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@denniskigen
Created November 7, 2019 10:09
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Column name to concept type mappings
cur_visit_type answer concept mapping
1 1911 New
2 1246 Scheduled visit
cancer_type answer concept mapping
1 6485 Sarcoma
2 6514 Genitourinary cancer
3 6520 Gastrointenstinal cancer
4 6528 Head and neck cancer
5 6536 Gynecologic cancer
6 6551 Lymphoma cancer
7 6540 Skin cancer
8 6544 Breast cancer
9 216 Leukemia
10 5622 Other non-coded
11 10129 Non-small cell lung cancer
12 10130 Small-cell lung cancer
type_of_sarcoma answer concept mapping
1 507 Kaposi's sarcoma
2 6486 Soft tissue sarcoma
3 6487 Osteogenic sarcoma
4 6488 Ewing's sarcoma
5 6489 Rhabdomyosarcoma
6 6490 Other sarcoma
type_of_GU_cancer answer concept mapping
1 6515 Bladder cancer
2 6516 Renal cell cancer
3 6517 Wilm's tumor
4 6518 Prostate cancer
5 6519 Testes cancer
6 5622 Other non-coded
type_of_GI_cancer answer concept mapping
1 6521 Esophageal cancer
2 6522 Gastric cancer
3 6523 Pancreatic cancer
4 6524 Cholangiocarcinoma
5 6525 Colon cancer
6 6526 Rectal cancer
7 6527 Anal cancer
8 6568 Hepatocellular cancer
9 5622 Other non-coded
head_and_neck_cancer answer concept mapping
1 6529 Thyroid cancer
2 6530 Nasopharyngeal cancer
3 6531 Oropharyngeal cancer
4 6532 Hypopharyngeal cancer
5 6533 Laryngeal squamous cell cancer
6 6534 Head and neck squamous cell cancer, site not specified
7 5622 Other non-coded
gynecologic_cancer answer concept mapping
1 6537 Cervical cancer
2 6538 Uterine cancer
3 6539 Ovarian cancer
4 5622 Other non-coded
lymphoma_cancer answer concept mapping
1 6553 Non-Hodgkin's lymphoma
2 6552 Hodgkin's lymphoma
3 8423 Other non-coded
4 5622 Burkitt's lymphoma
skin_cancer answer concept mapping
1 6541 Skin squamous cell cancer
2 6542 Basal cell cancer
3 8423 Melanoma
4 5622 Other non-coded
breast_cancer answer concept mapping
1 6545 Inflammatory breast cancer
2 9842 Ductal cell carcinoma
3 5622 Other non-coded
type_of_leukemia answer concept mapping
1 6547 Chronic myelogenous leukemia
2 6548 Chronic lymphocytic leukemia
3 6549 Acute myelogenous leukemia
4 6550 Acute lymphocytic leukemia
5 5622 Other non-coded
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