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'''Problems with file descriptors remaining open when making a LOT of 
subprocess calls can occasionally be solved by calling os.close() on
the file descriptor (returned by os.open() or pipe).'''


stdout, self.stderr = subprocess.Popen('primer3_core %s' % self.tf[1],\
shell=True, stdout=subprocess.PIPE, stdin=None, \
stderr=subprocess.PIPE, universal_newlines=True).communicate()

# make sure that we close the stupid ass input file or we're going

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q = qplot(chr_only$target_chromo, chr_only$count, geom="bar")
q + opts(axis.text.x=theme_text(angle=-45, hjust=0))

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From Rick James @ http://dev.mysql.com/doc/refman/5.0/en/group-by-functions.html

• Mode

    SELECT trimmed_len, COUNT(trimmed_len) AS mode FROM sequence GROUP BY trimmed_len ORDER BY mode DESC LIMIT 1;
  

From Michael Stassen @ http://lists.mysql.com/mysql/155540

• Median

CREATE TEMPORARY TABLE tmp (n INT UNSIGNED AUTO_INCREMENT NOT NULL PRIMARY KEY, value VARCHAR(99) NOT NULL );

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on handle_string(s)
	set cmd to "~/Bin/gcalcli quick " & quoted form of s
	doTerminal(cmd)
end handle_string


on doTerminal(cmd)
	do shell script cmd
end doTerminal

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import os 
import subprocess
import multiprocessing

def q_runner(n_procs, list_item, function, *args):
    '''generic function used to start worker processes'''
    task_queue      = multiprocessing.Queue()
    results_queue   = multiprocessing.JoinableQueue()
    if args:
        arguments = (task_queue, results_queue,) + args

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export VERSIONER_PYTHON_PREFER_32_BIT=yes

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# Create a new repo at github called `test`
# On your local machine:
$ cd test
$ git init
Initialized empty Git repository in /Users/bcf/Git/me/test/.git/ 
$ touch README
$ git add .
$ git commit -m 'first commit'

# wire everything up to the remote at github (replace yourName)

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Index: py2app/build_app.py
===================================================================
--- py2app/build_app.py	(revision 89)
+++ py2app/build_app.py	(working copy)
@@ -40,7 +40,7 @@
 from py2app import recipes
 
 from distutils.sysconfig import get_config_var
-PYTHONRAMEWORK=get_config_var('PYTHONFRAMEWORK')
+PYTHONFRAMEWORK=get_config_var('PYTHONFRAMEWORK')

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python configure.py CFLAGS+='-arch x86_64 -arch i386 -isysroot /Developer/SDKs/MacOSX10.6.sdk' CXXFLAGS+='-arch x86_64 -arch i386 -isysroot /Developer/SDKs/MacOSX10.6.sdk' LFLAGS+='-arch x86_64 -arch i386 -Wl,-syslibroot,/Developer/SDKs/MacOSX10.6.sdk'

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#!/usr/local/bin
"""
setup.py - script for building MyApplication
                          
Usage:
    % python setup.py py2app
"""
from setuptools import setup
import os, sys, shutil