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Created January 18, 2020 10:50
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EasyBuild test report for easyconfigs PR #9670
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easybuild_test_report_easyconfigs_pr9670_20205018-UTC-10-50-39.md

Test report for easybuilders/easybuild-easyconfigs#9670

Test result

Build succeeded for 1 out of 1 (1 easyconfigs in this PR)

Overview of tested easyconfigs (in order)

  • SUCCESS GROMACS-2020-foss-2019b.eb

Time info

  • start: Sat, 18 Jan 2020 10:39:29 +0000 (UTC)
  • end: Sat, 18 Jan 2020 10:50:39 +0000 (UTC)

EasyBuild info

  • easybuild-framework version: 4.1.1.dev0-r2397e60e0f99f0f3c0ab6d2b3e328aec57a3f58f
  • easybuild-easyblocks version: 4.1.1.dev0-r126c726f351a6ef922b87f946c9e1d22dc6bbef7
  • command line:
eb -dfr -u --from-pr 9670
  • full configuration (includes defaults):
--allow-loaded-modules='EasyBuild'
--buildpath='/tmp/kehoste/easybuild/build'
--check-ebroot-env-vars='warn'
--cleanup-builddir
--cleanup-easyconfigs
--cleanup-tmpdir
--color='auto'
--container-type='singularity'
--containerpath='/work/maintainers/CO7/broadwell/containers'
--debug
--default-opt-level='defaultopt'
--detect-loaded-modules='warn'
--disable-add-dummy-to-minimal-toolchains
--disable-add-system-to-minimal-toolchains
--disable-allow-modules-tool-mismatch
--disable-allow-use-as-root-and-accept-consequences
--disable-avail-cfgfile-constants
--disable-avail-easyconfig-constants
--disable-avail-easyconfig-licenses
--disable-avail-easyconfig-params
--disable-avail-easyconfig-templates
--disable-avail-hooks
--disable-avail-module-naming-schemes
--disable-avail-modules-tools
--disable-avail-repositories
--disable-check-conflicts
--disable-check-contrib
--disable-check-github
--disable-check-style
--disable-consider-archived-easyconfigs
--disable-container-build-image
--disable-containerize
--disable-copy-ec
--disable-debug-lmod
--disable-devel
--disable-dry-run
--disable-dry-run-short
--disable-dump-autopep8
--disable-dump-env-script
--disable-enforce-checksums
--disable-experimental
--disable-extended-dry-run
--disable-fetch
--disable-fix-deprecated-easyconfigs
--disable-hidden
--disable-ignore-checksums
--disable-ignore-osdeps
--disable-info
--disable-install-github-token
--disable-install-latest-eb-release
--disable-job
--disable-last-log
--disable-list-toolchains
--disable-logtostdout
--disable-minimal-toolchains
--disable-missing-modules
--disable-module-depends-on
--disable-module-extensions
--disable-module-only
--disable-new-branch-github
--disable-new-pr
--disable-package
--disable-pretend
--disable-preview-pr
--disable-quiet
--disable-read-only-installdir
--disable-rebuild
--disable-recursive-module-unload
--disable-regtest
--disable-remove-ghost-install-dirs
--disable-rpath
--disable-sequential
--disable-set-default-module
--disable-set-gid-bit
--disable-show-config
--disable-show-default-configfiles
--disable-show-default-moduleclasses
--disable-show-ec
--disable-show-full-config
--disable-show-system-info
--disable-skip
--disable-skip-test-cases
--disable-sticky-bit
--disable-terse
--disable-update-modules-tool-cache
--disable-use-existing-modules
--disable-verify-easyconfig-filenames
--download-timeout='300.0'
--extended-dry-run-ignore-errors
--fixed-installdir-naming-scheme
--force
--from-pr='9670'
--git-working-dirs-path='/work/maintainers/easybuild-easyconfigs'
--github-user='boegel'
--group-writable-installdir
--ignore-dirs='.git,.svn'
--include-easyblocks=''
--include-module-naming-schemes=''
--include-toolchains=''
--installpath='/work/maintainers/CO7/broadwell'
--job-backend='Slurm'
--job-max-jobs='0'
--job-max-walltime='24'
--job-output-dir='/home/kehoste'
--job-polling-interval='30.0'
--lib64-fallback-sanity-check
--local-var-naming-check='warn'
--logfile-format='easybuild,easybuild-%(name)s-%(version)s-%(date)s.%(time)s.log'
--map-toolchains
--max-fail-ratio-adjust-permissions='0.5'
--module-naming-scheme='EasyBuildMNS'
--module-syntax='Lua'
--moduleclasses='base,astro,bio,cae,chem,compiler,data,debugger,devel,geo,ide,lang,lib,math,mpi,numlib,perf,quantum,phys,system,toolchain,tools,vis'
--modules-tool-version-check
--modules-tool='Lmod'
--mpi-tests
--output-format='txt'
--package-naming-scheme='EasyBuildPNS'
--package-release='1'
--package-tool-options=''
--package-tool='fpm'
--package-type='rpm'
--packagepath='/work/maintainers/CO7/broadwell/packages'
--pr-target-account='easybuilders'
--pr-target-branch='develop'
--pr-target-repo='easybuild-easyconfigs'
--pre-create-installdir
--prefix='/work/maintainers/CO7/broadwell'
--repository='FileRepository'
--repositorypath='/work/maintainers/CO7/broadwell/ebfiles_repo'
--robot-paths=''
--robot='/work/maintainers/easybuild-easyconfigs/easybuild/easyconfigs'
--sourcepath='/work/maintainers/sources'
--strict='warn'
--subdir-modules='modules'
--subdir-software='software'
--suffix-modules-path='all'
--trace
--umask='002'
--upload-test-report
--use-ccache='False'
--use-f90cache='False'
--zip-logs='bzip2'

System info

  • core count: 16
  • cpu model: Intel(R) Xeon(R) CPU E5-2660 v4 @ 2.00GHz
  • cpu speed: 1999.998
  • cpu vendor: Intel
  • gcc version: Using built-in specs.; COLLECT_GCC=gcc; COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/4.8.5/lto-wrapper; Target: x86_64-redhat-linux; Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-linker-hash-style=gnu --enable-languages=c,c++,objc,obj-c++,java,fortran,ada,go,lto --enable-plugin --enable-initfini-array --disable-libgcj --with-isl=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/isl-install --with-cloog=/builddir/build/BUILD/gcc-4.8.5-20150702/obj-x86_64-redhat-linux/cloog-install --enable-gnu-indirect-function --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux; Thread model: posix; gcc version 4.8.5 20150623 (Red Hat 4.8.5-36) (GCC) ;
  • glibc version: 2.17
  • hostname: generoso
  • os name: centos linux
  • os type: Linux
  • os version: 7.6.1810
  • platform name: x86_64-unknown-linux
  • python version: 3.6.8 (default, Apr 25 2019, 21:02:35) ; [GCC 4.8.5 20150623 (Red Hat 4.8.5-36)]
  • system gcc path: /usr/bin/gcc
  • system python path: /usr/bin/python
  • total memory: 64264

List of loaded modules

  • (none)

Environment

BASH_ENV = /opt/modules/lmod/lmod/init/bash
BASH_FUNC_ml() = () {  eval $($LMOD_DIR/ml_cmd "$@")
}
BASH_FUNC_module() = () {  eval $($LMOD_CMD bash "$@") && eval $(${LMOD_SETTARG_CMD:-:} -s sh)
}
CPATH = /opt/slurm/default/include:/opt/slurm/default/include
EASYBUILD_BUILDPATH = /tmp/kehoste/easybuild/build
EASYBUILD_DEBUG = 1
EASYBUILD_DOWNLOAD_TIMEOUT = 300
EASYBUILD_GITHUB_USER = boegel
EASYBUILD_GIT_WORKING_DIRS_PATH = /work/maintainers/easybuild-easyconfigs
EASYBUILD_GROUP_WRITABLE_INSTALLDIR = 1
EASYBUILD_JOB_BACKEND = Slurm
EASYBUILD_PREFIX = /work/maintainers/CO7/broadwell
EASYBUILD_SOURCEPATH = /work/maintainers/sources
EASYBUILD_TRACE = 1
EASYBUILD_UMASK = 002
EASYBUILD_ZIP_LOGS = bzip2
EB_PYTHON = python36
EB_SCRIPT_PATH = /work/maintainers/easybuild-framework/eb
EB_VERBOSE = 1
FANCYLOGGER_IGNORE_MPI4PY = 1
HISTCONTROL = ignoredups
HISTFILESIZE = 100000000
HISTSIZE = 1000000
HISTTIMEFORMAT = %F %T 
HOME = /home/kehoste
HOSTNAME = generoso
INTEL_LICENSE_FILE = /work/maintainers/licenses/intel.lic
LANG = en_US.UTF-8
LC_ALL = en_US.UTF-8
LC_CTYPE = UTF-8
LD_LIBRARY_PATH = /opt/slurm/default/lib
LESSOPEN = ||/usr/bin/lesspipe.sh %s
LIBRARY_PATH = /opt/slurm/default/lib:/opt/slurm/default/lib
LMOD_CMD = /opt/modules/lmod/lmod/libexec/lmod
LMOD_DIR = /opt/modules/lmod/lmod/libexec
LMOD_PKG = /opt/modules/lmod/lmod
LMOD_SETTARG_FULL_SUPPORT = no
LMOD_SHORT_TIME = 86400
LMOD_VERSION = 7.8.21
LMOD_sys = Linux
LOGNAME = kehoste
LS_COLORS = rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=01;05;37;41:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:*.tar=01;31:*.tgz=01;31:*.arc=01;31:*.arj=01;31:*.taz=01;31:*.lha=01;31:*.lz4=01;31:*.lzh=01;31:*.lzma=01;31:*.tlz=01;31:*.txz=01;31:*.tzo=01;31:*.t7z=01;31:*.zip=01;31:*.z=01;31:*.Z=01;31:*.dz=01;31:*.gz=01;31:*.lrz=01;31:*.lz=01;31:*.lzo=01;31:*.xz=01;31:*.bz2=01;31:*.bz=01;31:*.tbz=01;31:*.tbz2=01;31:*.tz=01;31:*.deb=01;31:*.rpm=01;31:*.jar=01;31:*.war=01;31:*.ear=01;31:*.sar=01;31:*.rar=01;31:*.alz=01;31:*.ace=01;31:*.zoo=01;31:*.cpio=01;31:*.7z=01;31:*.rz=01;31:*.cab=01;31:*.jpg=01;35:*.jpeg=01;35:*.gif=01;35:*.bmp=01;35:*.pbm=01;35:*.pgm=01;35:*.ppm=01;35:*.tga=01;35:*.xbm=01;35:*.xpm=01;35:*.tif=01;35:*.tiff=01;35:*.png=01;35:*.svg=01;35:*.svgz=01;35:*.mng=01;35:*.pcx=01;35:*.mov=01;35:*.mpg=01;35:*.mpeg=01;35:*.m2v=01;35:*.mkv=01;35:*.webm=01;35:*.ogm=01;35:*.mp4=01;35:*.m4v=01;35:*.mp4v=01;35:*.vob=01;35:*.qt=01;35:*.nuv=01;35:*.wmv=01;35:*.asf=01;35:*.rm=01;35:*.rmvb=01;35:*.flc=01;35:*.avi=01;35:*.fli=01;35:*.flv=01;35:*.gl=01;35:*.dl=01;35:*.xcf=01;35:*.xwd=01;35:*.yuv=01;35:*.cgm=01;35:*.emf=01;35:*.axv=01;35:*.anx=01;35:*.ogv=01;35:*.ogx=01;35:*.aac=01;36:*.au=01;36:*.flac=01;36:*.mid=01;36:*.midi=01;36:*.mka=01;36:*.mp3=01;36:*.mpc=01;36:*.ogg=01;36:*.ra=01;36:*.wav=01;36:*.axa=01;36:*.oga=01;36:*.spx=01;36:*.xspf=01;36:
LUAROCKS_PREFIX = /opt/modules/lua/luarocks/2.4.3
LUA_CPATH = /opt/modules/lua/5.3.4/lib/lua/5.3/?.so;/opt/modules/lua/luarocks/2.4.3/lib/lua/5.3/?.so;;
LUA_PATH = /opt/modules/lua/5.3.4/share/lua/5.3/?.lua;/opt/modules/lua/5.3.4/share/lua/5.3/?/init.lua;/opt/modules/lua/luarocks/2.4.3/share/lua/5.3/?.lua;/opt/modules/lua/luarocks/2.4.3/share/lua/5.3/?/init.lua;;
MAIL = /var/spool/mail/kehoste
MANPATH = /opt/slurm/default/share/man:/opt/slurm/default/share/man:/opt/modules/lmod/lmod/share/man:
MODULEPATH = /work/maintainers/CO7/broadwell/modules/all:/opt/modules/modulefiles/Linux:/opt/modules/modulefiles/Core:/opt/modules/lmod/lmod/modulefiles/Core
MODULEPATH_ROOT = /opt/modules/modulefiles
MODULESHOME = /opt/modules/lmod/lmod
PATH = /work/maintainers/easybuild-framework:/opt/slurm/default/bin:/opt/modules/lua/luarocks/2.4.3/bin:/opt/modules/lua/5.3.4/bin:/work/maintainers/easybuild-framework:/opt/slurm/default/bin:/usr/lib64/qt-3.3/bin:/opt/modules/lua/luarocks/2.4.3/bin:/opt/modules/lua/5.3.4/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home/kehoste/.local/bin:/home/kehoste/bin
PROMPT_COMMAND = printf "\033]0;%s@%s:%s\007" "${USER}" "${HOSTNAME%%.*}" "${PWD/#$HOME/~}"
history -a; history -c; history -r
history -a; history -c; history -r
PWD = /home/kehoste
PYTHONOPTIMIZE = 1
PYTHONPATH = /work/maintainers/easybuild-framework:/work/maintainers/easybuild-easyblocks:/work/maintainers/easybuild-easyconfigs:/work/maintainers/easybuild-framework:/work/maintainers/easybuild-easyblocks:/work/maintainers/easybuild-easyconfigs::/work/maintainers/py3pkgs/lib/python3.6/site-packages:/work/maintainers/py3pkgs/lib/python3.6/site-packages
QTDIR = /usr/lib64/qt-3.3
QTINC = /usr/lib64/qt-3.3/include
QTLIB = /usr/lib64/qt-3.3/lib
QT_GRAPHICSSYSTEM = native
QT_GRAPHICSSYSTEM_CHECKED = 1
SELINUX_LEVEL_REQUESTED = 
SELINUX_ROLE_REQUESTED = 
SELINUX_USE_CURRENT_RANGE = 
SHELL = /bin/bash
SHLVL = 3
SSH_AUTH_SOCK = /tmp/ssh-useAIiqkGQ/agent.26297
SSH_CLIENT = 91.179.14.180 52617 22
SSH_CONNECTION = 91.179.14.180 52617 10.1.0.10 22
SSH_TTY = /dev/pts/4
STY = 26713.pts-4.generoso
TERM = screen
TERMCAP = SC|screen|VT 100/ANSI X3.64 virtual terminal:\
	:DO=\E[%dB:LE=\E[%dD:RI=\E[%dC:UP=\E[%dA:bs:bt=\E[Z:\
	:cd=\E[J:ce=\E[K:cl=\E[H\E[J:cm=\E[%i%d;%dH:ct=\E[3g:\
	:do=^J:nd=\E[C:pt:rc=\E8:rs=\Ec:sc=\E7:st=\EH:up=\EM:\
	:le=^H:bl=^G:cr=^M:it#8:ho=\E[H:nw=\EE:ta=^I:is=\E)0:\
	:li#48:co#204:am:xn:xv:LP:sr=\EM:al=\E[L:AL=\E[%dL:\
	:cs=\E[%i%d;%dr:dl=\E[M:DL=\E[%dM:dc=\E[P:DC=\E[%dP:\
	:im=\E[4h:ei=\E[4l:mi:IC=\E[%d@:ks=\E[?1h\E=:\
	:ke=\E[?1l\E>:vi=\E[?25l:ve=\E[34h\E[?25h:vs=\E[34l:\
	:ti=\E[?1049h:te=\E[?1049l:us=\E[4m:ue=\E[24m:so=\E[3m:\
	:se=\E[23m:mb=\E[5m:md=\E[1m:mr=\E[7m:me=\E[m:ms:\
	:Co#8:pa#64:AF=\E[3%dm:AB=\E[4%dm:op=\E[39;49m:AX:\
	:vb=\Eg:G0:as=\E(0:ae=\E(B:\
	:ac=\140\140aaffggjjkkllmmnnooppqqrrssttuuvvwwxxyyzz{{||}}~~..--++,,hhII00:\
	:po=\E[5i:pf=\E[4i:Km=\E[M:k0=\E[10~:k1=\EOP:k2=\EOQ:\
	:k3=\EOR:k4=\EOS:k5=\E[15~:k6=\E[17~:k7=\E[18~:\
	:k8=\E[19~:k9=\E[20~:k;=\E[21~:F1=\E[23~:F2=\E[24~:\
	:F3=\E[1;2P:F4=\E[1;2Q:F5=\E[1;2R:F6=\E[1;2S:\
	:F7=\E[15;2~:F8=\E[17;2~:F9=\E[18;2~:FA=\E[19;2~:kb=�:\
	:K2=\EOE:kB=\E[Z:kF=\E[1;2B:kR=\E[1;2A:*4=\E[3;2~:\
	:*7=\E[1;2F:#2=\E[1;2H:#3=\E[2;2~:#4=\E[1;2D:%c=\E[6;2~:\
	:%e=\E[5;2~:%i=\E[1;2C:kh=\E[1~:@1=\E[1~:kH=\E[4~:\
	:@7=\E[4~:kN=\E[6~:kP=\E[5~:kI=\E[2~:kD=\E[3~:ku=\EOA:\
	:kd=\EOB:kr=\EOC:kl=\EOD:km:
USER = kehoste
WINDOW = 0
XDG_RUNTIME_DIR = /run/user/5000
XDG_SESSION_ID = 2380
_ = /usr/bin/python36
_ModuleTable001_ = 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
_ModuleTable002_ = ZHVsZWZpbGVzL0NvcmUiLH0=
_ModuleTable_Sz_ = 2
__LMOD_REF_COUNT_MODULEPATH = /work/maintainers/CO7/broadwell/modules/all:2;/opt/modules/modulefiles/Linux:1;/opt/modules/modulefiles/Core:1;/opt/modules/lmod/lmod/modulefiles/Core:1
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