Created
July 20, 2015 22:15
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| #get genetic risk score | |
| read.table("/hrsshare/alz_context/pgs/alz_nc.profile",header=TRUE)->score | |
| score[,c(2,6)]->score | |
| names(score)<-c("subjectID","polygenic_score") | |
| #rand fat files | |
| load("/hrsshare/v2_hrs_linked.Rdata") | |
| x[,c("subjectID","hhidpn","family","raracem","rahispan")]->ids | |
| ids[ids$raracem=="1.white/caucasian" & ids$rahispan=="0. not hispanic",]->ids | |
| merge(ids,score)->x |
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