dpwrussell

from json import JSONEncoder
class JSONSetEncoder(JSONEncoder):
    def default(self, obj):
        if isinstance(obj, set):
            return list(obj)
        return JSONEncoder.default(self, obj)
        
json.dumps(thing_to_encode, cls=JSONSetEncoder)

dpwrussell

#!/bin/bash
set -e

if grep -qs '/media/btrfs-root' /proc/mounts; then
    echo "It's mounted"
else
    mount /media/btrfs-root
fi

cd /media/btrfs-root

dpwrussell

# Copyright 2014 Douglas Russell
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.

# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

dpwrussell

              <script type="text/javascript">
                $(document).ready(function() 
                {
                  $('#webadmin_main_tabs a[href*="' + location.pathname.split("/")[2] + '"]').addClass('selected_admin_tab');
                });
              </script>

dpwrussell

#wmoore@jabber.lifesci.dundee.ac.uk
#What I do...
brew install hub
git submodule foreach hub remote add snoopycrimecop
git submodule foreach git fetch snoopycrimecop
Then each time I want to build….
git fetch snoopycrimecop
git checkout develop-latest
git reset --hard snoopycrimecop/merge/develop/latest
git submodule foreach hub remote update snoopycrimecop

dpwrussell

#!/bin/bash

# Courtesy of http://hints.macworld.com/dlfiles/preexec.bash.txt

# preexec.bash -- Bash support for ZSH-like 'preexec' and 'precmd' functions.

# The 'preexec' function is executed before each interactive command is
# executed, with the interactive command as its argument.  The 'precmd'
# function is executed before each prompt is displayed.

dpwrussell

def getAllObjects(conn, project_ids, dataset_ids, image_ids, screen_ids,
                  plate_ids):
    """
    Given a list of containers and images, calculate all the descendants
    and necessary siblings (for any filesets)
    """
    #TODO Handle None inputs, maybe add defaults
    params = omero.sys.ParametersI()
    # params.addId(experimenter_id)
    qs = conn.getQueryService()

dpwrussell

from omero.gateway import BlitzGateway
from omero.sys import Parameters, ParametersI
from omero.model import *
from omero.rtypes import *
from omero import ValidationException
import ConfigParser

from omero.model import ExperimenterI, ProjectI, DatasetI, ImageI, \
                        ScreenI, PlateI, \
                        ProjectDatasetLinkI, DatasetImageLinkI, \

dpwrussell

@pytest.fixture(scope='function')
def project_broken_multi(conn, request, itest, update_service):

    # Create a project and dataset and link them
    project1 = ProjectI()
    project1.name = rstring(itest.uuid())
    dataset1 = DatasetI()
    dataset1.name = rstring(itest.uuid())
    project1.linkDataset(dataset1)

dpwrussell

#!/usr/bin/env python
# -*- coding: utf-8 -*-

# Copyright (C) 2014 Glencoe Software, Inc.
# All rights reserved.
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Affero General Public License as
# published by the Free Software Foundation, either version 3 of the
# License, or (at your option) any later version.