Logfiles for GitLab pipeline https://bbpgitlab.epfl.ch/hpc/cellular/nrn/-/pipelines/163887 (:no_entry:) running on GitHub PR neuronsimulator/nrn#2468.

build-neuron-nmodl-intel-legacy.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838334:resolve_secrets
Resolving secrets
section_end:1697838334:resolve_secrets
section_start:1697838334:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor2568414236, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980024
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980024_PROD_P2160_CP2_C1
Job parameters: memory=76G, cpus_per_task=8, duration=2:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854017
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980024_PROD_P2160_CP2_C1 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=2:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854017 --cpus-per-task=8 --mem=76G     
section_end:1697838336:prepare_executor
section_start:1697838336:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n22 via bbpv1.epfl.ch...
section_end:1697838339:prepare_script
section_start:1697838339:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838340:get_sources
section_start:1697838340:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:neuron:nmodl:intel:legacy-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=220837 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838346:restore_cache
section_start:1697838346:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for build:nmodl (980023)...
Runtime platform                                    arch=amd64 os=linux pid=221426 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980023 responseStatus=200 OK token=64_7ZhFj
section_end:1697838347:download_artifacts
section_start:1697838347:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980024/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980024/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980024/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980024/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980024/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980024/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980024_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install neuron%oneapi ~rx3d~caliper~gpu+coreneuron~legacy-unit~openmp~shared~sympy+tests build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy  ^/zeh2ipk4tt36kewayr3sixulngvqmrxw
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854017/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854017/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:45:51 2023
  Hits:                 0 /    0
    Direct:             0 /    0
    Preprocessed:       0 /    0
  Misses:               0
    Direct:             0
    Preprocessed:       0
Primary storage:
  Hits:                 0 /    0
  Misses:               0
  Cache size (GB):   0.46 / 0.51 (89.54 %)
  Files:            13131
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   neuron%oneapi~caliper+coreneuron~gpu~legacy-unit~openmp~rx3d~shared~sympy+tests build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy
[+]      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]                  ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]              ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]          ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

Concretized
--------------------------------
 -   e6nj2bg  neuron@develop%oneapi@2022.2.1~caliper~codegenopt+coreneuron~gpu~interviews~ipo~knl+legacy-fr~legacy-unit+memacs+mod-compatibility+mpi~openmp~prcellstate+python+report~rx3d~shared~sympy~sympyopt+tests build_system=cmake build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy sanitizers=None arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3gsnkau      ^boost@1.80.0%gcc@12.2.0~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug~exception~fiber+filesystem~graph~graph_parallel~icu~iostreams~json~locale~log~math~mpi+multithreaded~nowide~numpy+pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded~stacktrace~system~taggedlayout+test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  xztjuru      ^gettext@0.21.1%gcc@12.2.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-rhel7-skylake
[^]  ms32l57          ^bzip2@1.0.8%gcc@12.2.0~debug~pic+shared build_system=generic arch=linux-rhel7-skylake
[^]  455jiaa          ^libiconv@1.16%gcc@12.2.0 build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  sktzpiy          ^libxml2@2.10.1%gcc@12.2.0~python build_system=autotools arch=linux-rhel7-skylake
[^]  q4mt2xu              ^pkgconf@1.8.0%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  ogdpwov              ^zlib@1.2.13%gcc@12.2.0+optimize+pic+shared build_system=makefile arch=linux-rhel7-skylake
[^]  3mknztm          ^tar@1.28%gcc@12.2.0 build_system=autotools patches=08921fc,125cd61,5c314db,d428578 zip=pigz arch=linux-rhel7-skylake
[^]  qy7gxuh          ^xz@5.2.7%gcc@12.2.0~pic build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  qk754fs      ^hpe-mpi@2.25.hmpt%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
 -   nzx2keq      ^libsonata-report@develop%gcc@12.2.0~ipo+mpi build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  h22zdqe          ^hdf5@1.14.0%gcc@12.2.0+cxx~fortran+hl~ipo~java~map+mpi~page_buffer_patch+shared~szip~threadsafe+tools api=default build_system=cmake build_type=RelWithDebInfo patches=0b5dd6f arch=linux-rhel7-skylake
[^]  xfi3vdr          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  kjtivgw      ^ncurses@6.3%gcc@12.2.0~symlinks+termlib abi=none build_system=autotools arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[+]  zeh2ipk      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7v6k26x          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  t7yyhxk          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  ee7ugzv          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  pi3gdaj          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  d4xzk5t          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  glx4cfn      ^py-mpi4py@3.1.4%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ly6cmfc      ^py-numpy@1.22.4%gcc@12.2.0+blas+lapack build_system=python_pip patches=873745d arch=linux-rhel7-skylake
[^]  fnkrysr          ^intel-oneapi-mkl@2021.4.0%gcc@12.2.0~cluster~ilp64+shared build_system=generic arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h      ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki          ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb      ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ua7apk4      ^py-pytest-cov@3.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6pjz7mt          ^py-coverage@6.4.4%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  ht7d3fj      ^readline@8.1.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/boost-1.80.0-3bzblf (external boost-1.80.0-3gsnkau2ceycwyu2nn7tdokqdxy6c3gx)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bzip2-1.0.8-e7n5ge (external bzip2-1.0.8-ms32l57ytvbcsrj3zhe3hban73lgynpm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libiconv-1.16-455jia
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/pkgconf-1.8.0-q4mt2x
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/xz-5.2.7-qy7gxu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/zlib-1.2.13-7d6hpk (external zlib-1.2.13-ogdpwovxjavmphqzlyrjfggoexpa4di2)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ncurses-6.3-mslafi (external ncurses-6.3-kjtivgwlm2tlta25c64eo7gxvxlxj7td)
[+] /usr (external tar-1.28-3mknztmfmrpum3mzcmd2rk7vvf76cskj)
==> hpe-mpi@2.25.hmpt : has external module in ['hpe-mpi/2.25.hmpt']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/hpe-mpi-2.25.hmpt-bvghnw (external hpe-mpi-2.25.hmpt-qk754fsip5huicz34oar3tlywrt5q2hf)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
==> intel-oneapi-mkl@2021.4.0 : has external module in ['intel-oneapi-mkl/2021.4.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/intel-oneapi-mkl-2021.4.0-q7vl7m (external intel-oneapi-mkl-2021.4.0-fnkrysrw7agok7ie2ffw2psaxrrcygjm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/readline-8.1.2-kapavr (external readline-8.1.2-ht7d3fjkgkkonyn5cozpooil4pjqhu5n)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libxml2-2.10.1-sktzpi
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/hdf5-1.14.0-h22zdq
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/gettext-0.21.1-xztjur
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpi4py-3.1.4-glx4cf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-coverage-6.4.4-6pjz7m
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-numpy-1.22.4-ly6cmf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-cov-3.0.0-ua7apk
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/libsonata-report-develop-nzx2ke
==> Installing neuron-develop-e6nj2bgfl5z2xzic3jwgugjdumufsef3
==> No binary for neuron-develop-e6nj2bgfl5z2xzic3jwgugjdumufsef3 found: installing from source
==> No patches needed for neuron
==> neuron: Executing phase: 'cmake'
==> neuron: Executing phase: 'build'
==> neuron: Executing phase: 'install'
==> neuron: Successfully installed neuron-develop-e6nj2bgfl5z2xzic3jwgugjdumufsef3
  Fetch: 29.95s.  Build: 29m 56.47s.  Total: 30m 26.42s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_oneapi-2022.2.1-skylake/neuron-develop-e6nj2b
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be e6nj2bgfl5z2xzic3jwgugjdumufsef3
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:          /nvme/bbpcihpcproj12/1854017/ccache
  Primary config:           /nvme/bbpcihpcproj12/1854017/ccache/ccache.conf
  Secondary config:         /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:            Sat Oct 21 00:19:04 2023
  Hits:                       794 /  862 (92.11 %)
    Direct:                   357 /  866 (41.22 %)
    Preprocessed:             437 /  508 (86.02 %)
  Misses:                      68
    Direct:                   509
    Preprocessed:              71
  Uncacheable:                804
Primary storage:
  Hits:                      1406 / 1731 (81.22 %)
  Misses:                     325
  Cache size (GB):           0.47 / 0.51 (90.84 %)
  Files:                    13449
Uncacheable:
  Autoconf compile/link:        5
  Called for linking:         786
  Called for preprocessing:     1
  Compilation failed:           3
  No input file:                8
  Preprocessing failed:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697840348:step_script
section_start:1697840348:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:neuron:nmodl:intel:legacy-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=263486 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Aneuron%3Anmodl%3Aintel%3Alegacy-1-non_protected 
Created cache
section_end:1697840368:archive_cache
section_start:1697840368:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=263828 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980024 responseStatus=201 Created token=64_7ZhFj
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=263871 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980024 responseStatus=201 Created token=64_7ZhFj
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=263910 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980024 responseStatus=201 Created token=64_7ZhFj
section_end:1697840370:upload_artifacts_on_success
section_start:1697840370:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697840371:cleanup_file_variables
Job succeeded

build-neuron-nmodl-intel-shared.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838335:resolve_secrets
Resolving secrets
section_end:1697838335:resolve_secrets
section_start:1697838335:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor734240550, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980025
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980025_PROD_P2160_CP3_C2
Job parameters: memory=76G, cpus_per_task=8, duration=2:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854018
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980025_PROD_P2160_CP3_C2 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=2:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854018 --cpus-per-task=8 --mem=76G     
section_end:1697838336:prepare_executor
section_start:1697838336:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n22 via bbpv1.epfl.ch...
section_end:1697838339:prepare_script
section_start:1697838339:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838340:get_sources
section_start:1697838340:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:neuron:nmodl:intel:shared-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=220758 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838346:restore_cache
section_start:1697838346:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for build:nmodl (980023)...
Runtime platform                                    arch=amd64 os=linux pid=221346 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980023 responseStatus=200 OK token=64_x1Dam
section_end:1697838347:download_artifacts
section_start:1697838347:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980025/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980025/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980025/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980025/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980025/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980025/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980025_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install neuron%oneapi ~rx3d~caliper~gpu+coreneuron~legacy-unit~openmp+shared+sympy+tests build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy  ^/zeh2ipk4tt36kewayr3sixulngvqmrxw
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854018/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854018/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:45:51 2023
  Hits:                 0 /    0
    Direct:             0 /    0
    Preprocessed:       0 /    0
  Misses:               0
    Direct:             0
    Preprocessed:       0
Primary storage:
  Hits:                 0 /    0
  Misses:               0
  Cache size (GB):   0.46 / 0.51 (90.65 %)
  Files:            12843
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   neuron%oneapi~caliper+coreneuron~gpu~legacy-unit~openmp~rx3d+shared+sympy+tests build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy
[+]      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]                  ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]              ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]          ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

Concretized
--------------------------------
 -   nnpvp4l  neuron@develop%oneapi@2022.2.1~caliper~codegenopt+coreneuron~gpu~interviews~ipo~knl+legacy-fr~legacy-unit+memacs+mod-compatibility+mpi~openmp~prcellstate+python+report~rx3d+shared+sympy~sympyopt+tests build_system=cmake build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy sanitizers=None arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3gsnkau      ^boost@1.80.0%gcc@12.2.0~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug~exception~fiber+filesystem~graph~graph_parallel~icu~iostreams~json~locale~log~math~mpi+multithreaded~nowide~numpy+pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded~stacktrace~system~taggedlayout+test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  xztjuru      ^gettext@0.21.1%gcc@12.2.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-rhel7-skylake
[^]  ms32l57          ^bzip2@1.0.8%gcc@12.2.0~debug~pic+shared build_system=generic arch=linux-rhel7-skylake
[^]  455jiaa          ^libiconv@1.16%gcc@12.2.0 build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  sktzpiy          ^libxml2@2.10.1%gcc@12.2.0~python build_system=autotools arch=linux-rhel7-skylake
[^]  q4mt2xu              ^pkgconf@1.8.0%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  ogdpwov              ^zlib@1.2.13%gcc@12.2.0+optimize+pic+shared build_system=makefile arch=linux-rhel7-skylake
[^]  3mknztm          ^tar@1.28%gcc@12.2.0 build_system=autotools patches=08921fc,125cd61,5c314db,d428578 zip=pigz arch=linux-rhel7-skylake
[^]  qy7gxuh          ^xz@5.2.7%gcc@12.2.0~pic build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  qk754fs      ^hpe-mpi@2.25.hmpt%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
 -   nzx2keq      ^libsonata-report@develop%gcc@12.2.0~ipo+mpi build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  h22zdqe          ^hdf5@1.14.0%gcc@12.2.0+cxx~fortran+hl~ipo~java~map+mpi~page_buffer_patch+shared~szip~threadsafe+tools api=default build_system=cmake build_type=RelWithDebInfo patches=0b5dd6f arch=linux-rhel7-skylake
[^]  xfi3vdr          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  kjtivgw      ^ncurses@6.3%gcc@12.2.0~symlinks+termlib abi=none build_system=autotools arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[+]  zeh2ipk      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7v6k26x          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  t7yyhxk          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  ee7ugzv          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  pi3gdaj          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  d4xzk5t          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  glx4cfn      ^py-mpi4py@3.1.4%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ly6cmfc      ^py-numpy@1.22.4%gcc@12.2.0+blas+lapack build_system=python_pip patches=873745d arch=linux-rhel7-skylake
[^]  fnkrysr          ^intel-oneapi-mkl@2021.4.0%gcc@12.2.0~cluster~ilp64+shared build_system=generic arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h      ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki          ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb      ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ua7apk4      ^py-pytest-cov@3.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6pjz7mt          ^py-coverage@6.4.4%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  ht7d3fj      ^readline@8.1.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/boost-1.80.0-3bzblf (external boost-1.80.0-3gsnkau2ceycwyu2nn7tdokqdxy6c3gx)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bzip2-1.0.8-e7n5ge (external bzip2-1.0.8-ms32l57ytvbcsrj3zhe3hban73lgynpm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libiconv-1.16-455jia
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/pkgconf-1.8.0-q4mt2x
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/xz-5.2.7-qy7gxu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/zlib-1.2.13-7d6hpk (external zlib-1.2.13-ogdpwovxjavmphqzlyrjfggoexpa4di2)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ncurses-6.3-mslafi (external ncurses-6.3-kjtivgwlm2tlta25c64eo7gxvxlxj7td)
[+] /usr (external tar-1.28-3mknztmfmrpum3mzcmd2rk7vvf76cskj)
==> hpe-mpi@2.25.hmpt : has external module in ['hpe-mpi/2.25.hmpt']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/hpe-mpi-2.25.hmpt-bvghnw (external hpe-mpi-2.25.hmpt-qk754fsip5huicz34oar3tlywrt5q2hf)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
==> intel-oneapi-mkl@2021.4.0 : has external module in ['intel-oneapi-mkl/2021.4.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/intel-oneapi-mkl-2021.4.0-q7vl7m (external intel-oneapi-mkl-2021.4.0-fnkrysrw7agok7ie2ffw2psaxrrcygjm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/readline-8.1.2-kapavr (external readline-8.1.2-ht7d3fjkgkkonyn5cozpooil4pjqhu5n)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libxml2-2.10.1-sktzpi
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/hdf5-1.14.0-h22zdq
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/gettext-0.21.1-xztjur
==> Installing libsonata-report-develop-nzx2keqp7jfuumndiicth4arkgyjszzo
==> No binary for libsonata-report-develop-nzx2keqp7jfuumndiicth4arkgyjszzo found: installing from source
==> No patches needed for libsonata-report
==> libsonata-report: Executing phase: 'cmake'
==> libsonata-report: Executing phase: 'build'
==> libsonata-report: Executing phase: 'install'
==> libsonata-report: Successfully installed libsonata-report-develop-nzx2keqp7jfuumndiicth4arkgyjszzo
  Fetch: 2.93s.  Build: 5.10s.  Total: 8.03s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/libsonata-report-develop-nzx2ke
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-coverage-6.4.4-6pjz7m
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpi4py-3.1.4-glx4cf
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-numpy-1.22.4-ly6cmf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-cov-3.0.0-ua7apk
==> Installing neuron-develop-nnpvp4lctqemxk4feqkcyndwdbymixl2
==> No binary for neuron-develop-nnpvp4lctqemxk4feqkcyndwdbymixl2 found: installing from source
==> No patches needed for neuron
==> neuron: Executing phase: 'cmake'
==> neuron: Executing phase: 'build'
==> neuron: Executing phase: 'install'
==> neuron: Successfully installed neuron-develop-nnpvp4lctqemxk4feqkcyndwdbymixl2
  Fetch: 32.56s.  Build: 31m 54.32s.  Total: 32m 26.88s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_oneapi-2022.2.1-skylake/neuron-develop-nnpvp4
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be nnpvp4lctqemxk4feqkcyndwdbymixl2
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:          /nvme/bbpcihpcproj12/1854018/ccache
  Primary config:           /nvme/bbpcihpcproj12/1854018/ccache/ccache.conf
  Secondary config:         /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:            Sat Oct 21 00:21:02 2023
  Hits:                       816 /  884 (92.31 %)
    Direct:                   379 /  888 (42.68 %)
    Preprocessed:             437 /  508 (86.02 %)
  Misses:                      68
    Direct:                   509
    Preprocessed:              71
  Uncacheable:                845
Primary storage:
  Hits:                      1450 / 1775 (81.69 %)
  Misses:                     325
  Cache size (GB):           0.47 / 0.51 (91.97 %)
  Files:                    13161
Uncacheable:
  Autoconf compile/link:        5
  Called for linking:         817
  Called for preprocessing:     1
  Compilation failed:           3
  No input file:               18
  Preprocessing failed:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697840467:step_script
section_start:1697840467:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:neuron:nmodl:intel:shared-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=268907 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Aneuron%3Anmodl%3Aintel%3Ashared-1-non_protected 
Created cache
section_end:1697840487:archive_cache
section_start:1697840487:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=270215 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980025 responseStatus=201 Created token=64_x1Dam
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=270282 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980025 responseStatus=201 Created token=64_x1Dam
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=270342 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980025 responseStatus=201 Created token=64_x1Dam
section_end:1697840489:upload_artifacts_on_success
section_start:1697840489:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697840490:cleanup_file_variables
Job succeeded

build-neuron-nmodl-nvhpc-acc-legacy.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838335:resolve_secrets
Resolving secrets
section_end:1697838335:resolve_secrets
section_start:1697838335:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor820380652, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980026
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980026_PROD_P2160_CP4_C5
Job parameters: memory=76G, cpus_per_task=8, duration=2:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854019
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980026_PROD_P2160_CP4_C5 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=2:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854019 --cpus-per-task=8 --mem=76G     
section_end:1697838337:prepare_executor
section_start:1697838337:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n22 via bbpv1.epfl.ch...
section_end:1697838342:prepare_script
section_start:1697838342:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838343:get_sources
section_start:1697838343:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:neuron:nmodl:nvhpc:acc:legacy-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=221210 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838348:restore_cache
section_start:1697838348:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for build:nmodl (980023)...
Runtime platform                                    arch=amd64 os=linux pid=222787 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980023 responseStatus=200 OK token=64_95bzn
section_end:1697838349:download_artifacts
section_start:1697838349:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980026/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980026/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980026/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980026/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980026/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980026/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980026_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install neuron%nvhpc ~rx3d~caliper+gpu+coreneuron~legacy-unit~openmp~shared~sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy  ^/zeh2ipk4tt36kewayr3sixulngvqmrxw
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854019/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854019/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:45:53 2023
  Hits:                 0 /    0
    Direct:             0 /    0
    Preprocessed:       0 /    0
  Misses:               0
    Direct:             0
    Preprocessed:       0
Primary storage:
  Hits:                 0 /    0
  Misses:               0
  Cache size (GB):   0.47 / 0.51 (91.87 %)
  Files:            15705
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   neuron%nvhpc~caliper+coreneuron+gpu~legacy-unit~openmp~rx3d~shared~sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy
[+]      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]                  ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]              ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]          ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

Concretized
--------------------------------
 -   pugaigs  neuron@develop%nvhpc@23.1~caliper~codegenopt+coreneuron+gpu~interviews~ipo~knl+legacy-fr~legacy-unit+memacs+mod-compatibility+mpi~openmp~prcellstate+python+report~rx3d~shared~sympy~sympyopt+tests~unified build_system=cmake build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy sanitizers=None arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3gsnkau      ^boost@1.80.0%gcc@12.2.0~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug~exception~fiber+filesystem~graph~graph_parallel~icu~iostreams~json~locale~log~math~mpi+multithreaded~nowide~numpy+pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded~stacktrace~system~taggedlayout+test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  ajstvdu      ^cuda@12.0.0%gcc@12.2.0~allow-unsupported-compilers~dev build_system=generic arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  xztjuru      ^gettext@0.21.1%gcc@12.2.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-rhel7-skylake
[^]  ms32l57          ^bzip2@1.0.8%gcc@12.2.0~debug~pic+shared build_system=generic arch=linux-rhel7-skylake
[^]  455jiaa          ^libiconv@1.16%gcc@12.2.0 build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  sktzpiy          ^libxml2@2.10.1%gcc@12.2.0~python build_system=autotools arch=linux-rhel7-skylake
[^]  q4mt2xu              ^pkgconf@1.8.0%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  ogdpwov              ^zlib@1.2.13%gcc@12.2.0+optimize+pic+shared build_system=makefile arch=linux-rhel7-skylake
[^]  3mknztm          ^tar@1.28%gcc@12.2.0 build_system=autotools patches=08921fc,125cd61,5c314db,d428578 zip=pigz arch=linux-rhel7-skylake
[^]  qy7gxuh          ^xz@5.2.7%gcc@12.2.0~pic build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  qk754fs      ^hpe-mpi@2.25.hmpt%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
 -   nzx2keq      ^libsonata-report@develop%gcc@12.2.0~ipo+mpi build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  h22zdqe          ^hdf5@1.14.0%gcc@12.2.0+cxx~fortran+hl~ipo~java~map+mpi~page_buffer_patch+shared~szip~threadsafe+tools api=default build_system=cmake build_type=RelWithDebInfo patches=0b5dd6f arch=linux-rhel7-skylake
[^]  xfi3vdr          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  kjtivgw      ^ncurses@6.3%gcc@12.2.0~symlinks+termlib abi=none build_system=autotools arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[+]  zeh2ipk      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7v6k26x          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  t7yyhxk          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  ee7ugzv          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  pi3gdaj          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  d4xzk5t          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  glx4cfn      ^py-mpi4py@3.1.4%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ly6cmfc      ^py-numpy@1.22.4%gcc@12.2.0+blas+lapack build_system=python_pip patches=873745d arch=linux-rhel7-skylake
[^]  fnkrysr          ^intel-oneapi-mkl@2021.4.0%gcc@12.2.0~cluster~ilp64+shared build_system=generic arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h      ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki          ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb      ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ua7apk4      ^py-pytest-cov@3.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6pjz7mt          ^py-coverage@6.4.4%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  ht7d3fj      ^readline@8.1.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/boost-1.80.0-3bzblf (external boost-1.80.0-3gsnkau2ceycwyu2nn7tdokqdxy6c3gx)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> cuda@12.0.0 : has external module in ['cuda/12.0.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cuda-12.0.0-4amlih (external cuda-12.0.0-ajstvduqrwv4fljodkrtycsn5atyd44t)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bzip2-1.0.8-e7n5ge (external bzip2-1.0.8-ms32l57ytvbcsrj3zhe3hban73lgynpm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libiconv-1.16-455jia
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/pkgconf-1.8.0-q4mt2x
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/xz-5.2.7-qy7gxu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/zlib-1.2.13-7d6hpk (external zlib-1.2.13-ogdpwovxjavmphqzlyrjfggoexpa4di2)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ncurses-6.3-mslafi (external ncurses-6.3-kjtivgwlm2tlta25c64eo7gxvxlxj7td)
[+] /usr (external tar-1.28-3mknztmfmrpum3mzcmd2rk7vvf76cskj)
==> hpe-mpi@2.25.hmpt : has external module in ['hpe-mpi/2.25.hmpt']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/hpe-mpi-2.25.hmpt-bvghnw (external hpe-mpi-2.25.hmpt-qk754fsip5huicz34oar3tlywrt5q2hf)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
==> intel-oneapi-mkl@2021.4.0 : has external module in ['intel-oneapi-mkl/2021.4.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/intel-oneapi-mkl-2021.4.0-q7vl7m (external intel-oneapi-mkl-2021.4.0-fnkrysrw7agok7ie2ffw2psaxrrcygjm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/readline-8.1.2-kapavr (external readline-8.1.2-ht7d3fjkgkkonyn5cozpooil4pjqhu5n)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libxml2-2.10.1-sktzpi
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/hdf5-1.14.0-h22zdq
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/gettext-0.21.1-xztjur
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpi4py-3.1.4-glx4cf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-coverage-6.4.4-6pjz7m
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-numpy-1.22.4-ly6cmf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-cov-3.0.0-ua7apk
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/libsonata-report-develop-nzx2ke
==> Installing neuron-develop-pugaigssqv3exgq6u2b2whi64l5macvt
==> No binary for neuron-develop-pugaigssqv3exgq6u2b2whi64l5macvt found: installing from source
==> No patches needed for neuron
==> neuron: Executing phase: 'cmake'
==> neuron: Executing phase: 'build'
==> neuron: Executing phase: 'install'
==> neuron: Successfully installed neuron-develop-pugaigssqv3exgq6u2b2whi64l5macvt
  Fetch: 20.54s.  Build: 45m 47.90s.  Total: 46m 8.44s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_nvhpc-23.1-skylake/neuron-develop-pugaig
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be pugaigssqv3exgq6u2b2whi64l5macvt
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:          /nvme/bbpcihpcproj12/1854019/ccache
  Primary config:           /nvme/bbpcihpcproj12/1854019/ccache/ccache.conf
  Secondary config:         /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:            Sat Oct 21 00:34:32 2023
  Hits:                       794 /  911 (87.16 %)
    Direct:                   358 /  865 (41.39 %)
    Preprocessed:             436 /  506 (86.17 %)
  Misses:                     117
    Direct:                   507
    Preprocessed:              70
  Uncacheable:                109
Primary storage:
  Hits:                      1406 / 1729 (81.32 %)
  Misses:                     323
  Cache size (GB):           0.46 / 0.51 (90.61 %)
  Files:                    15576
  Cleanups:                     2
Uncacheable:
  Autoconf compile/link:        5
  Called for linking:          90
  Called for preprocessing:     2
  Compilation failed:           3
  No input file:                8
  Preprocessing failed:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697841274:step_script
section_start:1697841274:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:neuron:nmodl:nvhpc:acc:legacy-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=298929 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Aneuron%3Anmodl%3Anvhpc%3Aacc%3Alegacy-1-non_protected 
Created cache
section_end:1697841292:archive_cache
section_start:1697841292:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=300820 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980026 responseStatus=201 Created token=64_95bzn
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=300895 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980026 responseStatus=201 Created token=64_95bzn
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=300967 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980026 responseStatus=201 Created token=64_95bzn
section_end:1697841294:upload_artifacts_on_success
section_start:1697841294:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697841295:cleanup_file_variables
Job succeeded

build-neuron-nmodl-nvhpc-acc-shared.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838336:resolve_secrets
Resolving secrets
section_end:1697838336:resolve_secrets
section_start:1697838336:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor4079859119, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980027
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980027_PROD_P2160_CP5_C6
Job parameters: memory=76G, cpus_per_task=8, duration=2:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854020
job state: PD
job state: PD
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980027_PROD_P2160_CP5_C6 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=2:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854020 --cpus-per-task=8 --mem=76G     
section_end:1697838339:prepare_executor
section_start:1697838339:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n22 via bbpv1.epfl.ch...
section_end:1697838340:prepare_script
section_start:1697838340:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838341:get_sources
section_start:1697838341:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:neuron:nmodl:nvhpc:acc:shared-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=221060 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838347:restore_cache
section_start:1697838347:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for build:nmodl (980023)...
Runtime platform                                    arch=amd64 os=linux pid=221536 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980023 responseStatus=200 OK token=64_6ipr4
section_end:1697838347:download_artifacts
section_start:1697838347:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980027/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980027/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980027/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980027/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980027/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980027/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980027_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install neuron%nvhpc ~rx3d~caliper+gpu+coreneuron~legacy-unit~openmp+shared+sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy  ^/zeh2ipk4tt36kewayr3sixulngvqmrxw
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854020/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854020/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:45:52 2023
  Hits:                 0 /    0
    Direct:             0 /    0
    Preprocessed:       0 /    0
  Misses:               0
    Direct:             0
    Preprocessed:       0
Primary storage:
  Hits:                 0 /    0
  Misses:               0
  Cache size (GB):   0.44 / 0.51 (86.62 %)
  Files:            16088
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   neuron%nvhpc~caliper+coreneuron+gpu~legacy-unit~openmp~rx3d+shared+sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy
[+]      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]                  ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]              ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]          ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

Concretized
--------------------------------
 -   3cwpg77  neuron@develop%nvhpc@23.1~caliper~codegenopt+coreneuron+gpu~interviews~ipo~knl+legacy-fr~legacy-unit+memacs+mod-compatibility+mpi~openmp~prcellstate+python+report~rx3d+shared+sympy~sympyopt+tests~unified build_system=cmake build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy sanitizers=None arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3gsnkau      ^boost@1.80.0%gcc@12.2.0~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug~exception~fiber+filesystem~graph~graph_parallel~icu~iostreams~json~locale~log~math~mpi+multithreaded~nowide~numpy+pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded~stacktrace~system~taggedlayout+test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  ajstvdu      ^cuda@12.0.0%gcc@12.2.0~allow-unsupported-compilers~dev build_system=generic arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  xztjuru      ^gettext@0.21.1%gcc@12.2.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-rhel7-skylake
[^]  ms32l57          ^bzip2@1.0.8%gcc@12.2.0~debug~pic+shared build_system=generic arch=linux-rhel7-skylake
[^]  455jiaa          ^libiconv@1.16%gcc@12.2.0 build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  sktzpiy          ^libxml2@2.10.1%gcc@12.2.0~python build_system=autotools arch=linux-rhel7-skylake
[^]  q4mt2xu              ^pkgconf@1.8.0%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  ogdpwov              ^zlib@1.2.13%gcc@12.2.0+optimize+pic+shared build_system=makefile arch=linux-rhel7-skylake
[^]  3mknztm          ^tar@1.28%gcc@12.2.0 build_system=autotools patches=08921fc,125cd61,5c314db,d428578 zip=pigz arch=linux-rhel7-skylake
[^]  qy7gxuh          ^xz@5.2.7%gcc@12.2.0~pic build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  qk754fs      ^hpe-mpi@2.25.hmpt%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
 -   nzx2keq      ^libsonata-report@develop%gcc@12.2.0~ipo+mpi build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  h22zdqe          ^hdf5@1.14.0%gcc@12.2.0+cxx~fortran+hl~ipo~java~map+mpi~page_buffer_patch+shared~szip~threadsafe+tools api=default build_system=cmake build_type=RelWithDebInfo patches=0b5dd6f arch=linux-rhel7-skylake
[^]  xfi3vdr          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  kjtivgw      ^ncurses@6.3%gcc@12.2.0~symlinks+termlib abi=none build_system=autotools arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[+]  zeh2ipk      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7v6k26x          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  t7yyhxk          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  ee7ugzv          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  pi3gdaj          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  d4xzk5t          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  glx4cfn      ^py-mpi4py@3.1.4%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ly6cmfc      ^py-numpy@1.22.4%gcc@12.2.0+blas+lapack build_system=python_pip patches=873745d arch=linux-rhel7-skylake
[^]  fnkrysr          ^intel-oneapi-mkl@2021.4.0%gcc@12.2.0~cluster~ilp64+shared build_system=generic arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h      ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki          ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb      ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ua7apk4      ^py-pytest-cov@3.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6pjz7mt          ^py-coverage@6.4.4%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  ht7d3fj      ^readline@8.1.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/boost-1.80.0-3bzblf (external boost-1.80.0-3gsnkau2ceycwyu2nn7tdokqdxy6c3gx)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> cuda@12.0.0 : has external module in ['cuda/12.0.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cuda-12.0.0-4amlih (external cuda-12.0.0-ajstvduqrwv4fljodkrtycsn5atyd44t)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bzip2-1.0.8-e7n5ge (external bzip2-1.0.8-ms32l57ytvbcsrj3zhe3hban73lgynpm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libiconv-1.16-455jia
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/pkgconf-1.8.0-q4mt2x
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/xz-5.2.7-qy7gxu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/zlib-1.2.13-7d6hpk (external zlib-1.2.13-ogdpwovxjavmphqzlyrjfggoexpa4di2)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ncurses-6.3-mslafi (external ncurses-6.3-kjtivgwlm2tlta25c64eo7gxvxlxj7td)
[+] /usr (external tar-1.28-3mknztmfmrpum3mzcmd2rk7vvf76cskj)
==> hpe-mpi@2.25.hmpt : has external module in ['hpe-mpi/2.25.hmpt']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/hpe-mpi-2.25.hmpt-bvghnw (external hpe-mpi-2.25.hmpt-qk754fsip5huicz34oar3tlywrt5q2hf)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
==> intel-oneapi-mkl@2021.4.0 : has external module in ['intel-oneapi-mkl/2021.4.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/intel-oneapi-mkl-2021.4.0-q7vl7m (external intel-oneapi-mkl-2021.4.0-fnkrysrw7agok7ie2ffw2psaxrrcygjm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/readline-8.1.2-kapavr (external readline-8.1.2-ht7d3fjkgkkonyn5cozpooil4pjqhu5n)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libxml2-2.10.1-sktzpi
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/hdf5-1.14.0-h22zdq
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/gettext-0.21.1-xztjur
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-coverage-6.4.4-6pjz7m
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpi4py-3.1.4-glx4cf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-numpy-1.22.4-ly6cmf
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-cov-3.0.0-ua7apk
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/libsonata-report-develop-nzx2ke
==> Installing neuron-develop-3cwpg77qhbsitjarhcu7c76g53ytqbrw
==> No binary for neuron-develop-3cwpg77qhbsitjarhcu7c76g53ytqbrw found: installing from source
==> No patches needed for neuron
==> neuron: Executing phase: 'cmake'
==> neuron: Executing phase: 'build'
==> neuron: Executing phase: 'install'
==> neuron: Successfully installed neuron-develop-3cwpg77qhbsitjarhcu7c76g53ytqbrw
  Fetch: 22.47s.  Build: 45m 58.48s.  Total: 46m 20.95s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_nvhpc-23.1-skylake/neuron-develop-3cwpg7
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be 3cwpg77qhbsitjarhcu7c76g53ytqbrw
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:          /nvme/bbpcihpcproj12/1854020/ccache
  Primary config:           /nvme/bbpcihpcproj12/1854020/ccache/ccache.conf
  Secondary config:         /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:            Sat Oct 21 00:34:44 2023
  Hits:                       794 /  979 (81.10 %)
    Direct:                   358 /  865 (41.39 %)
    Preprocessed:             436 /  506 (86.17 %)
  Misses:                     185
    Direct:                   507
    Preprocessed:              70
  Uncacheable:                118
Primary storage:
  Hits:                      1406 / 1729 (81.32 %)
  Misses:                     323
  Cache size (GB):           0.45 / 0.51 (87.97 %)
  Files:                    16541
Uncacheable:
  Autoconf compile/link:        5
  Called for linking:          99
  Called for preprocessing:     2
  Compilation failed:           3
  No input file:                8
  Preprocessing failed:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697841285:step_script
section_start:1697841285:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:neuron:nmodl:nvhpc:acc:shared-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=300440 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Aneuron%3Anmodl%3Anvhpc%3Aacc%3Ashared-1-non_protected 
Created cache
section_end:1697841303:archive_cache
section_start:1697841303:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=301950 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980027 responseStatus=201 Created token=64_6ipr4
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=301993 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980027 responseStatus=201 Created token=64_6ipr4
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=302079 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980027 responseStatus=201 Created token=64_6ipr4
section_end:1697841305:upload_artifacts_on_success
section_start:1697841305:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697841306:cleanup_file_variables
Job succeeded

build-neuron-nmodl-nvhpc-omp-legacy.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838336:resolve_secrets
Resolving secrets
section_end:1697838336:resolve_secrets
section_start:1697838336:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor4201430140, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980028
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980028_PROD_P2160_CP6_C7
Job parameters: memory=76G, cpus_per_task=8, duration=2:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854021
job state: PD
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980028_PROD_P2160_CP6_C7 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=2:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854021 --cpus-per-task=8 --mem=76G     
section_end:1697838339:prepare_executor
section_start:1697838339:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n12 via bbpv1.epfl.ch...
section_end:1697838342:prepare_script
section_start:1697838342:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838343:get_sources
section_start:1697838343:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:neuron:nmodl:nvhpc:omp:legacy-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=174710 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838349:restore_cache
section_start:1697838349:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for build:nmodl (980023)...
Runtime platform                                    arch=amd64 os=linux pid=174959 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980023 responseStatus=200 OK token=64_CWpe3
section_end:1697838350:download_artifacts
section_start:1697838350:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980028/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980028/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980028/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980028/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980028/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980028/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980028_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install neuron%nvhpc ~rx3d+caliper+gpu+coreneuron~legacy-unit+openmp~shared~sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy ^caliper+cuda cuda_arch=70  ^/zeh2ipk4tt36kewayr3sixulngvqmrxw
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854021/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854021/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:45:55 2023
  Hits:                 0 /    0
    Direct:             0 /    0
    Preprocessed:       0 /    0
  Misses:               0
    Direct:             0
    Preprocessed:       0
Primary storage:
  Hits:                 0 /    0
  Misses:               0
  Cache size (GB):   0.47 / 0.51 (91.28 %)
  Files:            16667
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   neuron%nvhpc+caliper+coreneuron+gpu~legacy-unit+openmp~rx3d~shared~sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy
 -       ^caliper+cuda cuda_arch=70
[+]      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]                  ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]              ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]          ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

Concretized
--------------------------------
 -   jtfemeb  neuron@develop%nvhpc@23.1+caliper~codegenopt+coreneuron+gpu~interviews~ipo~knl+legacy-fr~legacy-unit+memacs+mod-compatibility+mpi+openmp~prcellstate+python+report~rx3d~shared~sympy~sympyopt+tests~unified build_system=cmake build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy sanitizers=None arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3gsnkau      ^boost@1.80.0%gcc@12.2.0~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug~exception~fiber+filesystem~graph~graph_parallel~icu~iostreams~json~locale~log~math~mpi+multithreaded~nowide~numpy+pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded~stacktrace~system~taggedlayout+test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-rhel7-skylake
[^]  jdv6mlw      ^caliper@2.8.0%gcc@12.2.0+adiak+cuda~fortran+gotcha~ipo+libdw~libpfm+libunwind+mpi+papi~rocm+sampler+shared~sosflow build_system=cmake build_type=RelWithDebInfo cuda_arch=70 arch=linux-rhel7-skylake
[^]  5floujd          ^adiak@0.2.2%gcc@12.2.0~ipo+mpi+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7yt5klx          ^elfutils@0.188%gcc@12.2.0~bzip2~debuginfod+nls~xz~zstd build_system=autotools arch=linux-rhel7-skylake
[^]  zttduab              ^m4@1.4.16%gcc@12.2.0+sigsegv build_system=autotools arch=linux-rhel7-skylake
[^]  ogdpwov              ^zlib@1.2.13%gcc@12.2.0+optimize+pic+shared build_system=makefile arch=linux-rhel7-skylake
[^]  ja6blio          ^libunwind@1.6.2%gcc@12.2.0~block_signals~conservative_checks~cxx_exceptions~debug~debug_frame+docs~pic+tests+weak_backtrace~xz~zlib build_system=autotools components=none libs=shared,static arch=linux-rhel7-skylake
[^]  3gsobub          ^papi@6.0.0.1%gcc@12.2.0~cuda+example~infiniband~lmsensors~nvml~powercap~rapl~rocm~rocm_smi~sde+shared~static_tools build_system=autotools arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  ajstvdu      ^cuda@12.0.0%gcc@12.2.0~allow-unsupported-compilers~dev build_system=generic arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  xztjuru      ^gettext@0.21.1%gcc@12.2.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-rhel7-skylake
[^]  ms32l57          ^bzip2@1.0.8%gcc@12.2.0~debug~pic+shared build_system=generic arch=linux-rhel7-skylake
[^]  455jiaa          ^libiconv@1.16%gcc@12.2.0 build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  sktzpiy          ^libxml2@2.10.1%gcc@12.2.0~python build_system=autotools arch=linux-rhel7-skylake
[^]  q4mt2xu              ^pkgconf@1.8.0%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3mknztm          ^tar@1.28%gcc@12.2.0 build_system=autotools patches=08921fc,125cd61,5c314db,d428578 zip=pigz arch=linux-rhel7-skylake
[^]  qy7gxuh          ^xz@5.2.7%gcc@12.2.0~pic build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  qk754fs      ^hpe-mpi@2.25.hmpt%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
 -   nzx2keq      ^libsonata-report@develop%gcc@12.2.0~ipo+mpi build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  h22zdqe          ^hdf5@1.14.0%gcc@12.2.0+cxx~fortran+hl~ipo~java~map+mpi~page_buffer_patch+shared~szip~threadsafe+tools api=default build_system=cmake build_type=RelWithDebInfo patches=0b5dd6f arch=linux-rhel7-skylake
[^]  xfi3vdr          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  kjtivgw      ^ncurses@6.3%gcc@12.2.0~symlinks+termlib abi=none build_system=autotools arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[+]  zeh2ipk      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7v6k26x          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  t7yyhxk          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  ee7ugzv          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  pi3gdaj          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  d4xzk5t          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  glx4cfn      ^py-mpi4py@3.1.4%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ly6cmfc      ^py-numpy@1.22.4%gcc@12.2.0+blas+lapack build_system=python_pip patches=873745d arch=linux-rhel7-skylake
[^]  fnkrysr          ^intel-oneapi-mkl@2021.4.0%gcc@12.2.0~cluster~ilp64+shared build_system=generic arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h      ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki          ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb      ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ua7apk4      ^py-pytest-cov@3.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6pjz7mt          ^py-coverage@6.4.4%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  ht7d3fj      ^readline@8.1.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/boost-1.80.0-3bzblf (external boost-1.80.0-3gsnkau2ceycwyu2nn7tdokqdxy6c3gx)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> hpe-mpi@2.25.hmpt : has external module in ['hpe-mpi/2.25.hmpt']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/hpe-mpi-2.25.hmpt-bvghnw (external hpe-mpi-2.25.hmpt-qk754fsip5huicz34oar3tlywrt5q2hf)
==> cuda@12.0.0 : has external module in ['cuda/12.0.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cuda-12.0.0-4amlih (external cuda-12.0.0-ajstvduqrwv4fljodkrtycsn5atyd44t)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bzip2-1.0.8-e7n5ge (external bzip2-1.0.8-ms32l57ytvbcsrj3zhe3hban73lgynpm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libiconv-1.16-455jia
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/pkgconf-1.8.0-q4mt2x
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/xz-5.2.7-qy7gxu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/zlib-1.2.13-7d6hpk (external zlib-1.2.13-ogdpwovxjavmphqzlyrjfggoexpa4di2)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ncurses-6.3-mslafi (external ncurses-6.3-kjtivgwlm2tlta25c64eo7gxvxlxj7td)
[+] /usr (external tar-1.28-3mknztmfmrpum3mzcmd2rk7vvf76cskj)
[+] /usr (external m4-1.4.16-zttduab7wfircnz7epbqj5ghrnfugdox)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libunwind-1.6.2-ja6bli
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/papi-6.0.0.1-3gsobu
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
==> intel-oneapi-mkl@2021.4.0 : has external module in ['intel-oneapi-mkl/2021.4.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/intel-oneapi-mkl-2021.4.0-q7vl7m (external intel-oneapi-mkl-2021.4.0-fnkrysrw7agok7ie2ffw2psaxrrcygjm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/readline-8.1.2-kapavr (external readline-8.1.2-ht7d3fjkgkkonyn5cozpooil4pjqhu5n)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/adiak-0.2.2-5flouj
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libxml2-2.10.1-sktzpi
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/hdf5-1.14.0-h22zdq
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/gettext-0.21.1-xztjur
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/libsonata-report-develop-nzx2ke
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/elfutils-0.188-7yt5kl
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-coverage-6.4.4-6pjz7m
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpi4py-3.1.4-glx4cf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/caliper-2.8.0-jdv6ml
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-numpy-1.22.4-ly6cmf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-cov-3.0.0-ua7apk
==> Installing neuron-develop-jtfemebejgqdlvdymiqhri7jnnptvuov
==> No binary for neuron-develop-jtfemebejgqdlvdymiqhri7jnnptvuov found: installing from source
==> No patches needed for neuron
==> neuron: Executing phase: 'cmake'
==> neuron: Executing phase: 'build'
==> neuron: Executing phase: 'install'
==> neuron: Successfully installed neuron-develop-jtfemebejgqdlvdymiqhri7jnnptvuov
  Fetch: 27.79s.  Build: 28m 46.05s.  Total: 29m 13.84s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_nvhpc-23.1-skylake/neuron-develop-jtfeme
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be jtfemebejgqdlvdymiqhri7jnnptvuov
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:          /nvme/bbpcihpcproj12/1854021/ccache
  Primary config:           /nvme/bbpcihpcproj12/1854021/ccache/ccache.conf
  Secondary config:         /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:            Sat Oct 21 00:17:34 2023
  Hits:                       794 /  921 (86.21 %)
    Direct:                   358 /  867 (41.29 %)
    Preprocessed:             436 /  508 (85.83 %)
  Misses:                     127
    Direct:                   509
    Preprocessed:              72
  Uncacheable:                111
Primary storage:
  Hits:                      1406 / 1733 (81.13 %)
  Misses:                     327
  Cache size (GB):           0.45 / 0.51 (88.36 %)
  Files:                    16446
  Cleanups:                     3
Uncacheable:
  Autoconf compile/link:        5
  Called for linking:          92
  Called for preprocessing:     2
  Compilation failed:           3
  No input file:                8
  Preprocessing failed:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697840256:step_script
section_start:1697840256:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:neuron:nmodl:nvhpc:omp:legacy-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=208881 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Aneuron%3Anmodl%3Anvhpc%3Aomp%3Alegacy-1-non_protected 
Created cache
section_end:1697840274:archive_cache
section_start:1697840274:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=209062 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980028 responseStatus=201 Created token=64_CWpe3
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=209103 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980028 responseStatus=201 Created token=64_CWpe3
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=209155 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980028 responseStatus=201 Created token=64_CWpe3
section_end:1697840275:upload_artifacts_on_success
section_start:1697840275:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697840276:cleanup_file_variables
Job succeeded

build-neuron-nmodl-nvhpc-omp.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838337:resolve_secrets
Resolving secrets
section_end:1697838337:resolve_secrets
section_start:1697838337:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor3835200390, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980029
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980029_PROD_P2160_CP7_C8
Job parameters: memory=76G, cpus_per_task=8, duration=2:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854022
job state: PD
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980029_PROD_P2160_CP7_C8 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=2:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854022 --cpus-per-task=8 --mem=76G     
section_end:1697838339:prepare_executor
section_start:1697838339:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n12 via bbpv1.epfl.ch...
section_end:1697838342:prepare_script
section_start:1697838342:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838343:get_sources
section_start:1697838343:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:neuron:nmodl:nvhpc:omp-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=174748 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838349:restore_cache
section_start:1697838349:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for build:nmodl (980023)...
Runtime platform                                    arch=amd64 os=linux pid=174902 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980023 responseStatus=200 OK token=64_7b8XH
section_end:1697838350:download_artifacts
section_start:1697838350:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980029/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980029/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980029/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980029/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980029/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980029/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980029_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install neuron%nvhpc ~rx3d+caliper+gpu+coreneuron~legacy-unit+openmp~shared+sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy ^caliper+cuda cuda_arch=70  ^/zeh2ipk4tt36kewayr3sixulngvqmrxw
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854022/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854022/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:45:54 2023
  Hits:                 0 /    0
    Direct:             0 /    0
    Preprocessed:       0 /    0
  Misses:               0
    Direct:             0
    Preprocessed:       0
Primary storage:
  Hits:                 0 /    0
  Misses:               0
  Cache size (GB):   0.45 / 0.51 (88.60 %)
  Files:            15430
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   neuron%nvhpc+caliper+coreneuron+gpu~legacy-unit+openmp~rx3d~shared+sympy+tests~unified build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy
 -       ^caliper+cuda cuda_arch=70
[+]      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]          ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]                  ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]              ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]          ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]              ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]          ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

Concretized
--------------------------------
 -   4sct65a  neuron@develop%nvhpc@23.1+caliper~codegenopt+coreneuron+gpu~interviews~ipo~knl+legacy-fr~legacy-unit+memacs+mod-compatibility+mpi+openmp~prcellstate+python+report~rx3d~shared+sympy~sympyopt+tests~unified build_system=cmake build_type=FastDebug model_tests=channel-benchmark,olfactory,tqperf-heavy sanitizers=None arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3gsnkau      ^boost@1.80.0%gcc@12.2.0~atomic~chrono~clanglibcpp~container~context~contract~coroutine~date_time~debug~exception~fiber+filesystem~graph~graph_parallel~icu~iostreams~json~locale~log~math~mpi+multithreaded~nowide~numpy+pic~program_options~python~random~regex~serialization+shared~signals~singlethreaded~stacktrace~system~taggedlayout+test~thread~timer~type_erasure~versionedlayout~wave build_system=generic cxxstd=98 patches=a440f96 visibility=hidden arch=linux-rhel7-skylake
[^]  jdv6mlw      ^caliper@2.8.0%gcc@12.2.0+adiak+cuda~fortran+gotcha~ipo+libdw~libpfm+libunwind+mpi+papi~rocm+sampler+shared~sosflow build_system=cmake build_type=RelWithDebInfo cuda_arch=70 arch=linux-rhel7-skylake
[^]  5floujd          ^adiak@0.2.2%gcc@12.2.0~ipo+mpi+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7yt5klx          ^elfutils@0.188%gcc@12.2.0~bzip2~debuginfod+nls~xz~zstd build_system=autotools arch=linux-rhel7-skylake
[^]  zttduab              ^m4@1.4.16%gcc@12.2.0+sigsegv build_system=autotools arch=linux-rhel7-skylake
[^]  ogdpwov              ^zlib@1.2.13%gcc@12.2.0+optimize+pic+shared build_system=makefile arch=linux-rhel7-skylake
[^]  ja6blio          ^libunwind@1.6.2%gcc@12.2.0~block_signals~conservative_checks~cxx_exceptions~debug~debug_frame+docs~pic+tests+weak_backtrace~xz~zlib build_system=autotools components=none libs=shared,static arch=linux-rhel7-skylake
[^]  3gsobub          ^papi@6.0.0.1%gcc@12.2.0~cuda+example~infiniband~lmsensors~nvml~powercap~rapl~rocm~rocm_smi~sde+shared~static_tools build_system=autotools arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  ajstvdu      ^cuda@12.0.0%gcc@12.2.0~allow-unsupported-compilers~dev build_system=generic arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  xztjuru      ^gettext@0.21.1%gcc@12.2.0+bzip2+curses+git~libunistring+libxml2+tar+xz build_system=autotools arch=linux-rhel7-skylake
[^]  ms32l57          ^bzip2@1.0.8%gcc@12.2.0~debug~pic+shared build_system=generic arch=linux-rhel7-skylake
[^]  455jiaa          ^libiconv@1.16%gcc@12.2.0 build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  sktzpiy          ^libxml2@2.10.1%gcc@12.2.0~python build_system=autotools arch=linux-rhel7-skylake
[^]  q4mt2xu              ^pkgconf@1.8.0%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  3mknztm          ^tar@1.28%gcc@12.2.0 build_system=autotools patches=08921fc,125cd61,5c314db,d428578 zip=pigz arch=linux-rhel7-skylake
[^]  qy7gxuh          ^xz@5.2.7%gcc@12.2.0~pic build_system=autotools libs=shared,static arch=linux-rhel7-skylake
[^]  qk754fs      ^hpe-mpi@2.25.hmpt%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
 -   nzx2keq      ^libsonata-report@develop%gcc@12.2.0~ipo+mpi build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  h22zdqe          ^hdf5@1.14.0%gcc@12.2.0+cxx~fortran+hl~ipo~java~map+mpi~page_buffer_patch+shared~szip~threadsafe+tools api=default build_system=cmake build_type=RelWithDebInfo patches=0b5dd6f arch=linux-rhel7-skylake
[^]  xfi3vdr          ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  kjtivgw      ^ncurses@6.3%gcc@12.2.0~symlinks+termlib abi=none build_system=autotools arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[+]  zeh2ipk      ^nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  7v6k26x          ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to          ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  t7yyhxk          ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  ee7ugzv          ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck          ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f              ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  pi3gdaj          ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  d4xzk5t          ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub              ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  glx4cfn      ^py-mpi4py@3.1.4%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ly6cmfc      ^py-numpy@1.22.4%gcc@12.2.0+blas+lapack build_system=python_pip patches=873745d arch=linux-rhel7-skylake
[^]  fnkrysr          ^intel-oneapi-mkl@2021.4.0%gcc@12.2.0~cluster~ilp64+shared build_system=generic arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h      ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki          ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb      ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ua7apk4      ^py-pytest-cov@3.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6pjz7mt          ^py-coverage@6.4.4%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  ht7d3fj      ^readline@8.1.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/boost-1.80.0-3bzblf (external boost-1.80.0-3gsnkau2ceycwyu2nn7tdokqdxy6c3gx)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> hpe-mpi@2.25.hmpt : has external module in ['hpe-mpi/2.25.hmpt']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/hpe-mpi-2.25.hmpt-bvghnw (external hpe-mpi-2.25.hmpt-qk754fsip5huicz34oar3tlywrt5q2hf)
==> cuda@12.0.0 : has external module in ['cuda/12.0.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cuda-12.0.0-4amlih (external cuda-12.0.0-ajstvduqrwv4fljodkrtycsn5atyd44t)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bzip2-1.0.8-e7n5ge (external bzip2-1.0.8-ms32l57ytvbcsrj3zhe3hban73lgynpm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libiconv-1.16-455jia
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/pkgconf-1.8.0-q4mt2x
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/xz-5.2.7-qy7gxu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/zlib-1.2.13-7d6hpk (external zlib-1.2.13-ogdpwovxjavmphqzlyrjfggoexpa4di2)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ncurses-6.3-mslafi (external ncurses-6.3-kjtivgwlm2tlta25c64eo7gxvxlxj7td)
[+] /usr (external tar-1.28-3mknztmfmrpum3mzcmd2rk7vvf76cskj)
[+] /usr (external m4-1.4.16-zttduab7wfircnz7epbqj5ghrnfugdox)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libunwind-1.6.2-ja6bli
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/papi-6.0.0.1-3gsobu
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
==> intel-oneapi-mkl@2021.4.0 : has external module in ['intel-oneapi-mkl/2021.4.0']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/intel-oneapi-mkl-2021.4.0-q7vl7m (external intel-oneapi-mkl-2021.4.0-fnkrysrw7agok7ie2ffw2psaxrrcygjm)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/readline-8.1.2-kapavr (external readline-8.1.2-ht7d3fjkgkkonyn5cozpooil4pjqhu5n)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/adiak-0.2.2-5flouj
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/hdf5-1.14.0-h22zdq
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libxml2-2.10.1-sktzpi
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/gettext-0.21.1-xztjur
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/elfutils-0.188-7yt5kl
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpi4py-3.1.4-glx4cf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-coverage-6.4.4-6pjz7m
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/libsonata-report-develop-nzx2ke
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/caliper-2.8.0-jdv6ml
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-cov-3.0.0-ua7apk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-numpy-1.22.4-ly6cmf
==> Installing neuron-develop-4sct65ajwn5fw755d6hrxif6kkfx5hq7
==> No binary for neuron-develop-4sct65ajwn5fw755d6hrxif6kkfx5hq7 found: installing from source
==> No patches needed for neuron
==> neuron: Executing phase: 'cmake'
==> neuron: Executing phase: 'build'
==> neuron: Executing phase: 'install'
==> neuron: Successfully installed neuron-develop-4sct65ajwn5fw755d6hrxif6kkfx5hq7
  Fetch: 22.47s.  Build: 28m 51.61s.  Total: 29m 14.08s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_nvhpc-23.1-skylake/neuron-develop-4sct65
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be 4sct65ajwn5fw755d6hrxif6kkfx5hq7
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:          /nvme/bbpcihpcproj12/1854022/ccache
  Primary config:           /nvme/bbpcihpcproj12/1854022/ccache/ccache.conf
  Secondary config:         /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:            Sat Oct 21 00:17:34 2023
  Hits:                       794 /  921 (86.21 %)
    Direct:                   358 /  867 (41.29 %)
    Preprocessed:             436 /  508 (85.83 %)
  Misses:                     127
    Direct:                   509
    Preprocessed:              72
  Uncacheable:                111
Primary storage:
  Hits:                      1406 / 1733 (81.13 %)
  Misses:                     327
  Cache size (GB):           0.46 / 0.51 (89.93 %)
  Files:                    15814
Uncacheable:
  Autoconf compile/link:        5
  Called for linking:          92
  Called for preprocessing:     2
  Compilation failed:           3
  No input file:                8
  Preprocessing failed:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697840256:step_script
section_start:1697840256:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:neuron:nmodl:nvhpc:omp-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=208936 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Aneuron%3Anmodl%3Anvhpc%3Aomp-1-non_protected 
Created cache
section_end:1697840275:archive_cache
section_start:1697840275:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=209254 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980029 responseStatus=201 Created token=64_7b8XH
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=209324 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980029 responseStatus=201 Created token=64_7b8XH
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=209403 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980029 responseStatus=201 Created token=64_7b8XH
section_end:1697840276:upload_artifacts_on_success
section_start:1697840276:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697840277:cleanup_file_variables
Job succeeded

build-nmodl.txt

Running with gitlab-runner 15.5.0 (0d4137b8)
  on BB5 map runner pnPo3yJy
section_start:1697838007:resolve_secrets
Resolving secrets
section_end:1697838007:resolve_secrets
section_start:1697838007:prepare_executor
Preparing the "custom" executor
Using Custom executor with driver BB5 PROD runner v0.0.3...
BB5 PROD runner running on bbpv1.epfl.ch, version 15.5.0, user 
TMPDIR is /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/tmp/custom-executor1177458598, slurm job id , CUSTOM_ENV_CI_RUNNER_TAGS is ["bb5_map"]
Runner ID 29, project root hpc, project name nrn
Pipeline ID 163887, build ref , job ID 980023
Build dir /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887, optional exclusive flag , optional cpus per task flag --cpus-per-task=8, optional qos flag , optional reservation flag 
A slurm job will be created with name GL_J980023_PROD_P2160_CP3_C1
Job parameters: memory=76G, cpus_per_task=8, duration=1:00:00, constraint=cpu ntasks=2 account=proj9998 user=bbpcihpcproj12 partition=prod qos= reservation=
Not executing the chown -R
sbatch: INFO: Activating auto partition selection plugin, please report errors to HPC/CS
sbatch: INFO: Job specifies cpu constraint, setting --constraint=[skl|clx]
Submitted batch job 1854014
job state: R
sbatch: sbatch -p prod -A proj9998 --ntasks=2 --cpus-per-task=8 --mem=76G    --job-name=GL_J980023_PROD_P2160_CP3_C1 -C cpu --no-requeue -D /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --time=1:00:00 --wrap="sleep infinity"
srun: srun --mpi=none --chdir=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887 --ntasks=2 --jobid=1854014 --cpus-per-task=8 --mem=76G     
section_end:1697838008:prepare_executor
section_start:1697838008:prepare_script
Preparing environment
Using git from spack modules
Running on r1i7n22 via bbpv1.epfl.ch...
section_end:1697838011:prepare_script
section_start:1697838011:get_sources
Getting source from Git repository
Using git from spack modules
Skipping Git repository setup
Skipping Git checkout
Skipping Git submodules setup
section_end:1697838012:get_sources
section_start:1697838012:restore_cache
Restoring cache
Using git from spack modules
Checking cache for build:nmodl-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=216420 revision=58ba2b95 version=14.2.0
cache.zip is up to date                            
Successfully extracted cache
section_end:1697838017:restore_cache
section_start:1697838017:download_artifacts
Downloading artifacts
Using git from spack modules
Downloading artifacts for spack_setup (980021)...
Runtime platform                                    arch=amd64 os=linux pid=216523 revision=58ba2b95 version=14.2.0
Downloading artifacts from coordinator... ok        id=980021 responseStatus=200 OK token=64_Zyw-M
section_end:1697838018:download_artifacts
section_start:1697838018:step_script
Executing "step_script" stage of the job script
WARNING: Starting with version 14.0 the 'build_script' stage will be replaced with 'step_script': https://gitlab.com/gitlab-org/gitlab-runner/-/issues/26426
Using git from spack modules
$ SPACK_BUILD="${PWD}/spack-build"
$ env -0 | sort -z | xargs -0 -L 1 echo > initial_environment.env
$ . ${SPACK_ROOT}/share/spack/setup-env.sh
$ export SPACK_USER_CONFIG_PATH=${PWD}/spack-config
$ mkdir ${SPACK_USER_CONFIG_PATH}
$ cat > ${SPACK_USER_CONFIG_PATH}/config.yaml << END_SCRIPT # collapsed multi-line command
$ spack ${SPACK_EXTRA_FLAGS} config add concretizer:reuse:false
$ spack ${SPACK_EXTRA_FLAGS} config blame config
---                                                                                                            config:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980023/spack-config/config.yaml:2                  build_stage:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980023/spack-config/config.yaml:3                  - /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980023/spack-build
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980023/spack-config/config.yaml:4                  source_cache: /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980023/spack-source-cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/config.yaml:2               ccache: True
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:2                                                             install_tree:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:3                                                               root: $user_cache_path/software
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:4                                                               projections:
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:5                                                                 all: install_{compiler.name}-{compiler.version}-{target}/{name}-{version}-{hash:6}
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:7                                                             environments_root: $user_cache_path/environments
/gpfs/bbp.cscs.ch/ssd/apps/bsd//config/config.yaml:9                                                             build_jobs: 8
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     extensions:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:18     - $spack/bluebrain/spack-scripting
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # This is the path to the root of the Spack install tree.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:19     # You can use $spack here to refer to the root of the spack instance.
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     template_dirs:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:37     - $spack/share/spack/templates
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:38     # Directory where licenses should be located
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:41     license_dir: $spack/etc/spack/licenses
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:76     test_stage: $user_cache_path/test
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:89     misc_cache: $user_cache_path/cache
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:95     connect_timeout: 10
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:100    verify_ssl: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:108    suppress_gpg_warnings: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:114    install_missing_compilers: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:119    checksum: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:124    deprecated: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:129    dirty: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:137    build_language: C
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:146    locks: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:151    url_fetch_method: urllib
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:180    concretizer: clingo
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:187    db_lock_timeout: 300
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:195    package_lock_timeout: null
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:200    shared_linking:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:205      type: rpath
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:211      bind: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:216    allow_sgid: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:221    terminal_title: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/config.yaml:225    binary_index_ttl: 600
_builtin                                                                                                         debug: False
$ spack ${SPACK_EXTRA_FLAGS} config blame concretizer
---                                                                                                                concretizer:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980023/spack-config/concretizer.yaml:2                 reuse: False
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:22    targets:
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:26      granularity: microarchitectures
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:30      host_compatible: True
/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/J980021/spack/etc/spack/defaults/concretizer.yaml:36    unify: True
$ export XDG_CONFIG_HOME=${CI_BUILDS_DIR}/J${CI_JOB_ID}_local_config
$ echo "Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (${XDG_CONFIG_HOME})"
Configuring git to use CI_JOB_TOKEN to access git@bbpgitlab.epfl.ch (/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs//bbpcihpcproj12/P163887/J980023_local_config)
$ mkdir -p "${XDG_CONFIG_HOME}/git"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = git@bbpgitlab.epfl.ch:" > "${XDG_CONFIG_HOME}/git/config"
$ echo -e "[url \"https://gitlab-ci-token:${CI_JOB_TOKEN}@bbpgitlab.epfl.ch/\"]\n  insteadOf = ssh://git@bbpgitlab.epfl.ch/" >> "${XDG_CONFIG_HOME}/git/config"
$ cat "${XDG_CONFIG_HOME}/git/config"
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = git@bbpgitlab.epfl.ch:
[url "https://gitlab-ci-token:[MASKED]@bbpgitlab.epfl.ch/"]
  insteadOf = ssh://git@bbpgitlab.epfl.ch/
$ SPACK_FULL_SPEC="${SPACK_PACKAGE}${SPACK_PACKAGE_COMPILER:+%}${SPACK_PACKAGE_COMPILER} ${SPACK_PACKAGE_SPEC} ${SPACK_PACKAGE_DEPENDENCIES} ${SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB}"
$ echo "Preparing to install ${SPACK_FULL_SPEC}"
Preparing to install nmodl%gcc ~legacy-unit  
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ module load unstable ccache
$ export CCACHE_BASEDIR=$(realpath -P ${CI_BUILDS_DIR})
$ echo CCACHE_BASEDIR=${CCACHE_BASEDIR}
CCACHE_BASEDIR=/gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887
$ export CCACHE_MAXSIZE=512M
$ export CCACHE_DIR="${TMPDIR}/ccache"
$ mkdir -p ${CCACHE_DIR}
$ if [ -f ${CI_PROJECT_DIR}/ccache.tar ]; then
$ tar -C "${CCACHE_DIR}" -xf "${CI_PROJECT_DIR}/ccache.tar"
$ fi
$ ccache --zero-stats
Statistics zeroed
$ ccache --show-stats --verbose
Summary:
  Cache directory:  /nvme/bbpcihpcproj12/1854014/ccache
  Primary config:   /nvme/bbpcihpcproj12/1854014/ccache/ccache.conf
  Secondary config: /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:    Fri Oct 20 23:40:21 2023
  Hits:                0 /    0
    Direct:            0 /    0
    Preprocessed:      0 /    0
  Misses:              0
    Direct:            0
    Preprocessed:      0
Primary storage:
  Hits:                0 /    0
  Misses:              0
  Cache size (GB):  0.45 / 0.51 (87.14 %)
  Files:            1358
$ fi
$ module load unstable git ${SPACK_EXTRA_MODULES}
$ spack ${SPACK_EXTRA_FLAGS} spec -Il ${SPACK_FULL_SPEC}
Input spec
--------------------------------
 -   nmodl%gcc~legacy-unit

Concretized
--------------------------------
 -   zeh2ipk  nmodl@develop%gcc@12.2.0~ipo~legacy-unit~llvm~llvm_cuda~python build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  sgwmsqz      ^bison@3.8.2%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  7v6k26x      ^catch2@3.0.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  u27b4to      ^cli11@2.1.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  vb7bdpg      ^cmake@3.24.3%gcc@12.2.0~doc+ncurses+ownlibs~qt build_system=generic build_type=Release arch=linux-rhel7-skylake
[^]  bbjadbi      ^flex@2.6.3%gcc@12.2.0+lex~nls build_system=autotools arch=linux-rhel7-skylake
[^]  t7yyhxk      ^fmt@9.1.0%gcc@12.2.0~ipo+pic~shared build_system=cmake build_type=RelWithDebInfo cxxstd=11 patches=08fb707 arch=linux-rhel7-skylake
[^]  zk4skox      ^ninja@1.11.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ee7ugzv      ^nlohmann-json@3.9.1%gcc@12.2.0~ipo+multiple_headers build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  3s7iuck      ^py-jinja2@3.1.2%gcc@12.2.0~i18n build_system=python_pip arch=linux-rhel7-skylake
[^]  d4uhr4f          ^py-markupsafe@2.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  3wgk4cb          ^py-pip@22.2.2%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  c6hdpvj          ^py-setuptools@63.0.0%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  ffmy45c          ^py-wheel@0.37.1%gcc@12.2.0 build_system=generic arch=linux-rhel7-skylake
[^]  pi3gdaj      ^py-pybind11@2.10.1%gcc@12.2.0~ipo build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake
[^]  uucrzmi      ^py-pytest@7.1.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  axib53z          ^py-attrs@22.1.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  s5xlzyb          ^py-iniconfig@1.1.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ugynn7h          ^py-packaging@21.3%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  4ld7fki              ^py-pyparsing@3.0.9%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  d7dkmvv                  ^py-flit-core@3.7.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  2zoh6fg          ^py-pluggy@1.0.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  a53pqvu          ^py-py@1.11.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  6tqbi2i          ^py-setuptools-scm@7.0.5%gcc@12.2.0+toml build_system=python_pip arch=linux-rhel7-skylake
[^]  c564cvo              ^py-typing-extensions@4.8.0%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  ksqdpfx          ^py-tomli@2.0.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  d4xzk5t      ^py-pyyaml@6.0%gcc@12.2.0+libyaml build_system=python_pip arch=linux-rhel7-skylake
[^]  skgytub          ^libyaml@0.2.5%gcc@12.2.0 build_system=autotools arch=linux-rhel7-skylake
[^]  bjojgfi          ^py-cython@0.29.32%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  oumzlg3      ^py-sympy@1.11.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  yqakowj          ^py-mpmath@1.2.1%gcc@12.2.0 build_system=python_pip arch=linux-rhel7-skylake
[^]  c2xj4m2      ^python@3.10.8%gcc@12.2.0+bz2+ctypes+dbm~debug+libxml2+lzma~nis~optimizations+pic+pyexpat+pythoncmd+readline+shared+sqlite3+ssl~tix~tkinter~ucs4+uuid+zlib build_system=generic patches=0d98e93,7d40923,f2fd060 arch=linux-rhel7-skylake
[^]  xfi3vdr      ^spdlog@1.10.0%gcc@12.2.0+fmt_external~ipo+shared build_system=cmake build_type=RelWithDebInfo arch=linux-rhel7-skylake

$ set -o pipefail
$ (spack ${SPACK_EXTRA_FLAGS} install --overwrite -y -j${SLURM_CPUS_PER_TASK} --log-format=junit --log-file=${CI_PROJECT_DIR}/install.xml --keep-stage ${SPACK_FULL_SPEC} | tee log) || install_failed=1
==> bison@3.8.2 : has external module in ['bison/3.8.2']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/bison-3.8.2-4q6ji4 (external bison-3.8.2-sgwmsqzphphzby2busuinegoak6lb3id)
==> cmake@3.24.3 : has external module in ['cmake/3.24.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/cmake-3.24.3-4blf3d (external cmake-3.24.3-vb7bdpgsupe5e2klkhkqos6vje2u4pns)
==> flex@2.6.3 : has external module in ['flex/2.6.3']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/flex-2.6.3-2jtkry (external flex-2.6.3-bbjadbirwaev3yr2guiy2u55ast426li)
==> ninja@1.11.1 : has external module in ['ninja/1.11.1']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ninja-1.11.1-o5qggc (external ninja-1.11.1-zk4skoxmkt7do2mk5lgnesas7ol3hhgg)
==> python@3.10.8 : has external module in ['python/3.10.8']
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/python-3.10.8-rvn6l5 (external python-3.10.8-c2xj4m2nyz6efq4m7arw3lneeqoz4z5m)
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/libyaml-0.2.5-skgytu
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/fmt-9.1.0-t7yyhx
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/nlohmann-json-3.9.1-ee7ugz
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/cli11-2.1.1-u27b4t
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/catch2-3.0.1-7v6k26
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pip-22.2.2-3wgk4c
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/spdlog-1.10.0-xfi3vd
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-wheel-0.37.1-ffmy45
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-63.0.0-c6hdpv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-flit-core-3.7.1-d7dkmv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-tomli-2.0.1-ksqdpf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-attrs-22.1.0-axib53
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-iniconfig-1.1.1-s5xlzy
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-markupsafe-2.1.1-d4uhr4
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pybind11-2.10.1-pi3gda
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-cython-0.29.32-bjojgf
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-typing-extensions-4.8.0-c564cv
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyparsing-3.0.9-4ld7fk
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-jinja2-3.1.2-3s7iuc
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pyyaml-6.0-d4xzk5
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-packaging-21.3-ugynn7
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-setuptools-scm-7.0.5-6tqbi2
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-mpmath-1.2.1-yqakow
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pluggy-1.0.0-2zoh6f
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-py-1.11.0-a53pqv
==> Warning: Expected user 904556 to own /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887, but it is owned by 0
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-sympy-1.11.1-oumzlg
[+] /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_applications/install_gcc-12.2.0-skylake/py-pytest-7.1.3-uucrzm
==> Installing nmodl-develop-zeh2ipk4tt36kewayr3sixulngvqmrxw
==> No binary for nmodl-develop-zeh2ipk4tt36kewayr3sixulngvqmrxw found: installing from source
==> No patches needed for nmodl
==> nmodl: Executing phase: 'cmake'
==> nmodl: Executing phase: 'build'
==> nmodl: Executing phase: 'install'
==> nmodl: Successfully installed nmodl-develop-zeh2ipk4tt36kewayr3sixulngvqmrxw
  Fetch: 54.54s.  Build: 2m 16.88s.  Total: 3m 11.42s.
[+] /gpfs/bbp.cscs.ch/ssd/gitlab_map_jobs/bbpcihpcproj12/P163887/software/install_gcc-12.2.0-skylake/nmodl-develop-zeh2ip
$ set +o pipefail
$ chmod -R g+rX "${SPACK_BUILD}"
$ if [[ ${install_failed} == 1 ]]; then exit 1; fi
$ SPACK_INSTALLED_HASH=$(spack ${SPACK_EXTRA_FLAGS} find --format "{hash}" /$(sed -ne '${s/.*-//;p}' log))
$ echo "Determined the installed hash to be ${SPACK_INSTALLED_HASH}"
Determined the installed hash to be zeh2ipk4tt36kewayr3sixulngvqmrxw
$ SPACK_STAGE_DIR=${SPACK_BUILD}/spack-stage-${SPACK_PACKAGE}-develop-${SPACK_INSTALLED_HASH}
$ SPACK_BUILD_DIR=${SPACK_STAGE_DIR}/spack-build-${SPACK_INSTALLED_HASH:0:7}
$ SPACK_SOURCE_DIR=${SPACK_STAGE_DIR}/spack-src
$ if [ ${SPACK_USE_CCACHE+x} ]; then
$ ccache --cleanup
$ ccache --show-stats --verbose
Summary:
  Cache directory:    /nvme/bbpcihpcproj12/1854014/ccache
  Primary config:     /nvme/bbpcihpcproj12/1854014/ccache/ccache.conf
  Secondary config:   /gpfs/bbp.cscs.ch/ssd/apps/bsd/2023-02-23/stage_externals/install_gcc-12.2.0-skylake/ccache-4.6.1-q2jyor/etc/ccache.conf
  Stats updated:      Fri Oct 20 23:45:08 2023
  Hits:                129 /  131 (98.47 %)
    Direct:             27 /  131 (20.61 %)
    Preprocessed:      102 /  104 (98.08 %)
  Misses:                2
    Direct:            104
    Preprocessed:        2
  Uncacheable:          25
Primary storage:
  Hits:                156 /  262 (59.54 %)
  Misses:              106
  Cache size (GB):    0.45 / 0.51 (87.16 %)
  Files:              1362
Uncacheable:
  Called for linking:   24
  No input file:         1
$ tar -C "${CCACHE_DIR}" -cf "${CI_PROJECT_DIR}/ccache.tar" .
$ fi
$ touch ${SPACK_STAGE_DIR}/spack-configure-args.txt
$ cp ${SPACK_STAGE_DIR}/spack-{build-env,build-out,configure-args}.txt ${CI_PROJECT_DIR}/
$ echo "SPACK_BUILD_DIR=${SPACK_BUILD_DIR}" > ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_FULL_SPEC=${SPACK_FULL_SPEC}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_SOURCE_DIR=${SPACK_SOURCE_DIR}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ SPACK_PACKAGE_SLUGIFY=$(echo -n ${SPACK_PACKAGE} | tr -c '[:alnum:]' '_' | tr '[:lower:]' '[:upper:]')
$ echo "${SPACK_PACKAGE_SLUGIFY}_INSTALLED_HASH=${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ echo "SPACK_PACKAGE_DEPENDENCY_ON_PREVIOUS_JOB=^/${SPACK_INSTALLED_HASH}" >> ${CI_PROJECT_DIR}/spack_build_info.env
$ num_failures=$(module load unstable python-dev; python -c "from lxml import etree; xml = etree.parse('${CI_PROJECT_DIR}/install.xml'); print(sum(1 for _ in xml.getroot().iter('failure')) + sum(1 for _ in xml.getroot().iter('error')))")
Autoloading python/3.10.8
Autoloading intel-oneapi-mkl/2021.4.0
Autoloading hpe-mpi/2.25.hmpt
$ if [[ ${num_failures} > 0 ]]; then exit ${num_failures}; fi
section_end:1697838310:step_script
section_start:1697838310:archive_cache
Saving cache for successful job
Using git from spack modules
Creating cache build:nmodl-1-non_protected...
Runtime platform                                    arch=amd64 os=linux pid=218889 revision=58ba2b95 version=14.2.0
ccache.tar: found 1 matching files and directories 
Uploading cache.zip to https://bbpobjectstorage.epfl.ch/gitlab-runners-cache/project/2160/build%3Anmodl-1-non_protected 
Created cache
section_end:1697838330:archive_cache
section_start:1697838330:upload_artifacts_on_success
Uploading artifacts for successful job
Using git from spack modules
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=219002 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
initial_environment.env: found 1 matching files and directories 
spack-build-env.txt: found 1 matching files and directories 
spack-build-out.txt: found 1 matching files and directories 
spack-configure-args.txt: found 1 matching files and directories 
Uploading artifacts as "archive" to coordinator... ok  id=980023 responseStatus=201 Created token=64_Zyw-M
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=219042 revision=58ba2b95 version=14.2.0
install.xml: found 1 matching files and directories 
Uploading artifacts as "junit" to coordinator... ok  id=980023 responseStatus=201 Created token=64_Zyw-M
Uploading artifacts...
Runtime platform                                    arch=amd64 os=linux pid=219080 revision=58ba2b95 version=14.2.0
spack_build_info.env: found 1 matching files and directories 
spack_clone_variables.env: found 1 matching files and directories 
Uploading artifacts as "dotenv" to coordinator... ok  id=980023 responseStatus=201 Created token=64_Zyw-M
section_end:1697838332:upload_artifacts_on_success
section_start:1697838332:cleanup_file_variables
Cleaning up project directory and file based variables
Using git from spack modules
section_end:1697838333:cleanup_file_variables
Job succeeded

GitLab logs for neuronsimulator-nrn#2468

!

mac-m1-cmake-build-cmake-on-off-off-address.txt

Running with gitlab-runner 15.4.0 (43b2dc3d)
  on macos-arm64 vGzz-bdp
section_start:1697837900:resolve_secrets
Resolving secrets
section_end:1697837900:resolve_secrets
section_start:1697837900:prepare_executor
Preparing the "shell" executor
Using Shell executor...
section_end:1697837900:prepare_executor
section_start:1697837900:prepare_script
Preparing environment
Running on bbpmacglr01.bbp.epfl.ch...
section_end:1697837900:prepare_script
section_start:1697837900:get_sources
Getting source from Git repository
Fetching changes with git depth set to 20...
Initialized empty Git repository in /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/.git/
Created fresh repository.
Checking out 0e83c98d as plot_species_fix...
Skipping Git submodules setup
section_end:1697837902:get_sources
section_start:1697837902:restore_cache
Restoring cache
Checking cache for mac_m1_cmake_build: [cmake, ON, OFF, OFF, address]-plot_species_fix-1-non_protected...
Runtime platform                                    arch=arm64 os=darwin pid=52920 revision=43b2dc3d version=15.4.0
No URL provided, cache will not be downloaded from shared cache server. Instead a local version of cache will be extracted. 
Successfully extracted cache
section_end:1697837913:restore_cache
section_start:1697837913:step_script
Executing "step_script" stage of the job script
$ cat > resolve_shim.py << END_SCRIPT # collapsed multi-line command
$ real_python=$(python3 resolve_shim.py)
$ echo "python3=$(command -v python3) is really ${real_python}"
python3=/opt/homebrew/bin/python3 is really /opt/homebrew/Cellar/python@3.10/3.10.8/Frameworks/Python.framework/Versions/3.10/Resources/Python.app/Contents/MacOS/Python
$ PYTHONEXECUTABLE=${real_python} ${real_python} -mvenv venv
$ venv/bin/pip install --upgrade pip -r nrn_requirements.txt
Requirement already satisfied: pip in ./venv/lib/python3.10/site-packages (22.2.2)
Collecting pip
  Using cached pip-23.3-py3-none-any.whl (2.1 MB)
Collecting wheel
  Using cached wheel-0.41.2-py3-none-any.whl (64 kB)
Requirement already satisfied: setuptools in ./venv/lib/python3.10/site-packages (from -r nrn_requirements.txt (line 2)) (65.4.1)
Collecting setuptools
  Using cached setuptools-68.2.2-py3-none-any.whl (807 kB)
Collecting setuptools_scm
  Using cached setuptools_scm-8.0.4-py3-none-any.whl (42 kB)
Collecting scikit-build
  Using cached scikit_build-0.17.6-py3-none-any.whl (84 kB)
Collecting matplotlib
  Using cached matplotlib-3.8.0-cp310-cp310-macosx_11_0_arm64.whl (7.5 MB)
Collecting bokeh<3
  Using cached bokeh-2.4.3-py3-none-any.whl (18.5 MB)
Collecting ipython
  Using cached ipython-8.16.1-py3-none-any.whl (806 kB)
Collecting cython<3
  Using cached Cython-0.29.36-py2.py3-none-any.whl (988 kB)
Collecting packaging
  Using cached packaging-23.2-py3-none-any.whl (53 kB)
Collecting pytest
  Using cached pytest-7.4.2-py3-none-any.whl (324 kB)
Collecting pytest-cov
  Using cached pytest_cov-4.1.0-py3-none-any.whl (21 kB)
Collecting mpi4py
  Using cached mpi4py-3.1.5-cp310-cp310-macosx_12_0_arm64.whl
Collecting numpy
  Using cached numpy-1.26.1-cp310-cp310-macosx_11_0_arm64.whl (14.0 MB)
Collecting find_libpython
  Using cached find_libpython-0.3.1-py3-none-any.whl (8.4 kB)
Collecting tomli>=1
  Using cached tomli-2.0.1-py3-none-any.whl (12 kB)
Collecting typing-extensions
  Using cached typing_extensions-4.8.0-py3-none-any.whl (31 kB)
Collecting distro
  Using cached distro-1.8.0-py3-none-any.whl (20 kB)
Collecting python-dateutil>=2.7
  Using cached python_dateutil-2.8.2-py2.py3-none-any.whl (247 kB)
Collecting kiwisolver>=1.0.1
  Using cached kiwisolver-1.4.5-cp310-cp310-macosx_11_0_arm64.whl (66 kB)
Collecting cycler>=0.10
  Using cached cycler-0.12.1-py3-none-any.whl (8.3 kB)
Collecting fonttools>=4.22.0
  Using cached fonttools-4.43.1-cp310-cp310-macosx_10_9_universal2.whl (2.7 MB)
Collecting contourpy>=1.0.1
  Using cached contourpy-1.1.1-cp310-cp310-macosx_11_0_arm64.whl (232 kB)
Collecting pyparsing>=2.3.1
  Using cached pyparsing-3.1.1-py3-none-any.whl (103 kB)
Collecting pillow>=6.2.0
  Using cached Pillow-10.1.0-cp310-cp310-macosx_11_0_arm64.whl (3.3 MB)
Collecting Jinja2>=2.9
  Using cached Jinja2-3.1.2-py3-none-any.whl (133 kB)
Collecting tornado>=5.1
  Using cached tornado-6.3.3-cp38-abi3-macosx_10_9_universal2.whl (425 kB)
Collecting PyYAML>=3.10
  Using cached PyYAML-6.0.1-cp310-cp310-macosx_11_0_arm64.whl (169 kB)
Collecting jedi>=0.16
  Using cached jedi-0.19.1-py2.py3-none-any.whl (1.6 MB)
Collecting matplotlib-inline
  Using cached matplotlib_inline-0.1.6-py3-none-any.whl (9.4 kB)
Collecting pygments>=2.4.0
  Using cached Pygments-2.16.1-py3-none-any.whl (1.2 MB)
Collecting prompt-toolkit!=3.0.37,<3.1.0,>=3.0.30
  Using cached prompt_toolkit-3.0.39-py3-none-any.whl (385 kB)
Collecting stack-data
  Using cached stack_data-0.6.3-py3-none-any.whl (24 kB)
Collecting pexpect>4.3
  Using cached pexpect-4.8.0-py2.py3-none-any.whl (59 kB)
Collecting appnope
  Using cached appnope-0.1.3-py2.py3-none-any.whl (4.4 kB)
Collecting pickleshare
  Using cached pickleshare-0.7.5-py2.py3-none-any.whl (6.9 kB)
Collecting traitlets>=5
  Using cached traitlets-5.11.2-py3-none-any.whl (83 kB)
Collecting backcall
  Using cached backcall-0.2.0-py2.py3-none-any.whl (11 kB)
Collecting exceptiongroup
  Using cached exceptiongroup-1.1.3-py3-none-any.whl (14 kB)
Collecting decorator
  Using cached decorator-5.1.1-py3-none-any.whl (9.1 kB)
Collecting iniconfig
  Using cached iniconfig-2.0.0-py3-none-any.whl (5.9 kB)
Collecting pluggy<2.0,>=0.12
  Using cached pluggy-1.3.0-py3-none-any.whl (18 kB)
Collecting coverage[toml]>=5.2.1
  Using cached coverage-7.3.2-cp310-cp310-macosx_11_0_arm64.whl (200 kB)
Collecting parso<0.9.0,>=0.8.3
  Using cached parso-0.8.3-py2.py3-none-any.whl (100 kB)
Collecting MarkupSafe>=2.0
  Using cached MarkupSafe-2.1.3-cp310-cp310-macosx_10_9_universal2.whl (17 kB)
Collecting ptyprocess>=0.5
  Using cached ptyprocess-0.7.0-py2.py3-none-any.whl (13 kB)
Collecting wcwidth
  Using cached wcwidth-0.2.8-py2.py3-none-any.whl (31 kB)
Collecting six>=1.5
  Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Collecting executing>=1.2.0
  Using cached executing-2.0.0-py2.py3-none-any.whl (24 kB)
Collecting pure-eval
  Using cached pure_eval-0.2.2-py3-none-any.whl (11 kB)
Collecting asttokens>=2.1.0
  Using cached asttokens-2.4.0-py2.py3-none-any.whl (27 kB)
Installing collected packages: wcwidth, pure-eval, ptyprocess, pickleshare, find_libpython, executing, backcall, appnope, wheel, typing-extensions, traitlets, tornado, tomli, six, setuptools, PyYAML, pyparsing, pygments, prompt-toolkit, pluggy, pip, pillow, pexpect, parso, packaging, numpy, mpi4py, MarkupSafe, kiwisolver, iniconfig, fonttools, exceptiongroup, distro, decorator, cython, cycler, coverage, setuptools_scm, scikit-build, python-dateutil, pytest, matplotlib-inline, Jinja2, jedi, contourpy, asttokens, stack-data, pytest-cov, matplotlib, bokeh, ipython
  Attempting uninstall: setuptools
    Found existing installation: setuptools 65.4.1
    Uninstalling setuptools-65.4.1:
      Successfully uninstalled setuptools-65.4.1
  Attempting uninstall: pip
    Found existing installation: pip 22.2.2
    Uninstalling pip-22.2.2:
      Successfully uninstalled pip-22.2.2
Successfully installed Jinja2-3.1.2 MarkupSafe-2.1.3 PyYAML-6.0.1 appnope-0.1.3 asttokens-2.4.0 backcall-0.2.0 bokeh-2.4.3 contourpy-1.1.1 coverage-7.3.2 cycler-0.12.1 cython-0.29.36 decorator-5.1.1 distro-1.8.0 exceptiongroup-1.1.3 executing-2.0.0 find_libpython-0.3.1 fonttools-4.43.1 iniconfig-2.0.0 ipython-8.16.1 jedi-0.19.1 kiwisolver-1.4.5 matplotlib-3.8.0 matplotlib-inline-0.1.6 mpi4py-3.1.5 numpy-1.26.1 packaging-23.2 parso-0.8.3 pexpect-4.8.0 pickleshare-0.7.5 pillow-10.1.0 pip-23.3 pluggy-1.3.0 prompt-toolkit-3.0.39 ptyprocess-0.7.0 pure-eval-0.2.2 pygments-2.16.1 pyparsing-3.1.1 pytest-7.4.2 pytest-cov-4.1.0 python-dateutil-2.8.2 scikit-build-0.17.6 setuptools-68.2.2 setuptools_scm-8.0.4 six-1.16.0 stack-data-0.6.3 tomli-2.0.1 tornado-6.3.3 traitlets-5.11.2 typing-extensions-4.8.0 wcwidth-0.2.8 wheel-0.41.2
$ git submodule update --init --recursive --force --depth 1 -- external/nmodl
Submodule 'external/nmodl' (https://github.com/BlueBrain/nmodl) registered for path 'external/nmodl'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl'...
From https://github.com/BlueBrain/nmodl
 * branch            f180a2d45aabc0d8630b2a7fc8d90c1d8fd07e26 -> FETCH_HEAD
Submodule path 'external/nmodl': checked out 'f180a2d45aabc0d8630b2a7fc8d90c1d8fd07e26'
Submodule 'cmake/hpc-coding-conventions' (https://github.com/BlueBrain/hpc-coding-conventions.git) registered for path 'external/nmodl/cmake/hpc-coding-conventions'
Submodule 'ext/catch2' (https://github.com/catchorg/Catch2.git) registered for path 'external/nmodl/ext/catch2'
Submodule 'ext/cli11' (https://github.com/CLIUtils/CLI11.git) registered for path 'external/nmodl/ext/cli11'
Submodule 'ext/eigen' (https://gitlab.com/libeigen/eigen.git) registered for path 'external/nmodl/ext/eigen'
Submodule 'ext/fmt' (https://github.com/fmtlib/fmt.git) registered for path 'external/nmodl/ext/fmt'
Submodule 'ext/json' (https://github.com/nlohmann/json.git) registered for path 'external/nmodl/ext/json'
Submodule 'ext/pybind11' (https://github.com/pybind/pybind11.git) registered for path 'external/nmodl/ext/pybind11'
Submodule 'ext/spdlog' (https://github.com/gabime/spdlog) registered for path 'external/nmodl/ext/spdlog'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/cmake/hpc-coding-conventions'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/catch2'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/cli11'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/eigen'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/fmt'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/json'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/pybind11'...
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/spdlog'...
From https://github.com/BlueBrain/hpc-coding-conventions
 * branch            f8f8d69a66c23978d1c9c5dce62de79466f26e5d -> FETCH_HEAD
Submodule path 'external/nmodl/cmake/hpc-coding-conventions': checked out 'f8f8d69a66c23978d1c9c5dce62de79466f26e5d'
From https://github.com/catchorg/Catch2
 * branch            3f0283de7a9c43200033da996ff9093be3ac84dc -> FETCH_HEAD
Submodule path 'external/nmodl/ext/catch2': checked out '3f0283de7a9c43200033da996ff9093be3ac84dc'
From https://github.com/CLIUtils/CLI11
 * branch            b9be5b9444772324459989177108a6a65b8b2769 -> FETCH_HEAD
Submodule path 'external/nmodl/ext/cli11': checked out 'b9be5b9444772324459989177108a6a65b8b2769'
From https://gitlab.com/libeigen/eigen
 * branch            3147391d946bb4b6c68edd901f2add6ac1f31f8c -> FETCH_HEAD
Submodule path 'external/nmodl/ext/eigen': checked out '3147391d946bb4b6c68edd901f2add6ac1f31f8c'
From https://github.com/fmtlib/fmt
 * branch            a33701196adfad74917046096bf5a2aa0ab0bb50 -> FETCH_HEAD
Submodule path 'external/nmodl/ext/fmt': checked out 'a33701196adfad74917046096bf5a2aa0ab0bb50'
From https://github.com/nlohmann/json
 * branch            4f8fba14066156b73f1189a2b8bd568bde5284c5 -> FETCH_HEAD
Submodule path 'external/nmodl/ext/json': checked out '4f8fba14066156b73f1189a2b8bd568bde5284c5'
From https://github.com/pybind/pybind11
 * branch            914c06fb252b6cc3727d0eedab6736e88a3fcb01 -> FETCH_HEAD
Submodule path 'external/nmodl/ext/pybind11': checked out '914c06fb252b6cc3727d0eedab6736e88a3fcb01'
From https://github.com/gabime/spdlog
 * branch            76fb40d95455f249bd70824ecfcae7a8f0930fa3 -> FETCH_HEAD
Submodule path 'external/nmodl/ext/spdlog': checked out '76fb40d95455f249bd70824ecfcae7a8f0930fa3'
$ venv/bin/pip install --upgrade -r external/nmodl/requirements.txt
Requirement already satisfied: Jinja2>=2.9.3 in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 1)) (3.1.2)
Requirement already satisfied: PyYAML>=3.13 in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 2)) (6.0.1)
Requirement already satisfied: pytest in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 3)) (7.4.2)
Requirement already satisfied: pytest-cov in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 4)) (4.1.0)
Collecting sympy (from -r external/nmodl/requirements.txt (line 5))
  Using cached sympy-1.12-py3-none-any.whl (5.7 MB)
Requirement already satisfied: numpy in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 6)) (1.26.1)
Requirement already satisfied: find_libpython in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 7)) (0.3.1)
Requirement already satisfied: scikit-build in ./venv/lib/python3.10/site-packages (from -r external/nmodl/requirements.txt (line 8)) (0.17.6)
Requirement already satisfied: MarkupSafe>=2.0 in ./venv/lib/python3.10/site-packages (from Jinja2>=2.9.3->-r external/nmodl/requirements.txt (line 1)) (2.1.3)
Requirement already satisfied: iniconfig in ./venv/lib/python3.10/site-packages (from pytest->-r external/nmodl/requirements.txt (line 3)) (2.0.0)
Requirement already satisfied: packaging in ./venv/lib/python3.10/site-packages (from pytest->-r external/nmodl/requirements.txt (line 3)) (23.2)
Requirement already satisfied: pluggy<2.0,>=0.12 in ./venv/lib/python3.10/site-packages (from pytest->-r external/nmodl/requirements.txt (line 3)) (1.3.0)
Requirement already satisfied: exceptiongroup>=1.0.0rc8 in ./venv/lib/python3.10/site-packages (from pytest->-r external/nmodl/requirements.txt (line 3)) (1.1.3)
Requirement already satisfied: tomli>=1.0.0 in ./venv/lib/python3.10/site-packages (from pytest->-r external/nmodl/requirements.txt (line 3)) (2.0.1)
Requirement already satisfied: coverage>=5.2.1 in ./venv/lib/python3.10/site-packages (from coverage[toml]>=5.2.1->pytest-cov->-r external/nmodl/requirements.txt (line 4)) (7.3.2)
Collecting mpmath>=0.19 (from sympy->-r external/nmodl/requirements.txt (line 5))
  Using cached mpmath-1.3.0-py3-none-any.whl (536 kB)
Requirement already satisfied: distro in ./venv/lib/python3.10/site-packages (from scikit-build->-r external/nmodl/requirements.txt (line 8)) (1.8.0)
Requirement already satisfied: setuptools>=42.0.0 in ./venv/lib/python3.10/site-packages (from scikit-build->-r external/nmodl/requirements.txt (line 8)) (68.2.2)
Requirement already satisfied: wheel>=0.32.0 in ./venv/lib/python3.10/site-packages (from scikit-build->-r external/nmodl/requirements.txt (line 8)) (0.41.2)
Installing collected packages: mpmath, sympy
Successfully installed mpmath-1.3.0 sympy-1.12
WARNING: There was an error checking the latest version of pip.
$ source ./venv/bin/activate
$ export PYTHON=${PWD}/venv/bin/python
$ ${PYTHON} --version
Python 3.10.8
$ ${PYTHON} -c "import os,matplotlib; f = open(os.path.join(os.path.dirname(matplotlib.__file__), \"mpl-data/matplotlibrc\"),\"a\"); f.write(\"backend: TkAgg\");f.close();"
$ export CXX=${CXX:-g++}
$ export CC=${CC:-gcc}
$ brew install flex bison
Warning: flex 2.6.4_2 is already installed and up-to-date.
To reinstall 2.6.4_2, run:
  brew reinstall flex
Warning: bison 3.8.2 is already installed and up-to-date.
To reinstall 3.8.2, run:
  brew reinstall bison
$ export PATH="/opt/homebrew/opt/flex/bin:/opt/homebrew/opt/bison/bin:$PATH"
$ export INSTALL_DIR=$(pwd)/install
$ echo $LANG

$ echo $LC_ALL

$ export PYTHONPATH=$(${PYTHON} -c "import site; print(\":\".join(site.getsitepackages()))")
$ ${PYTHON} -c 'import os,sys; os.set_blocking(sys.stdout.fileno(), True)'
$ cmake_args=(-G Ninja)
$ if [[ -n "${sanitizer}" ]]; then
$ cmake_args+=(-DCMAKE_BUILD_TYPE=Custom -DCMAKE_C_FLAGS="-O1 -g" -DCMAKE_CXX_FLAGS="-O1 -g" -DNRN_SANITIZERS=$(echo ${sanitizer} | sed -e 's/-/,/g'))
$ fi
$ cmake_args+=(-DCMAKE_C_COMPILER="${CC}" -DCMAKE_C_COMPILER_LAUNCHER=ccache -DCMAKE_CXX_COMPILER="${CXX}" -DCMAKE_CXX_COMPILER_LAUNCHER=ccache -DCMAKE_INSTALL_PREFIX="${INSTALL_DIR}" -DNRN_ENABLE_TESTS=ON -DNRN_ENABLE_PERFORMANCE_TESTS=OFF -DNRN_ENABLE_CORENEURON=${cmake_coreneuron} -DNRN_ENABLE_INTERVIEWS=${cmake_interviews} -DNRN_ENABLE_RX3D=${cmake_rx3d})
$ cmake_args+=(-DPYTHON_EXECUTABLE="${PYTHON}")
$ mkdir build && cd build
$ echo "Building with ${cmake_args[@]}"
Building with -G Ninja -DCMAKE_BUILD_TYPE=Custom -DCMAKE_C_FLAGS=-O1 -g -DCMAKE_CXX_FLAGS=-O1 -g -DNRN_SANITIZERS=address -DCMAKE_C_COMPILER=gcc -DCMAKE_C_COMPILER_LAUNCHER=ccache -DCMAKE_CXX_COMPILER=g++ -DCMAKE_CXX_COMPILER_LAUNCHER=ccache -DCMAKE_INSTALL_PREFIX=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install -DNRN_ENABLE_TESTS=ON -DNRN_ENABLE_PERFORMANCE_TESTS=OFF -DNRN_ENABLE_CORENEURON=ON -DNRN_ENABLE_INTERVIEWS=OFF -DNRN_ENABLE_RX3D=OFF -DPYTHON_EXECUTABLE=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/bin/python
$ cmake .. "${cmake_args[@]}"
-- The C compiler identification is AppleClang 14.0.0.14000029
-- The CXX compiler identification is AppleClang 14.0.0.14000029
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- git describe failed (stdout: '', stderr: 'fatal: No names found, cannot describe anything.', code: 128), skipping the version check
-- Sub-module : missing external/coding-conventions : running git submodule update --init
Submodule 'external/coding-conventions' (https://github.com/BlueBrain/hpc-coding-conventions.git) registered for path 'external/coding-conventions'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/coding-conventions'...
Submodule path 'external/coding-conventions': checked out '80a2c9013463b89b5c426e18403e9a2f87c59a00'
-- Fetching git submodule external/Random123: running git submodule update --init;--recursive;--depth;1 -- external/Random123
Submodule 'external/Random123' (https://github.com/BlueBrain/Random123.git) registered for path 'external/Random123'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/Random123'...
From https://github.com/BlueBrain/Random123
 * branch            b5cb15614e8f3eb0ff316bdc50c300ddd32fa3c1 -> FETCH_HEAD
Submodule path 'external/Random123': checked out 'b5cb15614e8f3eb0ff316bdc50c300ddd32fa3c1'
-- 3rd party project: using Random123 from "external/Random123"
-- Fetching git submodule external/eigen: running git submodule update --init;--recursive;--depth;1 -- external/eigen
Submodule 'external/eigen' (https://gitlab.com/libeigen/eigen.git) registered for path 'external/eigen'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/eigen'...
From https://gitlab.com/libeigen/eigen
 * branch            328b5f90858f93344ebc1484df8cadfd2a5da6dd -> FETCH_HEAD
Submodule path 'external/eigen': checked out '328b5f90858f93344ebc1484df8cadfd2a5da6dd'
-- 3rd party project: using eigen from "external/eigen"
-- Enabling sanitizers: address
-- Sanitizer runtime library: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/14.0.0/lib/darwin/libclang_rt.asan_osx_dynamic.dylib
-- Checking if /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/bin/python is a working python
-- Found BISON: /opt/homebrew/opt/bison/bin/bison (found version "3.8.2") 
-- Found FLEX: /opt/homebrew/opt/flex/bin/flex (found suitable version "2.6.4", minimum required is "2.6") 
-- Found Readline: /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk/usr/include  
-- Found MPI_C: /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib (found version "3.1") 
-- Found MPI_CXX: /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib (found version "3.1") 
-- Found MPI: TRUE (found version "3.1")  
-- Detected OpenMPI 4.1.4
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Fetching git submodule external/CLI11: running git submodule update --init;--recursive;--depth;1 -- external/CLI11
Submodule 'external/CLI11' (https://github.com/CLIUtils/CLI11.git) registered for path 'external/CLI11'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/CLI11'...
From https://github.com/CLIUtils/CLI11
 * branch            291c58789c031208f08f4f261a858b5b7083e8e2 -> FETCH_HEAD
Submodule path 'external/CLI11': checked out '291c58789c031208f08f4f261a858b5b7083e8e2'
-- 3rd party project: using CLI11 from "external/CLI11"
-- Building CoreNEURON
-- Found Git: /usr/bin/git (found version "2.37.0 (Apple Git-136)") 
-- Found Perl: /usr/bin/perl (found version "5.30.3") 
-- Could NOT find nmodl (missing: nmodl_BINARY nmodl_INCLUDE nmodl_PYTHONPATH) 
-- Sub-project : using nmodl from from /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl
-- CHECKING FOR FLEX/BISON
-- Found BISON: /opt/homebrew/opt/bison/bin/bison (found suitable version "3.8.2", minimum required is "3.0") 
--  Adding Flex include path as : /opt/homebrew/opt/flex/include/
-- NMODL_TEST_FORMATTING: OFF
-- NMODL_GIT_HOOKS: OFF
-- NMODL_GIT_COMMIT_HOOKS: 
-- NMODL_GIT_PUSH_HOOKS: courtesy-msg
-- NMODL_STATIC_ANALYSIS: OFF
-- NMODL_TEST_STATIC_ANALYSIS: OFF
-- 3rd party project: using eigen from "ext/eigen"
-- 3rd party project: using fmt from "ext/fmt"
-- Module support is disabled.
-- Version: 9.1.0
-- Build type: Custom
-- CXX_STANDARD: 17
-- Required features: cxx_variadic_templates
-- 3rd party project: using json from "ext/json"
-- Using the single-header code from /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/nmodl/ext/json/single_include/
-- 3rd party project: using pybind11 from "ext/pybind11"
-- pybind11 v2.9.2 
-- Found PythonInterp: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/bin/python (found version "3.10.8") 
-- Found PythonLibs: /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib
-- 3rd party project: using spdlog from "ext/spdlog"
-- Build spdlog: 1.10.0
-- Build type: Custom
-- CHECKING FOR PYTHON
-- Found PythonInterp: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/bin/python (found suitable version "3.10.8", minimum required is "3.8") 
-- 
-- Configured NMODL 0.0 (f180a2d 2023-09-21 17:15:39 +0200)
-- 
-- You can now build NMODL using:
--   cmake --build . --parallel 8 [--target TARGET]
-- You might want to adjust the number of parallel build jobs for your system.
-- Some non-default targets you might want to build:
-- --------------------+--------------------------------------------------------
--  Target             |   Description
-- --------------------+--------------------------------------------------------
-- test                | Run unit tests
-- install             | Will install NMODL to: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install
-- --------------------+--------------------------------------------------------
--  Build option       | Status
-- --------------------+--------------------------------------------------------
-- CXX COMPILER        | /usr/bin/g++
-- COMPILE FLAGS       | -O1 -g 
-- Build Type          | Custom
-- Legacy Units        | OFF
-- Python Bindings     | ON
-- Flex                | /opt/homebrew/opt/flex/bin/flex
-- Bison               | /opt/homebrew/opt/bison/bin/bison
-- Python              | /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/bin/python
--   Linked against    | TRUE
-- --------------------+--------------------------------------------------------
--  See documentation : https://github.com/BlueBrain/nmodl/
-- --------------------+--------------------------------------------------------
-- 
-- 
-- CoreNEURON is enabled with following build configuration:
-- --------------------+--------------------------------------------------------
--  Build option       | Status
-- --------------------+--------------------------------------------------------
-- CXX COMPILER        | /usr/bin/g++
-- COMPILE FLAGS       | -O1 -g -std=c++17 -DCORENEURON_BUILD -DEIGEN_DONT_PARALLELIZE -DNRNMPI=1 -DLAYOUT=0 -DDISABLE_HOC_EXP -DENABLE_SPLAYTREE_QUEUING -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope
-- Build Type          | SHARED
-- MPI                 | ON
--   DYNAMIC           | OFF
--   INC               | /opt/homebrew/Cellar/open-mpi/4.1.4_2/include
-- OpenMP              | ON
-- NMODL PATH          | /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/bin/nmodl
-- NMODL FLAGS         | 
-- GPU Support         | OFF
-- Auto Timeout        | ON
-- Wrap exp()          | OFF
-- SplayTree Queue     | ON
-- NetReceive Buffer   | ON
-- Caliper             | OFF
-- Likwid              | OFF
-- Unit Tests          | ON
-- Reporting           | OFF
-- --------------------+--------------------------------------------------------
-- 
Extracting link flags from target 'nrngnu', beware that this can be fragile. Got: 
Extracting link flags from target 'sparse13', beware that this can be fragile. Got: 
Extracting link flags from target 'Threads::Threads', beware that this can be fragile. Got: 
Generating link flags from path /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib Got: /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib
Generating link flags from path /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib Got: /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
-- Sub-module : missing /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/catch2 : running git submodule update --init
Submodule 'external/catch2' (https://github.com/catchorg/Catch2.git) registered for path 'external/catch2'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/external/catch2'...
Submodule path 'external/catch2': checked out 'c4e3767e265808590986d5db6ca1b5532a7f3d13'
-- Found Python module 'pytest' with version(s): 7.4.2
-- Found Python module 'pytest_cov' with version(s): 4.1.0
-- Fetching git submodule test/rxd/testdata: running git submodule update --init;--recursive;--depth;1 -- test/rxd/testdata
Submodule 'test/rxd/testdata' (https://github.com/neuronsimulator/rxdtestdata) registered for path 'test/rxd/testdata'
Cloning into '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/test/rxd/testdata'...
From https://github.com/neuronsimulator/rxdtestdata
 * branch            30c76babbbc2cff005fd3f6f649c8b81da41ee58 -> FETCH_HEAD
Submodule path 'test/rxd/testdata': checked out '30c76babbbc2cff005fd3f6f649c8b81da41ee58'
-- 3rd party project: using rxd/testdata from "test/rxd/testdata"
-- Found Python module 'mpi4py' with version(s): 3.1.5
-- Disabling coreneuron_modtests::fornetcon_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::direct_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::direct_hoc_gpu: gpu not enabled
-- Disabling coreneuron_modtests::spikes_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::spikes_file_mode_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::fast_imem_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::datareturn_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_units_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_netmove_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_pointer_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_watchrange_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_psolve_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_ba_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_natrans_py_gpu: gpu not enabled
-- Found Python module 'mpi4py' with version(s): 3.1.5
-- Disabling coreneuron_modtests::spikes_mpi_file_mode_py_gpu: gpu not enabled
-- Disabling coreneuron_modtests::test_subworlds_py_gpu: gpu not enabled
-- Disabling nmodl_tests_coreneuron::test_table_coreneuron_gpu: gpu not enabled
-- Disabling nmodl_tests_coreneuron::test_disc_coreneuron_gpu: gpu not enabled
-- Disabling nmodl_tests_coreneuron::test_function_table_coreneuron_gpu: gpu not enabled
-- Disabling nmodl_tests_coreneuron::test_kinetic_coreneuron_gpu: gpu not enabled
-- Disabling reduced_dentate::coreneuron_gpu: gpu not enabled
-- Disabling external_ringtest::coreneuron_gpu_mpi_offline_saverestore: gpu not enabled
-- Disabling external_ringtest::coreneuron_gpu_mpi: gpu not enabled
-- Disabling external_ringtest::coreneuron_gpu_mpi_python: gpu not enabled
-- Disabling external_ringtest::coreneuron_gpu_mpi_offline: gpu not enabled
-- Disabling external_ringtest::coreneuron_gpu_mpi_threads: gpu not enabled
-- Disabling external_ringtest::coreneuron_gpu_mpi_threads_python: gpu not enabled
-- Disabling testcorenrn_bbcore::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_bbcore::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_bbcore::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_conc::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_conc::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_conc::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_deriv::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_deriv::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_deriv::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_gf::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_gf::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_gf::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_kin::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_kin::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_kin::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_patstim::coreneuron_gpu_offline_saverestore: gpu not enabled
-- Disabling testcorenrn_patstim::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_vecplay::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_vecplay::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_vecplay::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_vecevent::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_vecevent::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_vecevent::coreneuron_gpu_offline: gpu not enabled
-- Disabling testcorenrn_watch::coreneuron_gpu_online: gpu not enabled
-- Disabling testcorenrn_watch::coreneuron_gpu_online_psolve_alternate: gpu not enabled
-- Disabling testcorenrn_watch::coreneuron_gpu_offline: gpu not enabled
-- Could NOT find OpenSSL, try to set the path to OpenSSL root folder in the system variable OPENSSL_ROOT_DIR (missing: OPENSSL_CRYPTO_LIBRARY OPENSSL_INCLUDE_DIR) 
-- Skipping tqperf test as OpenSSL package not found
-- 
-- Configured NEURON 9.0.0
-- 
-- You can now build NEURON using:
--   cmake --build . --parallel 8 [--target TARGET]
-- You might want to adjust the number of parallel build jobs for your system.
-- Some non-default targets you might want to build:
-- --------------+--------------------------------------------------------------
--  Target       |   Description
-- --------------+--------------------------------------------------------------
-- install       | Will install NEURON to: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install
--               | Change the install location of NEURON using:
--               |   cmake <src_path> -DCMAKE_INSTALL_PREFIX=<install_path>
-- docs          | Build full docs. Calls targets: doxygen, notebooks, sphinx, notebooks-clean
-- uninstall     | Removes files installed by make install (todo)
-- --------------+--------------------------------------------------------------
--  Build option | Status
-- --------------+--------------------------------------------------------------
-- C COMPILER    | /usr/bin/gcc
-- CXX COMPILER  | /usr/bin/g++
-- BUILD_TYPE    | Custom (allowed: Custom;Debug;Release;RelWithDebInfo;Fast)
-- COMPILE FLAGS | -O1 -g -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope
-- Shared        | ON
-- MPI           | ON
--   DYNAMIC     | OFF
--   INC         | /opt/homebrew/Cellar/open-mpi/4.1.4_2/include
--   LIB         | /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib
-- Python        | ON
--   DYNAMIC     | OFF
--   MODULE      | ON
--  python3.10 (default)
--   EXE         | /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/bin/python
--   INC         | /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/include/python3.10
--   LIB         | /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib
-- Readline      | /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk/usr/lib/libreadline.tbd
-- Curses        | /Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk/usr/lib/libcurses.tbd;/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk/usr/lib/libform.tbd
-- RX3D          | OFF
-- Interviews    | OFF
-- CoreNEURON    | ON
--   PATH        | /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/coreneuron
--   LINK FLAGS  |  -lcorenrnmech  -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib
-- Tests         | ON
-- --------------+--------------------------------------------------------------
--  See documentation : https://www.neuron.yale.edu/neuron/
-- --------------+--------------------------------------------------------------
-- 
-- Configuring done
-- Generating done
-- Build files have been written to: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build
$ ccache -z
Statistics zeroed
$ ccache -vs 2>/dev/null
Cache directory:    /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/ccache
Config file:        /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/ccache/ccache.conf
System config file: /opt/homebrew/Cellar/ccache/4.7.2/etc/ccache.conf
Stats updated:      Fri Oct 20 23:39:40 2023
Local storage:
  Cache size (GB):  1.37 / 5.00 (27.43%)
  Files:            9876
  Hits:                0
  Misses:              0
  Reads:               0
  Writes:              0
$ cmake --build . --parallel
[0/2] Re-checking globbed directories...
[1/1771] Generating share/nrn/demo/cycle.hoc
[2/1771] Generating share/nrn/demo/demo.hoc
[3/1771] Generating share/nrn/demo/demo.ses
[4/1771] Generating share/nrn/demo/d3init.hoc
[5/1771] Generating share/nrn/demo/dend3.ses
[6/1771] Generating share/nrn/demo/dend3/syn3.hoc
[7/1771] Generating share/nrn/demo/dend3/dend3.nrn
[8/1771] Generating share/nrn/demo/dend3/control.hoc
[9/1771] Generating share/nrn/demo/dynchan.ses
[10/1771] Generating share/nrn/demo/dynclamp.hoc
[11/1771] Generating share/nrn/demo/hh.hoc
[12/1771] Generating share/nrn/demo/hh.ses
[13/1771] Generating share/nrn/demo/pyramid.nrn
[14/1771] Generating share/nrn/demo/nomodel.hoc
[15/1771] Generating share/nrn/demo/dynclamp.ses
[16/1771] Generating share/nrn/demo/pyramid.ses
[17/1771] Update hh.mod for CoreNEURON compatibility
[18/1771] Generating share/nrn/demo/reconst.hoc
[19/1771] Generating share/nrn/demo/release.hoc
[20/1771] Generating share/nrn/demo/release/capump.mod
[21/1771] Generating share/nrn/demo/release/cabpump.mod
[22/1771] Generating share/nrn/demo/release.ses
[23/1771] Generating share/nrn/demo/release/cachan1.mod
[24/1771] Generating share/nrn/demo/release/camchan.mod
[25/1771] Generating share/nrn/demo/release/nacaex.mod
[26/1771] Generating share/nrn/demo/release/invlfire.mod
[27/1771] Generating share/nrn/demo/release/khhchan.mod
[28/1771] Generating share/nrn/demo/release/nachan.mod
[29/1771] Generating share/nrn/demo/release/release.mod
[30/1771] Generating share/nrn/demo/singhhchan.hoc
[31/1771] Generating share/nrn/demo/singhh.ses
[32/1771] Generating share/nrn/demo/singhh.hoc
[33/1771] Generating share/nrn/demo/sync/cell.hoc
[34/1771] Generating share/nrn/demo/sync/demosync.hoc
[35/1771] Generating share/nrn/demo/sync/spkplot.hoc
[36/1771] Generating share/nrn/demo/sync/start.ses
[37/1771] Generating share/nrn/demo/sync/synchronize.hoc
[38/1771] Generating share/nrn/demo/testca.hoc
[39/1771] Generating share/nrn/demo/sync/init.hoc
[40/1771] Generating share/nrn/lib/auditscripts/gettarname
[41/1771] Generating share/nrn/lib/auditscripts/hocaudit.sh
[42/1771] Generating share/nrn/lib/auditscripts/notes
[43/1771] Generating share/nrn/lib/auditscripts/saveaudit
[44/1771] Generating share/nrn/lib/auditscripts/retrieve.sh
[45/1771] Generating share/nrn/lib/helpdict
[46/1771] Generating share/nrn/lib/cleanup
[47/1771] Generating share/nrn/lib/hoc/atoltool.hoc
[48/1771] Generating share/nrn/lib/hoc/attshape.hoc
[49/1771] Generating share/nrn/lib/hoc/binfo.hoc
[50/1771] Generating share/nrn/lib/hoc/celbild/celbild1.hoc
[51/1771] Generating share/nrn/lib/hoc/celbild/celmang.hoc
[52/1771] Generating share/nrn/lib/hoc/celbild.hoc
[53/1771] Generating share/nrn/lib/hoc/celbild/celgeom.hoc
[54/1771] Generating share/nrn/lib/hoc/celbild/celmemb.hoc
[55/1771] Generating share/nrn/lib/hoc/celbild/celset.hoc
[56/1771] Generating share/nrn/lib/hoc/celbild/celtopol.hoc
[57/1771] Generating share/nrn/lib/hoc/celbild/inhomofn.hoc
[58/1771] Generating share/nrn/lib/hoc/celbild/psubset.hoc
[59/1771] Generating share/nrn/lib/hoc/chanbild.hoc
[60/1771] Generating share/nrn/lib/hoc/chanbild/chanbild1.hoc
[61/1771] Generating share/nrn/lib/hoc/chanbild/const.hoc
[62/1771] Generating share/nrn/lib/hoc/chanbild/exp.hoc
[63/1771] Generating share/nrn/lib/hoc/chanbild/kschanbg.hoc
[64/1771] Generating share/nrn/lib/hoc/chanbild/gategui.hoc
[65/1771] Generating share/nrn/lib/hoc/chanbild/ksstate.hoc
[66/1771] Generating share/nrn/lib/hoc/chanbild/ksgate.hoc
[67/1771] Generating share/nrn/lib/hoc/chanbild/kstgui.hoc
[68/1771] Generating share/nrn/lib/hoc/chanbild/kstrans.hoc
[69/1771] Generating share/nrn/lib/hoc/chanbild/linoid.hoc
[70/1771] Generating share/nrn/lib/hoc/chanbild/sigmoid.hoc
[71/1771] Generating share/nrn/lib/hoc/chanbild/table.hoc
[72/1771] Generating share/nrn/lib/hoc/chanbild/properties.hoc
[73/1771] Generating share/nrn/lib/hoc/corenrn.hoc
[74/1771] Generating share/nrn/lib/hoc/electrod.hoc
[75/1771] Generating share/nrn/lib/hoc/family.hoc
[76/1771] Generating share/nrn/lib/hoc/gatherv.hoc
[77/1771] Generating share/nrn/lib/hoc/grapher.hoc
[78/1771] Generating share/nrn/lib/hoc/funfit.hoc
[79/1771] Generating share/nrn/lib/hoc/impedanc.hoc
[80/1771] Generating share/nrn/lib/hoc/impedanx.hoc
[81/1771] Generating share/nrn/lib/hoc/import3d/import3d_gui.hoc
[82/1771] Generating share/nrn/lib/hoc/import3d.hoc
[83/1771] Generating share/nrn/lib/hoc/import3d/import3d_sec.hoc
[84/1771] Generating share/nrn/lib/hoc/import3d/read_morphml.hoc
[85/1771] Generating share/nrn/lib/hoc/import3d/read_nlcda.hoc
[86/1771] Generating share/nrn/lib/hoc/import3d/read_nlcda3.hoc
[87/1771] Generating share/nrn/lib/hoc/import3d/read_nts.hoc
[88/1771] Generating share/nrn/lib/hoc/impratio.hoc
[89/1771] Generating share/nrn/lib/hoc/import3d/read_swc.hoc
[90/1771] Generating share/nrn/lib/hoc/inserter.hoc
[91/1771] Generating share/nrn/lib/hoc/lincir/elmbase.hoc
[92/1771] Generating share/nrn/lib/hoc/lincir.hoc
[93/1771] Generating help_data.dat
[94/1771] Generating share/nrn/lib/hoc/lincir/lincir1.hoc
[95/1771] Generating share/nrn/lib/hoc/lincir/lingraph.hoc
[96/1771] Generating share/nrn/lib/hoc/lincir/linmech.hoc
[97/1771] Generating share/nrn/lib/hoc/loadbal.hoc
[98/1771] Generating share/nrn/lib/hoc/logax.hoc
[99/1771] Generating share/nrn/lib/hoc/mkcurve.hoc
[100/1771] Generating share/nrn/lib/hoc/macload.hoc
[101/1771] Generating share/nrn/lib/hoc/mknrndll.hoc
[102/1771] Generating share/nrn/lib/hoc/modlunit.hoc
[103/1771] Generating share/nrn/lib/hoc/movierun.hoc
[104/1771] Generating share/nrn/lib/hoc/mulfit.hoc
[105/1771] Generating share/nrn/lib/hoc/mulfit/e_actpot.hoc
[106/1771] Generating share/nrn/lib/hoc/mulfit/clampfit.hoc
[107/1771] Generating share/nrn/lib/hoc/mulfit/e_norm.hoc
[108/1771] Generating share/nrn/lib/hoc/mulfit/eparmlst.hoc
[109/1771] Generating share/nrn/lib/hoc/mulfit/e_xy.hoc
[110/1771] Generating share/nrn/lib/hoc/mulfit/e_y.hoc
[111/1771] Generating share/nrn/lib/hoc/mulfit/eonerun.hoc
[112/1771] Generating share/nrn/lib/hoc/mulfit/eonefunc.hoc
[113/1771] Generating share/nrn/lib/hoc/mulfit/eoneprim.hoc
[114/1771] Generating share/nrn/lib/hoc/mulfit/fitparm.hoc
[115/1771] Generating share/nrn/lib/hoc/mulfit/optwrap.hoc
[116/1771] Generating share/nrn/lib/hoc/mulfit/mulfit1.hoc
[117/1771] Generating share/nrn/lib/hoc/mulfit/protorun.hoc
[118/1771] Generating share/nrn/lib/hoc/mview.hoc
[119/1771] Generating share/nrn/lib/hoc/mview/allpp.hoc
[120/1771] Generating share/nrn/lib/hoc/mview/allcell.hoc
[121/1771] Generating share/nrn/lib/hoc/mview/distinctparm.hoc
[122/1771] Generating share/nrn/lib/hoc/mview/artview.hoc
[123/1771] Generating share/nrn/lib/hoc/mview/distinct.hoc
[124/1771] Generating share/nrn/lib/hoc/mview/mview1.hoc
[125/1771] Generating share/nrn/lib/hoc/mview/mviewgui.hoc
[126/1771] Generating share/nrn/lib/hoc/mview/mviewxml.hoc
[127/1771] Generating share/nrn/lib/hoc/mview/parmsets.hoc
[128/1771] Generating share/nrn/lib/hoc/mview/ncview.hoc
[129/1771] Generating share/nrn/lib/hoc/mview/ppanal.hoc
[130/1771] Generating share/nrn/lib/hoc/mview/rcclasses.hoc
[131/1771] Generating share/nrn/lib/hoc/mview/parmvals.hoc
[132/1771] Generating share/nrn/lib/hoc/mview/realcell.hoc
[133/1771] Generating share/nrn/lib/hoc/mview/secanal.hoc
[134/1771] Generating share/nrn/lib/hoc/netbild.hoc
[135/1771] Generating share/nrn/lib/hoc/netbild/artcel.hoc
[136/1771] Generating share/nrn/lib/hoc/netbild/edgegui.hoc
[137/1771] Generating share/nrn/lib/hoc/mview/treeview.hoc
[138/1771] Generating share/nrn/lib/hoc/netbild/grstrlst.hoc
[139/1771] Generating share/nrn/lib/hoc/netbild/netdata.hoc
[140/1771] Generating share/nrn/lib/hoc/netbild/netgui.hoc
[141/1771] Generating share/nrn/lib/hoc/netbild/spkplot.hoc
[142/1771] Generating share/nrn/lib/hoc/netbild/netready.hoc
[143/1771] Generating share/nrn/lib/hoc/netbild/syntypes.hoc
[144/1771] Generating share/nrn/lib/hoc/noload.hoc
[145/1771] Generating share/nrn/lib/hoc/netparmpi.hoc
[146/1771] Generating share/nrn/lib/hoc/parcom.hoc
[147/1771] Generating share/nrn/lib/hoc/nrngui.hoc
[148/1771] Generating share/nrn/lib/hoc/nrngui1.hoc
[149/1771] Generating share/nrn/lib/hoc/pcchdir.hoc
[150/1771] Generating share/nrn/lib/hoc/pointbsr.hoc
[151/1771] Generating share/nrn/lib/hoc/pointgrp.hoc
[152/1771] Generating share/nrn/lib/hoc/pointman.hoc
[153/1771] Generating share/nrn/lib/hoc/runfit.hoc
[154/1771] Generating share/nrn/lib/hoc/shapebox.hoc
[155/1771] Generating share/nrn/lib/hoc/showmech.hoc
[156/1771] Generating share/nrn/lib/hoc/prcellstate.hoc
[157/1771] Generating share/nrn/lib/hoc/single.hoc
[158/1771] Generating share/nrn/lib/hoc/stdlib.hoc
[159/1771] Generating share/nrn/lib/hoc/single1.hoc
[160/1771] Generating share/nrn/lib/hoc/stdgui.hoc
[161/1771] Generating share/nrn/lib/hoc/stdrun.hoc
[162/1771] Generating share/nrn/lib/hoc/subiter.hoc
[163/1771] Generating share/nrn/lib/hoc/thresh.hoc
[164/1771] Generating share/nrn/lib/hoc/varmeth1.hoc
[165/1771] Generating share/nrn/lib/hoc/vecwrap.hoc
[166/1771] Generating share/nrn/lib/hoc/vplay.hoc
[167/1771] Generating share/nrn/lib/hoc/wingroup.hoc
[168/1771] Generating share/nrn/lib/hocload.sh
[169/1771] Generating share/nrn/lib/prologue.id
[170/1771] Generating share/nrn/lib/python/neuron/config.py
[171/1771] Generating share/nrn/lib/nrn.defaults.in
[172/1771] Generating share/nrn/lib/nrnunits.lib
[173/1771] Generating share/nrn/lib/python/neuron/__init__.py
[174/1771] Generating share/nrn/lib/python/neuron/coreneuron.py
[175/1771] Generating share/nrn/lib/python/neuron/crxd/__init__.py
[176/1771] Generating share/nrn/lib/python/neuron/doc.py
[177/1771] Generating share/nrn/lib/python/neuron/expect_hocerr.py
[178/1771] Generating share/nrn/lib/python/neuron/gui.py
[179/1771] Generating share/nrn/lib/python/neuron/gui2/plotshape.py
[180/1771] Generating share/nrn/lib/python/neuron/gui2/__init__.py
[181/1771] Generating share/nrn/lib/python/neuron/gui2/config.py
[182/1771] Generating share/nrn/lib/python/neuron/gui2/rangevar.py
[183/1771] Generating share/nrn/lib/python/neuron/hclass3.py
[184/1771] Generating share/nrn/lib/python/neuron/gui2/setup_threejs.py
[185/1771] Generating share/nrn/lib/python/neuron/gui2/utilities.py
[186/1771] Generating share/nrn/lib/python/neuron/neuroml/__init__.py
[187/1771] Generating share/nrn/lib/python/neuron/neuroml/biophysics.py
[188/1771] Generating share/nrn/lib/python/neuron/neuroml/metadata.py
[189/1771] Generating share/nrn/lib/python/neuron/neuroml/morphml.py
[190/1771] Generating share/nrn/lib/python/neuron/neuroml/neuroml.py
[191/1771] Generating share/nrn/lib/python/neuron/neuroml/rdxml.py
[192/1771] Generating share/nrn/lib/python/neuron/neuroml/xml2nrn.py
[193/1771] Generating share/nrn/lib/python/neuron/nonvint_block_supervisor.py
[194/1771] Generating share/nrn/lib/python/neuron/psection.py
[195/1771] Generating share/nrn/lib/python/neuron/rxd/__init__.py
[196/1771] Generating share/nrn/lib/python/neuron/rxd/constants.py
[197/1771] Generating share/nrn/lib/python/neuron/rxd/dimension3.py
[198/1771] Generating share/nrn/lib/python/neuron/rxd/export.py
[199/1771] Generating share/nrn/lib/python/neuron/rxd/geometry.py
[200/1771] Generating share/nrn/lib/python/neuron/rxd/generalizedReaction.py
[201/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/FullJoinMorph.py
[202/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/graphicsPrimitives.pyx
[203/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/__init__.py
[204/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/ctng.pyx
[205/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/scalarField.py
[206/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/GeneralizedVoxelization.py
[207/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/simplevolume_helper.py
[208/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/surface.py
[209/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/voxelize2.py
[210/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/triangularMesh.py
[211/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/voxelize.py
[212/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/surface_a.py
[213/1771] Generating share/nrn/lib/python/neuron/rxd/geometry3d/surfaces.pyx
[214/1771] Generating share/nrn/lib/python/neuron/rxd/gui.py
[215/1771] Generating share/nrn/lib/python/neuron/rxd/initializer.py
[216/1771] Generating share/nrn/lib/python/neuron/rxd/multiCompartmentReaction.py
[217/1771] Generating share/nrn/lib/python/neuron/rxd/nodelist.py
[218/1771] Generating share/nrn/lib/python/neuron/rxd/node.py
[219/1771] Generating share/nrn/lib/python/neuron/rxd/options.py
[220/1771] Generating share/nrn/lib/python/neuron/rxd/plugins.py
[221/1771] Generating share/nrn/lib/python/neuron/rxd/rangevar.py
[222/1771] Generating share/nrn/lib/python/neuron/rxd/rate.py
[223/1771] Generating share/nrn/lib/python/neuron/rxd/reaction.py
[224/1771] Generating share/nrn/lib/python/neuron/rxd/region.py
[225/1771] Generating share/nrn/lib/python/neuron/rxd/rxdException.py
[226/1771] Generating share/nrn/lib/python/neuron/rxd/rxd.py
[227/1771] Generating share/nrn/lib/python/neuron/rxd/rxdmath.py
[228/1771] Generating share/nrn/lib/python/neuron/rxd/rxdsection.py
[229/1771] Generating share/nrn/lib/python/neuron/rxd/section1d.py
[230/1771] Generating share/nrn/lib/python/neuron/rxd/species.py
[231/1771] Generating share/nrn/lib/python/neuron/rxdtests/do_test.py
[232/1771] Generating share/nrn/lib/python/neuron/rxdtests/readme.txt
[233/1771] Generating share/nrn/lib/python/neuron/rxdtests/run_all.py
[234/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/include_flux3d.py
[235/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/circadian_rhythm.py
[236/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/include_flux3d_cvode.py
[237/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/multicompartment_reactions.py
[238/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/pure_diffusion_3d.py
[239/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/pure_diffusion_3d_cvode.py
[240/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/3d/torun.txt
[241/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/IraHH.py
[242/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/c91662.swc
[243/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ca_pump.py
[244/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/cabuf.py
[245/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/cabuf_fixed_step.py
[246/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_before_sections.py
[247/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_example.py
[248/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_include_flux_cvode.py
[249/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_include_flux.py
[250/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_example_cvode.py
[251/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_multi_example.py
[252/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/pump.mod
[253/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hh.py
[254/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/ecs_multi_example_cvode.py
[255/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/ecs/torun.txt
[256/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hh_morph.py
[257/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hh_param.py
[258/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hh_cvode.py
[259/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hh_param_cvode.py
[260/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/bistable_hybrid.py
[261/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/bistable_hybrid_change_nthread.py
[262/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/bistable_hybrid_cvode.py
[263/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/pure_diffusion_hybrid.py
[264/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/pure_diffusion_hybrid_cvode.py
[265/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/torun.txt
[266/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/include_flux.py
[267/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/multicompartment_mebrane_mismatch.py
[268/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/hybrid/bistable_hybrid_cvode_change_nthread.py
[269/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/include_flux_cvode.py
[270/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/multicompartment_reactions.py
[271/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/multicompartment_reactions_with_v.py
[272/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/multicompartment_reactions_del.py
[273/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/react_region_specified.py
[274/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/nodes_update.py
[275/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/pure_diffusion.py
[276/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/pure_diffusion_cvode.py
[277/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/reaction_null_dest.py
[278/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/reaction_param_test.py
[279/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/reaction_test.py
[280/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/torun.txt
[281/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/verify_no_initialization_order_issue.py
[282/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/cal2.mod
[283/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/caleak.mod
[284/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/readme.txt
[285/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/torun.txt
[286/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_125_1.py
[287/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_25_5.py
[288/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_taper_125_1.py
[289/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_taper_25_5.py
[290/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_tree2_125_1.py
[291/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_tree2_25_5.py
[292/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_tree_25_5.py
[293/1771] Generating share/nrn/lib/python/neuron/rxdtests/tests/wave1d/wave1d_tree_125_1.py
[294/1771] Generating share/nrn/lib/python/neuron/sections.py
[295/1771] Generating share/nrn/lib/python/neuron/tests/_subclass.py
[296/1771] Generating share/nrn/lib/python/neuron/tests/test_all.py
[297/1771] Generating share/nrn/lib/python/neuron/tests/test_neuron.py
[298/1771] Generating share/nrn/lib/python/neuron/tests/test_vector.py
[299/1771] Generating share/nrn/lib/python/neuron/tests/__init__.py
[300/1771] Generating share/nrn/lib/python/neuron/tests/test_rxd.py
[301/1771] Generating share/nrn/lib/python/neuron/tests/utils/capture_stdout.py
[302/1771] Generating share/nrn/lib/python/neuron/tests/utils/strtobool.py
[303/1771] Generating share/nrn/lib/python/neuron/tests/utils/checkresult.py
[304/1771] Generating share/nrn/lib/python/neuron/tests/utils/__init__.py
[305/1771] Generating share/nrn/lib/python/scripts/modlunit
[306/1771] Generating share/nrn/lib/python/scripts/_README.txt
[307/1771] Generating share/nrn/lib/python/scripts/idraw
[308/1771] Generating share/nrn/lib/python/scripts/neurondemo
[309/1771] Generating share/nrn/lib/python/neuron/units.py
[310/1771] Generating share/nrn/lib/python/scripts/_binwrapper.py
[311/1771] Generating share/nrn/lib/python/scripts/mkthreadsafe
[312/1771] Generating share/nrn/lib/python/scripts/nmodl
[313/1771] Generating share/nrn/lib/python/scripts/nrngui
[314/1771] Generating share/nrn/lib/python/scripts/nrniv
[315/1771] Generating share/nrn/lib/python/scripts/nrniv-core
[316/1771] Generating share/nrn/lib/python/scripts/nrnivmodl
[317/1771] Generating share/nrn/lib/python/scripts/nrnivmodl-core
[318/1771] Generating share/nrn/lib/python/scripts/nrnpyenv.sh
[319/1771] Generating share/nrn/lib/python/scripts/sortspike
[320/1771] Generating share/nrn/lib/shape.cm1
[321/1771] Generating share/nrn/lib/shape.cm2
[322/1771] Generating include/backtrace_utils.h
[323/1771] Generating include/bbsavestate.h
[324/1771] Generating include/cabvars.h
[325/1771] Generating include/crout.hpp
[326/1771] Generating include/crout_thread.hpp
[327/1771] Generating include/cspmatrix.h
[328/1771] Generating include/cspredef.h
[329/1771] Generating include/deflate.hpp
[330/1771] Generating include/dimplic.hpp
[331/1771] Generating include/errcodes.hpp
[332/1771] Generating include/euler.hpp
[333/1771] Generating include/euler_thread.hpp
[334/1771] Generating include/hoc_membf.h
[335/1771] Generating include/hocassrt.h
[336/1771] Generating include/hoclist.h
[337/1771] Generating include/mcran4.h
[338/1771] Generating include/hoc.h
[339/1771] Generating include/hocgetsym.h
[340/1771] Generating include/md2redef.h
[341/1771] Generating include/hocdec.h
[342/1771] Generating include/hocparse.h
[343/1771] Generating include/md1redef.h
[344/1771] Generating include/mech_api.h
[345/1771] Generating include/multisplit.h
[346/1771] Generating include/membfunc.h
[347/1771] Generating include/membdef.h
[348/1771] Generating include/neuron/cache/mechanism_range.hpp
[349/1771] Generating include/multicore.h
[350/1771] Generating include/neuron/container/data_handle.hpp
[351/1771] Generating include/neuron/container/generic_data_handle.hpp
[352/1771] Generating include/neuron.h
[353/1771] Generating include/neuron/model_data_fwd.hpp
[354/1771] Generating include/neuron/container/non_owning_soa_identifier.hpp
[355/1771] Generating include/newton.hpp
[356/1771] Generating include/newton_thread.hpp
[357/1771] Generating include/nrn_ansi.h
[358/1771] Generating include/newton_struct.h
[359/1771] Generating include/nmodlmutex.h
[360/1771] Generating include/nrnapi.h
[361/1771] Generating include/nrnassrt.h
[362/1771] Generating include/nrncvode.h
[363/1771] Generating include/nrnmpidec.h
[364/1771] Generating include/nrnoc_ml.h
[365/1771] Generating include/nrnisaac.h
[366/1771] Generating include/nrniv_mf.h
[367/1771] Generating include/nrnmpi.h
[368/1771] Generating include/nrnran123.h
[369/1771] Generating include/nrnrandom.h
[370/1771] Generating include/oc_ansi.h
[371/1771] Generating include/nrnredef.h
[372/1771] Generating include/nrnversionmacros.h
[373/1771] Generating include/ocfunc.h
[374/1771] Generating include/options.h
[375/1771] Generating include/ocmisc.h
[376/1771] Generating include/parse_with_deps.hpp
[377/1771] Generating include/row_view.hpp
[378/1771] Generating include/scoplib.h
[379/1771] Generating include/runge.hpp
[380/1771] Generating include/simeq.hpp
[381/1771] Generating include/section_fwd.hpp
[382/1771] Generating include/sparse.hpp
[383/1771] Generating include/sparse_thread.hpp
[384/1771] Generating include/spconfig.h
[385/1771] Generating include/spmatrix.h
[386/1771] Generating include/ssimplic_thread.hpp
[387/1771] Generating include/ssimplic.hpp
[388/1771] Generating include/treeset.h
[389/1771] Generating include/wrap_sprintf.h
[390/1771] Building CXX object src/coreneuron/CMakeFiles/corenrn_mpi.dir/mpi/lib/mpispike.cpp.o
[391/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/mem_layout_util.cpp.o
[392/1771] Building CXX object src/coreneuron/CMakeFiles/corenrn_mpi.dir/mpi/lib/nrnmpi.cpp.o
[393/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/global_vars.cpp.o
[394/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/lfp.cpp.o
[395/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/mech_report.cpp.o
[396/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/gpu/nrn_acc_manager.cpp.o
[397/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/apps/main1.cpp.o
[398/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/mk_mech.cpp.o
[399/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/nrn_filehandler.cpp.o
[400/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/core2nrn_data_return.cpp.o
[401/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/nrn2core_data_init.cpp.o
[402/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/output_spikes.cpp.o
[403/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/phase1.cpp.o
[404/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/nrn_checkpoint.cpp.o
[405/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/reports/nrnreport.cpp.o
[406/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/reports/report_event.cpp.o
[407/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/reports/report_configuration_parser.cpp.o
[408/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/reports/report_handler.cpp.o
[409/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/reports/sonata_report_handler.cpp.o
[410/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/setup_fornetcon.cpp.o
[411/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mechanism/capac.cpp.o
[412/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/prcellstate.cpp.o
[413/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mpi/core/nrnmpi_def_cinc.cpp.o
[414/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mechanism/eion.cpp.o
[415/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/phase2.cpp.o
[416/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mechanism/patternstim.cpp.o
[417/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mechanism/mech_mapping.cpp.o
[418/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/io/nrn_setup.cpp.o
[419/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/multisend.cpp.o
[420/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/cvodestb.cpp.o
[421/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/multisend_setup.cpp.o
[422/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/permute/balance.cpp.o
[423/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/partrans.cpp.o
[424/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/tqueue.cpp.o
[425/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mechanism/register_mech.cpp.o
[426/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/netcvode.cpp.o
[427/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/permute/cellorder.cpp.o
[428/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/permute/data_layout.cpp.o
[429/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/partrans_setup.cpp.o
[430/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/fast_imem.cpp.o
[431/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/permute/cellorder2.cpp.o
[432/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/network/netpar.cpp.o
[433/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/permute/cellorder1.cpp.o
[434/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/fadvance_core.cpp.o
[435/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/ivocvect.cpp.o
[436/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/scopmath/abort.cpp.o
[437/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/scopmath/newton_thread.cpp.o
[438/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/finitialize.cpp.o
[439/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/permute/node_permute.cpp.o
[440/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/solve_core.cpp.o
[441/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/progressbar/progressbar.cpp.o
[442/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/treeset_core.cpp.o
[443/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/memory.cpp.o
[444/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/string_utils.cpp.o
[445/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/lpt.cpp.o
[446/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/memory_utils.cpp.o
[447/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/nrntimeout.cpp.o
[448/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/sim/multicore.cpp.o
[449/1771] Generating ../../share/coreneuron/enginemech.cpp
[450/1771] Generating ../../share/modfile/exp2syn.mod
[451/1771] Generating ../../share/coreneuron/mod_func.c.pl
[452/1771] Generating ../../share/modfile/expsyn.mod
[453/1771] Generating ../../share/modfile/hh.mod
[454/1771] Generating ../../share/modfile/passive.mod
[455/1771] Generating ../../share/modfile/netstim.mod
[456/1771] Generating ../../share/modfile/pattern.mod
[457/1771] Generating ../../share/modfile/stim.mod
[458/1771] Generating ../../share/modfile/svclmp.mod
[459/1771] Generating ../../include/coreneuron/config/neuron_version.hpp
[460/1771] Generating ../../include/coreneuron/apps/corenrn_parameters.hpp
[461/1771] Generating ../../include/coreneuron/config/config.h
[462/1771] Generating ../../include/coreneuron/config/version_macros.hpp
[463/1771] Generating ../../include/coreneuron/coreneuron.hpp
[464/1771] Generating ../../include/coreneuron/gpu/nrn_acc_manager.hpp
[465/1771] Generating ../../include/coreneuron/io/core2nrn_data_return.hpp
[466/1771] Generating ../../include/coreneuron/io/lfp.hpp
[467/1771] Generating ../../include/coreneuron/io/mech_report.h
[468/1771] Generating ../../include/coreneuron/io/mem_layout_util.hpp
[469/1771] Generating ../../include/coreneuron/io/nrn2core_direct.h
[470/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/nrn_stats.cpp.o
[471/1771] Generating ../../include/coreneuron/io/nrn_checkpoint.hpp
[472/1771] Generating ../../include/coreneuron/io/nrn_filehandler.hpp
[473/1771] Generating ../../include/coreneuron/io/nrn_setup.hpp
[474/1771] Generating ../../include/coreneuron/io/nrnsection_mapping.hpp
[475/1771] Generating ../../include/coreneuron/io/output_spikes.hpp
[476/1771] Generating ../../include/coreneuron/io/phase1.hpp
[477/1771] Generating ../../include/coreneuron/io/phase2.hpp
[478/1771] Generating ../../include/coreneuron/io/prcellstate.hpp
[479/1771] Generating ../../include/coreneuron/io/reports/nrnreport.hpp
[480/1771] Generating ../../include/coreneuron/io/reports/report_event.hpp
[481/1771] Generating ../../include/coreneuron/io/reports/report_handler.hpp
[482/1771] Generating ../../include/coreneuron/io/reports/sonata_report_handler.hpp
[483/1771] Generating ../../include/coreneuron/io/setup_fornetcon.hpp
[484/1771] Generating ../../include/coreneuron/io/user_params.hpp
[485/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/nrnoc_aux.cpp.o
[486/1771] Generating ../../include/coreneuron/mechanism/eion.hpp
[487/1771] Generating ../../include/coreneuron/mechanism/mech/cfile/cabvars.h
[488/1771] Generating ../../include/coreneuron/mechanism/mech/mod2c_core_thread.hpp
[489/1771] Generating ../../include/coreneuron/mechanism/mech_mapping.hpp
[490/1771] Generating ../../include/coreneuron/mechanism/mechanism.hpp
[491/1771] Generating ../../include/coreneuron/mechanism/membfunc.hpp
[492/1771] Generating ../../include/coreneuron/mechanism/register_mech.hpp
[493/1771] Generating ../../include/coreneuron/mpi/core/nrnmpi.hpp
[494/1771] Generating ../../include/coreneuron/membrane_definitions.h
[495/1771] Generating ../../include/coreneuron/mpi/lib/nrnmpi.hpp
[496/1771] Generating ../../include/coreneuron/mpi/nrnmpi.h
[497/1771] Generating ../../include/coreneuron/mpi/nrnmpidec.h
[498/1771] Generating ../../include/coreneuron/mpi/nrnmpiuse.h
[499/1771] Generating ../../include/coreneuron/network/have2want.h
[500/1771] Generating ../../include/coreneuron/network/multisend.hpp
[501/1771] Generating ../../include/coreneuron/network/netcon.hpp
[502/1771] Generating ../../include/coreneuron/network/netcvode.hpp
[503/1771] Generating ../../include/coreneuron/network/partrans.hpp
[504/1771] Generating ../../include/coreneuron/network/netpar.hpp
[505/1771] Generating ../../include/coreneuron/network/tnode.hpp
[506/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/utils.cpp.o
[507/1771] Generating ../../include/coreneuron/network/tqueue.hpp
[508/1771] Generating ../../include/coreneuron/nrnconf.h
[509/1771] Generating ../../include/coreneuron/nrniv/nrniv_decl.h
[510/1771] Generating ../../include/coreneuron/nrnoc/md2redef.h
[511/1771] Generating ../../include/coreneuron/nrnoc/md1redef.h
[512/1771] Generating ../../include/coreneuron/permute/cellorder.hpp
[513/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/__/__/coreneuron/config/config.cpp.o
[514/1771] Generating ../../include/coreneuron/permute/data_layout.hpp
[515/1771] Generating ../../include/coreneuron/permute/node_permute.h
[516/1771] Generating ../../include/coreneuron/sim/multicore.hpp
[517/1771] Generating ../../include/coreneuron/sim/fast_imem.hpp
[518/1771] Generating ../../include/coreneuron/sim/scopmath/crout_thread.hpp
[519/1771] Generating ../../include/coreneuron/sim/scopmath/errcodes.h
[520/1771] Generating ../../include/coreneuron/sim/scopmath/newton_struct.h
[521/1771] Generating ../../include/coreneuron/sim/scopmath/newton_thread.hpp
[522/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/randoms/nrnran123.cpp.o
[523/1771] Generating ../../include/coreneuron/sim/scopmath/sparse_thread.hpp
[524/1771] Generating ../../include/coreneuron/utils/ivocvect.hpp
[525/1771] Generating ../../include/coreneuron/sim/scopmath/ssimplic_thread.hpp
[526/1771] Generating ../../include/coreneuron/utils/lpt.hpp
[527/1771] Generating ../../include/coreneuron/utils/memory_utils.h
[528/1771] Generating ../../include/coreneuron/utils/memory.h
[529/1771] Generating ../../include/coreneuron/utils/nrn_assert.h
[530/1771] Generating ../../include/coreneuron/utils/nrnoc_aux.hpp
[531/1771] Generating ../../include/coreneuron/utils/nrn_stats.h
[532/1771] Generating ../../include/coreneuron/utils/nrnmutdec.hpp
[533/1771] Generating ../../include/coreneuron/utils/offload.hpp
[534/1771] Generating ../../include/coreneuron/utils/profile/profiler_interface.h
[535/1771] Generating ../../include/coreneuron/utils/progressbar/progressbar.hpp
[536/1771] Generating ../../include/coreneuron/utils/randoms/nrnran123.h
[537/1771] Generating ../../include/coreneuron/utils/units.hpp
[538/1771] Generating ../../include/coreneuron/utils/string_utils.h
[539/1771] Generating ../../include/coreneuron/utils/utils.hpp
[540/1771] Generating ../../include/coreneuron/utils/utils_cuda.h
[541/1771] Generating ../../include/coreneuron/nrniv/profiler_interface.h
[542/1771] Generating ../../include/coreneuron/utils/vrecitem.h
[543/1771] Generating ../../share/coreneuron/coreneuron.cpp
[544/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/mpi/core/resolve.cpp.o
[545/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/utils/vrecord.cpp.o
[546/1771] -- NMODL : GENERATING AST CLASSES WITH PYTHON GENERATOR! --
[547/1771] Building CXX object external/nmodl/ext/fmt/CMakeFiles/fmt.dir/src/os.cc.o
[548/1771] -- NMODL : GENERATING VERBATIM PARSER WITH BISON! --
../../../../../external/nmodl/src/parser/verbatim.yy:29.1-24: warning: deprecated directive: '%name-prefix "Verbatim_"', use '%define api.prefix {Verbatim_}' [-Wdeprecated]
   29 | %name-prefix "Verbatim_"
      | ^~~~~~~~~~~~~~~~~~~~~~~~
      | %define api.prefix {Verbatim_}
../../../../../external/nmodl/src/parser/verbatim.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
[549/1771] -- NMODL : GENERATING DIFFERENTIAL EQUATION PARSER WITH BISON! --
../../../../../external/nmodl/src/parser/diffeq.yy:56.1-40: warning: deprecated directive: '%define parser_class_name {DiffeqParser}', use '%define api.parser.class {DiffeqParser}' [-Wdeprecated]
   56 | %define parser_class_name {DiffeqParser}
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      | %define api.parser.class {DiffeqParser}
../../../../../external/nmodl/src/parser/diffeq.yy: warning: 2 shift/reduce conflicts [-Wconflicts-sr]
../../../../../external/nmodl/src/parser/diffeq.yy: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
../../../../../external/nmodl/src/parser/diffeq.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
[550/1771] Building CXX object external/nmodl/ext/spdlog/CMakeFiles/spdlog.dir/src/file_sinks.cpp.o
[551/1771] -- NMODL : GENERATING UNIT PARSER WITH BISON! --
../../../../../external/nmodl/src/parser/unit.yy:49.1-38: warning: deprecated directive: '%define parser_class_name {UnitParser}', use '%define api.parser.class {UnitParser}' [-Wdeprecated]
   49 | %define parser_class_name {UnitParser}
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      | %define api.parser.class {UnitParser}
../../../../../external/nmodl/src/parser/unit.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
[552/1771] Building CXX object external/nmodl/ext/spdlog/CMakeFiles/spdlog.dir/src/cfg.cpp.o
[553/1771] Building CXX object external/nmodl/ext/spdlog/CMakeFiles/spdlog.dir/src/stdout_sinks.cpp.o
[554/1771] Building CXX object external/nmodl/ext/spdlog/CMakeFiles/spdlog.dir/src/color_sinks.cpp.o
[555/1771] -- NMODL : GENERATING C (11) PARSER WITH BISON! --
../../../../../external/nmodl/src/parser/c11.yy:52.1-35: warning: deprecated directive: '%define parser_class_name {CParser}', use '%define api.parser.class {CParser}' [-Wdeprecated]
   52 | %define parser_class_name {CParser}
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      | %define api.parser.class {CParser}
../../../../../external/nmodl/src/parser/c11.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
[556/1771] Building CXX object external/nmodl/ext/spdlog/CMakeFiles/spdlog.dir/src/async.cpp.o
[557/1771] Building CXX object external/nmodl/src/printer/CMakeFiles/printer.dir/nmodl_printer.cpp.o
[558/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/common_utils.cpp.o
[559/1771] Building CXX object external/nmodl/src/printer/CMakeFiles/printer.dir/code_printer.cpp.o
[560/1771] -- NMODL : GENERATING NMODL_CORE PARSER WITH BISON! --
../../../../../external/nmodl/src/parser/nmodl.yy:64.1-39: warning: deprecated directive: '%define parser_class_name {NmodlParser}', use '%define api.parser.class {NmodlParser}' [-Wdeprecated]
   64 | %define parser_class_name {NmodlParser}
      | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
      | %define api.parser.class {NmodlParser}
../../../../../external/nmodl/src/parser/nmodl.yy: warning: 3 shift/reduce conflicts [-Wconflicts-sr]
../../../../../external/nmodl/src/parser/nmodl.yy: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
../../../../../external/nmodl/src/parser/nmodl.yy: warning: fix-its can be applied.  Rerun with option '--update'. [-Wother]
[561/1771] Building CXX object external/nmodl/ext/fmt/CMakeFiles/fmt.dir/src/format.cc.o
[562/1771] Linking CXX static library lib/libfmt.a
[563/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/file_library.cpp.o
[564/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/string_utils.cpp.o
[565/1771] Generating ../../../../lib/nmodl/__init__.py
[566/1771] Generating ../../../../lib/nmodl/ast.py
[567/1771] Generating ../../../../lib/nmodl/dsl.py
[568/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/perf_stat.cpp.o
[569/1771] Generating ../../../../lib/nmodl/ode.py
[570/1771] Generating ../../../../lib/nmodl/symtab.py
[571/1771] Generating ../../../../lib/nmodl/visitor.py
[572/1771] Generating ../../../../include/newton/newton.hpp
[573/1771] Generating ../../../../include/crout/crout.hpp
[574/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/table_data.cpp.o
[575/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/__/config/config.cpp.o
[576/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/spalloc.cpp.o
[577/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/spbuild.cpp.o
[578/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/spoutput.cpp.o
[579/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/spfactor.cpp.o
[580/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/spsolve.cpp.o
[581/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/sputils.cpp.o
[582/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/cspalloc.cpp.o
[583/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/cspbuild.cpp.o
[584/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/cspoutput.cpp.o
[585/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/cspfactor.cpp.o
[586/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/cspsolve.cpp.o
[587/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/ACG.cpp.o
[588/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/DiscUnif.cpp.o
[589/1771] Building CXX object src/sparse13/CMakeFiles/sparse13.dir/csputils.cpp.o
[590/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Binomial.cpp.o
[591/1771] Linking CXX static library lib/libsparse13.a
[592/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Erlang.cpp.o
[593/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/HypGeom.cpp.o
[594/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Geom.cpp.o
[595/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/LogNorm.cpp.o
[596/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/MLCG.cpp.o
[597/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/NegExp.cpp.o
[598/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Normal.cpp.o
[599/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Poisson.cpp.o
[600/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Random.cpp.o
[601/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/RndInt.cpp.o
[602/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/RNG.cpp.o
[603/1771] [FLEX][modlunitlexer] Building scanner with flex 2.6.4
[604/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Uniform.cpp.o
[605/1771] [FLEX][nocmodllexer] Building scanner with flex 2.6.4
[606/1771] [BISON][nocmodlparser] Building parser with bison 3.8.2
../src/nmodl/diffeq.ypp: warning: 5 shift/reduce conflicts [-Wconflicts-sr]
../src/nmodl/diffeq.ypp: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[607/1771] Building CXX object src/gnu/CMakeFiles/nrngnu.dir/Weibull.cpp.o
[608/1771] Building CXX object external/nmodl/src/printer/CMakeFiles/printer.dir/json_printer.cpp.o
[609/1771] Linking CXX static library lib/libnrngnu.a
[610/1771] Generating ../oc/hocusr.h
[611/1771] Generating ../../share/nrn/nrnmain.cpp
[612/1771] Generating ../../include/nrnmpiuse.h
[613/1771] Generating ../../include/nrncvode/nrnneosm.h
[614/1771] [BISON][modlunitparser] Building parser with bison 3.8.2
[615/1771] Generating ../../include/nrnconf.h
[616/1771] [BISON][ocparser] Building parser with bison 3.8.2
../src/oc/parse.ypp: warning: 96 shift/reduce conflicts [-Wconflicts-sr]
../src/oc/parse.ypp: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[617/1771] [BISON][nocmodlparser] Building parser with bison 3.8.2
../src/nmodl/parse1.ypp: warning: 3 shift/reduce conflicts [-Wconflicts-sr]
../src/nmodl/parse1.ypp: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples
[618/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/consist.cpp.o
[619/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/declare.cpp.o
[620/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/init.cpp.o
[621/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/io.cpp.o
[622/1771] Building CXX object src/coreneuron/CMakeFiles/coreneuron-core.dir/apps/corenrn_parameters.cpp.o
[623/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/kinunit.cpp.o
[624/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/list.cpp.o
[625/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/model.cpp.o
[626/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/nrnunit.cpp.o
[627/1771] Building CXX object external/nmodl/ext/spdlog/CMakeFiles/spdlog.dir/src/spdlog.cpp.o
[628/1771] Linking CXX static library lib/libcoreneuron-core.a
[629/1771] cd /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/nrnoc && /opt/homebrew/Cellar/cmake/3.24.2/bin/cmake -E env PROJECT_VERSION=9.0.0 bash /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/git2nrnversion_h.sh /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn > nrnversion.h.tmp && /opt/homebrew/Cellar/cmake/3.24.2/bin/cmake -E copy_if_different nrnversion.h.tmp nrnversion.h
fatal: No names found, cannot describe anything.
[630/1771] Linking CXX static library lib/libspdlog.a
[631/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/passn.cpp.o
[632/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/symbol.cpp.o
[633/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/units.cpp.o
[634/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/units1.cpp.o
[635/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/__/modlunit/version.cpp.o
[636/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/modlunit_generated/lex.cpp.o
[637/1771] Building CXX object src/nrniv/CMakeFiles/modlunit.dir/modlunit_generated/parse1.cpp.o
[638/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/consist.cpp.o
[639/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/discrete.cpp.o
[640/1771] Linking CXX executable bin/modlunit
[641/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/deriv.cpp.o
[642/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/init.cpp.o
[643/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/io.cpp.o
[644/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/pyembed.dir/pyembed.cpp.o
[645/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/pywrapper.dir/wrapper.cpp.o
[646/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/list.cpp.o
[647/1771] Linking CXX static library lib/libpywrapper.a
[648/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/noccout.cpp.o
[649/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/kinetic.cpp.o
[650/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/parsact.cpp.o
[651/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/netrec_discon.cpp.o
[652/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/simultan.cpp.o
[653/1771] Building CXX object external/nmodl/src/utils/CMakeFiles/util.dir/logger.cpp.o
[654/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/version.cpp.o
[655/1771] Generating sortspike
[656/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/solve.cpp.o
[657/1771] Generating coreneuron_standalone/test_nrn_corenrn_standalone/test/coreneuron/test_psolve.py
[658/1771] Generating nrniv_script.py/do_nothing.py
[659/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/units.cpp.o
[660/1771] Generating nrniv_script.py_error/assert_false.py
[661/1771] Generating nrniv_two_scripts.py/do_nothing.py
[662/1771] Generating nrniv_two_scripts.py_error_check_code/assert_false.py
[663/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/symbol.cpp.o
[664/1771] Generating nrniv_two_scripts.py_error_check_code/do_nothing.py
[665/1771] Linking CXX static library lib/libutil.a
[666/1771] Generating nrniv_two_scripts.py_error_check_output/assert_false.py
[667/1771] Generating nrniv_two_scripts.py_error_check_output/do_nothing.py
[668/1771] Generating nrniv_python_script.py/do_nothing.py
[669/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/nocmodl_generated/lex.cpp.o
[670/1771] -- NMODL : GENERATING NMODL LEXER WITH FLEX! --
../../../../../external/nmodl/src/lexer/nmodl.ll:503: warning, -s option given but default rule can be matched
[671/1771] -- NMODL : GENERATING VERBATIM LEXER WITH FLEX! --
[672/1771] -- NMODL : GENERATING DIFFERENTIAL EQUATION LEXER WITH FLEX! --
../../../../../external/nmodl/src/lexer/diffeq.ll:100: warning, -s option given but default rule can be matched
[673/1771] Building CXX object src/nrnpython/CMakeFiles/rxdmath.dir/rxdmath.cpp.o
[674/1771] -- NMODL : GENERATING C(11) LEXER WITH FLEX! --
[675/1771] Generating nrniv_python_script.py_twice/assert_false.py
[676/1771] Generating nrniv_python_script.py_error/assert_false.py
[677/1771] Generating nrniv_python_script.py_twice/do_nothing.py
[678/1771] Generating nrniv_python_script.py_args/assert_last_args_are_foo_and_bar.py
[679/1771] Generating nrniv_py3.10_python_check_sys_path/check_sys_attr.py
[680/1771] -- NMODL : GENERATING UNIT LEXER WITH FLEX! --
../../../../../external/nmodl/src/lexer/unit.ll:171: warning, -s option given but default rule can be matched
[681/1771] Generating nrniv_py3.10_python_check_sys_path/dump_sys_attr.py
[682/1771] Generating nrniv_py3.10_nrnpython_check_sys_path/check_sys_attr.hoc
[683/1771] Generating nrniv_py3.10_nrnpython_check_sys_path/dump_sys_attr.py
[684/1771] Linking CXX static library lib/libpyembed.a
[685/1771] Linking CXX shared library lib/librxdmath.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
[686/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/nocmodl_generated/parse1.cpp.o
[687/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/nocmodl_generated/diffeq.cpp.o
[688/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/nocpout.cpp.o
[689/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_transform_visitor.cpp.o
[690/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_info.cpp.o
[691/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/token_mapping.cpp.o
[692/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/modtoken.cpp.o
[693/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_utils.cpp.o
[694/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_acc_visitor.cpp.o
[695/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/verbatim_lexer.cpp.o
[696/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_compatibility_visitor.cpp.o
[697/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/nmodl_utils.cpp.o
[698/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/diffeq_base_lexer.cpp.o
[699/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_helper_visitor.cpp.o
[700/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/c11_base_lexer.cpp.o
[701/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/diffeq_driver.cpp.o
[702/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/diffeq_context.cpp.o
[703/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/unit_base_lexer.cpp.o
[704/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/c11_driver.cpp.o
[705/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/verbatim_parser.cpp.o
[706/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/nmodl_base_lexer.cpp.o
[707/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/unit_driver.cpp.o
[708/1771] Building CXX object src/nrniv/CMakeFiles/nocmodl.dir/__/nmodl/modl.cpp.o
[709/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/diffeq/diffeq_parser.cpp.o
[710/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/c/c11_parser.cpp.o
[711/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/unit/unit_parser.cpp.o
[712/1771] Building CXX object external/nmodl/src/symtab/CMakeFiles/symtab.dir/symbol_properties.cpp.o
[713/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/nmodl_driver.cpp.o
[714/1771] Building CXX object external/nmodl/src/symtab/CMakeFiles/symtab.dir/symbol.cpp.o
[715/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/units/units.cpp.o
[716/1771] Building CXX object external/nmodl/src/symtab/CMakeFiles/symtab.dir/symbol_table.cpp.o
[717/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/global_var_visitor.cpp.o
[718/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/implicit_argument_visitor.cpp.o
[719/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/indexedname_visitor.cpp.o
[720/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/after_cvode_to_cnexp_visitor.cpp.o
[721/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/constant_folder_visitor.cpp.o
[722/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/local_to_assigned_visitor.cpp.o
[723/1771] Building CXX object external/nmodl/src/codegen/CMakeFiles/codegen.dir/codegen_cpp_visitor.cpp.o
[724/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/parser/nmodl/nmodl_parser.cpp.o
[725/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/defuse_analyze_visitor.cpp.o
[726/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/local_var_rename_visitor.cpp.o
[727/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/perf_visitor.cpp.o
[728/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/kinetic_block_visitor.cpp.o
[729/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/loop_unroll_visitor.cpp.o
[730/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/inline_visitor.cpp.o
[731/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/neuron_solve_visitor.cpp.o
[732/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/localize_visitor.cpp.o
[733/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/solve_block_visitor.cpp.o
[734/1771] Building CXX object external/nmodl/src/lexer/CMakeFiles/lexer.dir/__/ast/ast.cpp.o
[735/1771] Linking CXX static library lib/liblexer.a
[736/1771] Linking CXX static library lib/libsymtab.a
[737/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/semantic_analysis_visitor.cpp.o
[738/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/rename_visitor.cpp.o
[739/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/var_usage_visitor.cpp.o
[740/1771] Building CXX object external/nmodl/src/CMakeFiles/nmodl.dir/main.cpp.o
[741/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/verbatim_visitor.cpp.o
[742/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/units_visitor.cpp.o
[743/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/ast_visitor.cpp.o
[744/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/steadystate_visitor.cpp.o
[745/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/checkparent_visitor.cpp.o
[746/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/lookup_visitor.cpp.o
[747/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/json_visitor.cpp.o
[748/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/verbatim_var_rename_visitor.cpp.o
[749/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/visitor_utils.cpp.o
[750/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/nmodl_visitor.cpp.o
[751/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/sympy_replace_solutions_visitor.cpp.o
[752/1771] Linking CXX executable bin/nocmodl
[753/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/sympy_conductance_visitor.cpp.o
[754/1771] Generating ../nrnoc/exp2syn.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/exp2syn.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/exp2syn.cpp
Thread Safe
[755/1771] Generating ../nrnoc/apcount.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/apcount.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/apcount.cpp
Thread Safe
[756/1771] Generating ../nrnoc/expsyn.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/expsyn.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/expsyn.cpp
Thread Safe
[757/1771] Generating ../nrnoc/feature.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/feature.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/feature.cpp
Notice: VERBATIM blocks are not thread safe
[758/1771] Generating ../nrnoc/hh.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/hh.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/hh.cpp
Thread Safe
    [759/1771] Generating ../nrnoc/intfire1.cpp

Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/intfire1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/intfire1.cpp
Thread Safe
[760/1771] Generating ../nrnoc/intfire2.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/intfire2.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/intfire2.cpp
Thread Safe
[761/1771] Generating ../nrnoc/intfire4.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/intfire4.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/intfire4.cpp
Thread Safe
[762/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/symtab_visitor.cpp.o
[763/1771] Generating ../nrnoc/netstim.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/netstim.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/netstim.cpp
Thread Safe
Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it
only affects and is affected by discrete events. As such it is not
located in a section and is not associated with an integrator
[764/1771] Generating ../nrnoc/oclmp.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/oclmp.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/oclmp.cpp
Thread Safe
[765/1771] Generating ../nrnoc/passive.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/passive.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/passive.cpp
Thread Safe
[766/1771] Generating ../nrnoc/pattern.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/pattern.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/pattern.cpp
Thread Safe
Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it
only affects and is affected by discrete events. As such it is not
located in a section and is not associated with an integrator
[767/1771] Generating ../nrnoc/ppmark.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/ppmark.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/ppmark.cpp
Thread Safe
[768/1771] Generating ../nrnoc/stim.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/stim.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/stim.cpp
Thread Safe
[769/1771] Generating ../nrnoc/syn.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/syn.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/syn.cpp
Thread Safe
[770/1771] Generating ../nrnoc/svclmp.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/svclmp.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/svclmp.cpp
Thread Safe
[771/1771] Generating nrniv_py3.10_python_check_sys_prefix/check_sys_attr.py
[772/1771] Generating nrniv_py3.10_python_check_sys_prefix/dump_sys_attr.py
[773/1771] Generating nrniv_py3.10_nrnpython_check_sys_prefix/check_sys_attr.hoc
[774/1771] Generating nrniv_py3.10_nrnpython_check_sys_prefix/dump_sys_attr.py
[775/1771] Generating nrniv_py3.10_python_check_sys_exec_prefix/check_sys_attr.py
[776/1771] Generating nrniv_py3.10_python_check_sys_exec_prefix/dump_sys_attr.py
[777/1771] Generating nrniv_py3.10_nrnpython_check_sys_exec_prefix/check_sys_attr.hoc
[778/1771] Generating nrniv_py3.10_nrnpython_check_sys_exec_prefix/dump_sys_attr.py
[779/1771] Generating nrniv_py3.10_python_check_sys_base_prefix/check_sys_attr.py
[780/1771] Generating nrniv_py3.10_python_check_sys_base_prefix/dump_sys_attr.py
[781/1771] Generating nrniv_py3.10_nrnpython_check_sys_base_prefix/check_sys_attr.hoc
[782/1771] Generating nrniv_py3.10_nrnpython_check_sys_base_prefix/dump_sys_attr.py
[783/1771] Generating nrniv_py3.10_python_check_sys_base_exec_prefix/check_sys_attr.py
[784/1771] Generating ../nrnoc/vclmp.cpp
Translating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/vclmp.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnoc/vclmp.cpp
Notice: VERBATIM blocks are not thread safe
Notice: LINEAR is not thread safe.
[785/1771] Generating nrniv_py3.10_python_check_sys_base_exec_prefix/dump_sys_attr.py
[786/1771] Generating nrniv_py3.10_nrnpython_check_sys_base_exec_prefix/check_sys_attr.hoc
[787/1771] Building CXX object external/nmodl/src/visitors/CMakeFiles/visitor.dir/sympy_solver_visitor.cpp.o
[788/1771] Linking CXX static library lib/libvisitor.a
[789/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/axis.cpp.o
[790/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/apwindow.cpp.o
[791/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/bndedval.cpp.o
[792/1771] Linking CXX static library lib/libcodegen.a
[793/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/cbwidget.cpp.o
[794/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/epsprint.cpp.o
[795/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/checkpnt.cpp.o
[796/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/fourier.cpp.o
[797/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/graphvec.cpp.o
[798/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/gifimage.cpp.o
[799/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/graph.cpp.o
[800/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/hocmark.cpp.o
[801/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/grmanip.cpp.o
[802/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/grglyph.cpp.o
[803/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/htlist.cpp.o
[804/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/idraw.cpp.o
[805/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ivocmain.cpp.o
[806/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ivocrand.cpp.o
[807/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/_nmodl.dir/pynmodl.cpp.o
[808/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/mlinedit.cpp.o
[809/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ivoc.cpp.o
[810/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/mymath.cpp.o
[811/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ivocvect.cpp.o
[812/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/oc2iv.cpp.o
[813/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/objcmd.cpp.o
[814/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocbrowsr.cpp.o
[815/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocbox.cpp.o
[816/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/matrix.cpp.o
[817/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocdeck.cpp.o
[818/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ochelp.cpp.o
[819/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocfile.cpp.o
[820/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/_nmodl.dir/pyast.cpp.o
[821/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocnoiv1.cpp.o
[822/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocobserv.cpp.o
[823/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/oclist.cpp.o
[824/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocpicker.cpp.o
[825/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/rect.cpp.o
[826/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/octimer.cpp.o
[827/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocpointer.cpp.o
[828/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/pwman.cpp.o
[829/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/rubband.cpp.o
[830/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/scene.cpp.o
[831/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocptrvector.cpp.o
[832/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/scenepic.cpp.o
[833/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/utility.cpp.o
[834/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/xyview.cpp.o
[835/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/symchoos.cpp.o
[836/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/xmenu.cpp.o
[837/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/field.cpp.o
[838/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/xdep.cpp.o
[839/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/strfun.cpp.o
[840/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/cvodestb.cpp.o
[841/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/cvtrset.cpp.o
[842/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/cvodeobj.cpp.o
[843/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/nrndaspk.cpp.o
[844/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/tqueue.cpp.o
[845/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbs.cpp.o
[846/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/occvode.cpp.o
[847/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbsdirect.cpp.o
[848/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbslocal.cpp.o
[849/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/backtrace_utils.cpp.o
[850/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbslsrv.cpp.o
[851/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbsrcli.cpp.o
[852/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbssrv.cpp.o
[853/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbslsrv2.cpp.o
[854/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/classreg.cpp.o
[855/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/_nmodl.dir/pysymtab.cpp.o
[856/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/cxprop.cpp.o
[857/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/finithnd.cpp.o
[858/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/bbsavestate.cpp.o
[859/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/geometry3d.cpp.o
[860/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/datapath.cpp.o
[861/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrncvode/netcvode.cpp.o
[862/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/glinerec.cpp.o
[863/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/hocmech.cpp.o
[864/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/impedanc.cpp.o
[865/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/kssingle.cpp.o
[866/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/linmod.cpp.o
[867/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/memory_usage.cpp.o
[868/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/linmod1.cpp.o
[869/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/matrixmap.cpp.o
[870/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/kschan.cpp.o
[871/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/ndatclas.cpp.o
[872/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrncore_write.cpp.o
[873/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nonlinz.cpp.o
[874/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrncore_write/data/datum_indices.cpp.o
[875/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/multisplit.cpp.o
[876/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/netpar.cpp.o
[877/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrncore_write/io/nrncore_io.cpp.o
[878/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrncore_write/data/cell_group.cpp.o
[879/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrncore_write/utils/nrncore_utils.cpp.o
[880/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrnmenu.cpp.o
[881/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrncore_write/callbacks/nrncore_callbacks.cpp.o
[882/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrnpy.cpp.o
[883/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrndae.cpp.o
[884/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nvector_nrnserial_ld.cpp.o
[885/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nrnste.cpp.o
[886/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nvector_nrnthread.cpp.o
[887/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nvector_nrnthread_ld.cpp.o
[888/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/ocjump.cpp.o
[889/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/ocbbs.cpp.o
[890/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/ppshape.cpp.o
[891/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/rotate3d.cpp.o
[892/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/shape.cpp.o
[893/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/prcellstate.cpp.o
[894/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/secbrows.cpp.o
[895/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/pysecname2sec.cpp.o
[896/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/shapeplt.cpp.o
[897/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/savstate.cpp.o
[898/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/partrans.cpp.o
[899/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/splitcell.cpp.o
[900/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/spaceplt.cpp.o
[901/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/symdir.cpp.o
[902/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/vrecord.cpp.o
[903/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/clamp.cpp.o
[904/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/capac.cpp.o
[905/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/fstim.cpp.o
[906/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/cabcode.cpp.o
[907/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/eion.cpp.o
[908/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/extcelln.cpp.o
[909/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/fadvance.cpp.o
[910/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/hocprax.cpp.o
[911/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/container.cpp.o
[912/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/membfunc.cpp.o
[913/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/ldifus.cpp.o
[914/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/nrnnemo.cpp.o
[915/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/memblist.cpp.o
[916/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/nrntimeout.cpp.o
[917/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/nrnversion.cpp.o
[918/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/passive0.cpp.o
[919/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/seclist.cpp.o
[920/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/psection.cpp.o
[921/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/point.cpp.o
[922/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/secref.cpp.o
[923/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/init.cpp.o
[924/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/synapse.cpp.o
[925/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/isaac64.cpp.o
[926/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/nrnisaac.cpp.o
[927/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/mcran4.cpp.o
[928/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/solve.cpp.o
[929/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/nrnran123.cpp.o
[930/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/audit.cpp.o
[931/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/axis.cpp.o
[932/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/debug.cpp.o
[933/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/code2.cpp.o
[934/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/multicore.cpp.o
[935/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/ftime.cpp.o
[936/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/fileio.cpp.o
[937/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/getsym.cpp.o
[938/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/functabl.cpp.o
[939/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/treeset.cpp.o
[940/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/hocusr.cpp.o
[941/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/hoc_init.cpp.o
[942/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/hoc.cpp.o
[943/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/list.cpp.o
[944/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/mswinprt.cpp.o
[945/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/ocerf.cpp.o
[946/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/math.cpp.o
[947/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/hoc_oop.cpp.o
[948/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/nonlin.cpp.o
[949/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/_nmodl.dir/pynode_0.cpp.o
[950/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/code.cpp.o
[951/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/plt.cpp.o
[952/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/plot.cpp.o
[953/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/regexp.cpp.o
[954/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/scoprand.cpp.o
[955/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/version.cpp.o
[956/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/settext.cpp.o
[957/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/x.cpp.o
[958/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/symbol.cpp.o
[959/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/oc/xred.cpp.o
[960/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/oc_generated/parse.cpp.o
[961/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/feature.cpp.o
[962/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/apcount.cpp.o
[963/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/expsyn.cpp.o
[964/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/exp2syn.cpp.o
[965/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/hh.cpp.o
[966/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/intfire1.cpp.o
[967/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/intfire2.cpp.o
[968/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/passive.cpp.o
[969/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/netstim.cpp.o
[970/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/intfire4.cpp.o
[971/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/oclmp.cpp.o
[972/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/ppmark.cpp.o
[973/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/pattern.cpp.o
[974/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/abort.cpp.o
[975/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/_nmodl.dir/pynode_1.cpp.o
[976/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/stim.cpp.o
[977/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/advance.cpp.o
[978/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/svclmp.cpp.o
[979/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/syn.cpp.o
[980/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/boundary.cpp.o
[981/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/crank.cpp.o
[982/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/f2cmisc.cpp.o
[983/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnoc/vclmp.cpp.o
[984/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/scoperf.cpp.o
[985/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/gauss.cpp.o
[986/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/exprand.cpp.o
[987/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/expfit.cpp.o
[988/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/factoria.cpp.o
[989/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/force.cpp.o
[990/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/harmonic.cpp.o
[991/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/getmem.cpp.o
[992/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/hyperbol.cpp.o
[993/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/invert.cpp.o
[994/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/legendre.cpp.o
[995/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/lag.cpp.o
[996/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/normrand.cpp.o
[997/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/perpulse.cpp.o
[998/1771] Building CXX object external/nmodl/src/pybind/CMakeFiles/_nmodl.dir/pyvisitor.cpp.o
[999/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/poisrand.cpp.o
[1000/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/poisson.cpp.o
[1001/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/perstep.cpp.o
[1002/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/pulse.cpp.o
[1003/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/ramp.cpp.o
[1004/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/revhyper.cpp.o
[1005/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/revsawto.cpp.o
[1006/1771] Linking CXX shared module lib/nmodl/_nmodl.cpython-310-darwin.so
ld: warning: -undefined dynamic_lookup may not work with chained fixups
[1007/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/praxis.cpp.o
[1008/1771] Linking CXX executable bin/nmodl
[1009/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/romberg.cpp.o
[1010/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/sawtooth.cpp.o
[1011/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/sigmoid.cpp.o
[1012/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/revsigmo.cpp.o
[1013/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/step.cpp.o
[1014/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/squarewa.cpp.o
[1015/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/spline.cpp.o
[1016/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvband.c.o
[1017/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sparse/bksub.cpp.o
[1018/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvbandpre.c.o
[1019/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sparse/lineq.cpp.o
[1020/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sparse/prmat.cpp.o
[1021/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/threshol.cpp.o
[1022/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvbbdpre.c.o
[1023/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sparse/subrows.cpp.o
[1024/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvdense.c.o
[1025/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvdiag.c.o
[1026/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvspgmr.c.o
[1027/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvodesio.c.o
[1028/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sparse/getelm.cpp.o
[1029/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/idaband.c.o
[1030/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/idabbdpre.c.o
[1031/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/scopmath/tridiag.cpp.o
[1032/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvodea.c.o
[1033/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/idadense.c.o
[1034/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/idaio.c.o
[1035/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/idaic.c.o
[1036/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/band.c.o
[1037/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/idaspgmr.c.o
[1038/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/dense.c.o
[1039/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/nvector.c.o
[1040/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/iterative.c.o
[1041/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/smalldense.c.o
[1042/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/spgmr.c.o
[1043/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/sundialsmath.c.o
[1044/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/nvector_serial.c.o
[1045/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/ida/ida.c.o
[1046/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/shared/nvector_parallel.c.o
[1047/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnmpi/nrnmpi.cpp.o
[1048/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnmpi/memory_usage.cpp.o
[1049/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/nvector_nrnparallel_ld.cpp.o
[1050/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnmpi/bbsmpipack.cpp.o
[1051/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnmpi/mpispike.cpp.o
[1052/1771] Building C object src/nrniv/CMakeFiles/nrniv_lib.dir/__/sundials/cvodes/cvodes.c.o
[1053/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/nrnpython.cpp.o
[1054/1771] Running nrnivmodl-core with internal mod files
WARNING: No mod files found in '/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/bin', compiling default ones only!
[INFO] Running: make -j4 -f /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/coreneuron/nrnivmodl_core_makefile ROOT=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build MECHLIB_SUFFIX=internal NMODL_BINARY=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/bin/nmodl MODS_PATH=arm64/corenrn/mod2c BUILD_TYPE=SHARED NRN_PRCELLSTATE=0
Default NMODL flags: 
diff: arm64/corenrn/mod2c/_mod_func.cpp: No such file or directory
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netstim.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/exp2syn.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hh.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/expsyn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Parsing Units
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/passive.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/pattern.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/stim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/svclmp.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [warning] :: CVode solver of icur in 64.20-30 replaced with cnexp solver
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => Binary creating arm64/special-core
[INFO] MOD files built successfully for CoreNEURON
[1055/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/nrnpy_p2h.cpp.o
[1056/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/grids.cpp.o
[1057/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/rxd_intracellular.cpp.o
[1058/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/nrnpy_nrn.cpp.o
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:54:15: warning: anonymous non-C-compatible type given name for linkage purposes by typedef declaration; add a tag name here [-Wnon-c-typedef-for-linkage]
typedef struct {
              ^
               NPyMechObj
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:58:72: note: type is not C-compatible due to this default member initializer
    neuron::container::non_owning_identifier_without_container prop_id_{};
                                                                       ^~
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:60:3: note: type is given name 'NPyMechObj' for linkage purposes by this typedef declaration
} NPyMechObj;
  ^
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:62:15: warning: anonymous non-C-compatible type given name for linkage purposes by typedef declaration; add a tag name here [-Wnon-c-typedef-for-linkage]
typedef struct {
              ^
               NPyMechOfSegIter
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:64:24: note: type is not C-compatible due to this default member initializer
    NPyMechObj* pymech_{};
                       ^~
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:65:3: note: type is given name 'NPyMechOfSegIter' for linkage purposes by this typedef declaration
} NPyMechOfSegIter;
  ^
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:67:15: warning: anonymous non-C-compatible type given name for linkage purposes by typedef declaration; add a tag name here [-Wnon-c-typedef-for-linkage]
typedef struct {
              ^
               NPyMechFunc
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:69:24: note: type is not C-compatible due to this default member initializer
    NPyMechObj* pymech_{};
                       ^~
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/src/nrnpython/nrnpy_nrn.cpp:71:3: note: type is given name 'NPyMechFunc' for linkage purposes by this typedef declaration
} NPyMechFunc;
  ^
3 warnings generated.
[1059/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/nrnpy_hoc.cpp.o
[1060/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/rxd_extracellular.cpp.o
[1061/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/rxd_vol.cpp.o
[1062/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/rxd_marching_cubes.cpp.o
[1063/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/rxd_llgramarea.cpp.o
[1064/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivos/listimpl.cpp.o
[1065/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivos/observe.cpp.o
[1066/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivos/resource.cpp.o
[1067/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/nrnpython/rxd.cpp.o
[1068/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivos/regexp.cpp.o
[1069/1771] Building CXX object src/nrniv/CMakeFiles/nrniv.dir/__/ivoc/nrnmain.cpp.o
[1070/1771] Building CXX object src/nrniv/CMakeFiles/nrniv.dir/__/oc/ockludge.cpp.o
[1071/1771] Building CXX object src/nrniv/CMakeFiles/nrniv.dir/__/oc/modlreg.cpp.o
[1072/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/basic.cpp.o
[1073/1771] Building CXX object src/nrniv/CMakeFiles/nrniv_lib.dir/__/ivoc/ocmatrix.cpp.o
[1074/1771] Linking CXX shared library lib/libnrniv.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
[1075/1771] Linking CXX executable bin/nrniv
[1076/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/container/container.cpp.o
[1077/1771] Generating inithoc.cpp
[1078/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/container/generic_data_handle.cpp.o
[1079/1771] Running utility command for hoc_module
INFO:root:setup.py called with:setup.py build --cmake-build-dir /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build --disable-rx3d --without-nrnpython --build-lib=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python build_ext --define=NRN_ASAN_ENABLED,USE_PYTHON,NRN_ENABLE_THREADS
INFO:root:Setting SDKROOT=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk
WARNING:root:You are building a wheel with a Python built for macOS >=12.0.0. Your wheel won't run on older versions, consider using an official Python build from python.org
WARNING:root:Setting MACOSX_DEPLOYMENT_TARGET=12.0
INFO:root:Extension common compile flags defaultdict(<class 'list'>, {'library_dirs': ['/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib'], 'libraries': ['nrniv'], 'language': 'c++'})
INFO:root:RX3D is DISABLED
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/lib/python3.10/site-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!

        ********************************************************************************
        Requirements should be satisfied by a PEP 517 installer.
        If you are using pip, you can try `pip install --use-pep517`.
        ********************************************************************************

!!
  dist.fetch_build_eggs(dist.setup_requires)
WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/lib/python3.10/site-packages/setuptools_scm/git.py:163: UserWarning: "/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn" is shallow and may cause errors
  warnings.warn(f'"{wd.path}" is shallow and may cause errors')
INFO:root:running build
INFO:root:running build_py
INFO:root:copying share/lib/python/neuron/hclass3.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/expect_hocerr.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/psection.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/config.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/units.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/sections.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/coreneuron.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/doc.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/gui.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:copying share/lib/python/neuron/nonvint_block_supervisor.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron
INFO:root:creating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/metadata.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/morphml.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/xml2nrn.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/neuroml.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/rdxml.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:copying share/lib/python/neuron/neuroml/biophysics.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/neuroml
INFO:root:creating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:copying share/lib/python/neuron/tests/_subclass.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:copying share/lib/python/neuron/tests/test_all.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:copying share/lib/python/neuron/tests/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:copying share/lib/python/neuron/tests/test_neuron.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:copying share/lib/python/neuron/tests/test_vector.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:copying share/lib/python/neuron/tests/test_rxd.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests
INFO:root:creating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests/utils
INFO:root:copying share/lib/python/neuron/tests/utils/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests/utils
INFO:root:copying share/lib/python/neuron/tests/utils/strtobool.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests/utils
INFO:root:copying share/lib/python/neuron/tests/utils/capture_stdout.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests/utils
INFO:root:copying share/lib/python/neuron/tests/utils/checkresult.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/tests/utils
INFO:root:creating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/rxdException.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/options.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/plugins.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/rxdsection.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/species.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/rxdmath.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/rate.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/region.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/multiCompartmentReaction.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/constants.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/dimension3.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/section1d.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/export.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/initializer.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/rangevar.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/geometry.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/rxd.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/generalizedReaction.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/nodelist.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/node.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/gui.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:copying share/lib/python/neuron/rxd/reaction.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/rxd
INFO:root:creating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/crxd
INFO:root:copying share/lib/python/neuron/crxd/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/crxd
INFO:root:creating /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:copying share/lib/python/neuron/gui2/setup_threejs.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:copying share/lib/python/neuron/gui2/config.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:copying share/lib/python/neuron/gui2/__init__.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:copying share/lib/python/neuron/gui2/rangevar.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:copying share/lib/python/neuron/gui2/plotshape.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:copying share/lib/python/neuron/gui2/utilities.py -> /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/gui2
INFO:root:running build_ext
INFO:root:==> Building Python extensions
INFO:root:building 'neuron.hoc' extension
INFO:root:/usr/bin/gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -fno-common -dynamic -DNDEBUG -g -fwrapv -O3 -Wall -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope -DNRN_ASAN_ENABLED=1 -DUSE_PYTHON=1 -DNRN_ENABLE_THREADS=1 -Isrc -Isrc/oc -Isrc/nrnpython -Isrc/nrnmpi -I/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src -I/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/oc -I/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/nrnpython -I/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/nrnmpi -I/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/include -I/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/include/python3.10 -c src/nrnpython/inithoc.cpp -o /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/nrnpython/inithoc.o -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope -std=c++17
INFO:root:/usr/bin/g++ -bundle -undefined dynamic_lookup -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX12.sdk -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope -Wl,-rpath,/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/14.0.0/lib/darwin -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/nrnpython/inithoc.o -L/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib -lnrniv -o /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python/neuron/hoc.cpython-310-darwin.so -fno-omit-frame-pointer -shared-libsan -fsanitize=address -fsanitize-address-use-after-scope -Wl,-rpath,/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/14.0.0/lib/darwin -Wl,-rpath,@loader_path/../../
ld: warning: -undefined dynamic_lookup may not work with chained fixups
INFO:root:running build_scripts
INFO:root:creating build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nrniv -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nrngui -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nmodl -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nrniv-core -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nrnpyenv.sh -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nrnivmodl-core -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/neurondemo -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/nrnivmodl -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/modlunit -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/idraw -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/sortspike -> build/scripts-3.10
INFO:root:copying and adjusting share/lib/python/scripts/mkthreadsafe -> build/scripts-3.10
INFO:root:changing mode of build/scripts-3.10/nrniv from 644 to 755
INFO:root:changing mode of build/scripts-3.10/nrngui from 644 to 755
INFO:root:changing mode of build/scripts-3.10/nmodl from 644 to 755
INFO:root:changing mode of build/scripts-3.10/nrniv-core from 644 to 755
INFO:root:changing mode of build/scripts-3.10/nrnpyenv.sh from 644 to 755
INFO:root:changing mode of build/scripts-3.10/nrnivmodl-core from 644 to 755
INFO:root:changing mode of build/scripts-3.10/neurondemo from 644 to 755
INFO:root:changing mode of build/scripts-3.10/nrnivmodl from 644 to 755
INFO:root:changing mode of build/scripts-3.10/modlunit from 644 to 755
INFO:root:changing mode of build/scripts-3.10/idraw from 644 to 755
INFO:root:changing mode of build/scripts-3.10/sortspike from 644 to 755
INFO:root:changing mode of build/scripts-3.10/mkthreadsafe from 644 to 755
[1080/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/container/mechanism.cpp.o
[1081/1771] Generating share/nrn/demo/release/arm64/special, share/nrn/demo/release/arm64/libnrnmech.dylib
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release
cfiles =
Mod files: "cabpump.mod" "cachan1.mod" "camchan.mod" "capump.mod" "invlfire.mod" "khhchan.mod" "nacaex.mod" "nachan.mod" "release.mod"

MODOBJS= ./cabpump.o ./cachan1.o ./camchan.o ./capump.o ./invlfire.o ./khhchan.o ./nacaex.o ./nachan.o ./release.o
 -> Compiling mod_func.cpp
 -> NMODL ../cabpump.mod
 -> NMODL ../cachan1.mod
 -> NMODL ../camchan.mod
Translating cabpump.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/cabpump.cpp
Translating cachan1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/cachan1.cpp
Translating camchan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/camchan.cpp
Notice: Assignment to the GLOBAL variable, "vol", is not thread safe
Thread Safe
Thread Safe
 -> NMODL ../capump.mod
 -> NMODL ../invlfire.mod
 -> NMODL ../khhchan.mod
Translating khhchan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/khhchan.cpp
Translating capump.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/capump.cpp
Thread Safe
Thread Safe
Translating invlfire.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/invlfire.cpp
Thread Safe
 -> NMODL ../nacaex.mod
 -> NMODL ../nachan.mod
 -> NMODL ../release.mod
Translating nacaex.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/nacaex.cpp
Thread Safe
Translating nachan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/nachan.cpp
Thread Safe
Translating release.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/nrn/demo/release/arm64/release.cpp
Thread Safe
 -> Compiling cabpump.cpp
 -> Compiling cachan1.cpp
 -> Compiling camchan.cpp
 -> Compiling capump.cpp
 -> Compiling invlfire.cpp
 -> Compiling khhchan.cpp
 -> Compiling nacaex.cpp
 -> Compiling nachan.cpp
 -> Compiling release.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1082/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/utils/enumerate.cpp.o
[1083/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/oc/hoc_interpreter.cpp.o
[1084/1771] Building CXX object test/coreneuron/unit/cmdline_interface/CMakeFiles/cmd_interface_test_bin.dir/test_cmdline_interface.cpp.o
[1085/1771] Linking CXX executable bin/cmd_interface_test_bin
[1086/1771] Generating nrnivmodl/8b70050800897334ac3dcf9bccbec23ce253950bb3247c96e6ab2f9c53f6288c/mcna.mod
[1087/1771] Building CXX object test/coreneuron/unit/interleave_info/CMakeFiles/interleave_info_bin.dir/check_constructors.cpp.o
[1088/1771] Building CXX object test/CMakeFiles/testneuron.dir/unit_tests/container/node.cpp.o
[1089/1771] Generating nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/follower.mod
[1090/1771] Generating nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/gap.mod
[1091/1771] Generating nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/name_clashes.mod
[1092/1771] Generating nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/unitstest.mod
[1093/1771] Linking CXX executable bin/interleave_info_bin
[1094/1771] Generating nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/version_macros.mod
[1095/1771] Generating nrnivmodl/7378b0d1010df9fb9d314452ba3c6ac85ab5bcd507940792ff794d6831e1b453/opaque_token.mod
[1096/1771] Generating nrnivmodl/7378b0d1010df9fb9d314452ba3c6ac85ab5bcd507940792ff794d6831e1b453/ptr.mod
[1097/1771] Building CXX object test/coreneuron/unit/alignment/CMakeFiles/alignment_test_bin.dir/alignment.cpp.o
[1098/1771] Linking CXX executable bin/alignment_test_bin
[1099/1771] Generating nrnivmodl/fb5fb42ddab2ff650e8e4e789eb94701174e41ce7edaa51ad58d4fd93f798b51/ppxsrc.mod
[1100/1771] Building CXX object test/CMakeFiles/nrn-benchmarks.dir/benchmarks/threads/test_multicore.cpp.o
[1101/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/argpass.mod
[1102/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cabpump.mod
[1103/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cachan.mod
[1104/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cacum.mod
[1105/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cacur.mod
[1106/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cadif.mod
[1107/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cadifusl.mod
[1108/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cagk.mod
[1109/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/cagkftab.mod
[1110/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/capmp.mod
[1111/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/expsynspine.mod
[1112/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/fh.mod
[1113/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/fit1.mod
[1114/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/gap.mod
[1115/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/hh1.mod
[1116/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/hhvect.mod
[1117/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/inatest.mod
[1118/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/ionleak.mod
[1119/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/nacum.mod
[1120/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/nacur.mod
[1121/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/nadifl.mod
[1122/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/nonlin.mod
[1123/1771] Building CXX object test/coreneuron/unit/queueing/CMakeFiles/queuing_test_bin.dir/test_queueing.cpp.o
[1124/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/obj_ex.mod
[1125/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/order.mod
[1126/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/passiv.mod
[1127/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/rchan.mod
[1128/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/standard.inc
[1129/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/stim1.mod
[1130/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/str.mod
[1131/1771] Linking CXX executable bin/queuing_test_bin
[1132/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/syn1.mod
[1133/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/synpre.mod
[1134/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/trivial.mod
[1135/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/tstdarray.mod
[1136/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/tstextrn.mod
[1137/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/tstpnt1.mod
[1138/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/tstpnt2.mod
[1139/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/tstvec.mod
[1140/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/vclmp1.mod
[1141/1771] Generating nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/vlag.mod
[1142/1771] Generating nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/atest.mod
[1143/1771] Generating nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/sdata.inc
[1144/1771] Generating nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/sdata.mod
[1145/1771] Generating nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/sdata_pp.mod
[1146/1771] Generating nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/sdata_ppts.mod
[1147/1771] Generating nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/sdata_ts.mod
[1148/1771] Building CXX object test/coreneuron/unit/lfp/CMakeFiles/lfp_test_bin.dir/lfp.cpp.o
[1149/1771] Linking CXX executable bin/lfp_test_bin
[1150/1771] Generating nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/follower.mod
[1151/1771] Generating nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/gap.mod
[1152/1771] Generating nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/name_clashes.mod
[1153/1771] Generating nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/unitstest.mod
[1154/1771] Building special[-core] for test group datahandle
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/7378b0d1010df9fb9d314452ba3c6ac85ab5bcd507940792ff794d6831e1b453
cfiles =
Mod files: "./opaque_token.mod" "./ptr.mod"

MODOBJS= ./opaque_token.o ./ptr.o
 -> Compiling mod_func.cpp
 -> NMODL .././opaque_token.mod
 -> NMODL .././ptr.mod
Translating opaque_token.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/7378b0d1010df9fb9d314452ba3c6ac85ab5bcd507940792ff794d6831e1b453/arm64/opaque_token.cpp
Notice: VERBATIM blocks are not thread safe
Translating ptr.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/7378b0d1010df9fb9d314452ba3c6ac85ab5bcd507940792ff794d6831e1b453/arm64/ptr.cpp
Notice: Use of POINTER is not thread safe.
 -> Compiling opaque_token.cpp
 -> Compiling ptr.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1155/1771] Generating nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/version_macros.mod
[1156/1771] Generating datahandle/datahandle_tests/test/datahandle/test_1.py
[1157/1771] Generating datahandle/datahandle_tests/test/datahandle/test_token.py
[1158/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/cadif.mod
[1159/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/disc.mod
[1160/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/fornetcon.mod
[1161/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/hhwatch.mod
[1162/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/k3st.mod
[1163/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/table.mod
[1164/1771] Generating nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/variabletypes.mod
[1165/1771] Building special[-core] for test group coverage_tests
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/fb5fb42ddab2ff650e8e4e789eb94701174e41ce7edaa51ad58d4fd93f798b51
cfiles =
Mod files: "./ppxsrc.mod"

MODOBJS= ./ppxsrc.o
 -> Compiling mod_func.cpp
 -> NMODL .././ppxsrc.mod
Translating ppxsrc.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/fb5fb42ddab2ff650e8e4e789eb94701174e41ce7edaa51ad58d4fd93f798b51/arm64/ppxsrc.cpp
Thread Safe
 -> Compiling ppxsrc.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1166/1771] Generating coverage_tests/cover_tests/test/cover/test_netcvode.json
[1167/1771] Generating coverage_tests/cover_tests/test/cover/test_netcvode.py
[1168/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/axial.inc
[1169/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/axial.mod
[1170/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/axial_pp.mod
[1171/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/bacur.mod
[1172/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/banocur.mod
[1173/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/fornetcon.mod
[1174/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/invlfire.mod
[1175/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/natrans.mod
[1176/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/netmove.mod
[1177/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/sample.mod
[1178/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/unitstest.mod
[1179/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/version_macros.mod
[1180/1771] Generating nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/watchrange.mod
[1181/1771] Building special[-core] for test group pytest
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/8b70050800897334ac3dcf9bccbec23ce253950bb3247c96e6ab2f9c53f6288c
cfiles =
Mod files: "./mcna.mod"

MODOBJS= ./mcna.o
 -> NMODL .././mcna.mod
 -> Compiling mod_func.cpp
Translating mcna.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/8b70050800897334ac3dcf9bccbec23ce253950bb3247c96e6ab2f9c53f6288c/arm64/mcna.cpp
Thread Safe
 -> Compiling mcna.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1182/1771] Generating pytest/basic_tests_py3.10/test/pytest/test_nrntest_thread.json
[1183/1771] Generating pytest/basic_tests_py3.10/test/pytest/test_nrntest_thread.py
[1184/1771] Generating nrniv_py3.10_nrnpython_check_sys_base_exec_prefix/dump_sys_attr.py
[1185/1771] Generating nrniv_py3.10_python_check_sys_stderr.encoding/check_sys_attr.py
[1186/1771] Generating nrniv_py3.10_python_check_sys_stderr.encoding/dump_sys_attr.py
[1187/1771] Generating nrniv_py3.10_nrnpython_check_sys_stderr.encoding/check_sys_attr.hoc
[1188/1771] Generating nrniv_py3.10_nrnpython_check_sys_stderr.encoding/dump_sys_attr.py
[1189/1771] Generating nrniv_py3.10_python_check_sys_stdin.encoding/check_sys_attr.py
[1190/1771] Generating nrniv_py3.10_python_check_sys_stdin.encoding/dump_sys_attr.py
[1191/1771] Generating nrniv_py3.10_nrnpython_check_sys_stdin.encoding/check_sys_attr.hoc
[1192/1771] Generating nrniv_py3.10_nrnpython_check_sys_stdin.encoding/dump_sys_attr.py
[1193/1771] Generating nrniv_py3.10_python_check_sys_stdout.encoding/check_sys_attr.py
[1194/1771] Generating nrniv_py3.10_python_check_sys_stdout.encoding/dump_sys_attr.py
[1195/1771] Generating nrniv_py3.10_nrnpython_check_sys_stdout.encoding/check_sys_attr.hoc
[1196/1771] Generating nrniv_py3.10_nrnpython_check_sys_stdout.encoding/dump_sys_attr.py
[1197/1771] Generating nrniv_pydef_python_check_sys_path/check_sys_attr.py
[1198/1771] Generating nrniv_pydef_python_check_sys_path/dump_sys_attr.py
[1199/1771] Generating nrniv_pydef_nrnpython_check_sys_path/check_sys_attr.hoc
[1200/1771] Generating nrniv_pydef_nrnpython_check_sys_path/dump_sys_attr.py
[1201/1771] Generating nrniv_pydef_python_check_sys_prefix/check_sys_attr.py
[1202/1771] Generating nrniv_pydef_python_check_sys_prefix/dump_sys_attr.py
[1203/1771] Generating nrniv_pydef_nrnpython_check_sys_prefix/check_sys_attr.hoc
[1204/1771] Generating nrniv_pydef_nrnpython_check_sys_prefix/dump_sys_attr.py
[1205/1771] Generating nrniv_pydef_python_check_sys_exec_prefix/check_sys_attr.py
[1206/1771] Generating nrniv_pydef_python_check_sys_exec_prefix/dump_sys_attr.py
[1207/1771] Generating nrniv_pydef_nrnpython_check_sys_exec_prefix/check_sys_attr.hoc
[1208/1771] Generating nrniv_pydef_nrnpython_check_sys_exec_prefix/dump_sys_attr.py
[1209/1771] Generating nrniv_pydef_python_check_sys_base_prefix/check_sys_attr.py
[1210/1771] Generating nrniv_pydef_python_check_sys_base_prefix/dump_sys_attr.py
[1211/1771] Generating nrniv_pydef_nrnpython_check_sys_base_prefix/check_sys_attr.hoc
[1212/1771] Generating nrniv_pydef_nrnpython_check_sys_base_prefix/dump_sys_attr.py
[1213/1771] Generating nrniv_pydef_python_check_sys_base_exec_prefix/check_sys_attr.py
[1214/1771] Generating nrniv_pydef_python_check_sys_base_exec_prefix/dump_sys_attr.py
[1215/1771] Generating nrniv_pydef_nrnpython_check_sys_base_exec_prefix/check_sys_attr.hoc
[1216/1771] Generating nrniv_pydef_nrnpython_check_sys_base_exec_prefix/dump_sys_attr.py
[1217/1771] Generating nrniv_pydef_python_check_sys_stderr.encoding/check_sys_attr.py
[1218/1771] Generating nrniv_pydef_python_check_sys_stderr.encoding/dump_sys_attr.py
[1219/1771] Generating nrniv_pydef_nrnpython_check_sys_stderr.encoding/check_sys_attr.hoc
[1220/1771] Generating nrniv_pydef_nrnpython_check_sys_stderr.encoding/dump_sys_attr.py
[1221/1771] Generating nrniv_pydef_python_check_sys_stdin.encoding/check_sys_attr.py
[1222/1771] Generating nrniv_pydef_python_check_sys_stdin.encoding/dump_sys_attr.py
[1223/1771] Generating nrniv_pydef_nrnpython_check_sys_stdin.encoding/check_sys_attr.hoc
[1224/1771] Generating nrniv_pydef_nrnpython_check_sys_stdin.encoding/dump_sys_attr.py
[1225/1771] Generating nrniv_pydef_python_check_sys_stdout.encoding/check_sys_attr.py
[1226/1771] Generating nrniv_pydef_python_check_sys_stdout.encoding/dump_sys_attr.py
[1227/1771] Generating nrniv_pydef_nrnpython_check_sys_stdout.encoding/check_sys_attr.hoc
[1228/1771] Generating nrniv_pydef_nrnpython_check_sys_stdout.encoding/dump_sys_attr.py
[1229/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Aradi_Ca.mod
[1230/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Aradi_CadepK.mod
[1231/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Aradi_KA.mod
[1232/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Aradi_KDRf.mod
[1233/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Aradi_KDRs.mod
[1234/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Aradi_Na.mod
[1235/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/CaBK.mod
[1236/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/DGC_M.mod
[1237/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/DGC_UK.mod
[1238/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/DGC_sAHP.mod
[1239/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/Gfluct3.mod
[1240/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/LcaMig.mod
[1241/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/SH_KIn.mod
[1242/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/SH_na8st.mod
[1243/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/bgka.mod
[1244/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/ccanl.mod
[1245/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/ggap.mod
[1246/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/gskch.mod
[1247/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/holdingi.mod
[1248/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/hyperde3.mod
[1249/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/ichan2.mod
[1250/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/iconc_Ca.mod
[1251/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/kcaPR.mod
[1252/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/na3n.mod
[1253/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/nca.mod
[1254/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/spines.mod
[1255/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/tca.mod
[1256/1771] Generating ../../nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/vecevent.mod
[1257/1771] Building CXX object test/CMakeFiles/testneuron.dir/common/catch2_main.cpp.o
[1258/1771] Linking CXX executable bin/test/testneuron
[1259/1771] Generating ../../compare_test_results.py
[1260/1771] Generating ../../nrnivmodl/a9c54b18e4b54351cb4fd3e79067cafa02da4514b4383a54de8ff121657615ff/halfgap.mod
[1261/1771] Building special[-core] for test group hoctests
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f
cfiles =
Mod files: "./atest.mod" "./sdata.mod" "./sdata_pp.mod" "./sdata_ppts.mod" "./sdata_ts.mod"

MODOBJS= ./atest.o ./sdata.o ./sdata_pp.o ./sdata_ppts.o ./sdata_ts.o
 -> Compiling mod_func.cpp
 -> NMODL .././atest.mod
 -> NMODL .././sdata.mod
 -> NMODL .././sdata_pp.mod
Translating sdata.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/arm64/sdata.cpp
Translating sdata_pp.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/arm64/sdata_pp.cpp
INCLUDEing sdata.inc
Notice: Use of POINTER is not thread safe.
INCLUDEing sdata.inc
Notice: Use of POINTER is not thread safe.
Notice: VERBATIM blocks are not thread safe
Notice: VERBATIM blocks are not thread safe
Translating atest.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/arm64/atest.cpp
Thread Safe
 -> NMODL .././sdata_ppts.mod
 -> NMODL .././sdata_ts.mod
 -> Compiling atest.cpp
Translating sdata_ppts.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/arm64/sdata_ppts.cpp
Translating sdata_ts.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/9dd02278b0e431bad340bd82da603803632bc7acfce27d1f6b829b5bd260004f/arm64/sdata_ts.cpp
INCLUDEing sdata.inc
INCLUDEing sdata.inc
Thread Safe
Thread Safe
 -> Compiling sdata.cpp
 -> Compiling sdata_pp.cpp
 -> Compiling sdata_ppts.cpp
 -> Compiling sdata_ts.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1262/1771] Generating hoctests/test_loadbal_hoc/expect_err.hoc
[1263/1771] Generating hoctests/test_loadbal_hoc/tests/test_loadbal.hoc
[1264/1771] Generating hoctests/perf1_hoc/expect_err.hoc
[1265/1771] Generating hoctests/perf1_hoc/vardimtests/perf1.hoc
[1266/1771] Generating hoctests/test1_hoc/expect_err.hoc
[1267/1771] Generating hoctests/test1_hoc/vardimtests/test1.hoc
[1268/1771] Generating hoctests/test2_hoc/expect_err.hoc
[1269/1771] Generating hoctests/test2_hoc/vardimtests/test2.hoc
[1270/1771] Generating hoctests/test3_hoc/expect_err.hoc
[1271/1771] Generating hoctests/test3_hoc/vardimtests/test3.hoc
[1272/1771] Generating hoctests/test4_hoc/expect_err.hoc
[1273/1771] Generating hoctests/test4_hoc/vardimtests/test4.hoc
[1274/1771] Generating hoctests/test5_hoc/expect_err.hoc
[1275/1771] Generating hoctests/test5_hoc/vardimtests/test5.hoc
[1276/1771] Generating hoctests/test6_hoc/expect_err.hoc
[1277/1771] Generating hoctests/test6_hoc/vardimtests/test6.hoc
[1278/1771] Generating hoctests/test7_hoc/expect_err.hoc
[1279/1771] Generating hoctests/test7_hoc/vardimtests/test7.hoc
[1280/1771] Generating hoctests/test8_hoc/expect_err.hoc
[1281/1771] Generating hoctests/test8_hoc/vardimtests/test8.hoc
[1282/1771] Generating hoctests/test9_hoc/expect_err.hoc
[1283/1771] Generating hoctests/test9_hoc/vardimtests/test9.hoc
[1284/1771] Generating hoctests/test_hocGUI2_py/tests/test_hocGUI2.py
[1285/1771] Generating hoctests/test_kschan_py/tests/test_kschan.json
[1286/1771] Generating hoctests/test_kschan_py/tests/test_kschan.py
[1287/1771] Generating hoctests/test_mechfunc_py/tests/test_mechfunc.py
[1288/1771] Generating hoctests/test_mode_py/tests/test_mode.py
[1289/1771] Generating hoctests/test_neurondemo_py/tests/test_neurondemo.json
[1290/1771] Generating hoctests/test_neurondemo_py/tests/test_neurondemo.py
[1291/1771] Generating hoctests/test_nrniv-launch_py/tests/test_nrniv-launch.py
[1292/1771] Generating hoctests/test_setdata_py/tests/test_setdata.py
[1293/1771] Generating hoctests/test_shape_py/tests/test_shape.py
[1294/1771] Generating hoctests/test_thread_partition_py/tests/test_thread_partition.py
[1295/1771] Generating hoctests/test1_py/vardimtests/test1.py
[1296/1771] Generating hoctests/test2_py/vardimtests/test2.py
[1297/1771] Generating hoctests/test9_py/vardimtests/test9.py
[1298/1771] Generating ../tests/ringtest/reference_data/spk1.100ms.std.ref
[1299/1771] Generating ../../nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/Gfluct3.mod
[1300/1771] Generating ../../nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/hhderiv.mod
[1301/1771] Generating ../../nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/hhkin.mod
[1302/1771] Generating ../../nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/hhwatch.mod
[1303/1771] Generating ../../nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/nacum.mod
[1304/1771] Generating ../../nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/vecevent.mod
[1305/1771] Building CXX object test/coreneuron/unit/solver/CMakeFiles/test-solver.dir/test_solver.cpp.o
[1306/1771] Linking CXX executable bin/test-solver
[1307/1771] Generating ../tests/testcorenrn/reference/out_bbcore.spk
[1308/1771] Generating ../tests/testcorenrn/reference/out_conc.spk
[1309/1771] Generating ../tests/testcorenrn/reference/out_deriv.spk
[1310/1771] Generating ../tests/testcorenrn/reference/out_gf.spk
[1311/1771] Generating ../tests/testcorenrn/reference/out_kin.spk
[1312/1771] Generating ../tests/testcorenrn/reference/out_patstim.spk
[1313/1771] Generating ../tests/testcorenrn/reference/out_vecplay.spk
[1314/1771] Generating ../tests/testcorenrn/reference/out_vecevent.spk
[1315/1771] Generating ../tests/testcorenrn/reference/out_watch.spk
[1316/1771] Generating ../tests/testcorenrn/reference/out_netstimdirect.spk
[1317/1771] Building special[-core] for test group parallel
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100
cfiles =
Mod files: "./follower.mod" "./gap.mod" "./name_clashes.mod" "./unitstest.mod" "./version_macros.mod"

MODOBJS= ./follower.o ./gap.o ./name_clashes.o ./unitstest.o ./version_macros.o
 -> NMODL .././follower.mod
 -> Compiling mod_func.cpp
 -> NMODL .././gap.mod
 -> NMODL .././name_clashes.mod
Translating follower.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/arm64/follower.cpp
Thread Safe
Translating name_clashes.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/arm64/name_clashes.cpp
Thread Safe
 -> NMODL .././unitstest.mod
 -> NMODL .././version_macros.mod
Translating gap.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/arm64/gap.cpp
Thread Safe
 -> Compiling follower.cpp
Translating unitstest.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/arm64/unitstest.cpp
Thread Safe
 -> Compiling gap.cpp
Translating version_macros.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/5b499c48b620b3f996279dafe88ff900a32797c8807f2acc88ebe24f2d04a100/arm64/version_macros.cpp
Thread Safe
 -> Compiling name_clashes.cpp
 -> Compiling unitstest.cpp
 -> Compiling version_macros.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1318/1771] Generating parallel/subworld/test/parallel_tests/test_subworld.py
[1319/1771] Generating parallel/partrans/test/pytest_coreneuron/test_partrans.py
[1320/1771] Generating parallel/netpar/test/pytest_coreneuron/test_hoc_po.py
[1321/1771] Generating parallel/netpar/test/pytest_coreneuron/test_netpar.py
[1322/1771] Generating parallel/bas/test/parallel_tests/test_bas.py
[1323/1771] Generating parallel/nrntest_fast/test/pytest_coreneuron/run_pytest.py
[1324/1771] Generating parallel/nrntest_fast/test/pytest_coreneuron/test_nrntest_fast.json
[1325/1771] Generating parallel/nrntest_fast/test/pytest_coreneuron/test_nrntest_fast.py
[1326/1771] Building special[-core] for test group nmodl_tests
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5
cfiles =
Mod files: "./cadif.mod" "./disc.mod" "./fornetcon.mod" "./hhwatch.mod" "./k3st.mod" "./table.mod" "./variabletypes.mod"

MODOBJS= ./cadif.o ./disc.o ./fornetcon.o ./hhwatch.o ./k3st.o ./table.o ./variabletypes.o
 -> Compiling mod_func.cpp
 -> NMODL .././cadif.mod
 -> NMODL .././disc.mod
 -> NMODL .././fornetcon.mod
Translating disc.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/disc.cpp
Notice: DISCRETE is not thread safe.
Notice: This mechanism cannot be used with CVODE
 -> NMODL .././hhwatch.mod
Translating fornetcon.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/fornetcon.cpp
Thread Safe
Translating cadif.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/cadif.cpp
Thread Safe
 -> NMODL .././k3st.mod
 -> NMODL .././table.mod
Translating hhwatch.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/hhwatch.cpp
Thread Safe
 -> NMODL .././variabletypes.mod
Translating table.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/table.cpp
Thread Safe
 -> Compiling cadif.cpp
Translating k3st.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/k3st.cpp
NEURON's CVode method ignores conservation
Thread Safe
 -> Compiling disc.cpp
Translating variabletypes.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/ae2c9b73c9a624bce358af1b0042b70ba7c70ce86d0fb0bf97de8ac420156de5/arm64/variabletypes.cpp
Thread Safe
 -> Compiling fornetcon.cpp
 -> Compiling hhwatch.cpp
 -> Compiling k3st.cpp
 -> Compiling table.cpp
 -> Compiling variabletypes.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1327/1771] Generating nmodl_tests/test_table/test/nmodl/test_table.py
[1328/1771] Generating nmodl_tests/test_disc/test/nmodl/test_disc.py
[1329/1771] Generating nmodl_tests/test_function_table/test/nmodl/test_function_table.py
[1330/1771] Generating nmodl_tests/test_kinetic/test/nmodl/test_kinetic.py
[1331/1771] Generating nmodl_tests_coreneuron/test_table_coreneuron_cpu/test/nmodl/test_table.py
[1332/1771] Generating nmodl_tests_coreneuron/test_disc_coreneuron_cpu/test/nmodl/test_disc.py
[1333/1771] Generating nmodl_tests_coreneuron/test_function_table_coreneuron_cpu/test/nmodl/test_function_table.py
[1334/1771] Generating nmodl_tests_coreneuron/test_kinetic_coreneuron_cpu/test/nmodl/test_kinetic.py
[1335/1771] Building special[-core] for test group pytest_coreneuron
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0
cfiles =
Mod files: "./follower.mod" "./gap.mod" "./name_clashes.mod" "./unitstest.mod" "./version_macros.mod"

MODOBJS= ./follower.o ./gap.o ./name_clashes.o ./unitstest.o ./version_macros.o
[INFO] Running: make -j4 -f /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/coreneuron/nrnivmodl_core_makefile ROOT=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build MODS_PATH=arm64/corenrn/mod2c BUILD_TYPE=SHARED NRN_PRCELLSTATE=0
Default NMODL flags: 
diff: arm64/corenrn/mod2c/_mod_func.cpp: No such file or directory
[NMODL] [info] :: Processing arm64/corenrn/mod2c/exp2syn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/expsyn.mod
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/follower.mod
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/gap.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netstim.mod
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hh.mod
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Processing arm64/corenrn/mod2c/name_clashes.mod
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/passive.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/pattern.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/stim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/svclmp.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [warning] :: CVode solver of icur in 64.20-30 replaced with cnexp solver
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/unitstest.mod
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/version_macros.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => Binary creating arm64/special-core
[INFO] MOD files built successfully for CoreNEURON
 -> Compiling mod_func.cpp
 -> NMODL .././follower.mod
 -> NMODL .././gap.mod
 -> NMODL .././name_clashes.mod
Translating follower.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/arm64/follower.cpp
Thread Safe
 -> NMODL .././unitstest.mod
Translating gap.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/arm64/gap.cpp
Translating name_clashes.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/arm64/name_clashes.cpp
Thread Safe
 -> NMODL .././version_macros.mod
Thread Safe
 -> Compiling follower.cpp
Translating unitstest.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/arm64/unitstest.cpp
Thread Safe
 -> Compiling gap.cpp
Translating version_macros.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/c448d279dd3b91940d228c42e4a7c280bafe100b4e840f9c938be979cceb8fe0/arm64/version_macros.cpp
Thread Safe
 -> Compiling name_clashes.cpp
 -> Compiling unitstest.cpp
 -> Compiling version_macros.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1336/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_a_neuronoptions.py
[1337/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/gui_pycallobject.py
[1338/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/run_pytest.py
[1339/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_basic.py
[1340/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_bbss.py
[1341/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_fast_imem.py
[1342/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_hoc_po.py
[1343/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_inheritance.py
[1344/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_loadbal.py
[1345/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_memory_usage.py
[1346/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_multigid.py
[1347/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_netpar.py
[1348/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_nrntest_fast.json
[1349/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_nlayer.py
[1350/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_nrnste.py
[1351/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_partrans.py
[1352/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_py2nrnstring.py
[1353/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_nrntest_fast.py
[1354/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_pycallobject.py
[1355/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_pyobj.py
[1356/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_swc.py
[1357/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_template_err.py
[1358/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_vector_api.py
[1359/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_zptrlist.py
[1360/1771] Generating pytest_coreneuron/basic_tests_py3.10/test/pytest_coreneuron/test_version_macros.py
[1361/1771] Building special[-core] for test group external_ringtest
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/a9c54b18e4b54351cb4fd3e79067cafa02da4514b4383a54de8ff121657615ff
cfiles =
Mod files: "./halfgap.mod"

MODOBJS= ./halfgap.o
[INFO] Running: make -j4 -f /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/coreneuron/nrnivmodl_core_makefile ROOT=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build MODS_PATH=arm64/corenrn/mod2c BUILD_TYPE=SHARED NRN_PRCELLSTATE=0
Default NMODL flags: 
diff: arm64/corenrn/mod2c/_mod_func.cpp: No such file or directory
[NMODL] [info] :: Processing arm64/corenrn/mod2c/exp2syn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/expsyn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/halfgap.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hh.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netstim.mod
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Processing arm64/corenrn/mod2c/passive.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/pattern.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/stim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/svclmp.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [warning] :: CVode solver of icur in 64.20-30 replaced with cnexp solver
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => Binary creating arm64/special-core
[INFO] MOD files built successfully for CoreNEURON
 -> Compiling mod_func.cpp
 -> NMODL .././halfgap.mod
Translating halfgap.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/a9c54b18e4b54351cb4fd3e79067cafa02da4514b4383a54de8ff121657615ff/arm64/halfgap.cpp
Thread Safe
 -> Compiling halfgap.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1362/1771] Generating ../../external_ringtest/neuron/cell.hoc
[1363/1771] Generating ../../external_ringtest/neuron/args.py
[1364/1771] Generating ../../external_ringtest/neuron/celluniform.hoc
[1365/1771] Generating ../../external_ringtest/neuron/commonutils.py
[1366/1771] Generating ../../external_ringtest/neuron/ranparm.py
[1367/1771] Generating ../../external_ringtest/neuron/ringtest.py
[1368/1771] Generating ../../external_ringtest/neuron/ring.py
[1369/1771] Generating ../../external_ringtest/neuron/ringuniform.py
[1370/1771] Generating ../../external_ringtest/neuron_mpi/args.py
[1371/1771] Generating ../../external_ringtest/neuron/settings.py
[1372/1771] Generating ../../external_ringtest/neuron_mpi/celluniform.hoc
[1373/1771] Generating ../../external_ringtest/neuron_mpi/cell.hoc
[1374/1771] Generating ../../external_ringtest/neuron_mpi/ranparm.py
[1375/1771] Generating ../../external_ringtest/neuron_mpi/commonutils.py
[1376/1771] Generating ../../external_ringtest/neuron_mpi/ring.py
[1377/1771] Generating ../../external_ringtest/neuron_mpi/ringuniform.py
[1378/1771] Generating ../../external_ringtest/neuron_mpi_python/args.py
[1379/1771] Generating ../../external_ringtest/neuron_mpi/ringtest.py
[1380/1771] Generating ../../external_ringtest/neuron_mpi/settings.py
[1381/1771] Generating ../../external_ringtest/neuron_mpi_python/cell.hoc
[1382/1771] Generating ../../external_ringtest/neuron_mpi_python/celluniform.hoc
[1383/1771] Generating ../../external_ringtest/neuron_mpi_python/commonutils.py
[1384/1771] Generating ../../external_ringtest/neuron_mpi_python/ranparm.py
[1385/1771] Generating ../../external_ringtest/neuron_mpi_python/ring.py
[1386/1771] Generating ../../external_ringtest/neuron_mpi_python/ringtest.py
[1387/1771] Generating ../../external_ringtest/neuron_mpi_python/ringuniform.py
[1388/1771] Generating ../../external_ringtest/neuron_mpi_python/settings.py
[1389/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/cell.hoc
[1390/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/args.py
[1391/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/ranparm.py
[1392/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/celluniform.hoc
[1393/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/commonutils.py
[1394/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/ringtest.py
[1395/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/ring.py
[1396/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/ringuniform.py
[1397/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline_saverestore/settings.py
[1398/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/args.py
[1399/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/cell.hoc
[1400/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/celluniform.hoc
[1401/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/commonutils.py
[1402/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/ranparm.py
[1403/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/ringtest.py
[1404/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/ring.py
[1405/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/settings.py
[1406/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi/ringuniform.py
[1407/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/cell.hoc
[1408/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/args.py
[1409/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/celluniform.hoc
[1410/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/ranparm.py
[1411/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/ring.py
[1412/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/commonutils.py
[1413/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/ringuniform.py
[1414/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/ringtest.py
[1415/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_python/settings.py
[1416/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/args.py
[1417/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/cell.hoc
[1418/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/celluniform.hoc
[1419/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/commonutils.py
[1420/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/ranparm.py
[1421/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/ring.py
[1422/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/settings.py
[1423/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/ringuniform.py
[1424/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_offline/ringtest.py
[1425/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/args.py
[1426/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/cell.hoc
[1427/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/celluniform.hoc
[1428/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/ranparm.py
[1429/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/ring.py
[1430/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/commonutils.py
[1431/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/ringtest.py
[1432/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/settings.py
[1433/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/cell.hoc
[1434/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads/ringuniform.py
[1435/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/args.py
[1436/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/celluniform.hoc
[1437/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/ring.py
[1438/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/ringuniform.py
[1439/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/commonutils.py
[1440/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/ringtest.py
[1441/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/ranparm.py
[1442/1771] Generating ../../external_ringtest/coreneuron_cpu_mpi_threads_python/settings.py
[1443/1771] Building special[-core] for test group testcorenrn_bbcore
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876
cfiles =
Mod files: "./Gfluct3.mod" "./hhderiv.mod" "./hhkin.mod" "./hhwatch.mod" "./nacum.mod" "./vecevent.mod"

MODOBJS= ./Gfluct3.o ./hhderiv.o ./hhkin.o ./hhwatch.o ./nacum.o ./vecevent.o
[INFO] Running: make -j4 -f /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/coreneuron/nrnivmodl_core_makefile ROOT=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build MODS_PATH=arm64/corenrn/mod2c BUILD_TYPE=SHARED NRN_PRCELLSTATE=0
Default NMODL flags: 
diff: arm64/corenrn/mod2c/_mod_func.cpp: No such file or directory
[NMODL] [info] :: Processing arm64/corenrn/mod2c/expsyn.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/exp2syn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Gfluct3.mod
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hh.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hhkin.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hhderiv.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Automatically enable sympy_analytic because it exists solver of type sparse
[NMODL] [info] :: Running sympy solve visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hhwatch.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/nacum.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netstim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Processing arm64/corenrn/mod2c/passive.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Parsing Units
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/pattern.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/stim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/vecevent.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/svclmp.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [warning] :: CVode solver of icur in 64.20-30 replaced with cnexp solver
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => Binary creating arm64/special-core
[INFO] MOD files built successfully for CoreNEURON
 -> Compiling mod_func.cpp
 -> NMODL .././Gfluct3.mod
 -> NMODL .././hhderiv.mod
 -> NMODL .././hhkin.mod
Translating hhkin.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/arm64/hhkin.cpp
Translating Gfluct3.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/arm64/Gfluct3.cpp
Thread Safe
Thread Safe
Translating hhderiv.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/arm64/hhderiv.cpp
Thread Safe
 -> NMODL .././hhwatch.mod
 -> NMODL .././nacum.mod
 -> NMODL .././vecevent.mod
Translating hhwatch.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/arm64/hhwatch.cpp
Thread Safe
Translating vecevent.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/arm64/vecevent.cpp
Thread Safe
Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it
only affects and is affected by discrete events. As such it is not
located in a section and is not associated with an integrator
Translating nacum.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b62f97c7d3f6d905c774d64e10128b3300792f8f757b926b965c058a4d6ee876/arm64/nacum.cpp
Thread Safe
 -> Compiling Gfluct3.cpp
 -> Compiling hhderiv.cpp
 -> Compiling hhkin.cpp
 -> Compiling hhwatch.cpp
 -> Compiling nacum.cpp
 -> Compiling vecevent.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1444/1771] Generating ../../testcorenrn_bbcore/neuron/common.hoc
[1445/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_online/common.hoc
[1446/1771] Generating ../../testcorenrn_bbcore/neuron/defvar.hoc
[1447/1771] Generating ../../testcorenrn_bbcore/neuron/testbbcore.hoc
[1448/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_online/defvar.hoc
[1449/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_online/testbbcore.hoc
[1450/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1451/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_online_psolve_alternate/common.hoc
[1452/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_online_psolve_alternate/testbbcore.hoc
[1453/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_offline/defvar.hoc
[1454/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_offline/common.hoc
[1455/1771] Generating ../../testcorenrn_bbcore/coreneuron_cpu_offline/testbbcore.hoc
[1456/1771] Generating ../../testcorenrn_conc/neuron/common.hoc
[1457/1771] Generating ../../testcorenrn_conc/neuron/defvar.hoc
[1458/1771] Generating ../../testcorenrn_conc/neuron/testconc.hoc
[1459/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_online/common.hoc
[1460/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_online/testconc.hoc
[1461/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_online/defvar.hoc
[1462/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_online_psolve_alternate/common.hoc
[1463/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_online_psolve_alternate/testconc.hoc
[1464/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_offline/common.hoc
[1465/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1466/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_offline/defvar.hoc
[1467/1771] Generating ../../testcorenrn_conc/coreneuron_cpu_offline/testconc.hoc
[1468/1771] Generating ../../testcorenrn_deriv/neuron/common.hoc
[1469/1771] Generating ../../testcorenrn_deriv/neuron/defvar.hoc
[1470/1771] Generating ../../testcorenrn_deriv/neuron/testderiv.hoc
[1471/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_online/defvar.hoc
[1472/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_online/common.hoc
[1473/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_online/testderiv.hoc
[1474/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_online_psolve_alternate/common.hoc
[1475/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_online_psolve_alternate/testderiv.hoc
[1476/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1477/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_offline/common.hoc
[1478/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_offline/defvar.hoc
[1479/1771] Generating ../../testcorenrn_deriv/coreneuron_cpu_offline/testderiv.hoc
[1480/1771] Generating ../../testcorenrn_gf/neuron/common.hoc
[1481/1771] Generating ../../testcorenrn_gf/neuron/defvar.hoc
[1482/1771] Generating ../../testcorenrn_gf/neuron/testgf.hoc
[1483/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_online/common.hoc
[1484/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_online/testgf.hoc
[1485/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_online/defvar.hoc
[1486/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_online_psolve_alternate/common.hoc
[1487/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1488/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_online_psolve_alternate/testgf.hoc
[1489/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_offline/common.hoc
[1490/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_offline/testgf.hoc
[1491/1771] Generating ../../testcorenrn_gf/coreneuron_cpu_offline/defvar.hoc
[1492/1771] Generating ../../testcorenrn_kin/neuron/common.hoc
[1493/1771] Generating ../../testcorenrn_kin/neuron/defvar.hoc
[1494/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_online/testkin.hoc
[1495/1771] Generating ../../testcorenrn_kin/neuron/testkin.hoc
[1496/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_online/common.hoc
[1497/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_online_psolve_alternate/common.hoc
[1498/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_online/defvar.hoc
[1499/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_online_psolve_alternate/testkin.hoc
[1500/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1501/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_offline/common.hoc
[1502/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_offline/defvar.hoc
[1503/1771] Generating ../../testcorenrn_patstim/neuron/common.hoc
[1504/1771] Generating ../../testcorenrn_kin/coreneuron_cpu_offline/testkin.hoc
[1505/1771] Generating ../../testcorenrn_patstim/neuron/defvar.hoc
[1506/1771] Generating ../../testcorenrn_patstim/neuron/testpatstim.hoc
[1507/1771] Generating ../../testcorenrn_patstim/coreneuron_cpu_offline_saverestore/common.hoc
[1508/1771] Generating ../../testcorenrn_patstim/coreneuron_cpu_offline_saverestore/defvar.hoc
[1509/1771] Generating ../../testcorenrn_patstim/coreneuron_cpu_offline_saverestore/testpatstim.hoc
[1510/1771] Generating ../../testcorenrn_patstim/coreneuron_cpu_offline/common.hoc
[1511/1771] Generating ../../testcorenrn_patstim/coreneuron_cpu_offline/defvar.hoc
[1512/1771] Generating ../../testcorenrn_patstim/coreneuron_cpu_offline/testpatstim.hoc
[1513/1771] Generating ../../testcorenrn_vecplay/neuron/common.hoc
[1514/1771] Generating ../../testcorenrn_vecplay/neuron/defvar.hoc
[1515/1771] Generating ../../testcorenrn_vecplay/neuron/testvecplay.hoc
[1516/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_online/common.hoc
[1517/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_online/testvecplay.hoc
[1518/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_online/defvar.hoc
[1519/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_online_psolve_alternate/common.hoc
[1520/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1521/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_online_psolve_alternate/testvecplay.hoc
[1522/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_offline/common.hoc
[1523/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_offline/defvar.hoc
[1524/1771] Generating ../../testcorenrn_vecplay/coreneuron_cpu_offline/testvecplay.hoc
[1525/1771] Generating ../../testcorenrn_vecevent/neuron/common.hoc
[1526/1771] Generating ../../testcorenrn_vecevent/neuron/defvar.hoc
[1527/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_online_psolve_alternate/common.hoc
[1528/1771] Generating ../../testcorenrn_vecevent/neuron/testvecevent.hoc
[1529/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_online/common.hoc
[1530/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_online/defvar.hoc
[1531/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_online/testvecevent.hoc
[1532/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1533/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_offline/defvar.hoc
[1534/1771] Generating ../../testcorenrn_watch/neuron/common.hoc
[1535/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_online_psolve_alternate/testvecevent.hoc
[1536/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_offline/testvecevent.hoc
[1537/1771] Generating ../../testcorenrn_vecevent/coreneuron_cpu_offline/common.hoc
[1538/1771] Generating ../../testcorenrn_watch/neuron/defvar.hoc
[1539/1771] Generating ../../testcorenrn_watch/neuron/testwatch.hoc
[1540/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_online/common.hoc
[1541/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_online/testwatch.hoc
[1542/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_online/defvar.hoc
[1543/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_online_psolve_alternate/common.hoc
[1544/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_online_psolve_alternate/testwatch.hoc
[1545/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_online_psolve_alternate/defvar.hoc
[1546/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_offline/common.hoc
[1547/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_offline/defvar.hoc
[1548/1771] Generating ../../testcorenrn_watch/coreneuron_cpu_offline/testwatch.hoc
[1549/1771] Generating ../../testcorenrn_netstimdirect/direct_netstimdirect/common.hoc
[1550/1771] Generating ../../testcorenrn_netstimdirect/direct_netstimdirect/defvar.hoc
[1551/1771] Generating ../../testcorenrn_netstimdirect/direct_netstimdirect/testnetstimdirect.hoc
[1552/1771] Generating ../../testcorenrn_netstimdirect/direct_netstimdirect_psolve_alternate/common.hoc
[1553/1771] Generating ../../testcorenrn_netstimdirect/direct_netstimdirect_psolve_alternate/defvar.hoc
[1554/1771] Generating ../../testcorenrn_netstimdirect/direct_netstimdirect_psolve_alternate/testnetstimdirect.hoc
[1555/1771] Building special[-core] for test group coreneuron_modtests
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30
cfiles =
Mod files: "./axial.mod" "./axial_pp.mod" "./bacur.mod" "./banocur.mod" "./fornetcon.mod" "./invlfire.mod" "./natrans.mod" "./netmove.mod" "./sample.mod" "./unitstest.mod" "./version_macros.mod" "./watchrange.mod"

MODOBJS= ./axial.o ./axial_pp.o ./bacur.o ./banocur.o ./fornetcon.o ./invlfire.o ./natrans.o ./netmove.o ./sample.o ./unitstest.o ./version_macros.o ./watchrange.o
[INFO] Running: make -j4 -f /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/coreneuron/nrnivmodl_core_makefile ROOT=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build MODS_PATH=arm64/corenrn/mod2c BUILD_TYPE=SHARED NRN_PRCELLSTATE=0
Default NMODL flags: 
diff: arm64/corenrn/mod2c/_mod_func.cpp: No such file or directory
[NMODL] [info] :: Processing arm64/corenrn/mod2c/axial.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/axial_pp.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Processing arm64/corenrn/mod2c/bacur.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/banocur.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/exp2syn.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/expsyn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/fornetcon.mod
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: w [Argument] in ForNetcon shadows <argument> definition in NetReceiveBlock
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: w [Argument] in ForNetcon shadows <argument> definition in NetReceiveBlock
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: w [Argument] in ForNetcon shadows <argument> definition in NetReceiveBlock
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hh.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Processing arm64/corenrn/mod2c/invlfire.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netmove.mod
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/natrans.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netstim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/passive.mod
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/pattern.mod
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/sample.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/stim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/svclmp.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [warning] :: CVode solver of icur in 64.20-30 replaced with cnexp solver
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/unitstest.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/version_macros.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/watchrange.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => Binary creating arm64/special-core
[INFO] MOD files built successfully for CoreNEURON
 -> Compiling mod_func.cpp
 -> NMODL .././axial.mod
 -> NMODL .././axial_pp.mod
 -> NMODL .././bacur.mod
Translating axial.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/axial.cpp
INCLUDEing axial.inc
Thread Safe
Translating axial_pp.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/axial_pp.cpp
INCLUDEing axial.inc
Thread Safe
Translating bacur.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/bacur.cpp
Thread Safe
 -> NMODL .././banocur.mod
 -> NMODL .././fornetcon.mod
 -> NMODL .././invlfire.mod
Translating banocur.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/banocur.cpp
Notice: This mechanism cannot be used with CVODE
Translating fornetcon.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/fornetcon.cpp
Thread Safe
Thread Safe
Translating invlfire.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/invlfire.cpp
 -> NMODL .././natrans.mod
Thread Safe
 -> NMODL .././netmove.mod
 -> NMODL .././sample.mod
Translating natrans.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/natrans.cpp
Thread Safe
Translating netmove.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/netmove.cpp
Thread Safe
Translating sample.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/sample.cpp
Thread Safe
 -> NMODL .././unitstest.mod
 -> NMODL .././version_macros.mod
 -> NMODL .././watchrange.mod
Translating unitstest.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/unitstest.cpp
Thread Safe
 -> Compiling axial.cpp
Translating watchrange.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/watchrange.cpp
Translating version_macros.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/b23116150a9073cba36948776db2dbb9b3e2cc88ca30088010945f6636148b30/arm64/version_macros.cpp
Thread Safe
Thread Safe
 -> Compiling axial_pp.cpp
 -> Compiling bacur.cpp
 -> Compiling banocur.cpp
 -> Compiling fornetcon.cpp
 -> Compiling invlfire.cpp
 -> Compiling natrans.cpp
 -> Compiling netmove.cpp
 -> Compiling sample.cpp
 -> Compiling unitstest.cpp
 -> Compiling version_macros.cpp
 -> Compiling watchrange.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1556/1771] Generating coreneuron_modtests/inputpresyn_py/test/coreneuron/test_inputpresyn.py
[1557/1771] Generating coreneuron_modtests/fornetcon_py_cpu/test/coreneuron/test_fornetcon.py
[1558/1771] Generating coreneuron_modtests/version_macros/test/pytest_coreneuron/test_version_macros.py
[1559/1771] Generating coreneuron_modtests/direct_hoc_cpu/test/coreneuron/test_direct.hoc
[1560/1771] Generating coreneuron_modtests/direct_py_cpu/test/coreneuron/test_direct.py
[1561/1771] Generating coreneuron_modtests/spikes_py_cpu/test/coreneuron/test_spikes.py
[1562/1771] Generating coreneuron_modtests/spikes_file_mode_py_cpu/test/coreneuron/test_spikes.py
[1563/1771] Generating coreneuron_modtests/fast_imem_py_cpu/test/pytest_coreneuron/test_fast_imem.py
[1564/1771] Generating coreneuron_modtests/datareturn_py_cpu/test/coreneuron/test_datareturn.py
[1565/1771] Generating coreneuron_modtests/test_units_py_cpu/test/coreneuron/test_units.py
[1566/1771] Generating coreneuron_modtests/test_netmove_py_cpu/test/coreneuron/test_netmove.py
[1567/1771] Generating coreneuron_modtests/test_psolve_py_cpu/test/coreneuron/test_psolve.py
[1568/1771] Generating coreneuron_modtests/test_pointer_py_cpu/test/coreneuron/test_pointer.py
[1569/1771] Generating coreneuron_modtests/test_watchrange_py_cpu/test/coreneuron/test_watchrange.py
[1570/1771] Generating coreneuron_modtests/test_natrans_py_cpu/test/gjtests/test_natrans.py
[1571/1771] Generating coreneuron_modtests/test_ba_py_cpu/test/coreneuron/test_ba.py
[1572/1771] Generating coreneuron_modtests/test_subworlds_py_cpu/test/coreneuron/test_subworlds.py
[1573/1771] Generating coreneuron_modtests/spikes_mpi_file_mode_py_cpu/test/coreneuron/test_spikes.py
[1574/1771] Building CXX object test/CMakeFiles/nrn-benchmarks.dir/common/catch2_main.cpp.o
[1575/1771] Building special[-core] for test group example_nmodl
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2
cfiles =
Mod files: "./argpass.mod" "./cabpump.mod" "./cachan.mod" "./cacum.mod" "./cacur.mod" "./cadif.mod" "./cadifusl.mod" "./cagk.mod" "./cagkftab.mod" "./capmp.mod" "./expsynspine.mod" "./fh.mod" "./fit1.mod" "./gap.mod" "./hh1.mod" "./hhvect.mod" "./inatest.mod" "./ionleak.mod" "./nacum.mod" "./nacur.mod" "./nadifl.mod" "./nonlin.mod" "./obj_ex.mod" "./order.mod" "./passiv.mod" "./rchan.mod" "./stim1.mod" "./str.mod" "./syn1.mod" "./synpre.mod" "./trivial.mod" "./tstdarray.mod" "./tstextrn.mod" "./tstpnt1.mod" "./tstpnt2.mod" "./tstvec.mod" "./vclmp1.mod" "./vlag.mod"

MODOBJS= ./argpass.o ./cabpump.o ./cachan.o ./cacum.o ./cacur.o ./cadif.o ./cadifusl.o ./cagk.o ./cagkftab.o ./capmp.o ./expsynspine.o ./fh.o ./fit1.o ./gap.o ./hh1.o ./hhvect.o ./inatest.o ./ionleak.o ./nacum.o ./nacur.o ./nadifl.o ./nonlin.o ./obj_ex.o ./order.o ./passiv.o ./rchan.o ./stim1.o ./str.o ./syn1.o ./synpre.o ./trivial.o ./tstdarray.o ./tstextrn.o ./tstpnt1.o ./tstpnt2.o ./tstvec.o ./vclmp1.o ./vlag.o
 -> Compiling mod_func.cpp
 -> NMODL .././argpass.mod
 -> NMODL .././cabpump.mod
 -> NMODL .././cachan.mod
Translating argpass.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/argpass.cpp
Notice: VERBATIM blocks are not thread safe
Translating cabpump.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cabpump.cpp
Notice: Assignment to the GLOBAL variable, "vol", is not thread safe
Translating cachan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cachan.cpp
Thread Safe
 -> NMODL .././cacum.mod
 -> NMODL .././cacur.mod
 -> NMODL .././cadif.mod
Translating cacum.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cacum.cpp
Thread Safe
Translating cacur.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cacur.cpp
Thread Safe
Translating cadif.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cadif.cpp
Thread Safe
 -> NMODL .././cadifusl.mod
 -> NMODL .././cagk.mod
 -> NMODL .././cagkftab.mod
Translating cadifusl.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cadifusl.cpp
Notice: Assignment to the GLOBAL variable, "vol", is not thread safe
Translating cagk.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cagk.cpp
Thread Safe
Translating cagkftab.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/cagkftab.cpp
Thread Safe
 -> NMODL .././capmp.mod
 -> NMODL .././expsynspine.mod
 -> NMODL .././fh.mod
Translating expsynspine.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/expsynspine.cpp
Notice: LINEAR is not thread safe.
Translating fh.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/fh.cpp
INCLUDEing standard.inc
Translating capmp.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/capmp.cpp
Notice: Assignment to the GLOBAL variable, "inf", is not thread safe
Notice: Assignment to the GLOBAL variable, "tau", is not thread safe
NEURON's CVode method ignores conservation
Thread Safe
 -> NMODL .././fit1.mod
 -> NMODL .././hh1.mod
 -> NMODL .././gap.mod
Translating fit1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/fit1.cpp
Notice: VERBATIM blocks are not thread safe
Translating hh1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/hh1.cpp
Notice: This mechanism cannot be used with CVODE
Notice: Assignment to the GLOBAL variable, "hexp", is not thread safe
Notice: Assignment to the GLOBAL variable, "hinf", is not thread safe
Notice: Assignment to the GLOBAL variable, "mexp", is not thread safe
Notice: Assignment to the GLOBAL variable, "minf", is not thread safe
Notice: Assignment to the GLOBAL variable, "nexp", is not thread safe
Notice: Assignment to the GLOBAL variable, "ninf", is not thread safe
Warning: Default 6.3 of PARAMETER celsius will be ignored and set by NEURON.
Warning: Default -77.5 of PARAMETER ek will be ignored and set by NEURON.
Warning: Default 50 of PARAMETER ena will be ignored and set by NEURON.
Translating gap.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/gap.cpp
Notice: Use of POINTER is not thread safe.
 -> NMODL .././hhvect.mod
 -> NMODL .././inatest.mod
 -> NMODL .././ionleak.mod
Translating hhvect.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/hhvect.cpp
Notice: This mechanism cannot be used with CVODE
Thread Safe
Warning: Default 6.3 of PARAMETER celsius will be ignored and set by NEURON.
Warning: Default -77.5 of PARAMETER ek will be ignored and set by NEURON.
Warning: Default 50 of PARAMETER ena will be ignored and set by NEURON.
Translating inatest.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/inatest.cpp
Thread Safe
Translating ionleak.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/ionleak.cpp
Thread Safe
 -> NMODL .././nacum.mod
 -> NMODL .././nacur.mod
 -> NMODL .././nadifl.mod
Translating nacur.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/nacur.cpp
Translating nacum.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/nacum.cpp
Thread Safe
Thread Safe
 -> NMODL .././nonlin.mod
 -> NMODL .././obj_ex.mod
Translating nadifl.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/nadifl.cpp
Thread Safe
 -> NMODL .././order.mod
Translating obj_ex.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/obj_ex.cpp
Thread Safe
Translating nonlin.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/nonlin.cpp
Notice: NONLINEAR is not thread safe.
Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it
only affects and is affected by discrete events. As such it is not
located in a section and is not associated with an integrator
 -> NMODL .././passiv.mod
 -> NMODL .././rchan.mod
Translating order.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/order.cpp
Thread Safe
 -> NMODL .././stim1.mod
Translating passiv.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/passiv.cpp
Thread Safe
Translating rchan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/rchan.cpp
Notice: normrand is not thread safe
Notice: This mechanism cannot be used with CVODE
 -> NMODL .././str.mod
 -> NMODL .././syn1.mod
Translating stim1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/stim1.cpp
Thread Safe
 -> NMODL .././synpre.mod
 -> NMODL .././trivial.mod
Translating str.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/str.cpp
Notice: VERBATIM blocks are not thread safe
 -> NMODL .././tstdarray.mod
Translating syn1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/syn1.cpp
Thread Safe
 -> NMODL .././tstextrn.mod
Translating trivial.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/trivial.cpp
 -> NMODL .././tstpnt1.mod
Translating synpre.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/synpre.cpp
Notice: Use of POINTER is not thread safe.
Notice: VERBATIM blocks are not thread safe
Notice: This mechanism cannot be used with CVODE
 -> NMODL .././tstpnt2.mod
Translating tstdarray.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/tstdarray.cpp
Thread Safe
Translating tstextrn.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/tstextrn.cpp
Notice: Use of EXTERNAL is not thread safe.
 -> NMODL .././tstvec.mod
Translating tstpnt1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/tstpnt1.cpp
Notice: Use of POINTER is not thread safe.
 -> NMODL .././vclmp1.mod
 -> NMODL .././vlag.mod
Translating tstpnt2.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/tstpnt2.cpp
Notice: Use of POINTER is not thread safe.
Translating vclmp1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/vclmp1.cpp
Notice: VERBATIM blocks are not thread safe
Notice: This mechanism cannot be used with CVODE
Notice: LINEAR is not thread safe.
Translating tstvec.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/tstvec.cpp
Notice: VERBATIM blocks are not thread safe
 -> Compiling argpass.cpp
Translating vlag.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/263a5c542e063ee6760ce51af8be262e1c89db6e16b2211fb308c533e45334f2/arm64/vlag.cpp
 -> Compiling cabpump.cpp
 -> Compiling cachan.cpp
Thread Safe
 -> Compiling cacum.cpp
 -> Compiling cacur.cpp
 -> Compiling cadif.cpp
 -> Compiling cadifusl.cpp
 -> Compiling cagk.cpp
 -> Compiling cagkftab.cpp
 -> Compiling capmp.cpp
 -> Compiling expsynspine.cpp
 -> Compiling fh.cpp
 -> Compiling fit1.cpp
 -> Compiling gap.cpp
 -> Compiling hh1.cpp
 -> Compiling hhvect.cpp
 -> Compiling inatest.cpp
 -> Compiling ionleak.cpp
 -> Compiling nacum.cpp
 -> Compiling nacur.cpp
 -> Compiling nadifl.cpp
 -> Compiling nonlin.cpp
 -> Compiling obj_ex.cpp
 -> Compiling order.cpp
 -> Compiling passiv.cpp
 -> Compiling rchan.cpp
 -> Compiling stim1.cpp
 -> Compiling str.cpp
 -> Compiling syn1.cpp
 -> Compiling synpre.cpp
 -> Compiling trivial.cpp
 -> Compiling tstdarray.cpp
 -> Compiling tstextrn.cpp
 -> Compiling tstpnt1.cpp
 -> Compiling tstpnt2.cpp
 -> Compiling tstvec.cpp
 -> Compiling vclmp1.cpp
 -> Compiling vlag.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1576/1771] Generating example_nmodl/cabpump_hoc/cabpump.hoc
[1577/1771] Generating example_nmodl/ca_ap_hoc/ca_ap.hoc
[1578/1771] Generating example_nmodl/cachan_hoc/cachan.hoc
[1579/1771] Generating example_nmodl/cadif_hoc/cadif.hoc
[1580/1771] Generating example_nmodl/cadif_hoc/cadif.ses
[1581/1771] Generating example_nmodl/cadifusl_hoc/cadifusl.hoc
[1582/1771] Generating example_nmodl/cadifusl2_hoc/cadifusl2.hoc
[1583/1771] Generating example_nmodl/cadifusl1_hoc/cadifusl1.hoc
[1584/1771] Generating example_nmodl/cagk_hoc/cagk.hoc
[1585/1771] Generating example_nmodl/cv_hoc/cv.hoc
[1586/1771] Generating example_nmodl/capmp_hoc/capmp.hoc
[1587/1771] Generating example_nmodl/fit1_hoc/fit1.hoc
[1588/1771] Generating example_nmodl/fh_hoc/fh.hoc
[1589/1771] Generating example_nmodl/gap_hoc/gap.hoc
[1590/1771] Generating example_nmodl/hh1_hoc/hh1.hoc
[1591/1771] Generating example_nmodl/nacum_hoc/nacum.hoc
[1592/1771] Generating example_nmodl/nadifl1_hoc/nadifl1.hoc
[1593/1771] Generating example_nmodl/hhvect_hoc/hhvect.hoc
[1594/1771] Generating example_nmodl/nadifl1_hoc/nadifl1.ses
[1595/1771] Generating example_nmodl/nadifl2_hoc/nadifl2.ses
[1596/1771] Generating example_nmodl/nadifl2_hoc/nadifl2.hoc
[1597/1771] Generating example_nmodl/nadifl3_hoc/nadifl3.hoc
[1598/1771] Generating example_nmodl/nadifl4_hoc/nadifl4.hoc
[1599/1771] Generating example_nmodl/nadifl3_hoc/nadifl3.ses
[1600/1771] Generating example_nmodl/obj_ex_hoc/obj_ex.hoc
[1601/1771] Generating example_nmodl/order_hoc/order.hoc
[1602/1771] Generating example_nmodl/nadifl4_hoc/nadifl4.ses
[1603/1771] Generating example_nmodl/stim1_hoc/stim1.hoc
[1604/1771] Generating example_nmodl/passiv_hoc/passiv.hoc
[1605/1771] Generating example_nmodl/synpre_hoc/synpre.hoc
[1606/1771] Generating example_nmodl/syn1_hoc/syn1.hoc
[1607/1771] Generating example_nmodl/tstextrn_hoc/tstextrn.hoc
[1608/1771] Generating example_nmodl/tstpnt1_hoc/tstpnt1.hoc
[1609/1771] Linking CXX executable bin/test/nrn-benchmarks
[1610/1771] Generating example_nmodl/tstpnt2_hoc/tstpnt2.hoc
[1611/1771] Generating example_nmodl/tstvec_hoc/tstvec.hoc
[1612/1771] Generating example_nmodl/expsynspine_py/expsynspine.py
[1613/1771] Generating example_nmodl/cagkftab_py/cagkftab.py
[1614/1771] Generating example_nmodl/expsynspine_py/expsynspine.ses
[1615/1771] Generating example_nmodl/nonlin_py/nonlin.py
[1616/1771] Generating example_nmodl/tstpnt1_py/tstpnt1.py
[1617/1771] Generating example_nmodl/tstpnt2_py/tstpnt2.py
[1618/1771] Generating example_nmodl/vlag_py/vlag.py
[1619/1771] Building special[-core] for test group reduced_dentate
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead
cfiles =
Mod files: "./Aradi_Ca.mod" "./Aradi_CadepK.mod" "./Aradi_KA.mod" "./Aradi_KDRf.mod" "./Aradi_KDRs.mod" "./Aradi_Na.mod" "./CaBK.mod" "./DGC_M.mod" "./DGC_UK.mod" "./DGC_sAHP.mod" "./Gfluct3.mod" "./LcaMig.mod" "./SH_KIn.mod" "./SH_na8st.mod" "./bgka.mod" "./ccanl.mod" "./ggap.mod" "./gskch.mod" "./holdingi.mod" "./hyperde3.mod" "./ichan2.mod" "./iconc_Ca.mod" "./kcaPR.mod" "./na3n.mod" "./nca.mod" "./spines.mod" "./tca.mod" "./vecevent.mod"

MODOBJS= ./Aradi_Ca.o ./Aradi_CadepK.o ./Aradi_KA.o ./Aradi_KDRf.o ./Aradi_KDRs.o ./Aradi_Na.o ./CaBK.o ./DGC_M.o ./DGC_UK.o ./DGC_sAHP.o ./Gfluct3.o ./LcaMig.o ./SH_KIn.o ./SH_na8st.o ./bgka.o ./ccanl.o ./ggap.o ./gskch.o ./holdingi.o ./hyperde3.o ./ichan2.o ./iconc_Ca.o ./kcaPR.o ./na3n.o ./nca.o ./spines.o ./tca.o ./vecevent.o
[INFO] Running: make -j4 -f /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/share/coreneuron/nrnivmodl_core_makefile ROOT=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build MODS_PATH=arm64/corenrn/mod2c BUILD_TYPE=SHARED NRN_PRCELLSTATE=0
Default NMODL flags: 
diff: arm64/corenrn/mod2c/_mod_func.cpp: No such file or directory
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Aradi_Ca.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Aradi_CadepK.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Aradi_KA.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [warning] :: SYMTAB :: k [Argument] in exp1 shadows <ion> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [warning] :: SYMTAB :: k [Argument] in exp1 shadows <ion> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: k [Argument] in exp1 shadows <ion> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Aradi_KDRf.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Aradi_Na.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Aradi_KDRs.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/CaBK.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: k [Argument] in exp1 shadows <ion> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: k [Argument] in exp1 shadows <ion> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: k [Argument] in exp1 shadows <ion> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/DGC_UK.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/DGC_M.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/DGC_sAHP.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/Gfluct3.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/LcaMig.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: cai [Argument] in h2 shadows <assigned_definition read_ion> definition in NMODL_GLOBAL
[NMODL] [warning] :: SYMTAB :: celsius [Argument] in KTF shadows <assigned_definition extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: cai [Argument] in h2 shadows <assigned_definition read_ion> definition in NMODL_GLOBAL
[NMODL] [warning] :: SYMTAB :: celsius [Argument] in KTF shadows <assigned_definition extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: cai [Argument] in h2 shadows <assigned_definition read_ion> definition in NMODL_GLOBAL
[NMODL] [warning] :: SYMTAB :: celsius [Argument] in KTF shadows <assigned_definition extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [warning] :: Can not inline function call to mynormrand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/SH_KIn.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/SH_na8st.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/bgka.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/ccanl.mod
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Automatically enable sympy_analytic because it exists solver of type sparse
[NMODL] [info] :: Running sympy solve visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/exp2syn.mod
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/expsyn.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/ggap.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/gskch.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: cai [Argument] in rate shadows <assigned_definition> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: cai [Argument] in rate shadows <assigned_definition> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: cai [Argument] in rate shadows <assigned_definition> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hh.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/holdingi.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/hyperde3.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/iconc_Ca.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Processing arm64/corenrn/mod2c/ichan2.mod
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/kcaPR.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/na3n.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/nca.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/netstim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: t [Argument] in init_sequence shadows <extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [warning] :: Can not inline function call to erand
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/passive.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/pattern.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/spines.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/stim.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Processing arm64/corenrn/mod2c/svclmp.mod
[NMODL] [info] :: Processing arm64/corenrn/mod2c/tca.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [warning] :: CVode solver of icur in 64.20-30 replaced with cnexp solver
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: celsius [Argument] in KTF shadows <assigned_definition extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [warning] :: SYMTAB :: celsius [Argument] in KTF shadows <assigned_definition extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [warning] :: SYMTAB :: celsius [Argument] in KTF shadows <assigned_definition extern_neuron_var> definition in NMODL_GLOBAL
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Processing arm64/corenrn/mod2c/vecevent.mod
[NMODL] [info] :: Running symtab visitor
[NMODL] [info] :: Running semantic analysis visitor
[NMODL] [info] :: Running CVode to cnexp visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running code compatibility checker
[NMODL] [info] :: Running verbatim rename visitor
[NMODL] [info] :: Running KINETIC block visitor
[NMODL] [info] :: Running STEADYSTATE visitor
[NMODL] [info] :: Parsing Units
[NMODL] [info] :: Running nmodl inline visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running local variable rename visitor
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
[NMODL] [info] :: Running cnexp visitor
[NMODL] [info] :: Running C backend code generator
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => Binary creating arm64/special-core
[INFO] MOD files built successfully for CoreNEURON
 -> Compiling mod_func.cpp
 -> NMODL .././Aradi_Ca.mod
 -> NMODL .././Aradi_CadepK.mod
 -> NMODL .././Aradi_KA.mod
Translating Aradi_KA.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Aradi_KA.cpp
Thread Safe
Translating Aradi_Ca.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Aradi_Ca.cpp
Translating Aradi_CadepK.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Aradi_CadepK.cpp
Thread Safe
Thread Safe
 -> NMODL .././Aradi_KDRf.mod
 -> NMODL .././Aradi_KDRs.mod
 -> NMODL .././Aradi_Na.mod
Translating Aradi_KDRf.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Aradi_KDRf.cpp
Translating Aradi_KDRs.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Aradi_KDRs.cpp
Thread Safe
Thread Safe
Translating Aradi_Na.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Aradi_Na.cpp
Thread Safe
 -> NMODL .././CaBK.mod
 -> NMODL .././DGC_M.mod
 -> NMODL .././DGC_UK.mod
Translating CaBK.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/CaBK.cpp
Translating DGC_UK.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/DGC_UK.cpp
Thread Safe
Thread Safe
Translating DGC_M.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/DGC_M.cpp
Thread Safe
 -> NMODL .././Gfluct3.mod
 -> NMODL .././DGC_sAHP.mod
 -> NMODL .././LcaMig.mod
 -> NMODL .././SH_KIn.mod
Translating Gfluct3.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/Gfluct3.cpp
Translating DGC_sAHP.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/DGC_sAHP.cpp
Thread Safe
Thread Safe
Translating LcaMig.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/LcaMig.cpp
Thread Safe
 -> NMODL .././SH_na8st.mod
 -> NMODL .././bgka.mod
 -> NMODL .././ccanl.mod
Translating SH_KIn.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/SH_KIn.cpp
Thread Safe
 -> NMODL .././ggap.mod
Translating SH_na8st.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/SH_na8st.cpp
NEURON's CVode method ignores conservation
Thread Safe
Translating ccanl.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/ccanl.cpp
Translating bgka.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/bgka.cpp
Thread Safe
Thread Safe
 -> NMODL .././gskch.mod
 -> NMODL .././holdingi.mod
 -> NMODL .././hyperde3.mod
Translating ggap.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/ggap.cpp
Thread Safe
 -> NMODL .././ichan2.mod
Translating gskch.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/gskch.cpp
Thread Safe
Translating holdingi.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/holdingi.cpp
Thread Safe
Translating hyperde3.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/hyperde3.cpp
Thread Safe
 -> NMODL .././iconc_Ca.mod
 -> NMODL .././kcaPR.mod
 -> NMODL .././na3n.mod
Translating ichan2.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/ichan2.cpp
Thread Safe
Translating iconc_Ca.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/iconc_Ca.cpp
Thread Safe
Translating na3n.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/na3n.cpp
Thread Safe
 -> NMODL .././nca.mod
Translating kcaPR.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/kcaPR.cpp
Thread Safe
 -> NMODL .././spines.mod
 -> NMODL .././tca.mod
 -> NMODL .././vecevent.mod
Translating nca.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/nca.cpp
Thread Safe
Translating spines.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/spines.cpp
Thread Safe
Translating vecevent.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/vecevent.cpp
Thread Safe
Notice: ARTIFICIAL_CELL is a synonym for POINT_PROCESS which hints that it
only affects and is affected by discrete events. As such it is not
located in a section and is not associated with an integrator
Translating tca.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/test/nrnivmodl/53c432f7080fe7b786e16536f2d17f96d387425d200c645a6b4cec93b5edfead/arm64/tca.cpp
 -> Compiling Aradi_Ca.cpp
Thread Safe
 -> Compiling Aradi_CadepK.cpp
 -> Compiling Aradi_KA.cpp
 -> Compiling Aradi_KDRf.cpp
 -> Compiling Aradi_KDRs.cpp
 -> Compiling Aradi_Na.cpp
 -> Compiling CaBK.cpp
 -> Compiling DGC_M.cpp
 -> Compiling DGC_UK.cpp
 -> Compiling DGC_sAHP.cpp
 -> Compiling Gfluct3.cpp
 -> Compiling LcaMig.cpp
 -> Compiling SH_KIn.cpp
 -> Compiling SH_na8st.cpp
 -> Compiling bgka.cpp
 -> Compiling ccanl.cpp
 -> Compiling ggap.cpp
 -> Compiling gskch.cpp
 -> Compiling holdingi.cpp
 -> Compiling hyperde3.cpp
 -> Compiling ichan2.cpp
 -> Compiling iconc_Ca.cpp
 -> Compiling kcaPR.cpp
 -> Compiling na3n.cpp
 -> Compiling nca.cpp
 -> Compiling spines.cpp
 -> Compiling tca.cpp
 -> Compiling vecevent.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
[1620/1771] Generating ../../reduced_dentate/neuron/dat/DGC_dendrite_points.dat
[1621/1771] Generating ../../reduced_dentate/neuron/commonutils.py
[1622/1771] Generating ../../reduced_dentate/neuron/datasets/Control/AACstim.dat
[1623/1771] Generating ../../reduced_dentate/neuron/dat/DGC_dendrite_topology.dat
[1624/1771] Generating ../../reduced_dentate/neuron/datasets/Control/AACtoMC.dat
[1625/1771] Generating ../../reduced_dentate/neuron/dat/axon_st8.dat
[1626/1771] Generating ../../reduced_dentate/neuron/dat/soma_st8.dat
[1627/1771] Generating ../../reduced_dentate/neuron/datasets/Control/AAC.dat
[1628/1771] Generating ../../reduced_dentate/neuron/dat/DGC_spine_density.dat
[1629/1771] Generating ../../reduced_dentate/neuron/datasets/Control/AACtoGC.dat
[1630/1771] Generating ../../reduced_dentate/neuron/datasets/Control/BC.dat
[1631/1771] Generating ../../reduced_dentate/neuron/datasets/Control/BCstim.dat
[1632/1771] Generating ../../reduced_dentate/neuron/datasets/Control/BCtoGC.dat
[1633/1771] Generating ../../reduced_dentate/neuron/datasets/Control/BCtoBC.dat
[1634/1771] Generating ../../reduced_dentate/neuron/datasets/Control/GCstim.dat
[1635/1771] Generating ../../reduced_dentate/neuron/datasets/Control/BCtoMC.dat
[1636/1771] Generating ../../reduced_dentate/neuron/datasets/Control/GC.dat
[1637/1771] Generating ../../reduced_dentate/neuron/datasets/Control/HC.dat
[1638/1771] Generating ../../reduced_dentate/neuron/datasets/Control/GCtoAAC.dat
[1639/1771] Generating ../../reduced_dentate/neuron/datasets/Control/GCtoBC.dat
[1640/1771] Generating ../../reduced_dentate/neuron/datasets/Control/GCtoMC.dat
[1641/1771] Generating ../../reduced_dentate/neuron/datasets/Control/HCstim.dat
[1642/1771] Generating ../../reduced_dentate/neuron/datasets/Control/HCtoGC.dat
[1643/1771] Generating ../../reduced_dentate/neuron/datasets/Control/HCtoHC.dat
[1644/1771] Generating ../../reduced_dentate/neuron/datasets/Control/HCtoMC.dat
[1645/1771] Generating ../../reduced_dentate/neuron/datasets/Control/HCtoNGFC.dat
[1646/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MCstim.dat
[1647/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MC.dat
[1648/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MCtoGC.dat
[1649/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MCtoAAC.dat
[1650/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MCtoBC.dat
[1651/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MCtoHC.dat
[1652/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MPP.dat
[1653/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MCtoMC.dat
[1654/1771] Generating ../../reduced_dentate/neuron/datasets/Control/NGFCstim.dat
[1655/1771] Generating ../../reduced_dentate/neuron/datasets/Control/NGFCtoAAC.dat
[1656/1771] Generating ../../reduced_dentate/neuron/datasets/Control/NGFCtoBC.dat
[1657/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MPP/MPPspiketrain.dat
[1658/1771] Generating ../../reduced_dentate/neuron/datasets/Control/MPPtoGC.dat
[1659/1771] Generating ../../reduced_dentate/neuron/datasets/Control/NGFC.dat
[1660/1771] Generating ../../reduced_dentate/neuron/datasets/Control/NGFCtoNGFC.dat
[1661/1771] Generating ../../reduced_dentate/neuron/datasets/Control/celltypes.dat
[1662/1771] Generating ../../reduced_dentate/neuron/datasets/Control/gapjunctions.dat
[1663/1771] Generating ../../reduced_dentate/neuron/datasets/Control/gjHCtoHC.dat
[1664/1771] Generating ../../reduced_dentate/neuron/datasets/Control/gjBCtoBC.dat
[1665/1771] Generating ../../reduced_dentate/neuron/datasets/Control/NGFCtoGC.dat
[1666/1771] Generating ../../reduced_dentate/neuron/datasets/Control/connectivity.dat
[1667/1771] Generating ../../reduced_dentate/neuron/datasets/Control/gjNGFCtoNGFC.dat
[1668/1771] Generating ../../reduced_dentate/neuron/datasets/Control/syndend.dat
[1669/1771] Generating ../../reduced_dentate/neuron/datasets/Control/syncomp.dat
[1670/1771] Generating ../../reduced_dentate/neuron/datasets/Control/stim.dat
[1671/1771] Generating ../../reduced_dentate/neuron/datasets/Control/syndecay.dat
[1672/1771] Generating ../../reduced_dentate/neuron/datasets/Control/synweight.dat
[1673/1771] Generating ../../reduced_dentate/neuron/datasets/Control/synerev.dat
[1674/1771] Generating ../../reduced_dentate/neuron/datasets/Control/synrise.dat
[1675/1771] Generating ../../reduced_dentate/neuron/lib.hoc
[1676/1771] Generating ../../reduced_dentate/neuron/main.hoc
[1677/1771] Generating ../../reduced_dentate/neuron/parameters/Control.hoc
[1678/1771] Generating ../../reduced_dentate/neuron/run.hoc
[1679/1771] Generating ../../reduced_dentate/neuron/templates/BasketCell.hoc
[1680/1771] Generating ../../reduced_dentate/neuron/templates/AxoAxonicCell.hoc
[1681/1771] Generating ../../reduced_dentate/neuron/templates/DGC_Biophysics_passive_na8st.hoc
[1682/1771] Generating ../../reduced_dentate/neuron/templates/DGC.hoc
[1683/1771] Generating ../../reduced_dentate/neuron/templates/HICAPCell.hoc
[1684/1771] Generating ../../reduced_dentate/neuron/templates/DGC_Synapses.hoc
[1685/1771] Generating ../../reduced_dentate/neuron/templates/Dict.hoc
[1686/1771] Generating ../../reduced_dentate/neuron/templates/MPPCell.hoc
[1687/1771] Generating ../../reduced_dentate/neuron/templates/DGC_Morphology_from_file_na8st.hoc
[1688/1771] Generating ../../reduced_dentate/neuron/templates/DGC_Parameters_passive_na8st.hoc
[1689/1771] Generating ../../reduced_dentate/neuron/templates/HIPPCell.hoc
[1690/1771] Generating ../../reduced_dentate/neuron/templates/MossyCell.hoc
[1691/1771] Generating ../../reduced_dentate/neuron/templates/NGFCell.hoc
[1692/1771] Generating ../../reduced_dentate/neuron/templates/StimCell.hoc
[1693/1771] Generating ../../reduced_dentate/neuron/templates/Value.hoc
[1694/1771] Generating ../../reduced_dentate/coreneuron_cpu/commonutils.py
[1695/1771] Generating ../../reduced_dentate/neuron/templates/defvar.hoc
[1696/1771] Generating ../../reduced_dentate/coreneuron_cpu/dat/DGC_dendrite_topology.dat
[1697/1771] Generating ../../reduced_dentate/neuron/templates/ranstream.hoc
[1698/1771] Generating ../../reduced_dentate/coreneuron_cpu/dat/DGC_dendrite_points.dat
[1699/1771] Generating ../../reduced_dentate/coreneuron_cpu/dat/axon_st8.dat
[1700/1771] Generating ../../reduced_dentate/coreneuron_cpu/dat/soma_st8.dat
[1701/1771] Generating ../../reduced_dentate/coreneuron_cpu/dat/DGC_spine_density.dat
[1702/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/AACtoGC.dat
[1703/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/AAC.dat
[1704/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/AACstim.dat
[1705/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/AACtoMC.dat
[1706/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/BC.dat
[1707/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/BCstim.dat
[1708/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/BCtoGC.dat
[1709/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/BCtoMC.dat
[1710/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/GC.dat
[1711/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/GCstim.dat
[1712/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/BCtoBC.dat
[1713/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/GCtoAAC.dat
[1714/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/GCtoBC.dat
[1715/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/GCtoMC.dat
[1716/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/HC.dat
[1717/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/HCtoNGFC.dat
[1718/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/HCtoHC.dat
[1719/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/HCtoMC.dat
[1720/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/HCtoGC.dat
[1721/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MCstim.dat
[1722/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/HCstim.dat
[1723/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MCtoAAC.dat
[1724/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MC.dat
[1725/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MCtoHC.dat
[1726/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MCtoMC.dat
[1727/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MCtoBC.dat
[1728/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MPP.dat
[1729/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MPP/MPPspiketrain.dat
[1730/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MCtoGC.dat
[1731/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/NGFCtoAAC.dat
[1732/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/MPPtoGC.dat
[1733/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/NGFC.dat
[1734/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/NGFCtoBC.dat
[1735/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/NGFCstim.dat
[1736/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/NGFCtoNGFC.dat
[1737/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/NGFCtoGC.dat
[1738/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/gjNGFCtoNGFC.dat
[1739/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/celltypes.dat
[1740/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/connectivity.dat
[1741/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/gjHCtoHC.dat
[1742/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/gapjunctions.dat
[1743/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/gjBCtoBC.dat
[1744/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/stim.dat
[1745/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/syncomp.dat
[1746/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/synerev.dat
[1747/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/synrise.dat
[1748/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/syndecay.dat
[1749/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/syndend.dat
[1750/1771] Generating ../../reduced_dentate/coreneuron_cpu/datasets/Control/synweight.dat
[1751/1771] Generating ../../reduced_dentate/coreneuron_cpu/main.hoc
[1752/1771] Generating ../../reduced_dentate/coreneuron_cpu/lib.hoc
[1753/1771] Generating ../../reduced_dentate/coreneuron_cpu/parameters/Control.hoc
[1754/1771] Generating ../../reduced_dentate/coreneuron_cpu/run.hoc
[1755/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/BasketCell.hoc
[1756/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/AxoAxonicCell.hoc
[1757/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/DGC.hoc
[1758/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/DGC_Biophysics_passive_na8st.hoc
[1759/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/DGC_Parameters_passive_na8st.hoc
[1760/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/DGC_Morphology_from_file_na8st.hoc
[1761/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/Dict.hoc
[1762/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/DGC_Synapses.hoc
[1763/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/HICAPCell.hoc
[1764/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/HIPPCell.hoc
[1765/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/MPPCell.hoc
[1766/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/StimCell.hoc
[1767/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/Value.hoc
[1768/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/MossyCell.hoc
[1769/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/ranstream.hoc
[1770/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/NGFCell.hoc
[1771/1771] Generating ../../reduced_dentate/coreneuron_cpu/templates/defvar.hoc
$ ccache -vs 2>/dev/null
Cache directory:    /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/ccache
Config file:        /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/ccache/ccache.conf
System config file: /opt/homebrew/Cellar/ccache/4.7.2/etc/ccache.conf
Stats updated:      Fri Oct 20 23:41:52 2023
Cacheable calls:      510 /  510 (100.0%)
  Hits:                 0 /  510 ( 0.00%)
    Direct:             0
    Preprocessed:       0
  Misses:             510 /  510 (100.0%)
Successful lookups:
  Direct:               0 /  510 ( 0.00%)
  Preprocessed:         0 /  510 ( 0.00%)
Local storage:
  Cache size (GB):   1.51 / 5.00 (30.24%)
  Files:            10827
  Hits:                 0 /  510 ( 0.00%)
  Misses:             510 /  510 (100.0%)
  Reads:             1020
  Writes:             953
$ echo $'[install]\nprefix='>src/nrnpython/setup.cfg
$ cat src/nrnpython/setup.cfg
[install]
prefix=
$ ctest --output-on-failure
Test project /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build
        Start 217: external_ringtest::coreneuron_cpu_mpi_offline::preparation
        Start 225: testcorenrn_bbcore::coreneuron_cpu_offline::preparation
  1/276 Test #225: testcorenrn_bbcore::coreneuron_cpu_offline::preparation ..................   Passed    1.13 sec
        Start 231: testcorenrn_conc::coreneuron_cpu_offline::preparation
  2/276 Test #231: testcorenrn_conc::coreneuron_cpu_offline::preparation ....................   Passed    0.30 sec
        Start 237: testcorenrn_deriv::coreneuron_cpu_offline::preparation
  3/276 Test #237: testcorenrn_deriv::coreneuron_cpu_offline::preparation ...................   Passed    0.31 sec
        Start 249: testcorenrn_kin::coreneuron_cpu_offline::preparation
  4/276 Test #217: external_ringtest::coreneuron_cpu_mpi_offline::preparation ...............   Passed    1.78 sec
        Start 243: testcorenrn_gf::coreneuron_cpu_offline::preparation
  5/276 Test #249: testcorenrn_kin::coreneuron_cpu_offline::preparation .....................   Passed    0.32 sec
        Start 136: pyinit::nrniv_py3.10_python_check_sys_path::preparation
  6/276 Test #136: pyinit::nrniv_py3.10_python_check_sys_path::preparation ..................   Passed    0.02 sec
        Start 138: pyinit::nrniv_py3.10_nrnpython_check_sys_path::preparation
  7/276 Test #243: testcorenrn_gf::coreneuron_cpu_offline::preparation ......................   Passed    0.31 sec
        Start 254: testcorenrn_patstim::coreneuron_cpu_offline::preparation
  8/276 Test #138: pyinit::nrniv_py3.10_nrnpython_check_sys_path::preparation ...............   Passed    0.02 sec
        Start 140: pyinit::nrniv_py3.10_python_check_sys_prefix::preparation
  9/276 Test #140: pyinit::nrniv_py3.10_python_check_sys_prefix::preparation ................   Passed    0.02 sec
        Start 142: pyinit::nrniv_py3.10_nrnpython_check_sys_prefix::preparation
 10/276 Test #142: pyinit::nrniv_py3.10_nrnpython_check_sys_prefix::preparation .............   Passed    0.02 sec
        Start 144: pyinit::nrniv_py3.10_python_check_sys_exec_prefix::preparation
 11/276 Test #144: pyinit::nrniv_py3.10_python_check_sys_exec_prefix::preparation ...........   Passed    0.02 sec
        Start 146: pyinit::nrniv_py3.10_nrnpython_check_sys_exec_prefix::preparation
 12/276 Test #146: pyinit::nrniv_py3.10_nrnpython_check_sys_exec_prefix::preparation ........   Passed    0.02 sec
        Start 148: pyinit::nrniv_py3.10_python_check_sys_base_prefix::preparation
 13/276 Test #148: pyinit::nrniv_py3.10_python_check_sys_base_prefix::preparation ...........   Passed    0.02 sec
        Start 150: pyinit::nrniv_py3.10_nrnpython_check_sys_base_prefix::preparation
 14/276 Test #150: pyinit::nrniv_py3.10_nrnpython_check_sys_base_prefix::preparation ........   Passed    0.02 sec
        Start 152: pyinit::nrniv_py3.10_python_check_sys_base_exec_prefix::preparation
 15/276 Test #152: pyinit::nrniv_py3.10_python_check_sys_base_exec_prefix::preparation ......   Passed    0.02 sec
        Start 154: pyinit::nrniv_py3.10_nrnpython_check_sys_base_exec_prefix::preparation
 16/276 Test #154: pyinit::nrniv_py3.10_nrnpython_check_sys_base_exec_prefix::preparation ...   Passed    0.02 sec
        Start 156: pyinit::nrniv_py3.10_python_check_sys_stderr.encoding::preparation
 17/276 Test #156: pyinit::nrniv_py3.10_python_check_sys_stderr.encoding::preparation .......   Passed    0.02 sec
        Start 158: pyinit::nrniv_py3.10_nrnpython_check_sys_stderr.encoding::preparation
 18/276 Test #158: pyinit::nrniv_py3.10_nrnpython_check_sys_stderr.encoding::preparation ....   Passed    0.02 sec
        Start 160: pyinit::nrniv_py3.10_python_check_sys_stdin.encoding::preparation
 19/276 Test #160: pyinit::nrniv_py3.10_python_check_sys_stdin.encoding::preparation ........   Passed    0.02 sec
        Start 162: pyinit::nrniv_py3.10_nrnpython_check_sys_stdin.encoding::preparation
 20/276 Test #162: pyinit::nrniv_py3.10_nrnpython_check_sys_stdin.encoding::preparation .....   Passed    0.02 sec
        Start 164: pyinit::nrniv_py3.10_python_check_sys_stdout.encoding::preparation
 21/276 Test #164: pyinit::nrniv_py3.10_python_check_sys_stdout.encoding::preparation .......   Passed    0.02 sec
        Start 166: pyinit::nrniv_py3.10_nrnpython_check_sys_stdout.encoding::preparation
 22/276 Test #166: pyinit::nrniv_py3.10_nrnpython_check_sys_stdout.encoding::preparation ....   Passed    0.02 sec
        Start 172: pyinit::nrniv_pydef_python_check_sys_path::preparation
 23/276 Test #172: pyinit::nrniv_pydef_python_check_sys_path::preparation ...................   Passed    0.02 sec
        Start 174: pyinit::nrniv_pydef_nrnpython_check_sys_path::preparation
 24/276 Test #174: pyinit::nrniv_pydef_nrnpython_check_sys_path::preparation ................   Passed    0.02 sec
        Start 176: pyinit::nrniv_pydef_python_check_sys_prefix::preparation
 25/276 Test #176: pyinit::nrniv_pydef_python_check_sys_prefix::preparation .................   Passed    0.02 sec
        Start 178: pyinit::nrniv_pydef_nrnpython_check_sys_prefix::preparation
 26/276 Test #254: testcorenrn_patstim::coreneuron_cpu_offline::preparation .................   Passed    0.36 sec
        Start 260: testcorenrn_vecplay::coreneuron_cpu_offline::preparation
 27/276 Test #178: pyinit::nrniv_pydef_nrnpython_check_sys_prefix::preparation ..............   Passed    0.02 sec
        Start 180: pyinit::nrniv_pydef_python_check_sys_exec_prefix::preparation
 28/276 Test #180: pyinit::nrniv_pydef_python_check_sys_exec_prefix::preparation ............   Passed    0.02 sec
        Start 182: pyinit::nrniv_pydef_nrnpython_check_sys_exec_prefix::preparation
 29/276 Test #182: pyinit::nrniv_pydef_nrnpython_check_sys_exec_prefix::preparation .........   Passed    0.02 sec
        Start 184: pyinit::nrniv_pydef_python_check_sys_base_prefix::preparation
 30/276 Test #184: pyinit::nrniv_pydef_python_check_sys_base_prefix::preparation ............   Passed    0.02 sec
        Start 186: pyinit::nrniv_pydef_nrnpython_check_sys_base_prefix::preparation
 31/276 Test #186: pyinit::nrniv_pydef_nrnpython_check_sys_base_prefix::preparation .........   Passed    0.02 sec
        Start 188: pyinit::nrniv_pydef_python_check_sys_base_exec_prefix::preparation
 32/276 Test #188: pyinit::nrniv_pydef_python_check_sys_base_exec_prefix::preparation .......   Passed    0.02 sec
        Start 190: pyinit::nrniv_pydef_nrnpython_check_sys_base_exec_prefix::preparation
 33/276 Test #190: pyinit::nrniv_pydef_nrnpython_check_sys_base_exec_prefix::preparation ....   Passed    0.02 sec
        Start 192: pyinit::nrniv_pydef_python_check_sys_stderr.encoding::preparation
 34/276 Test #192: pyinit::nrniv_pydef_python_check_sys_stderr.encoding::preparation ........   Passed    0.02 sec
        Start 194: pyinit::nrniv_pydef_nrnpython_check_sys_stderr.encoding::preparation
 35/276 Test #194: pyinit::nrniv_pydef_nrnpython_check_sys_stderr.encoding::preparation .....   Passed    0.02 sec
        Start 196: pyinit::nrniv_pydef_python_check_sys_stdin.encoding::preparation
 36/276 Test #196: pyinit::nrniv_pydef_python_check_sys_stdin.encoding::preparation .........   Passed    0.02 sec
        Start 198: pyinit::nrniv_pydef_nrnpython_check_sys_stdin.encoding::preparation
 37/276 Test #198: pyinit::nrniv_pydef_nrnpython_check_sys_stdin.encoding::preparation ......   Passed    0.02 sec
        Start 200: pyinit::nrniv_pydef_python_check_sys_stdout.encoding::preparation
 38/276 Test #200: pyinit::nrniv_pydef_python_check_sys_stdout.encoding::preparation ........   Passed    0.03 sec
        Start 202: pyinit::nrniv_pydef_nrnpython_check_sys_stdout.encoding::preparation
 39/276 Test #202: pyinit::nrniv_pydef_nrnpython_check_sys_stdout.encoding::preparation .....   Passed    0.02 sec
        Start 210: external_ringtest::neuron
 40/276 Test #260: testcorenrn_vecplay::coreneuron_cpu_offline::preparation .................   Passed    0.31 sec
        Start 272: testcorenrn_watch::coreneuron_cpu_offline::preparation
 41/276 Test #272: testcorenrn_watch::coreneuron_cpu_offline::preparation ...................   Passed    0.31 sec
        Start 211: external_ringtest::neuron_mpi
 42/276 Test #211: external_ringtest::neuron_mpi ............................................   Passed    2.40 sec
        Start 212: external_ringtest::neuron_mpi_python
 43/276 Test #210: external_ringtest::neuron ................................................   Passed    4.18 sec
        Start 221: testcorenrn_bbcore::neuron
 44/276 Test #221: testcorenrn_bbcore::neuron ...............................................   Passed    0.31 sec
        Start 222: testcorenrn_bbcore::coreneuron_cpu_online
 45/276 Test #222: testcorenrn_bbcore::coreneuron_cpu_online ................................   Passed    0.56 sec
        Start 223: testcorenrn_bbcore::coreneuron_cpu_online_psolve_alternate
 46/276 Test #212: external_ringtest::neuron_mpi_python .....................................   Passed    2.84 sec
        Start 213: external_ringtest::coreneuron_cpu_mpi_offline_saverestore
 47/276 Test #223: testcorenrn_bbcore::coreneuron_cpu_online_psolve_alternate ...............   Passed    0.64 sec
        Start 224: testcorenrn_bbcore::coreneuron_cpu_offline
 48/276 Test #224: testcorenrn_bbcore::coreneuron_cpu_offline ...............................   Passed    0.46 sec
        Start 227: testcorenrn_conc::neuron
 49/276 Test #227: testcorenrn_conc::neuron .................................................   Passed    0.34 sec
        Start 228: testcorenrn_conc::coreneuron_cpu_online
 50/276 Test #228: testcorenrn_conc::coreneuron_cpu_online ..................................   Passed    0.58 sec
        Start 229: testcorenrn_conc::coreneuron_cpu_online_psolve_alternate
 51/276 Test #213: external_ringtest::coreneuron_cpu_mpi_offline_saverestore ................   Passed    1.85 sec
        Start 214: external_ringtest::coreneuron_cpu_mpi
 52/276 Test #229: testcorenrn_conc::coreneuron_cpu_online_psolve_alternate .................   Passed    0.63 sec
        Start 230: testcorenrn_conc::coreneuron_cpu_offline
 53/276 Test #230: testcorenrn_conc::coreneuron_cpu_offline .................................   Passed    0.28 sec
        Start 233: testcorenrn_deriv::neuron
 54/276 Test #233: testcorenrn_deriv::neuron ................................................   Passed    0.34 sec
        Start 234: testcorenrn_deriv::coreneuron_cpu_online
 55/276 Test #214: external_ringtest::coreneuron_cpu_mpi ....................................   Passed    0.99 sec
        Start 215: external_ringtest::coreneuron_cpu_mpi_python
 56/276 Test #234: testcorenrn_deriv::coreneuron_cpu_online .................................   Passed    0.69 sec
        Start 235: testcorenrn_deriv::coreneuron_cpu_online_psolve_alternate
 57/276 Test #235: testcorenrn_deriv::coreneuron_cpu_online_psolve_alternate ................   Passed    0.73 sec
        Start 236: testcorenrn_deriv::coreneuron_cpu_offline
 58/276 Test #215: external_ringtest::coreneuron_cpu_mpi_python .............................   Passed    1.38 sec
        Start 216: external_ringtest::coreneuron_cpu_mpi_offline
 59/276 Test #236: testcorenrn_deriv::coreneuron_cpu_offline ................................   Passed    0.27 sec
        Start 245: testcorenrn_kin::neuron
 60/276 Test #245: testcorenrn_kin::neuron ..................................................   Passed    0.31 sec
        Start 246: testcorenrn_kin::coreneuron_cpu_online
 61/276 Test #216: external_ringtest::coreneuron_cpu_mpi_offline ............................   Passed    0.54 sec
        Start 239: testcorenrn_gf::neuron
 62/276 Test #246: testcorenrn_kin::coreneuron_cpu_online ...................................   Passed    0.58 sec
        Start 247: testcorenrn_kin::coreneuron_cpu_online_psolve_alternate
 63/276 Test #247: testcorenrn_kin::coreneuron_cpu_online_psolve_alternate ..................   Passed    0.62 sec
        Start 248: testcorenrn_kin::coreneuron_cpu_offline
 64/276 Test #248: testcorenrn_kin::coreneuron_cpu_offline ..................................   Passed    0.27 sec
        Start   1: cmd_interface_test
 65/276 Test   #1: cmd_interface_test .......................................................   Passed    0.37 sec
        Start   2: interleave_info_constructor_test
 66/276 Test   #2: interleave_info_constructor_test .........................................   Passed    0.23 sec
        Start   3: alignment_test
 67/276 Test #239: testcorenrn_gf::neuron ...................................................   Passed    2.04 sec
        Start 240: testcorenrn_gf::coreneuron_cpu_online
 68/276 Test   #3: alignment_test ...........................................................   Passed    0.22 sec
        Start   4: queuing_test
 69/276 Test   #4: queuing_test .............................................................   Passed    0.24 sec
        Start   5: test-solver
 70/276 Test #240: testcorenrn_gf::coreneuron_cpu_online ....................................   Passed    0.73 sec
        Start 241: testcorenrn_gf::coreneuron_cpu_online_psolve_alternate
 71/276 Test   #5: test-solver ..............................................................   Passed    0.32 sec
        Start   6: lfp_test
 72/276 Test   #6: lfp_test .................................................................   Passed    0.44 sec
        Start   7: unit_tests::testneuron
 73/276 Test   #7: unit_tests::testneuron ...................................................   Passed    0.28 sec
        Start   8: unit_tests::testneuron_soa_erase_calls_terminate
 74/276 Test   #8: unit_tests::testneuron_soa_erase_calls_terminate .........................   Passed    0.11 sec
        Start   9: ringtest
 75/276 Test   #9: ringtest .................................................................   Passed    0.51 sec
        Start  10: connect_dend
 76/276 Test  #10: connect_dend .............................................................   Passed    0.17 sec
        Start  11: mpi_init::nrniv_mpiopt
 77/276 Test #241: testcorenrn_gf::coreneuron_cpu_online_psolve_alternate ...................   Passed    1.87 sec
        Start 242: testcorenrn_gf::coreneuron_cpu_offline
 78/276 Test  #11: mpi_init::nrniv_mpiopt ...................................................   Passed    0.34 sec
        Start  12: mpi_init::nrniv_nrnmpi_init
 79/276 Test  #12: mpi_init::nrniv_nrnmpi_init ..............................................   Passed    0.33 sec
        Start  13: mpi_init::python_nrnmpi_init
 80/276 Test #242: testcorenrn_gf::coreneuron_cpu_offline ...................................   Passed    0.40 sec
        Start 251: testcorenrn_patstim::neuron
 81/276 Test #251: testcorenrn_patstim::neuron ..............................................   Passed    0.54 sec
        Start 252: testcorenrn_patstim::coreneuron_cpu_offline_saverestore
 82/276 Test  #13: mpi_init::python_nrnmpi_init .............................................   Passed    0.72 sec
        Start  14: mpi_init::python_mpienv
 83/276 Test  #14: mpi_init::python_mpienv ..................................................   Passed    0.70 sec
        Start  15: mpi_init::nrniv_mpiexec_mpiopt
 84/276 Test #252: testcorenrn_patstim::coreneuron_cpu_offline_saverestore ..................   Passed    1.03 sec
        Start 253: testcorenrn_patstim::coreneuron_cpu_offline
 85/276 Test  #15: mpi_init::nrniv_mpiexec_mpiopt ...........................................   Passed    0.26 sec
        Start  16: mpi_init::nrniv_mpiexec_nrnmpi_init
 86/276 Test #253: testcorenrn_patstim::coreneuron_cpu_offline ..............................   Passed    0.28 sec
        Start 256: testcorenrn_vecplay::neuron
 87/276 Test  #16: mpi_init::nrniv_mpiexec_nrnmpi_init ......................................   Passed    0.26 sec
        Start  17: mpi_init::python_mpiexec_nrnmpi_init
 88/276 Test #256: testcorenrn_vecplay::neuron ..............................................   Passed    0.41 sec
        Start 257: testcorenrn_vecplay::coreneuron_cpu_online
 89/276 Test  #17: mpi_init::python_mpiexec_nrnmpi_init .....................................   Passed    0.92 sec
        Start  18: mpi_init::python_mpiexec_mpienv
 90/276 Test #257: testcorenrn_vecplay::coreneuron_cpu_online ...............................   Passed    0.76 sec
        Start 258: testcorenrn_vecplay::coreneuron_cpu_online_psolve_alternate
 91/276 Test  #18: mpi_init::python_mpiexec_mpienv ..........................................   Passed    0.85 sec
        Start  19: pytest::basic_tests_py3.10
 92/276 Test #258: testcorenrn_vecplay::coreneuron_cpu_online_psolve_alternate ..............   Passed    0.83 sec
        Start 259: testcorenrn_vecplay::coreneuron_cpu_offline
 93/276 Test #259: testcorenrn_vecplay::coreneuron_cpu_offline ..............................   Passed    0.28 sec
        Start 268: testcorenrn_watch::neuron
 94/276 Test  #19: pytest::basic_tests_py3.10 ...............................................   Passed    1.02 sec
        Start  20: pytest_coreneuron::basic_tests_py3.10
 95/276 Test #268: testcorenrn_watch::neuron ................................................   Passed    0.59 sec
        Start 269: testcorenrn_watch::coreneuron_cpu_online
 96/276 Test #269: testcorenrn_watch::coreneuron_cpu_online .................................   Passed    0.76 sec
        Start 270: testcorenrn_watch::coreneuron_cpu_online_psolve_alternate
 97/276 Test #270: testcorenrn_watch::coreneuron_cpu_online_psolve_alternate ................   Passed    0.81 sec
        Start 271: testcorenrn_watch::coreneuron_cpu_offline
 98/276 Test #271: testcorenrn_watch::coreneuron_cpu_offline ................................   Passed    0.40 sec
        Start 274: testcorenrn_netstimdirect::direct_netstimdirect
 99/276 Test #274: testcorenrn_netstimdirect::direct_netstimdirect ..........................   Passed    0.84 sec
        Start 275: testcorenrn_netstimdirect::direct_netstimdirect_psolve_alternate
100/276 Test #275: testcorenrn_netstimdirect::direct_netstimdirect_psolve_alternate .........   Passed    0.87 sec
        Start  21: datahandle::datahandle_tests
        Start  22: coverage_tests::cover_tests
101/276 Test  #21: datahandle::datahandle_tests .............................................   Passed    0.88 sec
        Start  23: example_nmodl::ca_ap_hoc
102/276 Test  #22: coverage_tests::cover_tests ..............................................   Passed    1.04 sec
        Start  24: example_nmodl::cabpump_hoc
103/276 Test  #23: example_nmodl::ca_ap_hoc .................................................   Passed    0.42 sec
        Start  25: example_nmodl::cachan_hoc
104/276 Test  #20: pytest_coreneuron::basic_tests_py3.10 ....................................   Passed    5.05 sec
        Start  26: example_nmodl::cadif_hoc
105/276 Test  #24: example_nmodl::cabpump_hoc ...............................................   Passed    0.30 sec
        Start  27: example_nmodl::cadifusl_hoc
106/276 Test  #25: example_nmodl::cachan_hoc ................................................   Passed    0.14 sec
        Start  28: example_nmodl::cadifusl1_hoc
107/276 Test  #26: example_nmodl::cadif_hoc .................................................   Passed    0.18 sec
        Start  29: example_nmodl::cadifusl2_hoc
108/276 Test  #27: example_nmodl::cadifusl_hoc ..............................................   Passed    0.20 sec
        Start  30: example_nmodl::cagk_hoc
109/276 Test  #30: example_nmodl::cagk_hoc ..................................................   Passed    0.14 sec
        Start  31: example_nmodl::capmp_hoc
110/276 Test  #29: example_nmodl::cadifusl2_hoc .............................................   Passed    0.17 sec
        Start  32: example_nmodl::cv_hoc
111/276 Test  #28: example_nmodl::cadifusl1_hoc .............................................   Passed    0.29 sec
        Start  33: example_nmodl::fh_hoc
112/276 Test  #32: example_nmodl::cv_hoc ....................................................   Passed    0.14 sec
        Start  34: example_nmodl::fit1_hoc
113/276 Test  #33: example_nmodl::fh_hoc ....................................................   Passed    0.14 sec
        Start  35: example_nmodl::gap_hoc
114/276 Test  #31: example_nmodl::capmp_hoc .................................................   Passed    0.25 sec
        Start  36: example_nmodl::hh1_hoc
115/276 Test  #34: example_nmodl::fit1_hoc ..................................................   Passed    0.14 sec
        Start  37: example_nmodl::hhvect_hoc
116/276 Test  #35: example_nmodl::gap_hoc ...................................................   Passed    0.15 sec
        Start  38: example_nmodl::nacum_hoc
117/276 Test  #36: example_nmodl::hh1_hoc ...................................................   Passed    0.15 sec
        Start  39: example_nmodl::nadifl1_hoc
118/276 Test  #37: example_nmodl::hhvect_hoc ................................................   Passed    0.15 sec
        Start  40: example_nmodl::nadifl2_hoc
119/276 Test  #38: example_nmodl::nacum_hoc .................................................   Passed    0.15 sec
        Start  41: example_nmodl::nadifl3_hoc
120/276 Test  #39: example_nmodl::nadifl1_hoc ...............................................   Passed    0.16 sec
        Start  42: example_nmodl::nadifl4_hoc
121/276 Test  #40: example_nmodl::nadifl2_hoc ...............................................   Passed    0.18 sec
        Start  43: example_nmodl::obj_ex_hoc
122/276 Test  #41: example_nmodl::nadifl3_hoc ...............................................   Passed    0.17 sec
        Start  44: example_nmodl::order_hoc
123/276 Test  #42: example_nmodl::nadifl4_hoc ...............................................   Passed    0.18 sec
        Start  45: example_nmodl::passiv_hoc
124/276 Test  #43: example_nmodl::obj_ex_hoc ................................................   Passed    0.14 sec
        Start  46: example_nmodl::stim1_hoc
125/276 Test  #44: example_nmodl::order_hoc .................................................   Passed    0.17 sec
        Start  47: example_nmodl::syn1_hoc
126/276 Test  #45: example_nmodl::passiv_hoc ................................................   Passed    0.14 sec
        Start  48: example_nmodl::synpre_hoc
127/276 Test  #46: example_nmodl::stim1_hoc .................................................   Passed    0.14 sec
        Start  49: example_nmodl::tstextrn_hoc
128/276 Test  #47: example_nmodl::syn1_hoc ..................................................   Passed    0.15 sec
        Start  50: example_nmodl::tstpnt1_hoc
129/276 Test  #49: example_nmodl::tstextrn_hoc ..............................................   Passed    0.14 sec
        Start  51: example_nmodl::tstpnt2_hoc
130/276 Test  #48: example_nmodl::synpre_hoc ................................................   Passed    0.21 sec
        Start  52: example_nmodl::tstvec_hoc
131/276 Test  #50: example_nmodl::tstpnt1_hoc ...............................................   Passed    0.14 sec
        Start  53: example_nmodl::cagkftab_py
132/276 Test  #51: example_nmodl::tstpnt2_hoc ...............................................   Passed    0.14 sec
        Start  54: example_nmodl::expsynspine_py
133/276 Test  #52: example_nmodl::tstvec_hoc ................................................   Passed    0.14 sec
        Start  55: example_nmodl::nonlin_py
134/276 Test  #54: example_nmodl::expsynspine_py ............................................   Passed    0.70 sec
        Start  56: example_nmodl::tstpnt1_py
135/276 Test  #56: example_nmodl::tstpnt1_py ................................................   Passed    0.51 sec
        Start  57: example_nmodl::tstpnt2_py
136/276 Test  #57: example_nmodl::tstpnt2_py ................................................   Passed    0.50 sec
        Start  58: example_nmodl::vlag_py
137/276 Test  #58: example_nmodl::vlag_py ...................................................   Passed    0.53 sec
        Start  59: hoctests::test_loadbal_hoc
138/276 Test  #59: hoctests::test_loadbal_hoc ...............................................   Passed    0.39 sec
        Start  60: hoctests::perf1_hoc
139/276 Test  #55: example_nmodl::nonlin_py .................................................   Passed    2.63 sec
        Start  61: hoctests::test1_hoc
140/276 Test  #61: hoctests::test1_hoc ......................................................   Passed    0.35 sec
        Start  62: hoctests::test2_hoc
141/276 Test  #62: hoctests::test2_hoc ......................................................   Passed    0.21 sec
        Start  63: hoctests::test3_hoc
142/276 Test  #63: hoctests::test3_hoc ......................................................   Passed    0.16 sec
        Start  64: hoctests::test4_hoc
143/276 Test  #64: hoctests::test4_hoc ......................................................   Passed    0.13 sec
        Start  65: hoctests::test5_hoc
144/276 Test  #65: hoctests::test5_hoc ......................................................   Passed    0.13 sec
        Start  66: hoctests::test6_hoc
145/276 Test  #66: hoctests::test6_hoc ......................................................   Passed    0.12 sec
        Start  67: hoctests::test7_hoc
146/276 Test  #67: hoctests::test7_hoc ......................................................   Passed    0.13 sec
        Start  68: hoctests::test8_hoc
147/276 Test  #68: hoctests::test8_hoc ......................................................   Passed    0.13 sec
        Start  69: hoctests::test9_hoc
148/276 Test  #60: hoctests::perf1_hoc ......................................................   Passed    1.51 sec
        Start  70: hoctests::test_hocGUI2_py
149/276 Test  #53: example_nmodl::cagkftab_py ...............................................   Passed    4.22 sec
        Start  71: hoctests::test_kschan_py
150/276 Test  #69: hoctests::test9_hoc ......................................................   Passed    0.14 sec
        Start  72: hoctests::test_mechfunc_py
151/276 Test  #72: hoctests::test_mechfunc_py ...............................................   Passed    0.74 sec
        Start  73: hoctests::test_mode_py
152/276 Test  #70: hoctests::test_hocGUI2_py ................................................   Passed    0.81 sec
        Start  74: hoctests::test_neurondemo_py
153/276 Test  #71: hoctests::test_kschan_py .................................................   Passed    0.88 sec
        Start  75: hoctests::test_nrniv-launch_py
154/276 Test  #73: hoctests::test_mode_py ...................................................   Passed    0.62 sec
        Start  76: hoctests::test_setdata_py
155/276 Test  #75: hoctests::test_nrniv-launch_py ...........................................   Passed    0.51 sec
        Start  77: hoctests::test_shape_py
156/276 Test  #74: hoctests::test_neurondemo_py .............................................   Passed    0.66 sec
        Start  78: hoctests::test_thread_partition_py
157/276 Test  #76: hoctests::test_setdata_py ................................................   Passed    0.72 sec
        Start  79: hoctests::test1_py
158/276 Test  #77: hoctests::test_shape_py ..................................................   Passed    0.78 sec
        Start  80: hoctests::test2_py
159/276 Test  #78: hoctests::test_thread_partition_py .......................................   Passed    0.96 sec
        Start  81: hoctests::test9_py
160/276 Test  #79: hoctests::test1_py .......................................................   Passed    0.79 sec
        Start  87: coreneuron_standalone::test_nrn_corenrn_standalone
161/276 Test  #80: hoctests::test2_py .......................................................   Passed    0.80 sec
        Start  88: nmodl_tests::test_table
162/276 Test  #81: hoctests::test9_py .......................................................   Passed    0.69 sec
        Start  89: nmodl_tests::test_disc
163/276 Test  #88: nmodl_tests::test_table ..................................................   Passed    1.03 sec
        Start  90: nmodl_tests::test_function_table
164/276 Test  #87: coreneuron_standalone::test_nrn_corenrn_standalone .......................   Passed    1.17 sec
        Start  91: nmodl_tests::test_kinetic
165/276 Test  #89: nmodl_tests::test_disc ...................................................   Passed    1.01 sec
        Start  92: coreneuron_modtests::version_macros
166/276 Test  #90: nmodl_tests::test_function_table .........................................   Passed    0.91 sec
        Start  94: coreneuron_modtests::fornetcon_py_cpu
167/276 Test  #91: nmodl_tests::test_kinetic ................................................   Passed    0.89 sec
        Start  95: coreneuron_modtests::direct_py_cpu
168/276 Test  #92: coreneuron_modtests::version_macros ......................................   Passed    1.06 sec
        Start  96: coreneuron_modtests::direct_hoc_cpu
169/276 Test  #94: coreneuron_modtests::fornetcon_py_cpu ....................................   Passed    1.00 sec
        Start  97: coreneuron_modtests::spikes_py_cpu
170/276 Test  #95: coreneuron_modtests::direct_py_cpu .......................................   Passed    1.04 sec
        Start  98: coreneuron_modtests::spikes_file_mode_py_cpu
171/276 Test  #96: coreneuron_modtests::direct_hoc_cpu ......................................   Passed    0.84 sec
        Start  99: coreneuron_modtests::fast_imem_py_cpu
172/276 Test  #97: coreneuron_modtests::spikes_py_cpu .......................................   Passed    0.94 sec
        Start 100: coreneuron_modtests::datareturn_py_cpu
173/276 Test  #98: coreneuron_modtests::spikes_file_mode_py_cpu .............................   Passed    0.92 sec
        Start 101: coreneuron_modtests::test_units_py_cpu
174/276 Test  #99: coreneuron_modtests::fast_imem_py_cpu ....................................   Passed    1.11 sec
        Start 102: coreneuron_modtests::test_netmove_py_cpu
175/276 Test #101: coreneuron_modtests::test_units_py_cpu ...................................   Passed    0.80 sec
        Start 103: coreneuron_modtests::test_pointer_py_cpu
176/276 Test #100: coreneuron_modtests::datareturn_py_cpu ...................................   Passed    1.57 sec
        Start 104: coreneuron_modtests::test_watchrange_py_cpu
177/276 Test #102: coreneuron_modtests::test_netmove_py_cpu .................................   Passed    1.56 sec
        Start 105: coreneuron_modtests::test_psolve_py_cpu
178/276 Test #104: coreneuron_modtests::test_watchrange_py_cpu ..............................   Passed    0.84 sec
        Start 106: coreneuron_modtests::test_ba_py_cpu
179/276 Test #105: coreneuron_modtests::test_psolve_py_cpu ..................................   Passed    1.08 sec
        Start 107: coreneuron_modtests::test_natrans_py_cpu
180/276 Test #106: coreneuron_modtests::test_ba_py_cpu ......................................   Passed    0.72 sec
        Start 110: nmodl_tests_coreneuron::test_table_coreneuron_cpu
181/276 Test #107: coreneuron_modtests::test_natrans_py_cpu .................................   Passed    0.95 sec
        Start 111: nmodl_tests_coreneuron::test_disc_coreneuron_cpu
182/276 Test #110: nmodl_tests_coreneuron::test_table_coreneuron_cpu ........................   Passed    0.83 sec
        Start 112: nmodl_tests_coreneuron::test_function_table_coreneuron_cpu
183/276 Test #103: coreneuron_modtests::test_pointer_py_cpu .................................   Passed    3.14 sec
        Start 113: nmodl_tests_coreneuron::test_kinetic_coreneuron_cpu
184/276 Test #111: nmodl_tests_coreneuron::test_disc_coreneuron_cpu .........................   Passed    0.93 sec
        Start 114: modlunit_unitstest
185/276 Test #112: nmodl_tests_coreneuron::test_function_table_coreneuron_cpu ...............   Passed    0.89 sec
        Start 115: modlunit_hh
186/276 Test #113: nmodl_tests_coreneuron::test_kinetic_coreneuron_cpu ......................   Passed    0.91 sec
        Start 116: modlunit_stim
187/276 Test #114: modlunit_unitstest .......................................................   Passed    0.22 sec
        Start 117: modlunit_pattern
188/276 Test #115: modlunit_hh ..............................................................   Passed    0.16 sec
        Start 118: pyinit::nrniv_script.py
189/276 Test #116: modlunit_stim ............................................................   Passed    0.13 sec
        Start 119: pyinit::nrniv_script.py_error
190/276 Test #117: modlunit_pattern .........................................................   Passed    0.08 sec
        Start 120: pyinit::nrniv_two_scripts.py
191/276 Test #119: pyinit::nrniv_script.py_error ............................................   Passed    0.13 sec
        Start 121: pyinit::nrniv_two_scripts.py_error_check_code
192/276 Test #118: pyinit::nrniv_script.py ..................................................   Passed    0.13 sec
        Start 122: pyinit::nrniv_two_scripts.py_error_check_output
193/276 Test #120: pyinit::nrniv_two_scripts.py .............................................   Passed    0.13 sec
        Start 123: pyinit::nrniv_python_command
194/276 Test #121: pyinit::nrniv_two_scripts.py_error_check_code ............................   Passed    0.12 sec
        Start 124: pyinit::nrniv_python_command_error
195/276 Test #122: pyinit::nrniv_two_scripts.py_error_check_output ..........................   Passed    0.12 sec
        Start 125: pyinit::nrniv_python_script.py
196/276 Test #123: pyinit::nrniv_python_command .............................................   Passed    0.13 sec
        Start 126: pyinit::nrniv_python_script.py_error
197/276 Test #124: pyinit::nrniv_python_command_error .......................................   Passed    0.13 sec
        Start 127: pyinit::nrniv_python_command_twice
198/276 Test #125: pyinit::nrniv_python_script.py ...........................................   Passed    0.13 sec
        Start 128: pyinit::nrniv_python_script.py_twice
199/276 Test #126: pyinit::nrniv_python_script.py_error .....................................   Passed    0.13 sec
        Start 129: pyinit::nrniv_python_command_args
200/276 Test #127: pyinit::nrniv_python_command_twice .......................................   Passed    0.13 sec
        Start 130: pyinit::nrniv_python_script.py_args
201/276 Test #128: pyinit::nrniv_python_script.py_twice .....................................   Passed    0.13 sec
        Start 131: pyinit::nrniv_nopython_PythonObject
202/276 Test #129: pyinit::nrniv_python_command_args ........................................   Passed    0.13 sec
        Start 132: pyinit::nrniv_nopython_PythonObject_pyexe
203/276 Test #131: pyinit::nrniv_nopython_PythonObject ......................................   Passed    0.11 sec
        Start 133: pyinit::nrniv_nopython_PythonObject_pyenv
204/276 Test #130: pyinit::nrniv_python_script.py_args ......................................   Passed    0.13 sec
        Start 134: pyinit::nrniv_py3.10_python_command_version_check
205/276 Test #132: pyinit::nrniv_nopython_PythonObject_pyexe ................................   Passed    0.11 sec
        Start 135: pyinit::nrniv_py3.10_python_check_sys_path
206/276 Test #133: pyinit::nrniv_nopython_PythonObject_pyenv ................................   Passed    0.11 sec
        Start 137: pyinit::nrniv_py3.10_nrnpython_check_sys_path
207/276 Test #134: pyinit::nrniv_py3.10_python_command_version_check ........................   Passed    0.13 sec
        Start 139: pyinit::nrniv_py3.10_python_check_sys_prefix
208/276 Test #135: pyinit::nrniv_py3.10_python_check_sys_path ...............................   Passed    0.14 sec
        Start 141: pyinit::nrniv_py3.10_nrnpython_check_sys_prefix
209/276 Test #137: pyinit::nrniv_py3.10_nrnpython_check_sys_path ............................   Passed    0.13 sec
        Start 143: pyinit::nrniv_py3.10_python_check_sys_exec_prefix
210/276 Test #139: pyinit::nrniv_py3.10_python_check_sys_prefix .............................   Passed    0.13 sec
        Start 145: pyinit::nrniv_py3.10_nrnpython_check_sys_exec_prefix
211/276 Test #141: pyinit::nrniv_py3.10_nrnpython_check_sys_prefix ..........................   Passed    0.14 sec
        Start 147: pyinit::nrniv_py3.10_python_check_sys_base_prefix
212/276 Test #143: pyinit::nrniv_py3.10_python_check_sys_exec_prefix ........................   Passed    0.13 sec
        Start 149: pyinit::nrniv_py3.10_nrnpython_check_sys_base_prefix
213/276 Test #145: pyinit::nrniv_py3.10_nrnpython_check_sys_exec_prefix .....................   Passed    0.13 sec
        Start 151: pyinit::nrniv_py3.10_python_check_sys_base_exec_prefix
214/276 Test #147: pyinit::nrniv_py3.10_python_check_sys_base_prefix ........................   Passed    0.13 sec
        Start 153: pyinit::nrniv_py3.10_nrnpython_check_sys_base_exec_prefix
215/276 Test #149: pyinit::nrniv_py3.10_nrnpython_check_sys_base_prefix .....................   Passed    0.13 sec
        Start 155: pyinit::nrniv_py3.10_python_check_sys_stderr.encoding
216/276 Test #151: pyinit::nrniv_py3.10_python_check_sys_base_exec_prefix ...................   Passed    0.13 sec
        Start 157: pyinit::nrniv_py3.10_nrnpython_check_sys_stderr.encoding
217/276 Test #153: pyinit::nrniv_py3.10_nrnpython_check_sys_base_exec_prefix ................   Passed    0.13 sec
        Start 159: pyinit::nrniv_py3.10_python_check_sys_stdin.encoding
218/276 Test #155: pyinit::nrniv_py3.10_python_check_sys_stderr.encoding ....................   Passed    0.13 sec
        Start 161: pyinit::nrniv_py3.10_nrnpython_check_sys_stdin.encoding
219/276 Test #157: pyinit::nrniv_py3.10_nrnpython_check_sys_stderr.encoding .................   Passed    0.13 sec
        Start 163: pyinit::nrniv_py3.10_python_check_sys_stdout.encoding
220/276 Test #159: pyinit::nrniv_py3.10_python_check_sys_stdin.encoding .....................   Passed    0.13 sec
        Start 165: pyinit::nrniv_py3.10_nrnpython_check_sys_stdout.encoding
221/276 Test #161: pyinit::nrniv_py3.10_nrnpython_check_sys_stdin.encoding ..................   Passed    0.13 sec
        Start 167: pyinit::nrniv_py3.10_python_command_import_neuron
222/276 Test #163: pyinit::nrniv_py3.10_python_check_sys_stdout.encoding ....................   Passed    0.13 sec
        Start 168: pyinit::py3.10_command_import_neuron
223/276 Test #165: pyinit::nrniv_py3.10_nrnpython_check_sys_stdout.encoding .................   Passed    0.19 sec
        Start 169: pyinit::nrniv_py3.10_hoc_command_nrnpython
224/276 Test #169: pyinit::nrniv_py3.10_hoc_command_nrnpython ...............................   Passed    0.31 sec
        Start 170: pyinit::nrniv_pydef_python_command_version_check
225/276 Test #167: pyinit::nrniv_py3.10_python_command_import_neuron ........................   Passed    0.60 sec
        Start 171: pyinit::nrniv_pydef_python_check_sys_path
226/276 Test #168: pyinit::py3.10_command_import_neuron .....................................   Passed    0.59 sec
        Start 173: pyinit::nrniv_pydef_nrnpython_check_sys_path
227/276 Test #170: pyinit::nrniv_pydef_python_command_version_check .........................   Passed    0.15 sec
        Start 175: pyinit::nrniv_pydef_python_check_sys_prefix
228/276 Test #171: pyinit::nrniv_pydef_python_check_sys_path ................................   Passed    0.14 sec
        Start 177: pyinit::nrniv_pydef_nrnpython_check_sys_prefix
229/276 Test #173: pyinit::nrniv_pydef_nrnpython_check_sys_path .............................   Passed    0.14 sec
        Start 179: pyinit::nrniv_pydef_python_check_sys_exec_prefix
230/276 Test #175: pyinit::nrniv_pydef_python_check_sys_prefix ..............................   Passed    0.13 sec
        Start 181: pyinit::nrniv_pydef_nrnpython_check_sys_exec_prefix
231/276 Test #177: pyinit::nrniv_pydef_nrnpython_check_sys_prefix ...........................   Passed    0.14 sec
        Start 183: pyinit::nrniv_pydef_python_check_sys_base_prefix
232/276 Test #179: pyinit::nrniv_pydef_python_check_sys_exec_prefix .........................   Passed    0.13 sec
        Start 185: pyinit::nrniv_pydef_nrnpython_check_sys_base_prefix
233/276 Test #181: pyinit::nrniv_pydef_nrnpython_check_sys_exec_prefix ......................   Passed    0.13 sec
        Start 187: pyinit::nrniv_pydef_python_check_sys_base_exec_prefix
234/276 Test #183: pyinit::nrniv_pydef_python_check_sys_base_prefix .........................   Passed    0.13 sec
        Start 189: pyinit::nrniv_pydef_nrnpython_check_sys_base_exec_prefix
235/276 Test #185: pyinit::nrniv_pydef_nrnpython_check_sys_base_prefix ......................   Passed    0.13 sec
        Start 191: pyinit::nrniv_pydef_python_check_sys_stderr.encoding
236/276 Test #187: pyinit::nrniv_pydef_python_check_sys_base_exec_prefix ....................   Passed    0.13 sec
        Start 193: pyinit::nrniv_pydef_nrnpython_check_sys_stderr.encoding
237/276 Test #189: pyinit::nrniv_pydef_nrnpython_check_sys_base_exec_prefix .................   Passed    0.13 sec
        Start 195: pyinit::nrniv_pydef_python_check_sys_stdin.encoding
238/276 Test #191: pyinit::nrniv_pydef_python_check_sys_stderr.encoding .....................   Passed    0.13 sec
        Start 197: pyinit::nrniv_pydef_nrnpython_check_sys_stdin.encoding
239/276 Test #193: pyinit::nrniv_pydef_nrnpython_check_sys_stderr.encoding ..................   Passed    0.13 sec
        Start 199: pyinit::nrniv_pydef_python_check_sys_stdout.encoding
240/276 Test #195: pyinit::nrniv_pydef_python_check_sys_stdin.encoding ......................   Passed    0.14 sec
        Start 201: pyinit::nrniv_pydef_nrnpython_check_sys_stdout.encoding
241/276 Test #197: pyinit::nrniv_pydef_nrnpython_check_sys_stdin.encoding ...................   Passed    0.13 sec
        Start 203: pyinit::nrniv_pydef_python_command_import_neuron
242/276 Test #199: pyinit::nrniv_pydef_python_check_sys_stdout.encoding .....................   Passed    0.13 sec
        Start 204: pyinit::pydef_command_import_neuron
243/276 Test #201: pyinit::nrniv_pydef_nrnpython_check_sys_stdout.encoding ..................   Passed    0.13 sec
        Start 205: pyinit::nrniv_pydef_hoc_command_nrnpython
244/276 Test #205: pyinit::nrniv_pydef_hoc_command_nrnpython ................................   Passed    0.31 sec
        Start 206: external_nrntest
245/276 Test #204: pyinit::pydef_command_import_neuron ......................................   Passed    0.53 sec
        Start 226: testcorenrn_bbcore::compare_results
246/276 Test #203: pyinit::nrniv_pydef_python_command_import_neuron .........................   Passed    0.59 sec
        Start 232: testcorenrn_conc::compare_results
247/276 Test #232: testcorenrn_conc::compare_results ........................................   Passed    0.11 sec
        Start 238: testcorenrn_deriv::compare_results
248/276 Test #226: testcorenrn_bbcore::compare_results ......................................   Passed    0.17 sec
        Start 244: testcorenrn_gf::compare_results
249/276 Test #238: testcorenrn_deriv::compare_results .......................................   Passed    0.02 sec
        Start 250: testcorenrn_kin::compare_results
250/276 Test #244: testcorenrn_gf::compare_results ..........................................   Passed    0.02 sec
        Start 255: testcorenrn_patstim::compare_results
251/276 Test #250: testcorenrn_kin::compare_results .........................................   Passed    0.02 sec
        Start 261: testcorenrn_vecplay::compare_results
252/276 Test #255: testcorenrn_patstim::compare_results .....................................   Passed    0.02 sec
        Start 273: testcorenrn_watch::compare_results
253/276 Test #261: testcorenrn_vecplay::compare_results .....................................   Passed    0.02 sec
        Start 276: testcorenrn_netstimdirect::compare_results
254/276 Test #273: testcorenrn_watch::compare_results .......................................   Passed    0.02 sec
255/276 Test #276: testcorenrn_netstimdirect::compare_results ...............................   Passed    0.02 sec
        Start  83: parallel::partrans
256/276 Test  #83: parallel::partrans .......................................................   Passed    0.96 sec
        Start  84: parallel::netpar
257/276 Test  #84: parallel::netpar .........................................................   Passed    0.80 sec
        Start  85: parallel::bas
258/276 Test  #85: parallel::bas ............................................................   Passed    3.70 sec
        Start  86: parallel::nrntest_fast
259/276 Test  #86: parallel::nrntest_fast ...................................................   Passed    1.33 sec
        Start  93: coreneuron_modtests::inputpresyn_py
260/276 Test  #93: coreneuron_modtests::inputpresyn_py ......................................   Passed    0.87 sec
        Start 108: coreneuron_modtests::spikes_mpi_file_mode_py_cpu
261/276 Test #108: coreneuron_modtests::spikes_mpi_file_mode_py_cpu .........................   Passed    1.05 sec
262/276 Test #206: external_nrntest .........................................................   Passed   42.71 sec
        Start 266: testcorenrn_vecevent::coreneuron_cpu_offline::preparation
263/276 Test #266: testcorenrn_vecevent::coreneuron_cpu_offline::preparation ................   Passed    0.32 sec
        Start 207: reduced_dentate::neuron
264/276 Test #207: reduced_dentate::neuron ..................................................   Passed   39.97 sec
        Start 208: reduced_dentate::coreneuron_cpu
265/276 Test #208: reduced_dentate::coreneuron_cpu ..........................................   Passed   32.70 sec
        Start 218: external_ringtest::coreneuron_cpu_mpi_threads
266/276 Test #218: external_ringtest::coreneuron_cpu_mpi_threads ............................   Passed    1.02 sec
        Start 219: external_ringtest::coreneuron_cpu_mpi_threads_python
267/276 Test #219: external_ringtest::coreneuron_cpu_mpi_threads_python .....................   Passed    1.19 sec
        Start 262: testcorenrn_vecevent::neuron
268/276 Test #262: testcorenrn_vecevent::neuron .............................................   Passed    0.33 sec
        Start 263: testcorenrn_vecevent::coreneuron_cpu_online
269/276 Test #263: testcorenrn_vecevent::coreneuron_cpu_online ..............................   Passed    0.64 sec
        Start 264: testcorenrn_vecevent::coreneuron_cpu_online_psolve_alternate
270/276 Test #264: testcorenrn_vecevent::coreneuron_cpu_online_psolve_alternate .............   Passed    0.68 sec
        Start 265: testcorenrn_vecevent::coreneuron_cpu_offline
271/276 Test #265: testcorenrn_vecevent::coreneuron_cpu_offline .............................   Passed    0.27 sec
        Start  82: parallel::subworld
272/276 Test  #82: parallel::subworld .......................................................   Passed    1.19 sec
        Start 109: coreneuron_modtests::test_subworlds_py_cpu
273/276 Test #109: coreneuron_modtests::test_subworlds_py_cpu ...............................   Passed    1.87 sec
        Start 209: reduced_dentate::compare_results
        Start 220: external_ringtest::compare_results
        Start 267: testcorenrn_vecevent::compare_results
274/276 Test #209: reduced_dentate::compare_results .........................................   Passed    0.02 sec
275/276 Test #267: testcorenrn_vecevent::compare_results ....................................   Passed    0.02 sec
276/276 Test #220: external_ringtest::compare_results .......................................   Passed    0.02 sec

100% tests passed, 0 tests failed out of 276

Total Test time (real) = 171.49 sec
$ cmake --build . --target install
[0/2] Re-checking globbed directories...
[1/5] Update hh.mod for CoreNEURON compatibility
[2/5] Generating help_data.dat
[3/5] cd /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/src/nrnoc && /opt/homebrew/Cellar/cmake/3.24.2/bin/cmake -E env PROJECT_VERSION=9.0.0 bash /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/git2nrnversion_h.sh /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn > nrnversion.h.tmp && /opt/homebrew/Cellar/cmake/3.24.2/bin/cmake -E copy_if_different nrnversion.h.tmp nrnversion.h
fatal: No names found, cannot describe anything.
[4/5] Running utility command for hoc_module
INFO:root:setup.py called with:setup.py build --cmake-build-dir /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build --disable-rx3d --without-nrnpython --build-lib=/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib/python build_ext --define=NRN_ASAN_ENABLED,USE_PYTHON,NRN_ENABLE_THREADS
INFO:root:Setting SDKROOT=/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX12.3.sdk
WARNING:root:You are building a wheel with a Python built for macOS >=12.0.0. Your wheel won't run on older versions, consider using an official Python build from python.org
WARNING:root:Setting MACOSX_DEPLOYMENT_TARGET=12.0
INFO:root:Extension common compile flags defaultdict(<class 'list'>, {'library_dirs': ['/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/build/lib'], 'libraries': ['nrniv'], 'language': 'c++'})
INFO:root:RX3D is DISABLED
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/lib/python3.10/site-packages/setuptools/__init__.py:80: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated.
!!

        ********************************************************************************
        Requirements should be satisfied by a PEP 517 installer.
        If you are using pip, you can try `pip install --use-pep517`.
        ********************************************************************************

!!
  dist.fetch_build_eggs(dist.setup_requires)
WARNING setuptools_scm.pyproject_reading toml section missing 'pyproject.toml does not contain a tool.setuptools_scm section'
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/venv/lib/python3.10/site-packages/setuptools_scm/git.py:163: UserWarning: "/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn" is shallow and may cause errors
  warnings.warn(f'"{wd.path}" is shallow and may cause errors')
INFO:root:running build
INFO:root:running build_py
INFO:root:running build_ext
INFO:root:==> Building Python extensions
INFO:root:running build_scripts
[4/5] Install the project...
-- Install configuration: "Custom"
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrn-enable-sanitizer
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libsymtab.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/librxdmath.dylib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libnrniv.dylib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libnrngnu.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libvisitor.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/hclass3.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/hoc.cpython-310-darwin.so
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/expect_hocerr.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/psection.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/metadata.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/morphml.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/xml2nrn.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/neuroml.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/rdxml.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/biophysics.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/config.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/units.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/sections.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxdException.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/options.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/plugins.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxdsection.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/species.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxdmath.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rate.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/region.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/multiCompartmentReaction.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/constants.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/dimension3.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/section1d.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/export.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/initializer.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rangevar.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/geometry.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxd.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/generalizedReaction.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/nodelist.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/node.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/gui.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/reaction.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/_subclass.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_all.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/strtobool.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/capture_stdout.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/checkresult.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_neuron.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_vector.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_rxd.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/_config_params.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/coreneuron.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/doc.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/setup_threejs.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/config.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/rangevar.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/plotshape.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/utilities.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/crxd
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/crxd/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/help_data.dat
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/nonvint_block_supervisor.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libspdlog.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libfmt.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/dsl.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/symtab.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/example
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/example/passive.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/example/expsyn.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/example/exp2syn.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/example/hh.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz/index.html
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz/css
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz/css/tree.css
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz/js
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz/js/d3.min.js
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ext/viz/js/tree.js
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/visitor.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ast.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/ode.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/nmodl/_nmodl.cpython-310-darwin.so
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libpywrapper.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/liblexer.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libsparse13.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libpyembed.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libcoreneuron-core.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libcodegen.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libutil.a
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/cache
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/cache/mechanism_range.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/non_owning_soa_identifier.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/data_handle.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/generic_data_handle.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/model_data_fwd.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnrandom.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocassrt.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/multicore.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnconf.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/wrap_sprintf.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/simeq.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ocmisc.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/multisplit.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/oc_ansi.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoclist.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/membfunc.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpidec.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnversionmacros.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/scoplib.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/sparse.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/membdef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton_struct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton/newton.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode/nrnneosm.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/bbsavestate.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nmodlmutex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/euler_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocdec.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/md2redef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocgetsym.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/euler.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cabvars.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/options.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpi.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnran123.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/CholmodSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdVector
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdDeque
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Core
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseLU
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/OrderingMethods
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/QtAlignedMalloc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Householder
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/PardisoSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseCore
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Jacobi
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Dense
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SPQRSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/QR
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Eigen
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseQR
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SVD
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Cholesky
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/UmfPackSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/IterativeLinearSolvers
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/LU
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Sparse
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Geometry
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SuperLUSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdList
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/MetisSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseCholesky
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Eigenvalues
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/PaStiXSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/CholmodSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/CholmodSupport/CholmodSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/blas.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapacke.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/Kernel.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/RealSvd2x2.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/Image.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapack.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapacke_mangling.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Reverse.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ConditionEstimator.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PermutationMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Assign.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MathFunctionsImpl.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseUnaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DiagonalMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/StlIterators.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/VectorBlock.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ReturnByValue.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Solve.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointRank2Update.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/Parallelizer.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArithmeticSequence.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Product.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/NonMPL2.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ReshapedHelper.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/BlasUtil.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/StaticAssert.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Constants.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/XprHelper.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/MKL_support.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Macros.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/DisableStupidWarnings.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/SymbolicIndex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ForwardDeclarations.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Memory.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Meta.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ConfigureVectorization.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/IntegralConstant.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ReenableStupidWarnings.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/IndexedViewHelper.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MatrixBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Stride.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Map.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ForceAlignedAccess.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/UnaryFunctors.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/TernaryFunctors.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/AssignmentFunctors.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/BinaryFunctors.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/StlFunctors.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/NullaryFunctors.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SelfCwiseBinaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/BandMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Inverse.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Assign_MKL.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Swap.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ProductEvaluators.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MapBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Matrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/EigenBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/StableNorm.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GenericPacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseBinaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Visitor.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseStorage.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DiagonalProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseUnaryView.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NoAlias.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseCoeffsBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PartialReduxEvaluator.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/IndexedView.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Fuzzy.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/TriangularMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/IO.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/CUDA
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/CUDA/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/Half.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/Settings.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/BFloat16.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/ConjHelper.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP/hcc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP/hcc/math_constants.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/InteropHeaders.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/TypeCasting.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/PacketMath.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MathFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/Complex.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Array.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SolverBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/AssignEvaluator.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Replicate.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CoreIterators.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArrayBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Block.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Dot.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PlainObjectBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SelfAdjointView.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GeneralProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SolveTriangular.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CoreEvaluators.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseNullaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/VectorwiseOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArrayWrapper.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/BooleanRedux.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Transpositions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NestByValue.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Ref.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Reshaped.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Transpose.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Redux.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NumTraits.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CommaInitializer.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GlobalFunctions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Random.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Diagonal.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseTernaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Select.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Utils.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_kernel_bmod.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_column_bmod.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_gemm_kernel.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_column_dfs.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_panel_dfs.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_relax_snode.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_panel_bmod.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Structs.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_pruneL.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Memory.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_pivotL.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLUImpl.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Ordering.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Eigen_Colamd.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Amd.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ArrayCwiseUnaryOps.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/CommonCwiseUnaryOps.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/BlockMethods.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ArrayCwiseBinaryOps.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/MatrixCwiseBinaryOps.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/IndexedViewMethods.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/CommonCwiseBinaryOps.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ReshapedMethods.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/MatrixCwiseUnaryOps.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/HouseholderSequence.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/Householder.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/BlockHouseholder.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PardisoSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PardisoSupport/PardisoSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSelfAdjointView.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/CompressedStorage.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseView.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseColEtree.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMatrixBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDiagonalProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseTriangularView.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseAssign.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparsePermutation.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCwiseUnaryOp.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMap.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDenseProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseRef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseFuzzy.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/MappedSparseMatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSolverBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseBlock.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/TriangularSolver.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCompressedBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseTranspose.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/AmbiVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseRedux.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseUtil.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDot.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Jacobi
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Jacobi/Jacobi.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SPQRSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/FullPivHouseholderQR.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/HouseholderQR.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/CompleteOrthogonalDecomposition.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/ColPivHouseholderQR.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/HouseholderQR_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseQR
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseQR/SparseQR.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/JacobiSVD_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/SVDBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/JacobiSVD.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/BDCSVD.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/UpperBidiagonalization.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LLT_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LDLT.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LLT.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/UmfPackSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/UmfPackSupport/UmfPackSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/PartialPivLU_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/InverseImpl.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/Determinant.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/arch
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/arch/InverseSize4.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/PartialPivLU.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/FullPivLU.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/AngleAxis.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/RotationBase.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/EulerAngles.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Hyperplane.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Homogeneous.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/AlignedBox.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Quaternion.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Umeyama.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Translation.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Scaling.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/OrthoMethods.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Rotation2D.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/arch
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/arch/Geometry_SIMD.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Transform.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/ParametrizedLine.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SuperLUSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SuperLUSupport/SuperLUSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/MetisSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/MetisSupport/MetisSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdList.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdDeque.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/details.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdVector.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky/SimplicialCholesky.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/EigenSolver.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealSchur.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/Tridiagonalization.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/HessenbergDecomposition.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexEigenSolver.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexSchur.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealQZ.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PaStiXSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PaStiXSupport/PaStiXSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/KLUSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/KLUSupport/KLUSupport.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/KLUSupport
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnapi.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnsemanticversion.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/spmatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ocfunc.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/section_fwd.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/row_view.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoc_membf.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/backtrace_utils.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnisaac.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/parse_with_deps.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnredef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cspredef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/dimplic.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoc.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpiuse.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/md1redef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrniv_mf.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrn_ansi.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/deflate.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/errcodes.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv/profiler_interface.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv/nrniv_decl.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/engine.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnconf.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/gpu
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/gpu/nrn_acc_manager.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/membfunc.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/register_mech.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mechanism.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech_mapping.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/eion.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/mod2c_core_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/cfile
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/cfile/cabvars.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/core
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/core/nrnmpi.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpidec.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpi.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/lib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/lib/nrnmpi.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpiuse.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/config.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/version_macros.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/neuron_version.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/coreneuron.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/multisend.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/have2want.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netpar.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/tnode.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netcon.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/partrans.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/tqueue.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netcvode.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn2core_direct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/mech_report.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/core2nrn_data_return.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/prcellstate.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_setup.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/output_spikes.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/lfp.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/setup_fornetcon.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_checkpoint.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/user_params.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrnsection_mapping.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_filehandler.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/mem_layout_util.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/phase1.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/report_event.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/report_handler.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/sonata_report_handler.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/nrnreport.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/phase2.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/vrecitem.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/utils_cuda.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrnmutdec.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/string_utils.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrn_assert.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrnoc_aux.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/progressbar
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/progressbar/progressbar.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/memory_utils.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/profile
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/profile/profiler_interface.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/lpt.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/offload.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/memory.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/units.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/utils.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/randoms
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/randoms/nrnran123.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrn_stats.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/ivocvect.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc/md2redef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc/md1redef.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/membrane_definitions.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/multicore.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/fast_imem.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/crout_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/errcodes.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/newton_struct.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/newton_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/ssimplic_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/sparse_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/apps
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/apps/corenrn_parameters.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/node_permute.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/cellorder.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/data_layout.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnassrt.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/spconfig.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/runge.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnoc_ml.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/mech_api.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/mcran4.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ssimplic_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocparse.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ssimplic.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/ReinterpretCtr.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/xlcfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/pgccfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/fujitsufeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/metalfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/gccfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/iccfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/open64features.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/sunprofeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/compilerfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/clangfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/crayfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/sse.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/msvcfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/openclfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/nvccfeatures.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/threefry.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional/Engine.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional/gsl_cbrng.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/philox.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/gsl_microrng.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/aes.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/array.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/MicroURNG.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/u01fixedpt.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/boxmuller.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/uniform.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/ars.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout/crout.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/sparse_thread.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/treeset.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cspmatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nmodl
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nmodl.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nmodl/nrnunits.lib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nmodl/nrnunits.lib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libcoreneuron-core.a
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrniv
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrniv/profiler_interface.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrniv/nrniv_decl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/engine.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrnconf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/gpu
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/gpu/nrn_acc_manager.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/membfunc.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/register_mech.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/mechanism.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/mech_mapping.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/eion.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/mech
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/mech/mod2c_core_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/mech/cfile
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mechanism/mech/cfile/cabvars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/core/nrnmpi.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/nrnmpidec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/nrnmpi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/lib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/lib/nrnmpi.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/mpi/nrnmpiuse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/config
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/config/config.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/config/version_macros.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/config/neuron_version.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/coreneuron.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/multisend.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/have2want.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/netpar.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/tnode.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/netcon.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/partrans.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/tqueue.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/network/netcvode.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/nrn2core_direct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/mech_report.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/core2nrn_data_return.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/prcellstate.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/nrn_setup.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/output_spikes.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/lfp.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/setup_fornetcon.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/nrn_checkpoint.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/user_params.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/nrnsection_mapping.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/nrn_filehandler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/mem_layout_util.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/phase1.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/reports
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/reports/report_event.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/reports/report_handler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/reports/sonata_report_handler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/reports/nrnreport.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/io/phase2.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/vrecitem.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/utils_cuda.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/nrnmutdec.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/string_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/nrn_assert.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/nrnoc_aux.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/progressbar
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/progressbar/progressbar.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/memory_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/profile
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/profile/profiler_interface.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/lpt.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/offload.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/units.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/utils.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/randoms
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/randoms/nrnran123.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/nrn_stats.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/utils/ivocvect.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrnoc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrnoc/md2redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/nrnoc/md1redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/membrane_definitions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/multicore.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/fast_imem.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath/crout_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath/errcodes.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath/newton_struct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath/newton_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath/ssimplic_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/sim/scopmath/sparse_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/apps
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/apps/corenrn_parameters.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/permute
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/permute/node_permute.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/permute/cellorder.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include//coreneuron/permute/data_layout.hpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/coreneuron/mod_func.c.pl
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/coreneuron/enginemech.cpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nmodl
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrniv-core
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/coreneuron/coreneuron.cpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libcorenrnmech_internal.dylib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/cache
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/cache/mechanism_range.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/non_owning_soa_identifier.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/data_handle.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/generic_data_handle.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/model_data_fwd.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnrandom.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocassrt.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/multicore.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnconf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/wrap_sprintf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/simeq.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ocmisc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/multisplit.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/oc_ansi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoclist.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/membfunc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpidec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnversionmacros.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/scoplib.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/sparse.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/membdef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton_struct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton/newton.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode/nrnneosm.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/bbsavestate.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nmodlmutex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/euler_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocdec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/md2redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocgetsym.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/euler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cabvars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/options.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnran123.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/CholmodSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdVector
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdDeque
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseLU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/OrderingMethods
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/QtAlignedMalloc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Householder
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/PardisoSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseCore
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Jacobi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Dense
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SPQRSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/QR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Eigen
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseQR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SVD
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Cholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/UmfPackSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/IterativeLinearSolvers
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/LU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Sparse
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Geometry
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SuperLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdList
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/MetisSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseCholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Eigenvalues
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/PaStiXSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/CholmodSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/CholmodSupport/CholmodSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/blas.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapacke.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/Kernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/RealSvd2x2.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/Image.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapack.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapacke_mangling.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Reverse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ConditionEstimator.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PermutationMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Assign.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MathFunctionsImpl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseUnaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DiagonalMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/StlIterators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/VectorBlock.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ReturnByValue.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Solve.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointRank2Update.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/Parallelizer.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArithmeticSequence.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Product.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/NonMPL2.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ReshapedHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/BlasUtil.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/StaticAssert.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Constants.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/XprHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/MKL_support.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Macros.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/DisableStupidWarnings.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/SymbolicIndex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ForwardDeclarations.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Meta.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ConfigureVectorization.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/IntegralConstant.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ReenableStupidWarnings.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/IndexedViewHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MatrixBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Stride.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Map.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ForceAlignedAccess.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/UnaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/TernaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/AssignmentFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/BinaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/StlFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/NullaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SelfCwiseBinaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/BandMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Inverse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Assign_MKL.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Swap.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ProductEvaluators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MapBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Matrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/EigenBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/StableNorm.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GenericPacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseBinaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Visitor.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseStorage.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DiagonalProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseUnaryView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NoAlias.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseCoeffsBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PartialReduxEvaluator.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/IndexedView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Fuzzy.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/TriangularMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/IO.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/CUDA
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/CUDA/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/Half.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/Settings.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/BFloat16.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/ConjHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP/hcc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP/hcc/math_constants.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/InteropHeaders.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Array.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SolverBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/AssignEvaluator.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Replicate.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CoreIterators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArrayBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Block.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Dot.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PlainObjectBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SelfAdjointView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GeneralProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SolveTriangular.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CoreEvaluators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseNullaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/VectorwiseOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArrayWrapper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/BooleanRedux.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Transpositions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NestByValue.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Ref.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Reshaped.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Transpose.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Redux.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NumTraits.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CommaInitializer.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GlobalFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Random.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Diagonal.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseTernaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Select.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_kernel_bmod.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_column_bmod.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_gemm_kernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_column_dfs.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_panel_dfs.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_relax_snode.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_panel_bmod.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Structs.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_pruneL.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_pivotL.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLUImpl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Ordering.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Eigen_Colamd.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Amd.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ArrayCwiseUnaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/CommonCwiseUnaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/BlockMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ArrayCwiseBinaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/MatrixCwiseBinaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/IndexedViewMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/CommonCwiseBinaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ReshapedMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/MatrixCwiseUnaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/HouseholderSequence.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/Householder.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/BlockHouseholder.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PardisoSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PardisoSupport/PardisoSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSelfAdjointView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/CompressedStorage.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseColEtree.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMatrixBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDiagonalProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseTriangularView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseAssign.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparsePermutation.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCwiseUnaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMap.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDenseProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseRef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseFuzzy.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/MappedSparseMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSolverBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseBlock.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/TriangularSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCompressedBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseTranspose.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/AmbiVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseRedux.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseUtil.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDot.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Jacobi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Jacobi/Jacobi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SPQRSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/FullPivHouseholderQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/HouseholderQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/CompleteOrthogonalDecomposition.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/ColPivHouseholderQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/HouseholderQR_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseQR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseQR/SparseQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/JacobiSVD_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/SVDBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/JacobiSVD.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/BDCSVD.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/UpperBidiagonalization.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LLT_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LDLT.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LLT.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/UmfPackSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/UmfPackSupport/UmfPackSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/PartialPivLU_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/InverseImpl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/Determinant.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/arch
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/arch/InverseSize4.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/PartialPivLU.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/FullPivLU.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/AngleAxis.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/RotationBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/EulerAngles.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Hyperplane.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Homogeneous.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/AlignedBox.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Quaternion.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Umeyama.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Translation.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Scaling.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/OrthoMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Rotation2D.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/arch
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/arch/Geometry_SIMD.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Transform.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/ParametrizedLine.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SuperLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SuperLUSupport/SuperLUSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/MetisSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/MetisSupport/MetisSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdList.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdDeque.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/details.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky/SimplicialCholesky.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/EigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealSchur.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/Tridiagonalization.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/HessenbergDecomposition.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexSchur.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealQZ.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PaStiXSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PaStiXSupport/PaStiXSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/KLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/KLUSupport/KLUSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/KLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnapi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnsemanticversion.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/spmatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ocfunc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/section_fwd.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/row_view.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoc_membf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/backtrace_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnisaac.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/parse_with_deps.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnredef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cspredef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/dimplic.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpiuse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/md1redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrniv_mf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrn_ansi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/deflate.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/errcodes.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv/profiler_interface.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv/nrniv_decl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/engine.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnconf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/gpu
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/gpu/nrn_acc_manager.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/membfunc.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/register_mech.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mechanism.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech_mapping.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/eion.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/mod2c_core_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/cfile
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/cfile/cabvars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/core/nrnmpi.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpidec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/lib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/lib/nrnmpi.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpiuse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/config.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/version_macros.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/neuron_version.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/coreneuron.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/multisend.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/have2want.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netpar.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/tnode.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netcon.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/partrans.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/tqueue.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netcvode.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn2core_direct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/mech_report.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/core2nrn_data_return.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/prcellstate.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_setup.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/output_spikes.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/lfp.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/setup_fornetcon.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_checkpoint.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/user_params.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrnsection_mapping.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_filehandler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/mem_layout_util.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/phase1.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/report_event.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/report_handler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/sonata_report_handler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/nrnreport.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/phase2.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/vrecitem.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/utils_cuda.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrnmutdec.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/string_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrn_assert.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrnoc_aux.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/progressbar
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/progressbar/progressbar.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/memory_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/profile
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/profile/profiler_interface.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/lpt.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/offload.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/units.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/utils.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/randoms
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/randoms/nrnran123.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrn_stats.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/ivocvect.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc/md2redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc/md1redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/membrane_definitions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/multicore.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/fast_imem.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/crout_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/errcodes.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/newton_struct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/newton_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/ssimplic_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/sparse_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/apps
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/apps/corenrn_parameters.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/node_permute.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/cellorder.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/data_layout.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnassrt.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/spconfig.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/runge.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnoc_ml.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/mech_api.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/mcran4.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ssimplic_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocparse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ssimplic.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/ReinterpretCtr.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/xlcfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/pgccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/fujitsufeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/metalfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/gccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/iccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/open64features.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/sunprofeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/compilerfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/clangfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/crayfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/sse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/msvcfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/openclfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/nvccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/threefry.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional/Engine.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional/gsl_cbrng.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/philox.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/gsl_microrng.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/aes.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/array.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/MicroURNG.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/u01fixedpt.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/boxmuller.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/uniform.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/ars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout/crout.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/sparse_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/treeset.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cspmatrix.h
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/stim.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/passive.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/expsyn.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/svclmp.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/exp2syn.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/netstim.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/hh.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/modfile/pattern.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/coreneuron/nrnivmodl_core_makefile
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrnivmodl-core
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrniv
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nocmodl
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/modlunit
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/libnrniv.dylib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/nrnmain.cpp
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrngui
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/neurondemo
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrnivmodl
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrnmech_makefile
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/sortspike
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/mkthreadsafe
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/nrnpyenv.sh
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/bin/set_nrnpyenv.sh
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/librxdmath.dylib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/hclass3.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/hoc.cpython-310-darwin.so
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/expect_hocerr.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/psection.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/metadata.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/morphml.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/xml2nrn.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/__init__.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/neuroml.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/rdxml.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/neuroml/biophysics.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/config.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/units.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/sections.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxdException.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/options.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/plugins.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxdsection.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/species.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxdmath.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rate.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/region.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/multiCompartmentReaction.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/constants.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/dimension3.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/section1d.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/plugins.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/rxdsection.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/multiCompartmentReaction.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/rangevar.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/rxdmath.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/reaction.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/rate.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/generalizedReaction.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/initializer.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/species.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/region.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/nodelist.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/rxdException.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/options.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/node.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/constants.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/rxd.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/geometry.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/dimension3.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/__pycache__/__init__.cpython-310.pyc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/section1d.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/export.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/initializer.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rangevar.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/geometry.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/rxd.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/generalizedReaction.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/nodelist.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/node.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/gui.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/rxd/reaction.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/_subclass.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_all.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__init__.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__init__.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__pycache__
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__pycache__/capture_stdout.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__pycache__/strtobool.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__pycache__/checkresult.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/__pycache__/__init__.cpython-310.pyc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/strtobool.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/capture_stdout.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/utils/checkresult.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_neuron.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_rxd.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_vector.cpython-310-pytest-7.4.2.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_vector.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_rxd.cpython-310-pytest-7.4.2.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_all.cpython-310-pytest-7.4.2.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_neuron.cpython-310-pytest-7.4.2.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/test_all.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/__pycache__/__init__.cpython-310.pyc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_neuron.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_vector.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/tests/test_rxd.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__init__.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/_config_params.py
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/gui.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/coreneuron.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/config.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/hclass3.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/units.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/nonvint_block_supervisor.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/psection.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/expect_hocerr.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/_config_params.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/doc.cpython-310.pyc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/__pycache__/__init__.cpython-310.pyc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/coreneuron.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/doc.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/setup_threejs.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/config.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/__init__.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/rangevar.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/plotshape.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui2/utilities.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/crxd
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/crxd/__init__.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/help_data.dat
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/gui.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/nonvint_block_supervisor.py
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/lib/python/neuron/help_data.dat
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/shape.cm2
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/helpdict
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/stdgui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/loadbal.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/family.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/thresh.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/attshape.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/corenrn.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/gatherv.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/shapebox.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/lincir
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/lincir/lincir1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/lincir/elmbase.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/lincir/linmech.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/lincir/lingraph.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/lincir.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/grapher.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/vplay.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mknrndll.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/inserter.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/impedanx.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/impratio.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/runfit.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/showmech.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/movierun.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/parcom.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/noload.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/vecwrap.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/prcellstate.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/nrngui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/funfit.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/wingroup.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/electrod.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/gategui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/properties.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/chanbild1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/kschanbg.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/const.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/ksgate.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/ksstate.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/kstgui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/sigmoid.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/kstrans.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/table.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/exp.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild/linoid.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/inhomofn.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/celmemb.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/celgeom.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/celbild1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/celset.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/celtopol.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/celmang.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/celbild/psubset.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mkcurve.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/single.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/pointgrp.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/subiter.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/single1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/atoltool.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/nrngui1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/impedanc.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/modlunit.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/artcel.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/netgui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/netdata.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/grstrlst.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/netready.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/spkplot.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/syntypes.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netbild/edgegui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/varmeth1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/chanbild.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/secanal.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/ppanal.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/artview.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/ncview.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/rcclasses.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/realcell.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/mviewgui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/parmsets.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/mviewxml.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/allpp.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/distinct.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/parmvals.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/distinctparm.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/allcell.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/treeview.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview/mview1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/logax.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/pcchdir.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/stdrun.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/fitparm.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/mulfit1.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/eonefunc.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/eonerun.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/clampfit.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/optwrap.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/protorun.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/e_actpot.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/e_y.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/eparmlst.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/e_norm.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/e_xy.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mulfit/eoneprim.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/macload.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/netparmpi.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/pointbsr.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/binfo.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/stdlib.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/read_nts.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/import3d_sec.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/read_morphml.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/read_nlcda3.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/read_nlcda.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/import3d_gui.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/import3d/read_swc.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/pointman.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hoc/mview.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/prologue.id
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/nrn.defaults.in
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/cleanup
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/shape.cm1
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/auditscripts
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/auditscripts/saveaudit
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/auditscripts/retrieve.sh
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/auditscripts/hocaudit.sh
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/auditscripts/gettarname
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/auditscripts/notes
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/nrnunits.lib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/hocload.sh
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/hh.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/singhh.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/singhhchan.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/nomodel.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dynchan.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/pyramid.nrn
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dynclamp.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/demo.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/nacaex.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/nachan.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/release.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/camchan.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/capump.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/cachan1.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/invlfire.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/khhchan.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/cabpump.mod
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/pyramid.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/cycle.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/d3init.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dend3.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/demo.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dend3
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dend3/control.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dend3/syn3.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dend3/dend3.nrn
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync/init.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync/start.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync/demosync.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync/spkplot.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync/cell.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/sync/synchronize.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/dynclamp.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/singhh.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/hh.ses
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/reconst.hoc
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/testca.hoc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/nrnunits.lib
-- Installing: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/nrn.defaults
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/lib/cleanup
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/cache
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/cache/mechanism_range.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/non_owning_soa_identifier.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/data_handle.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/container/generic_data_handle.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron/model_data_fwd.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnrandom.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocassrt.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/multicore.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnconf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/wrap_sprintf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/simeq.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ocmisc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/multisplit.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/oc_ansi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoclist.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/membfunc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpidec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnversionmacros.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/scoplib.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/sparse.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/membdef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/neuron.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton_struct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton/newton.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode/nrnneosm.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/bbsavestate.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nmodlmutex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/euler_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocdec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/md2redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocgetsym.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/euler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cabvars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/options.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnran123.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/CholmodSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdVector
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdDeque
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseLU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/OrderingMethods
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/QtAlignedMalloc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Householder
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/PardisoSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseCore
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Jacobi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Dense
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SPQRSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/QR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Eigen
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseQR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SVD
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Cholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/UmfPackSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/IterativeLinearSolvers
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/LU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Sparse
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Geometry
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SuperLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/StdList
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/MetisSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/SparseCholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/Eigenvalues
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/PaStiXSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/CholmodSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/CholmodSupport/CholmodSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/blas.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapacke.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/Kernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/RealSvd2x2.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/Image.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapack.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/misc/lapacke_mangling.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Reverse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ConditionEstimator.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PermutationMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Assign.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MathFunctionsImpl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseUnaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DiagonalMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/StlIterators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/VectorBlock.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ReturnByValue.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Solve.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointRank2Update.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixVector_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/Parallelizer.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixMatrixTriangular.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/GeneralMatrixVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixVector_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixVector_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixMatrix_BLAS.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularSolverVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/TriangularMatrixMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/products/SelfadjointMatrixMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArithmeticSequence.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Product.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/NonMPL2.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ReshapedHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/BlasUtil.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/StaticAssert.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Constants.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/XprHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/MKL_support.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Macros.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/DisableStupidWarnings.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/SymbolicIndex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ForwardDeclarations.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/Meta.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ConfigureVectorization.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/IntegralConstant.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/ReenableStupidWarnings.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/util/IndexedViewHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MatrixBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Stride.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Map.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ForceAlignedAccess.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/UnaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/TernaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/AssignmentFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/BinaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/StlFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/functors/NullaryFunctors.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SelfCwiseBinaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/BandMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Inverse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Assign_MKL.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Swap.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ProductEvaluators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/MapBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Matrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/EigenBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/StableNorm.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GenericPacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseBinaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Visitor.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseStorage.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DiagonalProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseUnaryView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NoAlias.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseCoeffsBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PartialReduxEvaluator.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/IndexedView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Fuzzy.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/TriangularMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/IO.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SSE/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/GPU/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/MSA/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/CUDA
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/CUDA/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/ZVector/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/Half.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/Settings.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/BFloat16.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctionsFwd.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/GenericPacketMathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/Default/ConjHelper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX512/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SVE/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP/hcc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/HIP/hcc/math_constants.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AVX/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/SyclMemoryModel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/InteropHeaders.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/SYCL/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/GeneralBlockPanelKernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/TypeCasting.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/NEON/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/PacketMath.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MathFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProductMMA.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/MatrixProductCommon.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/arch/AltiVec/Complex.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Array.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SolverBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/AssignEvaluator.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Replicate.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CoreIterators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArrayBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Block.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Dot.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/PlainObjectBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SelfAdjointView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GeneralProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/SolveTriangular.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CoreEvaluators.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseNullaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/VectorwiseOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/ArrayWrapper.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/BooleanRedux.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Transpositions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NestByValue.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Ref.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Reshaped.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Transpose.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Redux.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/NumTraits.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CommaInitializer.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/GlobalFunctions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Random.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Diagonal.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/DenseBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/CwiseTernaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Core/Select.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_kernel_bmod.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_column_bmod.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_gemm_kernel.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_column_dfs.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_panel_dfs.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_relax_snode.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_panel_bmod.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Structs.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_pruneL.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_copy_to_ucol.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_Memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_pivotL.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLUImpl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseLU/SparseLU_SupernodalMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Ordering.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Eigen_Colamd.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/OrderingMethods/Amd.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ArrayCwiseUnaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/CommonCwiseUnaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/BlockMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ArrayCwiseBinaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/MatrixCwiseBinaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/IndexedViewMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/CommonCwiseBinaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/ReshapedMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/plugins/MatrixCwiseUnaryOps.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/HouseholderSequence.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/Householder.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Householder/BlockHouseholder.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PardisoSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PardisoSupport/PardisoSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSelfAdjointView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/CompressedStorage.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseColEtree.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMatrixBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDiagonalProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseTriangularView.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseAssign.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparsePermutation.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCwiseUnaryOp.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseMap.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDenseProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseRef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseFuzzy.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/MappedSparseMatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSparseProductWithPruning.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseSolverBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseBlock.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/TriangularSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseCompressedBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseTranspose.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/AmbiVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseRedux.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/ConservativeSparseSparseProduct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseUtil.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCore/SparseDot.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Jacobi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Jacobi/Jacobi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SPQRSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SPQRSupport/SuiteSparseQRSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/FullPivHouseholderQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/HouseholderQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/CompleteOrthogonalDecomposition.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/ColPivHouseholderQR_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/ColPivHouseholderQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/QR/HouseholderQR_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseQR
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseQR/SparseQR.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/JacobiSVD_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/SVDBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/JacobiSVD.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/BDCSVD.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SVD/UpperBidiagonalization.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LLT_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LDLT.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Cholesky/LLT.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/UmfPackSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/UmfPackSupport/UmfPackSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/BasicPreconditioners.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IncompleteCholesky.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/SolveWithGuess.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IncompleteLUT.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/LeastSquareConjugateGradient.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/ConjugateGradient.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/BiCGSTAB.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/IterativeLinearSolvers/IterativeSolverBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/PartialPivLU_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/InverseImpl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/Determinant.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/arch
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/arch/InverseSize4.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/PartialPivLU.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/LU/FullPivLU.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/AngleAxis.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/RotationBase.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/EulerAngles.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Hyperplane.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Homogeneous.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/AlignedBox.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Quaternion.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Umeyama.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Translation.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Scaling.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/OrthoMethods.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Rotation2D.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/arch
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/arch/Geometry_SIMD.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/Transform.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Geometry/ParametrizedLine.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SuperLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SuperLUSupport/SuperLUSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/MetisSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/MetisSupport/MetisSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdList.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdDeque.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/details.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/StlSupport/StdVector.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky/SimplicialCholesky_impl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/SparseCholesky/SimplicialCholesky.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/GeneralizedEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/EigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealSchur_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealSchur.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexSchur_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/Tridiagonalization.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/HessenbergDecomposition.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/ComplexSchur.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/SelfAdjointEigenSolver.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/RealQZ.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/Eigenvalues/MatrixBaseEigenvalues.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PaStiXSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/PaStiXSupport/PaStiXSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/KLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/src/KLUSupport/KLUSupport.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Eigen/KLUSupport
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnapi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrncvode.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnsemanticversion.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/spmatrix.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ocfunc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/section_fwd.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/row_view.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoc_membf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/backtrace_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnisaac.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/parse_with_deps.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnredef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cspredef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/dimplic.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hoc.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/newton.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnmpiuse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/md1redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrniv_mf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrn_ansi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/deflate.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/errcodes.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv/profiler_interface.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrniv/nrniv_decl.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/engine.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnconf.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/gpu
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/gpu/nrn_acc_manager.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/membfunc.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/register_mech.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mechanism.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech_mapping.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/eion.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/mod2c_core_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/cfile
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mechanism/mech/cfile/cabvars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/core
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/core/nrnmpi.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpidec.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpi.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/lib
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/lib/nrnmpi.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/mpi/nrnmpiuse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/config.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/version_macros.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/config/neuron_version.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/coreneuron.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/multisend.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/have2want.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netpar.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/tnode.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netcon.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/partrans.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/tqueue.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/network/netcvode.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn2core_direct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/mech_report.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/core2nrn_data_return.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/prcellstate.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_setup.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/output_spikes.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/lfp.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/setup_fornetcon.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_checkpoint.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/user_params.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrnsection_mapping.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/nrn_filehandler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/mem_layout_util.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/phase1.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/report_event.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/report_handler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/sonata_report_handler.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/reports/nrnreport.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/io/phase2.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/vrecitem.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/utils_cuda.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrnmutdec.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/string_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrn_assert.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrnoc_aux.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/progressbar
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/progressbar/progressbar.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/memory_utils.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/profile
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/profile/profiler_interface.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/lpt.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/offload.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/memory.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/units.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/utils.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/randoms
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/randoms/nrnran123.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/nrn_stats.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/utils/ivocvect.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc/md2redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/nrnoc/md1redef.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/membrane_definitions.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/multicore.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/fast_imem.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/crout_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/errcodes.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/newton_struct.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/newton_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/ssimplic_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/sim/scopmath/sparse_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/apps
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/apps/corenrn_parameters.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/node_permute.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/cellorder.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/coreneuron/permute/data_layout.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnassrt.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/spconfig.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/runge.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/nrnoc_ml.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/mech_api.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/mcran4.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ssimplic_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/hocparse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/ssimplic.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/ReinterpretCtr.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/xlcfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/pgccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/fujitsufeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/metalfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/gccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/iccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/open64features.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/sunprofeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/compilerfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/clangfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/crayfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/sse.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/msvcfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/openclfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/features/nvccfeatures.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/threefry.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional/Engine.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/conventional/gsl_cbrng.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/philox.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/gsl_microrng.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/aes.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/array.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/MicroURNG.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/u01fixedpt.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/boxmuller.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/uniform.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/Random123/ars.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/crout/crout.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/sparse_thread.hpp
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/treeset.h
-- Up-to-date: /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/include/cspmatrix.h
.: replacing existing signature
.: replacing existing signature
.: replacing existing signature
.: replacing existing signature
.: replacing existing signature
"install" of folder "nrn" of folder "cellular" of folder "hpc" of folder "J980020" of folder "P163887" of folder "0" of folder "builds" of folder "gitlab-runner" of folder "Users"
35:57: execution error: Finder got an error: AppleEvent timed out. (-1712)
/usr/bin/xcrun
/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release
cfiles =
Mod files: "cabpump.mod" "cachan1.mod" "camchan.mod" "capump.mod" "invlfire.mod" "khhchan.mod" "nacaex.mod" "nachan.mod" "release.mod"

Creating 'arm64' directory for .o files.

MODOBJS= ./cabpump.o ./cachan1.o ./camchan.o ./capump.o ./invlfire.o ./khhchan.o ./nacaex.o ./nachan.o ./release.o
 -> Compiling mod_func.cpp
 -> NMODL ../cabpump.mod
 -> NMODL ../cachan1.mod
 -> NMODL ../camchan.mod
Translating cabpump.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/cabpump.cpp
Translating cachan1.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/cachan1.cpp
Translating camchan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/camchan.cpp
Thread Safe
Notice: Assignment to the GLOBAL variable, "vol", is not thread safe
Thread Safe
 -> NMODL ../capump.mod
 -> NMODL ../invlfire.mod
 -> NMODL ../khhchan.mod
Translating invlfire.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/invlfire.cpp
Translating khhchan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/khhchan.cpp
Translating capump.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/capump.cpp
Thread Safe
Thread Safe
Thread Safe
 -> NMODL ../nacaex.mod
 -> NMODL ../nachan.mod
 -> NMODL ../release.mod
 -> Compiling cabpump.cpp
Translating nacaex.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/nacaex.cpp
Translating nachan.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/nachan.cpp
Translating release.mod into /Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install/share/nrn/demo/release/arm64/release.cpp
Thread Safe
Thread Safe
Thread Safe
 -> Compiling cachan1.cpp
 -> Compiling camchan.cpp
 -> Compiling capump.cpp
 -> Compiling invlfire.cpp
 -> Compiling khhchan.cpp
 -> Compiling nacaex.cpp
 -> Compiling nachan.cpp
 -> Compiling release.cpp
 => LINKING shared library ./libnrnmech.dylib
ld: warning: -undefined dynamic_lookup may not work with chained fixups
 => LINKING executable ./special LDFLAGS are:         /opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib/libpython3.10.dylib -Wl,-rpath,/opt/homebrew/opt/python@3.10/Frameworks/Python.framework/Versions/3.10/lib /opt/homebrew/Cellar/open-mpi/4.1.4_2/lib/libmpi.dylib -Wl,-rpath,/opt/homebrew/Cellar/open-mpi/4.1.4_2/lib
Successfully created arm64/special
NEURON -- VERSION + HEAD (0e83c98+) 2023-10-20
Duke, Yale, and the BlueBrain Project -- Copyright 1984-2022
See http://neuron.yale.edu/neuron/credits

Additional mechanisms from files
 "cabpump.mod" "cachan1.mod" "camchan.mod" "capump.mod" "invlfire.mod" "khhchan.mod" "nacaex.mod" "nachan.mod" "release.mod"
$ export PATH=${INSTALL_DIR}/bin:${PATH}
$ export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python/
$ if [[ -f "${INSTALL_DIR}/bin/nrn-enable-sanitizer" ]]; then
$ echo --- bin/nrn-enable-sanitizer ---
--- bin/nrn-enable-sanitizer ---
$ cat bin/nrn-enable-sanitizer
#!/usr/bin/env bash
prefix="${NRNHOME:-/Users/gitlab-runner/builds/0/P163887/J980020/hpc/cellular/nrn/install}"
export NRN_SANITIZER_PRELOAD_VAR=DYLD_INSERT_LIBRARIES
export NRN_SANITIZER_PRELOAD_VAL=/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/lib/clang/14.0.0/lib/darwin/libclang_rt.asan_osx_dynamic.dylib
if [[ "$1" == "--preload" ]]; then
  shift
  if [[ "$1" == "python" ]]; then
    # nrn-enable-sanitizer --preload python is used in the CI, but for it to
    # work on macOS we need to substitute the real Python binary in place of any
    # shims. This is done from CMake, and PYTHON_EXECUTABLE contains the real
    # binary.
    shift
    DYLD_INSERT_LIBRARIES=/App

spack-setup.txt

test-neuron-nmodl-intel-legacy.txt

test-neuron-nmodl-intel-shared.txt

test-neuron-nmodl-nvhpc-acc-legacy.txt

test-neuron-nmodl-nvhpc-acc-shared.txt

test-neuron-nmodl-nvhpc-omp-legacy.txt

test-neuron-nmodl-nvhpc-omp.txt