OutputFcn(hObject, eventdata, handles) 
% varargout  cell array for returning output args (see VARARGOUT);
% hObject    handle to figure
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Get default command line output from handles structure
varargout{1} = handles.output;


% --- Executes on button press in maximizeButton.
function maximizeButton_Callback(hObject, eventdata, handles)
% hObject    handle to maximizeButton (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)


% --- Executes on button press in functionStartButton.
function functionStartButton_Callback(hObject, eventdata, handles)
% hObject    handle to functionStartButton (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% Get current appdata
mainfig = getappdata(0, 'mainfig');

% Data loaded, populate all three graphs
addpath([pwd '\Functions']);
addpath([pwd '\Data']);

%% All aforementioned code should be removed from maincode eventually
% Load preset data and visualize
command = sprintf('load(''%s'')', 'wiener2_outputted.mat');
v = evalin('base', command);
% Set default currentslice to midpoint of each axes
currentSlice = ceil(size(v.cq_wiener2)/2);

T = [1 0 0 0; ... 
    0 range(v.cq_wiener2(currentSlice(1),:,currentSlice(3)))/range(v.cq_wiener2(:,currentSlice(2), currentSlice(3))) 0 0; ...
    0 0 range(v.cq_wiener2(currentSlice(1),currentSlice(2),:))/range(v.cq_wiener2(:,currentSlice(2), currentSlice(3))) 0];

%Set current appdata
% v.cq_wiener2=flipdim(v.cq_wiener2,1);
% v.cq_wiener2=flipdim(v.cq_wiener2,3);
setappdata(mainfig, 'cq',           v.cq_wiener2)
setappdata(mainfig, 'currentSlice', currentSlice)
setappdata(mainfig, 'T',            T)

displayAll(handles)

% --- Executes on button press in zoomButton.
function zoomButton_Callback(hObject, eventdata, handles)
% hObject    handle to zoomButton (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)


% --- Executes on button press in measureButton.
function measureButton_Callback(hObject, eventdata, handles)
% hObject    handle to measureButton (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)


% --- Executes on scroll wheel click while the figure is in focus.
function figure1_WindowScrollWheelFcn(hObject, eventdata, handles)
% hObject    handle to figure1 (see GCBO)
% eventdata  structure with the following fields (see FIGURE)
%	VerticalScrollCount: signed integer indicating direction and number of clicks
%	VerticalScrollAmount: number of lines scrolled for each click
% handles    structure with handles and user data (see GUIDATA)

% Do in separate function
addpath([pwd '\Functions']);
sliceScrollFunction(handles, eventdata.VerticalScrollCount);

% --- Executes on mouse press over figure background, over a disabled or
% --- inactive control, or over an axes background.
function figure1_WindowButtonDownFcn(hObject, eventdata, handles)
% hObject    handle to figure1 (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

% SET CURRENTAXES TAG HERE!!!
current_gca = get(gca, 'Tag');

%% All aforementioned code should be removed from maincode eventually
% Set gca appdata
mainfig = getappdata(0, 'mainfig');
setappdata(mainfig, 'current_gca', current_gca);

% If mouseclick_type == alt, redraw
mouseclick_type = get(gcf, 'SelectionType');
if strcmp(mouseclick_type, 'alt')
    addpath([pwd '\Functions']);
    pt_coord = get(gca, 'CurrentPoint');
    redrawAllAxesonClick(handles, pt_coord(1,:))
end

% Debug Test
set(handles.debug_Axes_Text, 'String', current_gca);


% --- Executes on button press in inclCrosshairsChxbox.
function inclCrosshairsChxbox_Callback(hObject, eventdata, handles)
% hObject    handle to inclCrosshairsChxbox (see GCBO)
% eventdata  reserved - to be defined in a future version of MATLAB
% handles    structure with handles and user data (see GUIDATA)

if get(hObject, 'Value') == 1
    % Don't redraw, but instead add crosshairs to current gca's
    drawCrosshairs(handles);
else
    % Delete crosshairs
    displayAll(handles)
end