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default 07:08:27.803973-0700 runningboardd _resolveProcessWithIdentifier sysctl pid 13961 is euid 501
default 07:08:27.804017-0700 runningboardd Unable to obtain process properties from launchd for pid=13961
default 07:08:27.807630-0700 runningboardd Resolved pid 13961 to [executable<R(501)>:13961]
default 07:08:27.810751-0700 runningboardd [executable<R(501)>:13961] This process will not be managed.
default 07:08:27.810796-0700 runningboardd Now tracking process: [executable<R(501)>:13961]
default 07:08:27.819797-0700 runningboardd Acquiring assertion targeting executable<R(501)> from originator [daemon<com.apple.coreservices.launchservicesd>:142] with description <RBSAssertionDescriptor; foregroundApp:13961; ID: 413-142-2622; target: 13961> attributes = {
<RBSDomainAttribute: 0x7fd9dd752590; domain: com.apple.launchservicesd; name: RoleUserInteractiveNonFocal; sourceEnvironment: 0x0>;
}
default 07:08:27.821249-0700 runningboardd [executable<R(501)>:13961] Ignoring jetsam update because this process is not memory-managed
default 07:08:27.821353-0700 runningboardd [executable<R(501)>:13961] Ignoring resume because this process is not lifecycle managed
default 07:08:27.821461-0700 runningboardd [executable<R(501)>:13961] Set darwin role to: UserInteractiveNonFocal
default 07:08:27.821562-0700 runningboardd [executable<R(501)>:13961] Ignoring GPU update because this process is not GPU managed
default 07:08:27.829732-0700 runningboardd Acquiring assertion targeting executable<R(501)> from originator [daemon<com.apple.coreservices.launchservicesd>:142] with description <RBSAssertionDescriptor; foregroundApp:13961; ID: 413-142-2623; target: 13961> attributes = {
<RBSDomainAttribute: 0x7fd9dd4412a0; domain: com.apple.launchservicesd; name: RoleUserInteractiveNonFocal; sourceEnvironment: 0x0>;
}
default 07:08:27.849931-0700 distnoted register name: AppleColorPreferencesChangedNotification object: kCFNotificationAnyObject token: f4242 pid: 13961
default 07:08:27.853202-0700 distnoted register name: AppleAppSleepPreferencesChangedNotification object: kCFNotificationAnyObject token: f4243 pid: 13961
default 07:08:27.854650-0700 R FRONTLOGGING: version 1
default 07:08:27.854676-0700 R Registering, pid=13961
default 07:08:27.857148-0700 R CHECKIN: pid=13961
default 07:08:27.864638-0700 launchservicesd CHECKIN:0x0-0x2de2de 13961 org.R-project.R
default 07:08:27.865039-0700 R CHECKEDIN: pid=13961 asn=0x0-0x2de2de foreground=1
default 07:08:27.879955-0700 tccd PID[203] is checking access for target PID[13961]
default 07:08:27.892539-0700 R Registered, pid=13961 ASN=0x0,0x2de2de
default 07:08:27.892714-0700 R Registered, pid=13961 cgConnectionID=b3f47
default 07:08:27.895185-0700 R BringForward: pid=13961 asn=0x0-0x2de2de bringForward=1 foreground=1 uiElement=0 launchedByLS=1 modifiersCount=1 allDisabled=0
default 07:08:27.895267-0700 R BringFrontModifier: pid=13961 asn=0x0-0x2de2de Modifier 0 hideAfter=0 hideOthers=0 dontMakeFrontmost=0 mouseDown=0/0 seed=0/0
default 07:08:27.895792-0700 R BringForward: pid=13961 asn=0x0-0x2de2de
default 07:08:27.896368-0700 launchservicesd SETFRONT: pid=13961 asn=0x-0x2de2de foreground=1 oldFrontPid=1196 oldFrontASN=0x-0x139298
default 07:08:27.895930-0700 R SetFrontProcess: asn=0x0-0x2de2de options=0
default 07:08:27.897743-0700 runningboardd Acquiring assertion targeting executable<R(501)> from originator [daemon<com.apple.coreservices.launchservicesd>:142] with description <RBSAssertionDescriptor; frontmost:13961; ID: 413-142-2624; target: 13961> attributes = {
<RBSDomainAttribute: 0x7fd9dd539b30; domain: com.apple.launchservicesd; name: RoleUserInteractiveFocal; sourceEnvironment: 0x0>;
}
default 07:08:27.903261-0700 distnoted register name: AppleInterfaceMenuBarHidingChangedNotification object: kCFNotificationAnyObject token: f4244 pid: 13961
default 07:08:27.903506-0700 distnoted register name: __NSFakeMemoryPressureNotification object: kCFNotificationAnyObject token: f4245 pid: 13961
default 07:08:27.903669-0700 distnoted register name: ApplePrivateInterfaceThemeChangedNotification object: kCFNotificationAnyObject token: f4246 pid: 13961
default 07:08:27.900294-0700 runningboardd [executable<R(501)>:13961] Ignoring jetsam update because this process is not memory-managed
default 07:08:27.900535-0700 runningboardd [executable<R(501)>:13961] Set darwin role to: UserInteractiveFocal
default 07:08:27.901237-0700 runningboardd [executable<R(501)>:13961] Ignoring GPU update because this process is not GPU managed
default 07:08:27.909821-0700 R Current system appearance, (HLTB: 2), (SLS: 1)
default 07:08:27.910697-0700 distnoted register name: AppleAquaColorVariantChanged object: kCFNotificationAnyObject token: f4247 pid: 13961
default 07:08:27.914607-0700 R Post-registration system appearance: (HLTB: 2)
default 07:08:27.914458-0700 distnoted register name: AXInterfaceIncreaseContrastStatusDidChange object: kCFNotificationAnyObject token: f424a pid: 13961
default 07:08:27.914616-0700 distnoted register name: AXInterfaceClassicInvertColorStatusDidChange object: kCFNotificationAnyObject token: f424b pid: 13961
default 07:08:27.914689-0700 distnoted register name: AXInterfaceDifferentiateWithoutColorStatusDidChange object: kCFNotificationAnyObject token: f424c pid: 13961
default 07:08:27.914758-0700 distnoted register name: AXInterfaceReduceTransparencyStatusDidChange object: kCFNotificationAnyObject token: f424d pid: 13961
default 07:08:27.914827-0700 distnoted register name: AXInterfaceReduceMotionStatusDidChange object: kCFNotificationAnyObject token: f424e pid: 13961
default 07:08:27.914895-0700 distnoted register name: com.apple.universalaccess.screenPolarityDidChange object: kCFNotificationAnyObject token: f424f pid: 13961
default 07:08:27.914972-0700 distnoted register name: com.apple.universalaccess.screenGrayscaleDidChange object: kCFNotificationAnyObject token: f4250 pid: 13961
default 07:08:27.915043-0700 distnoted register name: AppleInterfaceThemeChangedNotification object: kCFNotificationAnyObject token: f4252 pid: 13961
default 07:08:27.915374-0700 distnoted register name: com.apple.universalaccess.VoiceOverSettingsDidChange object: kCFNotificationAnyObject token: f4254 pid: 13961
default 07:08:27.915524-0700 distnoted register name: UniversalAccessDomainAssistiveControlSettingsDidChangeNotification object: kCFNotificationAnyObject token: f4256 pid: 13961
default 07:08:27.915607-0700 distnoted register name: AppleNoRedisplayAppearancePreferenceChanged object: kCFNotificationAnyObject token: f425c pid: 13961
default 07:08:27.915791-0700 distnoted register name: AppleNoRedisplayAppearancePreferenceChanged object: kCFNotificationAnyObject token: f425d pid: 13961
default 07:08:27.915872-0700 distnoted register name: com.apple.AppleSpacesSwitchOnActivate object: kCFNotificationAnyObject token: f425e pid: 13961
default 07:08:27.935355-0700 distnoted register name: NSEventResetDefaults object: com.apple.AppKit.NSEventResetDefaults token: f4264 pid: 13961
default 07:08:27.935448-0700 distnoted register name: com.apple.AppleMultitouchTrackpadDomainDidChangeNotification object: kCFNotificationAnyObject token: f4265 pid: 13961
default 07:08:27.935522-0700 distnoted register name: AppleEnableSwipeNavigateWithScrollsDidChangeNotification object: kCFNotificationAnyObject token: f4266 pid: 13961
default 07:08:27.935595-0700 distnoted register name: AppleEnableMouseSwipeNavigateWithScrollsDidChangeNotification object: kCFNotificationAnyObject token: f4267 pid: 13961
default 07:08:27.935672-0700 distnoted register name: com.apple.xctest.FakeForceTouchDevice object: org.R-project.R token: f4268 pid: 13961
default 07:08:27.939806-0700 distnoted register name: AppleAquaAntiAliasingChanged object: kCFNotificationAnyObject token: f426b pid: 13961
default 07:08:27.948931-0700 R NSApp cache appearance:
-NSRequiresAquaSystemAppearance: 0
-appearance: (null)
-effectiveAppearance: <NSCompositeAppearance: 0x600000c5dc80
(
"<NSDarkAquaAppearance: 0x600000c5db00>",
"<NSSystemAppearance: 0x600000c5db80>"
)>
default 07:08:27.964627-0700 distnoted register name: com.apple.Carbon.TISNotifySelectedKeyboardInputSourceChanged object: kCFNotificationAnyObject token: f427e pid: 13961
default 07:08:27.967228-0700 distnoted register name: AppleAquaScrollBarVariantChanged object: kCFNotificationAnyObject token: f4281 pid: 13961
default 07:08:27.982933-0700 distnoted register name: com.apple.nsquiet_safe_quit_give_reason object: org.R-project.R token: f428e pid: 13961
default 07:08:27.985867-0700 distnoted register name: NSPersistentUIBitmapEncryptionKeyDidChange object: kCFNotificationAnyObject token: f4292 pid: 13961
default 07:08:28.034507-0700 distnoted register name: AppleLanguagePreferencesChangedNotification object: kCFNotificationAnyObject token: f42bc pid: 13961
default 07:08:28.037847-0700 R 0x107bb2000 - [frame=0x107bd4100, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x107cf6000)
default 07:08:28.037868-0700 R 0x107bb2000 - [frame=0x107bd4100, main=1] FrameLoader::transitionToCommitted: Clearing provisional document loader (m_provisionalDocumentLoader=0x107cf6000)
default 07:08:28.037883-0700 R 0x107bb2000 - [frame=0x107bd4100, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x0)
default 07:08:28.045572-0700 R 0x107cf6000 - DocumentLoader::startLoadingMainResource: Returning empty document (frame = 0x107bd4100, main = 1)
default 07:08:28.045624-0700 R 0x107bb2000 - [frame=0x107bd4100, main=1] FrameLoader::setState: main frame load completed
default 07:08:28.045655-0700 R Memory usage info dump at MainFrameLoadCompleted:
default 07:08:28.045670-0700 R document_count: 1
default 07:08:28.045686-0700 R phys_footprint: 6594560
default 07:08:28.045697-0700 R virtual_size: 6097145856
default 07:08:28.045711-0700 R resident_size: 19005440
default 07:08:28.045723-0700 R compressed: 0
default 07:08:28.045761-0700 R javascript_gc_heap_capacity: 32768
default 07:08:28.045821-0700 R javascript_gc_heap_extra_memory_size: 0
default 07:08:28.045872-0700 R backforward_cache_page_count: 0
default 07:08:28.045926-0700 R internal: 6598656
default 07:08:28.046087-0700 R 0x107b9d000 - PerformanceMonitor::measureCPUUsageInActivityState: Process is using 74.5% CPU in state: VisibleNonActive
default 07:08:28.082794-0700 R 0x107b8b000 - [frame=0x107bd4200, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x107cf6c00)
default 07:08:28.083122-0700 R 0x107b8b000 - [frame=0x107bd4200, main=1] FrameLoader::transitionToCommitted: Clearing provisional document loader (m_provisionalDocumentLoader=0x107cf6c00)
default 07:08:28.083139-0700 R 0x107b8b000 - [frame=0x107bd4200, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x0)
default 07:08:28.083584-0700 R 0x107cf6c00 - DocumentLoader::startLoadingMainResource: Returning empty document (frame = 0x107bd4200, main = 1)
default 07:08:28.083612-0700 R 0x107b8b000 - [frame=0x107bd4200, main=1] FrameLoader::setState: main frame load completed
default 07:08:28.083640-0700 R Memory usage info dump at MainFrameLoadCompleted:
default 07:08:28.083901-0700 R document_count: 2
default 07:08:28.083919-0700 R phys_footprint: 6729728
default 07:08:28.083931-0700 R virtual_size: 6097145856
default 07:08:28.083945-0700 R resident_size: 19177472
default 07:08:28.083957-0700 R compressed: 0
default 07:08:28.083970-0700 R javascript_gc_heap_capacity: 32768
default 07:08:28.083982-0700 R javascript_gc_heap_extra_memory_size: 0
default 07:08:28.083996-0700 R backforward_cache_page_count: 0
default 07:08:28.084440-0700 R internal: 6733824
default 07:08:28.105479-0700 distnoted register name: com.apple.userkeyequivalentsdidchange object: kCFNotificationAnyObject token: f42da pid: 13961
default 07:08:28.114631-0700 R 0x107b85000 - [frame=0x107bd4300, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x107cf7800)
default 07:08:28.114650-0700 R 0x107b85000 - [frame=0x107bd4300, main=1] FrameLoader::transitionToCommitted: Clearing provisional document loader (m_provisionalDocumentLoader=0x107cf7800)
default 07:08:28.114665-0700 R 0x107b85000 - [frame=0x107bd4300, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x0)
default 07:08:28.115164-0700 R 0x107cf7800 - DocumentLoader::startLoadingMainResource: Returning empty document (frame = 0x107bd4300, main = 1)
default 07:08:28.115195-0700 R 0x107b85000 - [frame=0x107bd4300, main=1] FrameLoader::setState: main frame load completed
default 07:08:28.115225-0700 R Memory usage info dump at MainFrameLoadCompleted:
default 07:08:28.115246-0700 R document_count: 3
default 07:08:28.115259-0700 R phys_footprint: 6967296
default 07:08:28.115298-0700 R virtual_size: 6097162240
default 07:08:28.115380-0700 R resident_size: 19546112
default 07:08:28.115422-0700 R compressed: 0
default 07:08:28.115492-0700 R javascript_gc_heap_capacity: 32768
default 07:08:28.115539-0700 R javascript_gc_heap_extra_memory_size: 0
default 07:08:28.115596-0700 R backforward_cache_page_count: 0
default 07:08:28.115670-0700 R internal: 6971392
default 07:08:28.157777-0700 R 0x107b81000 - [frame=0x107bd4400, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x107cf8400)
default 07:08:28.157794-0700 R 0x107b81000 - [frame=0x107bd4400, main=1] FrameLoader::transitionToCommitted: Clearing provisional document loader (m_provisionalDocumentLoader=0x107cf8400)
default 07:08:28.157850-0700 R 0x107b81000 - [frame=0x107bd4400, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x0)
default 07:08:28.158503-0700 R 0x107cf8400 - DocumentLoader::startLoadingMainResource: Returning empty document (frame = 0x107bd4400, main = 1)
default 07:08:28.158534-0700 R 0x107b81000 - [frame=0x107bd4400, main=1] FrameLoader::setState: main frame load completed
default 07:08:28.158562-0700 R Memory usage info dump at MainFrameLoadCompleted:
default 07:08:28.158648-0700 R document_count: 4
default 07:08:28.158826-0700 R phys_footprint: 7016448
default 07:08:28.158842-0700 R virtual_size: 6097162240
default 07:08:28.158904-0700 R resident_size: 19595264
default 07:08:28.159121-0700 R compressed: 0
default 07:08:28.159140-0700 R javascript_gc_heap_capacity: 32768
default 07:08:28.159154-0700 R javascript_gc_heap_extra_memory_size: 0
default 07:08:28.159219-0700 R backforward_cache_page_count: 0
default 07:08:28.159851-0700 R internal: 7020544
default 07:08:28.254761-0700 distnoted register name: AppleNoRedisplayAppearancePreferenceChanged object: kCFNotificationAnyObject token: f43ef pid: 13961
default 07:08:28.254933-0700 R RDocumentController<RDocumentController: 0x60000376a780>.init
default 07:08:28.255204-0700 R <RDocumentController: 0x60000376a780> autosave ENABLED
fault 07:08:28.275387-0700 R <private>
fault 07:08:28.275571-0700 R <private>
default 07:08:28.278969-0700 R PackageInstaller: awakeFromNib
default 07:08:28.280739-0700 R PackageInstaller.awakeFromNib: found previous R at /Library/Frameworks/R.framework/Versions/3.6/Resources
default 07:08:28.349551-0700 R MiscPrefPane.updatePreferences: 'ask'
default 07:08:28.350836-0700 R MiscPrefPane.updatePreferences: 'ask'
default 07:08:28.375221-0700 distnoted register name: NSColorSwatchesChangedDistributedNotification object: kCFNotificationAnyObject token: f4496 pid: 13961
default 07:08:28.467840-0700 R RController<RController: 0x7fc540632c70>.windowWillCloseNotifications:<NSColorPanel: 0x7fc5406943b0>
default 07:08:28.468250-0700 R - no window found; make RConsole key window
default 07:08:28.476713-0700 distnoted register name: com.apple.KeyboardUIModeDidChange object: kCFNotificationAnyObject token: f44d1 pid: 13961
default 07:08:28.479975-0700 distnoted register name: NSFavoriteStylesChanged object: kCFNotificationAnyObject token: f44d2 pid: 13961
default 07:08:28.482342-0700 distnoted register name: NSWindowForceInvalidateShadow object: kCFNotificationAnyObject token: f44d3 pid: 13961
default 07:08:28.541630-0700 R RTextView: awakeFromNib <RTextView: 0x7fc54102b600>
Frame = {{0.00, 0.00}, {550.00, 412.00}}, Bounds = {{0.00, 0.00}, {550.00, 412.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {550.00, 412.00}, MaxSize = {1098.00, 10000000.00}
default 07:08:28.542506-0700 R - delegate: <RController: 0x7fc540632c70>
default 07:08:28.545192-0700 R RController.awakeFromNib
default 07:08:28.545619-0700 R RTextView: set console flag to yes (<RTextView: 0x7fc54102b600>
Frame = {{0.00, 0.00}, {550.00, 412.00}}, Bounds = {{0.00, 0.00}, {550.00, 412.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {550.00, 412.00}, MaxSize = {1098.00, 10000000.00}
)
default 07:08:28.553246-0700 distnoted register name: NSServicesChangedNotification object: kCFNotificationAnyObject token: f4503 pid: 13961
default 07:08:28.606883-0700 R - working directory setup timer
default 07:08:28.607028-0700 R - load preferences
default 07:08:28.607162-0700 R RController.updatePreferences
default 07:08:28.617697-0700 R - done, preferences updated
default 07:08:28.618171-0700 R - init R_LIBS
default 07:08:28.618274-0700 R - set APP VERSION (1.72) and REVISION (7841)
default 07:08:28.618329-0700 R - set R home
default 07:08:28.735563-0700 R /Library/Frameworks/R.framework/Resources
default 07:08:28.735682-0700 R - set locale
default 07:08:28.735794-0700 R CFLocaleGetIdentifier="en_US"
default 07:08:28.735846-0700 R - setting LANG=en_US.UTF-8
default 07:08:28.735902-0700 R - init R
default 07:08:28.736027-0700 R - other widgets
default 07:08:28.736114-0700 R - setup stdout/err grabber
default 07:08:28.736777-0700 R - set cwd and load history
default 07:08:28.736954-0700 R RController.doLoadHistory
default 07:08:28.737027-0700 R - history file to load: .Rapp.history
default 07:08:28.737117-0700 R RController.doClearHistory
default 07:08:28.737258-0700 R - cleared history, reload with: .Rapp.history
default 07:08:28.764678-0700 R - awake is done
default 07:08:28.781145-0700 R - initalizing R
default 07:08:28.781213-0700 R REngine.activate: starting R ...
default 07:08:28.796767-0700 R SignalReady: pid=13961 asn=0x0-0x2de2de
default 07:08:28.800144-0700 R SIGNAL: pid=13961 asn=0x0x-0x3007198
default 07:08:28.807138-0700 distnoted register name: com.apple.Carbon.TISNotifyHandwritingInputSourceChanged object: kCFNotificationAnyObject token: f457c pid: 13961
default 07:08:28.807617-0700 distnoted register name: AppleTextInputMenuExtraDidLoadNotification object: kCFNotificationAnyObject token: f457d pid: 13961
default 07:08:28.807796-0700 distnoted register name: AppleKeyboardPreferencesSelectedItemsChangedNotification object: kCFNotificationAnyObject token: f457e pid: 13961
default 07:08:28.807878-0700 distnoted register name: com.apple.Carbon.TISNotifyEnabledKeyboardInputSourcesChanged object: kCFNotificationAnyObject token: f457f pid: 13961
default 07:08:28.807928-0700 distnoted register name: AppleLanguagePreferencesChangedNotification object: kCFNotificationAnyObject token: f4580 pid: 13961
default 07:08:28.807970-0700 distnoted register name: com.apple.Carbon.TISNotifyHandwritingInputSourceChanged object: kCFNotificationAnyObject token: f4581 pid: 13961
default 07:08:28.808032-0700 distnoted register name: com.apple.Carbon.TISNotifyIronwoodAutoEnableChanged object: kCFNotificationAnyObject token: f4582 pid: 13961
default 07:08:28.808095-0700 distnoted register name: AppleInstalledInputSourcesChangedNotification object: kCFNotificationAnyObject token: f4583 pid: 13961
default 07:08:28.808161-0700 distnoted register name: AppleEnabledInputSourcesChangedNotification object: kCFNotificationAnyObject token: f4584 pid: 13961
default 07:08:28.808309-0700 distnoted register name: AppleSelectedInputSourcesChangedNotification object: kCFNotificationAnyObject token: f4585 pid: 13961
default 07:08:28.808362-0700 distnoted register name: com.apple.Carbon.TISNotifyEnabledHandwritingLanguagesChanged object: kCFNotificationAnyObject token: f4586 pid: 13961
default 07:08:28.808410-0700 distnoted register name: com.apple.Carbon.TISNotifySelectedHandwritingLanguageChanged object: kCFNotificationAnyObject token: f4587 pid: 13961
default 07:08:28.808475-0700 distnoted register name: AppleRomanSwitchSettingChangedNotification object: kCFNotificationAnyObject token: f4588 pid: 13961
default 07:08:28.826391-0700 distnoted register name: AXInterfaceIncreaseContrastStatusDidChange object: kCFNotificationAnyObject token: f4589 pid: 13961
default 07:08:28.826476-0700 distnoted register name: AppleDatePreferencesChangedNotification object: kCFNotificationAnyObject token: f458a pid: 13961
default 07:08:28.826561-0700 distnoted register name: AppleTimePreferencesChangedNotification object: kCFNotificationAnyObject token: f458b pid: 13961
default 07:08:28.826673-0700 distnoted register name: AppleNumberPreferencesChangedNotification object: kCFNotificationAnyObject token: f458c pid: 13961
default 07:08:28.826843-0700 distnoted register name: AppleTextBehaviorPreferencesChangedNotification object: kCFNotificationAnyObject token: f458d pid: 13961
default 07:08:28.826922-0700 distnoted register name: AppleKeyboardMenuPreferencesChangedNotification object: kCFNotificationAnyObject token: f458e pid: 13961
default 07:08:28.826987-0700 distnoted register name: AppleKeyboardPreferencesChangedNotification object: kCFNotificationAnyObject token: f458f pid: 13961
default 07:08:28.827055-0700 distnoted register name: AppleSelectedInputMethodPasteboardInvalidNotification object: kCFNotificationAnyObject token: f4590 pid: 13961
default 07:08:28.952195-0700 distnoted register name: CGFontOverrideSettingsDidChange object: kCFNotificationAnyObject token: f45d9 pid: 13961
default 07:08:28.976218-0700 distnoted register name: AppleShowScrollBarsSettingChanged object: kCFNotificationAnyObject token: f45db pid: 13961
default 07:08:28.976480-0700 distnoted register name: AppleGestureScrollSettingChanged object: kCFNotificationAnyObject token: f45dc pid: 13961
default 07:08:28.980003-0700 distnoted register name: NSSecondaryDisplayVisChanged object: kCFNotificationAnyObject token: f45dd pid: 13961
default 07:08:28.980763-0700 distnoted register name: AXInterfaceReduceTransparencyStatusDidChange object: kCFNotificationAnyObject token: f45de pid: 13961
default 07:08:28.983598-0700 distnoted register name: AppleAquaColorVariantChanged object: kCFNotificationAnyObject token: f45df pid: 13961
default 07:08:28.983685-0700 distnoted register name: AppleInterfaceThemeChangedNotification object: kCFNotificationAnyObject token: f45e0 pid: 13961
default 07:08:28.983755-0700 distnoted register name: AppleAquaAntiAliasingChanged object: kCFNotificationAnyObject token: f45e1 pid: 13961
default 07:08:29.014292-0700 hidd Connection added: IOHIDEventSystemConnection uuid:7FAD2C74-126A-4B14-BE31-0CF65AAE3240 pid:13961 process:R type:Passive entitlements:0x0 caller:HIToolbox: ___GetIOHIDEventSystemClient_block_invoke + 26 attributes:(null) state:0x0 events:0 mask:0x0
default 07:08:29.015971-0700 distnoted register name: com.apple.sessionDidMoveOnConsole object: kCFNotificationAnyObject token: f45e5 pid: 13961
default 07:08:29.016057-0700 distnoted register name: com.apple.sessionDidMoveOffConsole object: kCFNotificationAnyObject token: f45e7 pid: 13961
default 07:08:29.174731-0700 R RController.handleAppleEvent is called
default 07:08:29.174873-0700 R - 1 files to open
default 07:08:29.175757-0700 R appending /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/Data_PIpeline.R to open after launching
default 07:08:29.181032-0700 R Read options: 0 -- URL: <private> -- purposeID: A5781515-8340-4F46-95AB-4CE9F1D094D1 -- claimID: 0CD448D3-4367-4DAD-9CDE-5FF5609411F1
default 07:08:29.184082-0700 R Claim 0CD448D3-4367-4DAD-9CDE-5FF5609411F1 granted in client
default 07:08:29.184109-0700 R Claim 0CD448D3-4367-4DAD-9CDE-5FF5609411F1 invoked in client
default 07:08:29.228972-0700 R REngine.activate: R started with no error
default 07:08:29.229042-0700 R - load R code for R.app
default 07:08:29.229161-0700 R - loading code from '/Applications/R.app/Contents/Resources/GUI-tools.R'
default 07:08:29.229221-0700 R REngine.executeString:"try(local(source("/Applications/R.app/Contents/Resources/GUI-tools.R",local=TRUE,echo=FALSE,verbose=FALSE,encoding='UTF-8',keep.source=FALSE)))"
default 07:08:29.230130-0700 R RController.setStatusLine: "executing: try(local(source("/Applications/R.app/Contents/Resources/GUI-tools.R",local=TRUE,echo=FALSE,verbose=FALSE,encoding='UTF-8',keep.source=FALSE)))"
default 07:08:29.242233-0700 R RDocument(<RDocument: 0x600001349d60>) init
default 07:08:29.242609-0700 distnoted register name: com.apple.LaunchServices.ShowAllExtensionsChangedToTrue object: kCFNotificationAnyObject token: f45e9 pid: 13961
default 07:08:29.242710-0700 distnoted register name: com.apple.LaunchServices.ShowAllExtensionsChangedToFalse object: kCFNotificationAnyObject token: f45ea pid: 13961
default 07:08:29.249356-0700 R RDocument.loadDataRepresentation loading 48341 bytes of data and docType R Source File
default 07:08:29.250459-0700 R Adding presenter 13F7B605-A369-4FFD-B7A6-EF424CA7B751 for URL: <private>
default 07:08:29.251182-0700 R Adding presenter 13F7B605-A369-4FFD-B7A6-EF424CA7B751 for URL: <private>
default 07:08:29.251420-0700 R RDocument.makeWindowControllers: creating RDocumentWinCtrl
default 07:08:29.251756-0700 R RDocumentWinCtrl<<RDocumentWinCtrl: 0x7fc542479310>>.initWithNibName:RDocument
default 07:08:29.255626-0700 R 0x107b7c000 - [frame=0x107bd4500, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x107cf0000)
default 07:08:29.255651-0700 R 0x107b7c000 - [frame=0x107bd4500, main=1] FrameLoader::transitionToCommitted: Clearing provisional document loader (m_provisionalDocumentLoader=0x107cf0000)
default 07:08:29.255666-0700 R 0x107b7c000 - [frame=0x107bd4500, main=1] FrameLoader::setProvisionalDocumentLoader: Setting provisional document loader (m_provisionalDocumentLoader=0x0)
default 07:08:29.256597-0700 R 0x107cf0000 - DocumentLoader::startLoadingMainResource: Returning empty document (frame = 0x107bd4500, main = 1)
default 07:08:29.256633-0700 R 0x107b7c000 - [frame=0x107bd4500, main=1] FrameLoader::setState: main frame load completed
default 07:08:29.256664-0700 R Memory usage info dump at MainFrameLoadCompleted:
default 07:08:29.256684-0700 R document_count: 5
default 07:08:29.256700-0700 R phys_footprint: 71438336
default 07:08:29.256983-0700 R virtual_size: 6174351360
default 07:08:29.257003-0700 R resident_size: 87183360
default 07:08:29.257019-0700 R compressed: 0
default 07:08:29.257035-0700 R javascript_gc_heap_capacity: 32768
default 07:08:29.257051-0700 R javascript_gc_heap_extra_memory_size: 0
default 07:08:29.257066-0700 R backforward_cache_page_count: 0
default 07:08:29.257313-0700 R internal: 65945600
default 07:08:29.264564-0700 distnoted register name: com.apple.sharedfilelist.change object: com.apple.LSSharedFileList.RecentDocuments token: f45fc pid: 13961
default 07:08:29.264712-0700 distnoted register name: com.apple.sharedfilelist.launch object: kCFNotificationAnyObject token: f45fd pid: 13961
default 07:08:29.267819-0700 distnoted register name: com.apple.sharedfilelist.change object: com.apple.LSSharedFileList.ApplicationRecentDocuments token: f45fe pid: 13961
default 07:08:29.267940-0700 distnoted register name: com.apple.sharedfilelist.launch object: kCFNotificationAnyObject token: f45ff pid: 13961
default 07:08:29.287949-0700 R <RDocumentWinCtrl: 0x7fc542479310> fileEncoding (<RDocument: 0x600001349d60> gives 4)
default 07:08:29.288211-0700 R <RDocumentWinCtrl: 0x7fc542479310> fileEncoding (<RDocument: 0x600001349d60> gives 4)
default 07:08:29.288635-0700 R RTextView: awakeFromNib <RScriptEditorTextView: 0x7fc5418fb000>
Frame = {{0.00, 0.00}, {509.00, 398.00}}, Bounds = {{0.00, 0.00}, {509.00, 398.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {507.00, 398.00}, MaxSize = {1012.00, 10000000.00}
default 07:08:29.288706-0700 R - delegate: <RDocumentWinCtrl: 0x7fc542479310>
default 07:08:29.288800-0700 R RScriptEditorTextView: awakeFromNib <<RScriptEditorTextView: 0x7fc5418fb000>
Frame = {{0.00, 0.00}, {509.00, 398.00}}, Bounds = {{0.00, 0.00}, {509.00, 398.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {507.00, 398.00}, MaxSize = {1012.00, 10000000.00}
>
default 07:08:29.289300-0700 R RScriptEditorTextView:awakeFromNib set scrollView
default 07:08:29.293082-0700 R - tiHelpSearch=<NSToolbarItem: 0x600001375cc0> identifier = "RETI Help Search", view=<NSView: 0x7fc542437e30>
default 07:08:29.293657-0700 R - tiFnList=<NSToolbarItem: 0x600001375c20> identifier = "RETI FnList", view=<NSView: 0x7fc542446f10>
default 07:08:29.293942-0700 R toolbar:<NSToolbar: 0x600000c45f80> itemForItemIdentifier:RETI Save Document
default 07:08:29.294569-0700 R toolbar:<NSToolbar: 0x600000c45f80> itemForItemIdentifier:RETI FnList
default 07:08:29.294625-0700 R toolbar:<NSToolbar: 0x600000c45f80> itemForItemIdentifier:RETI Help Search
default 07:08:29.304563-0700 R RDocumentWinCtrl.setStatusLine: ""
default 07:08:29.305202-0700 R RScriptEditorTextView: setTabStops <<RScriptEditorTextView: 0x7fc5418fb000>
Frame = {{0.00, 0.00}, {509.00, 398.00}}, Bounds = {{0.00, 0.00}, {509.00, 398.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {507.00, 398.00}, MaxSize = {1012.00, 10000000.00}
>
default 07:08:29.305896-0700 R RScriptEditorTextView: textStorageDidProcessEditing <<RScriptEditorTextView: 0x7fc5418fb000>
Frame = {{0.00, 0.00}, {509.00, 398.00}}, Bounds = {{0.00, 0.00}, {509.00, 398.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {507.00, 398.00}, MaxSize = {1012.00, 10000000.00}
> with mask 1
default 07:08:29.309536-0700 R RDocumentWinCtrl(<RDocumentWinCtrl: 0x7fc542479310>).windowDidLoad
default 07:08:29.310127-0700 R - load document contents into textView
default 07:08:29.310192-0700 R RDocument.loadInitialContents: loading
default 07:08:29.310226-0700 R - try to auto-detect file encoding
default 07:08:29.310646-0700 R - new string contents (48338 chars) for window controller <RDocumentWinCtrl: 0x7fc542479310>
default 07:08:29.310765-0700 R <RDocumentWinCtrl: 0x7fc542479310> setFileEncoding: 4 (doc <RDocument: 0x600001349d60>)
default 07:08:29.310856-0700 R - setFileEncoding: 4
default 07:08:29.310981-0700 R <RDocumentWinCtrl: 0x7fc542479310> fileEncoding (<RDocument: 0x600001349d60> gives 4)
default 07:08:29.311116-0700 R <RDocumentWinCtrl: 0x7fc542479310> fileEncoding (<RDocument: 0x600001349d60> gives 4)
default 07:08:29.353015-0700 R RScriptEditorTextView: textStorageDidProcessEditing <<RScriptEditorTextView: 0x7fc5418fb000>
Frame = {{0.00, 0.00}, {509.00, 398.00}}, Bounds = {{0.00, 0.00}, {509.00, 398.00}}
Horizontally resizable: NO, Vertically resizable: YES
MinSize = {507.00, 398.00}, MaxSize = {1012.00, 10000000.00}
> with mask 3
default 07:08:29.353481-0700 R RDocumentWinCtrl: textViewDidChangeSelection and calls currentFunctionHint
default 07:08:29.353784-0700 R RDocumentWinCtrl: textViewDidChangeSelection and calls currentFunctionHint
default 07:08:29.354029-0700 R RDocumentWinCtrl - received notification about search type change to 10
default 07:08:29.363739-0700 R - scan document for functions
default 07:08:29.363795-0700 R - set up line numbering for text view
default 07:08:29.366060-0700 R RDocumentWinCtrl.functionReset
default 07:08:29.367424-0700 R - reset done
default 07:08:29.367547-0700 R - windowDidLoad is done
default 07:08:29.377410-0700 R RDocumentWinCtrl: textViewDidChangeSelection and calls currentFunctionHint
default 07:08:29.378571-0700 hidd Connection added: IOHIDEventSystemConnection uuid:BF58D26A-D995-419D-AB32-AF5E831645C9 pid:13961 process:R type:Passive entitlements:0x0 caller:HIServices: ___GetIOHIDEventSystemClient_block_invoke + 26 attributes:(null) state:0x0 events:0 mask:0x0
default 07:08:29.381462-0700 R <PKDiscoveryDriver:0x60000060cc60> created discovery driver
default 07:08:29.381571-0700 R [d <private>] <PKHost:0x6000037a1340> Beginning discovery for flags: 0, point: multiple
default 07:08:29.381768-0700 R <PKDiscoveryDriver:0x60000060cb40> created discovery driver
default 07:08:29.381829-0700 R [d <private>] <PKHost:0x6000037a1340> Beginning discovery for flags: 0, point: com.apple.FinderSync
default 07:08:29.393323-0700 R RController: textViewDidChangeSelection
default 07:08:29.435452-0700 R RTextView: parserContextForPosition: 17, line start: 0
default 07:08:29.436716-0700 R RTextView: parserContextForPosition: 35, line start: 19
default 07:08:29.437041-0700 R RTextView: parserContextForPosition: 51, line start: 37
default 07:08:29.437333-0700 R RTextView: parserContextForPosition: 63, line start: 53
default 07:08:29.437515-0700 R RTextView: parserContextForPosition: 78, line start: 65
default 07:08:29.437731-0700 R RTextView: parserContextForPosition: 93, line start: 80
default 07:08:29.437995-0700 R RTextView: parserContextForPosition: 110, line start: 95
default 07:08:29.438173-0700 R RTextView: parserContextForPosition: 129, line start: 112
default 07:08:29.438780-0700 R RTextView: parserContextForPosition: 198, line start: 131
default 07:08:29.438906-0700 R RTextView: parserContextForPosition: 197, line start: 131
default 07:08:29.438976-0700 R RTextView: parserContextForPosition: 196, line start: 131
default 07:08:29.439017-0700 R RTextView: parserContextForPosition: 195, line start: 131
default 07:08:29.439071-0700 R RTextView: parserContextForPosition: 194, line start: 131
default 07:08:29.439115-0700 R RTextView: parserContextForPosition: 193, line start: 131
default 07:08:29.439148-0700 R RTextView: parserContextForPosition: 192, line start: 131
default 07:08:29.439177-0700 R RTextView: parserContextForPosition: 191, line start: 131
default 07:08:29.439205-0700 R RTextView: parserContextForPosition: 190, line start: 131
default 07:08:29.439285-0700 R RTextView: parserContextForPosition: 189, line start: 131
default 07:08:29.439325-0700 R RTextView: parserContextForPosition: 188, line start: 131
default 07:08:29.439522-0700 R RTextView: parserContextForPosition: 187, line start: 131
default 07:08:29.439567-0700 R RTextView: parserContextForPosition: 186, line start: 131
default 07:08:29.439779-0700 R RTextView: parserContextForPosition: 185, line start: 131
default 07:08:29.439820-0700 R RTextView: parserContextForPosition: 184, line start: 131
default 07:08:29.439850-0700 R RTextView: parserContextForPosition: 183, line start: 131
default 07:08:29.439929-0700 R RTextView: parserContextForPosition: 182, line start: 131
default 07:08:29.439968-0700 R RTextView: parserContextForPosition: 181, line start: 131
default 07:08:29.440370-0700 R RTextView: parserContextForPosition: 180, line start: 131
default 07:08:29.440438-0700 R RTextView: parserContextForPosition: 179, line start: 131
default 07:08:29.440552-0700 R RTextView: parserContextForPosition: 178, line start: 131
default 07:08:29.440639-0700 R RTextView: parserContextForPosition: 177, line start: 131
default 07:08:29.440730-0700 R RTextView: parserContextForPosition: 176, line start: 131
default 07:08:29.440817-0700 R RTextView: parserContextForPosition: 175, line start: 131
default 07:08:29.440850-0700 R RTextView: parserContextForPosition: 174, line start: 131
default 07:08:29.440920-0700 R RTextView: parserContextForPosition: 173, line start: 131
default 07:08:29.440953-0700 R RTextView: parserContextForPosition: 172, line start: 131
default 07:08:29.441018-0700 R RTextView: parserContextForPosition: 171, line start: 131
default 07:08:29.441049-0700 R RTextView: parserContextForPosition: 170, line start: 131
default 07:08:29.441076-0700 R RTextView: parserContextForPosition: 169, line start: 131
default 07:08:29.441142-0700 R RTextView: parserContextForPosition: 168, line start: 131
default 07:08:29.441186-0700 R RTextView: parserContextForPosition: 167, line start: 131
default 07:08:29.441248-0700 R RTextView: parserContextForPosition: 166, line start: 131
default 07:08:29.441277-0700 R RTextView: parserContextForPosition: 165, line start: 131
default 07:08:29.441342-0700 R RTextView: parserContextForPosition: 164, line start: 131
default 07:08:29.441426-0700 R RTextView: parserContextForPosition: 163, line start: 131
default 07:08:29.441505-0700 R RTextView: parserContextForPosition: 162, line start: 131
default 07:08:29.441612-0700 R RTextView: parserContextForPosition: 161, line start: 131
default 07:08:29.441720-0700 R RTextView: parserContextForPosition: 160, line start: 131
default 07:08:29.441800-0700 R RTextView: parserContextForPosition: 159, line start: 131
default 07:08:29.441894-0700 R RTextView: parserContextForPosition: 158, line start: 131
default 07:08:29.441973-0700 R RTextView: parserContextForPosition: 157, line start: 131
default 07:08:29.442050-0700 R RTextView: parserContextForPosition: 156, line start: 131
default 07:08:29.442188-0700 R RTextView: parserContextForPosition: 155, line start: 131
default 07:08:29.442692-0700 R RTextView: parserContextForPosition: 154, line start: 131
default 07:08:29.442725-0700 R RTextView: parserContextForPosition: 153, line start: 131
default 07:08:29.442754-0700 R RTextView: parserContextForPosition: 152, line start: 131
default 07:08:29.442780-0700 R RTextView: parserContextForPosition: 148, line start: 131
default 07:08:29.443727-0700 R RTextView: parserContextForPosition: 258, line start: 200
default 07:08:29.443777-0700 R RTextView: parserContextForPosition: 257, line start: 200
default 07:08:29.443809-0700 R RTextView: parserContextForPosition: 256, line start: 200
default 07:08:29.443835-0700 R RTextView: parserContextForPosition: 255, line start: 200
default 07:08:29.444245-0700 R RTextView: parserContextForPosition: 254, line start: 200
default 07:08:29.444339-0700 R RTextView: parserContextForPosition: 253, line start: 200
default 07:08:29.444370-0700 R RTextView: parserContextForPosition: 252, line start: 200
default 07:08:29.444399-0700 R RTextView: parserContextForPosition: 251, line start: 200
default 07:08:29.444643-0700 R RTextView: parserContextForPosition: 250, line start: 200
default 07:08:29.444680-0700 R RTextView: parserContextForPosition: 249, line start: 200
default 07:08:29.444709-0700 R RTextView: parserContextForPosition: 248, line start: 200
default 07:08:29.444736-0700 R RTextView: parserContextForPosition: 247, line start: 200
default 07:08:29.444762-0700 R RTextView: parserContextForPosition: 246, line start: 200
default 07:08:29.444789-0700 R RTextView: parserContextForPosition: 245, line start: 200
default 07:08:29.444816-0700 R RTextView: parserContextForPosition: 244, line start: 200
default 07:08:29.445806-0700 R RTextView: parserContextForPosition: 243, line start: 200
default 07:08:29.446192-0700 R RTextView: parserContextForPosition: 242, line start: 200
default 07:08:29.446304-0700 R RTextView: parserContextForPosition: 241, line start: 200
default 07:08:29.446412-0700 R RTextView: parserContextForPosition: 240, line start: 200
default 07:08:29.446542-0700 R RTextView: parserContextForPosition: 239, line start: 200
default 07:08:29.446574-0700 R RTextView: parserContextForPosition: 238, line start: 200
default 07:08:29.446602-0700 R RTextView: parserContextForPosition: 237, line start: 200
default 07:08:29.446629-0700 R RTextView: parserContextForPosition: 236, line start: 200
default 07:08:29.446655-0700 R RTextView: parserContextForPosition: 235, line start: 200
default 07:08:29.446681-0700 R RTextView: parserContextForPosition: 234, line start: 200
default 07:08:29.446707-0700 R RTextView: parserContextForPosition: 233, line start: 200
default 07:08:29.450246-0700 R RTextView: parserContextForPosition: 232, line start: 200
default 07:08:29.450288-0700 R RTextView: parserContextForPosition: 231, line start: 200
default 07:08:29.450316-0700 R RTextView: parserContextForPosition: 230, line start: 200
default 07:08:29.450344-0700 R RTextView: parserContextForPosition: 229, line start: 200
default 07:08:29.450370-0700 R RTextView: parserContextForPosition: 228, line start: 200
default 07:08:29.450396-0700 R RTextView: parserContextForPosition: 227, line start: 200
default 07:08:29.450422-0700 R RTextView: parserContextForPosition: 226, line start: 200
default 07:08:29.450447-0700 R RTextView: parserContextForPosition: 225, line start: 200
default 07:08:29.450473-0700 R RTextView: parserContextForPosition: 224, line start: 200
default 07:08:29.450499-0700 R RTextView: parserContextForPosition: 223, line start: 200
default 07:08:29.450525-0700 R RTextView: parserContextForPosition: 222, line start: 200
default 07:08:29.450550-0700 R RTextView: parserContextForPosition: 221, line start: 200
default 07:08:29.450576-0700 R RTextView: parserContextForPosition: 220, line start: 200
default 07:08:29.450601-0700 R RTextView: parserContextForPosition: 219, line start: 200
default 07:08:29.454009-0700 R [d <private>] <PKHost:0x6000037a1340> Completed discovery. Final # of matches: 21
default 07:08:29.454099-0700 R <PKDiscoveryDriver:0x60000060cc60> delivering update to host (21 plugins)
default 07:08:29.455765-0700 R [d <private>] <PKHost:0x6000037a1340> Completed discovery. Final # of matches: 3
default 07:08:29.455831-0700 R <PKDiscoveryDriver:0x60000060cb40> delivering update to host (3 plugins)
default 07:08:29.456341-0700 R RTextView: parserContextForPosition: 218, line start: 200
default 07:08:29.456378-0700 R RTextView: parserContextForPosition: 217, line start: 200
default 07:08:29.456408-0700 R RTextView: parserContextForPosition: 214, line start: 200
default 07:08:29.457174-0700 R RTextView: parserContextForPosition: 319, line start: 260
default 07:08:29.457257-0700 R RTextView: parserContextForPosition: 318, line start: 260
default 07:08:29.457326-0700 R RTextView: parserContextForPosition: 317, line start: 260
default 07:08:29.457768-0700 R RTextView: parserContextForPosition: 316, line start: 260
default 07:08:29.457926-0700 R RTextView: parserContextForPosition: 315, line start: 260
default 07:08:29.458461-0700 R RTextView: parserContextForPosition: 314, line start: 260
default 07:08:29.460225-0700 R RTextView: parserContextForPosition: 313, line start: 260
default 07:08:29.460705-0700 R <PKDiscoveryDriver:0x60000060cb40> installing watchers for continuous discovery
default 07:08:29.460923-0700 distnoted register name: com.apple.LaunchServices.pluginsregistered object: kCFNotificationAnyObject token: f468a pid: 13961
default 07:08:29.461035-0700 distnoted register name: com.apple.LaunchServices.pluginsunregistered object: kCFNotificationAnyObject token: f468b pid: 13961
default 07:08:29.461221-0700 R RTextView: parserContextForPosition: 312, line start: 260
default 07:08:29.461256-0700 R RTextView: parserContextForPosition: 311, line start: 260
default 07:08:29.461285-0700 R RTextView: parserContextForPosition: 310, line start: 260
default 07:08:29.461313-0700 R RTextView: parserContextForPosition: 309, line start: 260
default 07:08:29.461339-0700 R RTextView: parserContextForPosition: 308, line start: 260
default 07:08:29.461366-0700 R RTextView: parserContextForPosition: 307, line start: 260
default 07:08:29.462141-0700 R RTextView: parserContextForPosition: 306, line start: 260
default 07:08:29.462173-0700 R RTextView: parserContextForPosition: 305, line start: 260
default 07:08:29.462202-0700 R RTextView: parserContextForPosition: 304, line start: 260
default 07:08:29.462589-0700 R RTextView: parserContextForPosition: 303, line start: 260
default 07:08:29.462621-0700 R RTextView: parserContextForPosition: 302, line start: 260
default 07:08:29.462650-0700 R RTextView: parserContextForPosition: 301, line start: 260
default 07:08:29.462677-0700 R RTextView: parserContextForPosition: 300, line start: 260
default 07:08:29.462702-0700 R RTextView: parserContextForPosition: 299, line start: 260
default 07:08:29.462728-0700 R RTextView: parserContextForPosition: 298, line start: 260
default 07:08:29.462754-0700 R RTextView: parserContextForPosition: 297, line start: 260
default 07:08:29.463068-0700 R RTextView: parserContextForPosition: 296, line start: 260
default 07:08:29.463099-0700 R RTextView: parserContextForPosition: 295, line start: 260
default 07:08:29.463126-0700 R RTextView: parserContextForPosition: 294, line start: 260
default 07:08:29.463152-0700 R RTextView: parserContextForPosition: 293, line start: 260
default 07:08:29.463179-0700 R RTextView: parserContextForPosition: 292, line start: 260
default 07:08:29.463205-0700 R RTextView: parserContextForPosition: 291, line start: 260
default 07:08:29.463231-0700 R RTextView: parserContextForPosition: 290, line start: 260
default 07:08:29.463707-0700 R RTextView: parserContextForPosition: 289, line start: 260
default 07:08:29.463737-0700 R RTextView: parserContextForPosition: 288, line start: 260
default 07:08:29.463766-0700 R RTextView: parserContextForPosition: 287, line start: 260
default 07:08:29.463792-0700 R RTextView: parserContextForPosition: 286, line start: 260
default 07:08:29.463818-0700 R RTextView: parserContextForPosition: 285, line start: 260
default 07:08:29.463844-0700 R RTextView: parserContextForPosition: 284, line start: 260
default 07:08:29.463870-0700 R RTextView: parserContextForPosition: 283, line start: 260
default 07:08:29.464359-0700 R RTextView: parserContextForPosition: 282, line start: 260
default 07:08:29.464463-0700 R RTextView: parserContextForPosition: 281, line start: 260
default 07:08:29.464497-0700 R RTextView: parserContextForPosition: 280, line start: 260
default 07:08:29.464524-0700 R RTextView: parserContextForPosition: 276, line start: 260
default 07:08:29.464756-0700 R RTextView: parserContextForPosition: 336, line start: 321
default 07:08:29.465341-0700 R RTextView: parserContextForPosition: 355, line start: 338
default 07:08:29.465565-0700 R RTextView: parserContextForPosition: 372, line start: 357
default 07:08:29.465778-0700 R RTextView: parserContextForPosition: 386, line start: 374
default 07:08:29.466003-0700 R RTextView: parserContextForPosition: 433, line start: 389
default 07:08:29.466345-0700 R RTextView: parserContextForPosition: 432, line start: 389
default 07:08:29.466381-0700 R RTextView: parserContextForPosition: 431, line start: 389
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default 07:08:29.586996-0700 runningboardd Resolved XPC Service com.google.GoogleDrive.FinderSyncAPIExtension (FinderSyncAPIExtension.appex) with host pid 13961, variant 2, scope 1, pid 13966, and euid 501
default 07:08:29.736242-0700 R [u 3BBFE944-6FF8-4AA6-AFF0-F0123581E1F6:m 1536BA8D-5E1E-4B27-82C0-10996F2EC8B1] [<private>(<private>)] Begin using sent as euid = 501, uid = 501, (persona not available)
default 07:08:29.737047-0700 R [u 3BBFE944-6FF8-4AA6-AFF0-F0123581E1F6:m 1536BA8D-5E1E-4B27-82C0-10996F2EC8B1] [<private>(<private>)] plugin loaded and ready for host
default 07:08:29.789959-0700 distnoted register name: com.apple.inputmethodkit.abnormaldeath object: com.apple.PressAndHold token: f468c pid: 13961
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default 07:08:29.824385-0700 R RTextView: parserContextForPosition: 1067, line start: 1000
default 07:08:29.830034-0700 R RController.setStatusLine: "Loading R ..."
default 07:08:29.830233-0700 R - success: YES
default 07:08:29.830276-0700 R - set R options
default 07:08:29.830306-0700 R REngine.executeString:"options(help_type='html')"
default 07:08:29.830890-0700 R RController.setStatusLine: "executing: options(help_type='html')"
default 07:08:29.831614-0700 R RController.setStatusLine: "Loading R ..."
default 07:08:29.831980-0700 R - success: YES
default 07:08:29.832026-0700 R - set default CRAN mirror
default 07:08:29.832117-0700 R - loading secondary NIBs
default 07:08:29.826423-0700 distnoted register name: NSSnappingPrefsDidChangeNotificationNameGlobal object: kCFNotificationAnyObject token: f468e pid: 13961
default 07:08:29.846281-0700 R VignettesController.awakeFromNib
default 07:08:29.847253-0700 R main: finish launching
default 07:08:29.847795-0700 R Registering for test daemon availability notify post.
default 07:08:29.848057-0700 R notify_get_state check indicated test daemon not ready.
default 07:08:29.847712-0700 distnoted register name: com.apple.accessibility.api object: kCFNotificationAnyObject token: f46d5 pid: 13961
default 07:08:29.858115-0700 R RController:applicationDidFinishLaunching
default 07:08:29.858175-0700 R - clean up and flush console
default 07:08:29.858225-0700 R original: 0:0, insertion: 0, length: 738, prompt: 0, commit: 0, overwrite:0
default 07:08:29.858259-0700 R RController writeConsoleDirectly, beginEditing
default 07:08:29.858360-0700 R RController: textStorageDidProcessEditing <<RController: 0x7fc540632c70>> with mask 3
default 07:08:29.858527-0700 R RController: textViewDidChangeSelection
default 07:08:29.859563-0700 R RController writeConsoleDirectly, endEditing
default 07:08:29.859643-0700 R RController: textViewDidChangeSelection
default 07:08:29.859745-0700 R REngine.evaluateString:".Platform$pkgType"
default 07:08:29.860404-0700 R RController.setStatusLine: "executing: .Platform$pkgType"
default 07:08:29.860958-0700 R RController.setStatusLine: "Loading R ..."
default 07:08:29.861082-0700 R - result: RSEXP@41072bb0, string[1]
default 07:08:29.861134-0700 R - pkgType in this R: "mac.binary"
default 07:08:29.861166-0700 R - setup notification and timers
default 07:08:29.861598-0700 R RController.applicationDidFinishLaunching - load history file .Rapp.history
default 07:08:29.861917-0700 R RController.openDocumentsPending: process pending 'odoc' events
default 07:08:29.861953-0700 R - 1 documents to open
default 07:08:29.861989-0700 R - application:openFile:/Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/Data_PIpeline.R called
default 07:08:29.862102-0700 R - intial start, changing wd to pathname whic is /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/
default 07:08:29.862242-0700 R RController.doClearHistory
default 07:08:29.862521-0700 R RController.doLoadHistory
default 07:08:29.862734-0700 R - history file to load: .Rapp.history
default 07:08:29.862870-0700 R RController.doClearHistory
default 07:08:29.863260-0700 R - cleared history, reload with: .Rapp.history
default 07:08:29.979057-0700 R appLaunched = NO, openInEditor = YES
default 07:08:29.979156-0700 R - application:openFile path of URL: <file:///Users/brandonhurr/Dropbox%20(BioLumic%20Ltd)/Data%20standardisation/Data_PIpeline.R>
default 07:08:29.979197-0700 R RDocumentController.openDocumentWithContentsOfURL: /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/Data_PIpeline.R
default 07:08:29.979338-0700 R - call super -> openDocumentWithContentsOfURL: /Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/Data_PIpeline.R
default 07:08:29.980026-0700 distnoted register name: com.apple.quicklook.GlobalChange object: kCFNotificationAnyObject token: f46da pid: 13961
default 07:08:29.983819-0700 R - application:openFile:/Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/Data_PIpeline.R with wd: </Users/brandonhurr/Dropbox (BioLumic Ltd)/Data standardisation/> done
default 07:08:29.983884-0700 R REngine.executeString:"if (exists('.First') && is.function(.First) && !identical(.First, .__RGUI__..First)) .First()"
default 07:08:29.984575-0700 R RController.setStatusLine: "executing: if (exists('.First') && is.function(.First) && !identical(.First, .__RGUI__..First)) .First()"
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default 07:08:30.025700-0700 R RTextView: parserContextForPosition: 950, line start: 947
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default 07:08:30.032211-0700 R RController.setStatusLine: "Loading R ..."
default 07:08:30.032350-0700 R - success: YES
default 07:08:30.032393-0700 R - set Quartz preferences (if necessary)
default 07:08:30.032469-0700 R RController.setStatusLine: ""
default 07:08:30.032512-0700 R REngine.evaluateString:"Sys.getlocale()"
default 07:08:30.033262-0700 R RController.setStatusLine: "executing: Sys.getlocale()"
default 07:08:30.033837-0700 R RController.setStatusLine: ""
default 07:08:30.033916-0700 R - result: RSEXP@457b9320, string[1]
default 07:08:30.034926-0700 R WARNING: _autoreopenDocuments is not supported, cannot re-open autosaved documents
default 07:08:30.034996-0700 R - done, ready to go
default 07:08:30.035423-0700 R RController.applicationDidFinishLaunching - show main window
default 07:08:30.054554-0700 R main: entering REPL
default 07:08:30.054655-0700 R original: 738:0, insertion: 738, length: 58, prompt: 738, commit: 738, overwrite:0
default 07:08:30.054697-0700 R RController writeConsoleDirectly, beginEditing
default 07:08:30.054766-0700 R RController: textStorageDidProcessEditing <<RController: 0x7fc540632c70>> with mask 3
default 07:08:30.054929-0700 R RController: textViewDidChangeSelection
default 07:08:30.055321-0700 R RController writeConsoleDirectly, endEditing
default 07:08:30.055418-0700 R RController: textViewDidChangeSelection
default 07:08:30.055500-0700 R RController handleWritePrompt: '> ', beginEditing
default 07:08:30.055571-0700 R RController: textStorageDidProcessEditing <<RController: 0x7fc540632c70>> with mask 3
default 07:08:30.055687-0700 R RController: textViewDidChangeSelection
default 07:08:30.055860-0700 R RController handleWritePrompt: '> ', endEditing
default 07:08:30.055939-0700 R RController: textViewDidChangeSelection
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default 07:08:30.144496-0700 R RTextView: parserContextForPosition: 967, line start: 947
default 07:08:30.144552-0700 R RTextView: parserContextForPosition: 965, line start: 947
default 07:08:30.144579-0700 R RTextView: parserContextForPosition: 964, line start: 947
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default 07:08:30.144706-0700 R RTextView: parserContextForPosition: 960, line start: 947
default 07:08:30.144758-0700 R RTextView: parserContextForPosition: 959, line start: 947
default 07:08:30.144795-0700 R RTextView: parserContextForPosition: 958, line start: 947
default 07:08:30.144850-0700 R RTextView: parserContextForPosition: 957, line start: 947
default 07:08:30.144886-0700 R RTextView: parserContextForPosition: 956, line start: 947
default 07:08:30.144941-0700 R RTextView: parserContextForPosition: 955, line start: 947
default 07:08:30.144979-0700 R RTextView: parserContextForPosition: 953, line start: 947
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default 07:08:30.145061-0700 R RTextView: parserContextForPosition: 951, line start: 947
default 07:08:30.145113-0700 R RTextView: parserContextForPosition: 950, line start: 947
default 07:08:30.145154-0700 R RTextView: parserContextForPosition: 949, line start: 947
default 07:08:30.145379-0700 R RTextView: parserContextForPosition: 1067, line start: 1000
default 07:08:30.147886-0700 R RTextView: functionNameForCurrentScope
default 07:08:30.147970-0700 R RTextView: returned range for current word: {0, 7}
default 07:08:30.148015-0700 R - current word “library”
default 07:08:30.148063-0700 R - invalid current word -> start parsing for current function scope
default 07:08:30.148096-0700 R - parse range invalid - bail
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default