biovisualize/index.html

## index.html
<!DOCTYPE html>
<html>
<head>
    <meta charset="utf-8">
    <title></title>
    <script type="text/javascript" src="http://d3js.org/d3.v3.min.js"></script>
    <style type="text/css">

    </style>
</head>
<body>
<script type="text/javascript">

    // Following this idea: https://hacks.mozilla.org/2011/12/faster-canvas-pixel-manipulation-with-typed-arrays/
    var chartSize = 1000;
    var dataSize = 1000;

    var dataset = d3.range(dataSize).map(function(d, i){return d3.range(dataSize).map(function(d, i){return ~~(Math.random()*255);});});

    var canvas = d3.select('body')
        .append('canvas')
        .style({position: 'absolute', width: chartSize + 'px', height: chartSize + 'px'})
        .attr({width: dataSize, height: dataSize})
        .node();

    var canvasWidth  = canvas.width;
    var canvasHeight = canvas.height;
    var ctx = canvas.getContext('2d');
    var imageData = ctx.getImageData(0, 0, canvasWidth, canvasHeight);

    var buf = new ArrayBuffer(imageData.data.length);
    var buf8 = new Uint8ClampedArray(buf);
    var data = new Uint32Array(buf);

    for (var y = 0; y < canvasHeight; ++y) {
        for (var x = 0; x < canvasWidth; ++x) {
            var value = dataset[y][x];
            data[y * canvasWidth + x] =
                (255   << 24) |    // alpha
                (value/2 << 16) |    // blue
                (value <<  8) |    // green
                255;            // red
        }
    }

    imageData.data.set(buf8);

    ctx.putImageData(imageData, 0, 0);

</script>
</body>
</html>
	<!DOCTYPE html>
	<html>
	<head>
	<meta charset="utf-8">
	<title></title>
	<script type="text/javascript" src="http://d3js.org/d3.v3.min.js"></script>
	<style type="text/css">

	</style>
	</head>
	<body>
	<script type="text/javascript">

	// Following this idea: https://hacks.mozilla.org/2011/12/faster-canvas-pixel-manipulation-with-typed-arrays/
	var chartSize = 1000;
	var dataSize = 1000;

	var dataset = d3.range(dataSize).map(function(d, i){return d3.range(dataSize).map(function(d, i){return ~~(Math.random()*255);});});

	var canvas = d3.select('body')
	.append('canvas')
	.style({position: 'absolute', width: chartSize + 'px', height: chartSize + 'px'})
	.attr({width: dataSize, height: dataSize})
	.node();

	var canvasWidth = canvas.width;
	var canvasHeight = canvas.height;
	var ctx = canvas.getContext('2d');
	var imageData = ctx.getImageData(0, 0, canvasWidth, canvasHeight);

	var buf = new ArrayBuffer(imageData.data.length);
	var buf8 = new Uint8ClampedArray(buf);
	var data = new Uint32Array(buf);

	for (var y = 0; y < canvasHeight; ++y) {
	for (var x = 0; x < canvasWidth; ++x) {
	var value = dataset[y][x];
	data[y * canvasWidth + x] =
	(255 << 24) \| // alpha
	(value/2 << 16) \| // blue
	(value << 8) \| // green
	255; // red
	}
	}

	imageData.data.set(buf8);

	ctx.putImageData(imageData, 0, 0);

	</script>
	</body>
	</html>