aviks/packagelist.markdown

## packagelist.markdown

      
    Raw
  

              packagelist.markdown
            
          
    ##ArgParse
Current Version: 0.0.0
 Carlo Baldassi
Package for parsing command-line arguments to Julia programs.
Source: https://github.com/carlobaldassi/ArgParse.jl
Dependencies:

Options Any Version 
TextWrap Any Version 

##Cairo
Current Version: 0.0.0
 The Julia Language
Bindings to the Cairo graphics library.
Source: https://github.com/JuliaLang/Cairo.jl
Dependencies:

Color Any Version 

##Calculus
Current Version: 0.0.0
 John Myles White
Calculus functions in Julia
Source: https://github.com/johnmyleswhite/Calculus.jl
Dependencies:
##Calendar
Current Version: 0.0.0
 Mike Nolta
Calendar time package for Julia
Source: https://github.com/nolta/Calendar.jl
More Info:
Dependencies:

ICU Any Version 

##Clustering
Current Version: 0.0.0
 John Myles White
Basic functions for clustering data: k-means, dp-means, etc.
Source: https://github.com/johnmyleswhite/Clustering.jl
Dependencies:

DataFrames Any Version 

##Color
Current Version: 0.0.0
 The Julia Language
Basic color manipulation utilities.
Source: https://github.com/JuliaLang/Color.jl
Dependencies:
##Compose
Current Version: 0.0.0
 Daniel Jones
Declarative vector graphics
Source: https://github.com/dcjones/Compose.jl
More Info:
Dependencies:
##DataFrames
Current Version: 0.0.0
 Harlan Harris
library for working with tabular data in Julia
Source: https://github.com/HarlanH/DataFrames.jl
Dependencies:

Options Any Version 

##Debug
Current Version: 0.0.0
 toivoh
Prototype interactive debugger for Julia
Source: https://github.com/toivoh/Debug.jl
Dependencies:
##Distributions
Current Version: 0.0.0
 JuliaStats
A Julia package for probability distributions and associated funtions.
Source: https://github.com/JuliaStats/Distributions.jl
Dependencies:
##Example
Current Version: 0.0.0
 The Julia Language
Example Julia package repo.
Source: https://github.com/JuliaLang/Example.jl
Dependencies:
##FITSIO
Current Version: 0.0.0
 Mike Nolta
FITS file package for Julia
Source: https://github.com/nolta/FITSIO.jl
Dependencies:
##FileFind
Current Version: 0.0.0
 John Myles White
File::Find implementation in Julia
Source: https://github.com/johnmyleswhite/FileFind.jl
Dependencies:
##GLU
Current Version: 0.0.0
 Robert Ennis
Julia interface to GLU
Source: https://github.com/rennis250/GLU.jl
Dependencies:

GetC Any Version 

##GLUT
Current Version: 0.0.0
 Robert Ennis
Julia interface to GLUT
Source: https://github.com/rennis250/GLUT.jl
Dependencies:

GLU Any Version 
GetC Any Version 
OpenGL Any Version 

##Gadfly
Current Version: 0.0.0
 Daniel Jones
Crafty statistical graphics for Julia.
Source: https://github.com/dcjones/Gadfly.jl
More Info:
Dependencies:

Compose Any Version 
DataFrames Any Version 
Distributions Any Version 
Iterators Any Version 

##GetC
Current Version: 0.0.0
 Robert Ennis
Minimal implementation of Jasper's Julia FFI
Source: https://github.com/rennis250/GetC.jl
Dependencies:
##Graphs
Current Version: 0.0.0
 John Myles White
Working with graphs in Julia
Source: https://github.com/johnmyleswhite/Graphs.jl
Dependencies:

DataFrames Any Version 

##Grid
Current Version: 0.0.0
 Tim Holy
Grid operations for the Julia language
Source: https://github.com/timholy/Grid.jl
Dependencies:
##HDF5
Current Version: 0.0.0
 Tim Holy
HDF5 interface for the Julia language
Source: https://github.com/timholy/HDF5.jl
More Info:
Dependencies:
##HTTP
Current Version: 0.0.0
 Dirk Gadsden
HTTP library (server, client, parser) for the Julia language
Source: https://github.com/dirk/HTTP.jl
Dependencies:
##HypothesisTests
Current Version: 0.0.0
 Simon Kornblith
T-tests, Wilcoxon rank sum (Mann-Whitney U), signed rank, and circular statistics in Julia
Source: https://github.com/simonster/HypothesisTests.jl
More Info:
Dependencies:
##ICU
Current Version: 0.0.0
 Mike Nolta
Julia wrapper for the International Components for Unicode (ICU) library
Source: https://github.com/nolta/ICU.jl
Dependencies:

UTF16 Any Version 

##IniFile
Current Version: 0.0.0
 The Julia Language
Reading and writing Windows-style INI files (writing not yet implemented).
Source: https://github.com/JuliaLang/IniFile.jl
Dependencies:
##Iterators
Current Version: 0.0.0
 The Julia Language
Common functional iterator patterns.
Source: https://github.com/JuliaLang/Iterators.jl
Dependencies:
##Ito
Current Version: 0.0.0
 Avik Sengupta
A Julia package for quantitative finance
Source: https://github.com/aviks/Ito.jl
More Info: http://aviks.github.com/Ito.jl/
Dependencies:

Calendar Any Version 
Distributions Any Version 

##JSON
Current Version: 0.0.0
 Avik Sengupta
JSON parsing and printing
Source: https://github.com/aviks/JSON.jl
More Info:
Dependencies:
##Languages
Current Version: 0.0.0
 John Myles White
A package for working with human languages
Source: https://github.com/johnmyleswhite/Languages.jl
Dependencies:
##Loss
Current Version: 0.0.0
 John Myles White
Loss functions
Source: https://github.com/johnmyleswhite/Loss.jl
Dependencies:
##MAT
Current Version: 0.0.0
 Simon Kornblith
Julia module for reading MATLAB files
Source: https://github.com/simonster/MAT.jl
More Info:
Dependencies:

HDF5 Any Version 

##MCMC
Current Version: 0.0.0
 Chris DuBois
MCMC tools for Julia
Source: https://github.com/doobwa/MCMC.jl
More Info:
Dependencies:

Options Any Version 

##Mongrel2
Current Version: 0.0.0
 Avik Sengupta
Mongrel2 handlers in Julia
Source: https://github.com/aviks/Mongrel2.jl
Dependencies:

JSON Any Version 
ZMQ Any Version 

##NHST
Current Version: 0.0.0
 John Myles White
Null hypothesis significance tests
Source: https://github.com/johnmyleswhite/NHST.jl
Dependencies:
##Named
Current Version: 0.0.0
 Harlan Harris
Julia named index and named vector types
Source: https://github.com/HarlanH/Named.jl
Dependencies:
##OpenGL
Current Version: 0.0.0
 Robert Ennis
Julia interface to OpenGL
Source: https://github.com/rennis250/OpenGL.jl
Dependencies:

GetC Any Version 

##Optim
Current Version: 0.0.0
 John Myles White
Optimization functions for Julia
Source: https://github.com/johnmyleswhite/Optim.jl
More Info: http://johnmyleswhite.com
Dependencies:

Calculus Any Version 
Distributions Any Version 
Options Any Version 

##Options
Current Version: 0.0.0
 The Julia Language
A framework for providing optional arguments to functions.
Source: https://github.com/JuliaLang/Options.jl
Dependencies:
##PLX
Current Version: 0.0.0
 Simon Kornblith
Julia module for reading Plexon PLX files
Source: https://github.com/simonster/PLX.jl
Dependencies:
##PatternDispatch
Current Version: 0.0.0
 toivoh
Method dispatch based on pattern matching for Julia
Source: https://github.com/toivoh/PatternDispatch.jl
Dependencies:
##ProjectTemplate
Current Version: 0.0.0
 John Myles White
ProjectTemplate for Julia
Source: https://github.com/johnmyleswhite/ProjectTemplate.jl
Dependencies:

DataFrames Any Version 
JSON Any Version 

##RDatasets
Current Version: 0.0.0
 John Myles White
Julia package for loading many of the data sets available in R
Source: https://github.com/johnmyleswhite/RDatasets.jl
Dependencies:

DataFrames Any Version 

##Rif
Current Version: 0.0.0
 Laurent Gautier
Julia-to-R interface
Source: https://github.com/lgautier/Rif.jl
Dependencies:
##SDL
Current Version: 0.0.0
 Robert Ennis
Julia interface to SDL
Source: https://github.com/rennis250/SDL.jl
Dependencies:

GLU Any Version 
GetC Any Version 
OpenGL Any Version 

##Sims
Current Version: 0.0.0
 Tom Short
Experiments with non-causal, equation-based modeling in Julia
Source: https://github.com/tshort/Sims.jl
Dependencies:
##Sound
Current Version: 0.0.0
 The Julia Language
Reading and writing from WAV files (should probably be named WAV).
Source: https://github.com/JuliaLang/Sound.jl
Dependencies:

Options Any Version 

##TextAnalysis
Current Version: 0.0.0
 John Myles White
Julia package for text analysis
Source: https://github.com/johnmyleswhite/TextAnalysis.jl
Dependencies:

DataFrames Any Version 
FileFind Any Version 
Languages Any Version 

##TextWrap
Current Version: 0.0.0
 Carlo Baldassi
Package for wrapping text into paragraphs.
Source: https://github.com/carlobaldassi/TextWrap.jl
Dependencies:

Options Any Version 

##Tk
Current Version: 0.0.0
 The Julia Language
Julia interface to Tk windowing toolkit.
Source: https://github.com/JuliaLang/Tk.jl
Dependencies:

Cairo Any Version 

##Trie
Current Version: 0.0.0
 The Julia Language
Implementation of the trie data structure.
Source: https://github.com/JuliaLang/Trie.jl
Dependencies:
##UTF16
Current Version: 0.0.0
 Mike Nolta
UTF16 string type for Julia
Source: https://github.com/nolta/UTF16.jl
Dependencies:
##Winston
Current Version: 0.0.0
 Mike Nolta
2D plotting for Julia
Source: https://github.com/nolta/Winston.jl
More Info:
Dependencies:

Cairo Any Version 
Color Any Version 
IniFile Any Version 
Tk Any Version 

##ZMQ
Current Version: 0.0.0
 Avik Sengupta
Julia interface to ZMQ
Source: https://github.com/aviks/ZMQ.jl
Dependencies:

  
## pkglist.jl
load("pkg")
load("JSON")
Pkg.update()
io=open("packagelist.md","w+");
for pkg in Metadata.each_package()
        print(" Processing $(pkg)\n")
          url = (Metadata.pkg_url(pkg))
          maxv = Metadata.versions([pkg])[end]
          url_reg = r"^(([^:/?#]+):)?(//([^/?#]*))?([^?#]*)(\?([^#]*))?(#(.*))?"
          gh_path_reg_git=r"^/(.*)?/(.*)?.git$"
          gh_path_reg_http=r"^/(.*)?/(.*)?$"
          m=match(url_reg, url)
          host=m.captures[4]
          path=m.captures[5]
          scheme=m.captures[2]
          fullname = "Not on Github"
          avatar = "Not on Github"
          desc = "Not on Github"
          homepage = nothing
          html_url = url
          user_url = url
          if ismatch(r"github\.com", host)
             if ismatch(r"git", scheme)
                m2 = match(gh_path_reg_git, path)
             else
                m2 = match(gh_path_reg_http, path)
             end
             user=m2.captures[1]
             repo=m2.captures[2]
             gh_repo=JSON.parse(readall(download_file("https://api.github.com/repos/$(user)/$(repo)?access_token=xxxxxxxxxxx")))
             gh_user=JSON.parse(readall(download_file("https://api.github.com/users/$(user)?access_token=xxxxxxxxxxxxxx")))
             fullname = get(gh_user, "name", user)
             avatar = gh_user["avatar_url"]
             user_url = gh_user["html_url"]
             desc = get(gh_repo, "description", "No description provided")
             homepage = get(gh_repo, "homepage", nothing)
             html_url = gh_repo["html_url"]
      	  end
         print(io, "\n##$(pkg)\n\n"); print(io, "Current Version: `$(maxv.version)`\n\n");
         print(io, "![user]($(avatar)) "); print(io, "*$(fullname)*\n\n")
         print(io, "$(desc) \n\n")
         print(io, "Source: $(html_url) \n\n")
         if homepage != nothing
         	print(io, "More Info: $(homepage) \n\n")
         end
         print(io, "_Dependencies:_\n\n" )
         ver_dir = "METADATA/$pkg/versions/$(maxv.version)/requires"
         any_ver = "Any Version"
         if isfile(ver_dir)
           vset = Metadata.parse_requires(ver_dir)
           for deps in vset
             print(io, "* `$(deps.package)` `$(length(deps.versions)>0 ? deps.versions : any_ver) ` \n")
           end
         end
end
close(io)
	load("pkg")
	load("JSON")
	Pkg.update()
	io=open("packagelist.md","w+");
	for pkg in Metadata.each_package()
	print(" Processing $(pkg)\n")
	url = (Metadata.pkg_url(pkg))
	maxv = Metadata.versions([pkg])[end]
	url_reg = r"^(([^:/?#]+):)?(//([^/?#]))?([^?#])(\?([^#]))?(#(.))?"
	gh_path_reg_git=r"^/(.)?/(.)?.git$"
	gh_path_reg_http=r"^/(.)?/(.)?$"
	m=match(url_reg, url)
	host=m.captures[4]
	path=m.captures[5]
	scheme=m.captures[2]
	fullname = "Not on Github"
	avatar = "Not on Github"
	desc = "Not on Github"
	homepage = nothing
	html_url = url
	user_url = url
	if ismatch(r"github\.com", host)
	if ismatch(r"git", scheme)
	m2 = match(gh_path_reg_git, path)
	else
	m2 = match(gh_path_reg_http, path)
	end
	user=m2.captures[1]
	repo=m2.captures[2]
	gh_repo=JSON.parse(readall(download_file("https://api.github.com/repos/$(user)/$(repo)?access_token=xxxxxxxxxxx")))
	gh_user=JSON.parse(readall(download_file("https://api.github.com/users/$(user)?access_token=xxxxxxxxxxxxxx")))
	fullname = get(gh_user, "name", user)
	avatar = gh_user["avatar_url"]
	user_url = gh_user["html_url"]
	desc = get(gh_repo, "description", "No description provided")
	homepage = get(gh_repo, "homepage", nothing)
	html_url = gh_repo["html_url"]
	end
	print(io, "\n##$(pkg)\n\n"); print(io, "Current Version: `$(maxv.version)`\n\n");
	print(io, "![user]($(avatar)) "); print(io, "$(fullname)\n\n")
	print(io, "$(desc) \n\n")
	print(io, "Source: $(html_url) \n\n")
	if homepage != nothing
	print(io, "More Info: $(homepage) \n\n")
	end
	print(io, "_Dependencies:_\n\n" )
	ver_dir = "METADATA/$pkg/versions/$(maxv.version)/requires"
	any_ver = "Any Version"
	if isfile(ver_dir)
	vset = Metadata.parse_requires(ver_dir)
	for deps in vset
	print(io, "* `$(deps.package)` `$(length(deps.versions)>0 ? deps.versions : any_ver) ` \n")
	end
	end
	end
	close(io)