drpowell

This allows you to use simple blast search from your chrome location bar.  eg.  type "bn AGGTTGTATAGTTTGGGGCTCT"

Right-click in the chrome location bar, select "Edit Search Engines"
Scroll to the bottom
  - Enter a name, say "blastn"
  - Enter a keyword, say "bn"
  - Cut-and-paste the snippit below into the URL


https://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=%s&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&JOB_TITLE=&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=megaBlast&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=28&HSP_RANGE_MAX=0&MATRIX_NAME=PAM30&MATCH_SCORES=1,-2&GAPCOSTS=0 0&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=5755&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&DI_THRESH=&PSI_PSEUDOCOUNT=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=true&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&A

drpowell

module FmtLogHandler
    (fmtLogHandler
    ,logFormatter
    ) where

import System.Log.Logger

import System.Log
import System.Log.Handler
import System.IO

drpowell

module Library
  def self.leaf_paths_of(paths)
    normalized = paths.map {|s| x=s.squeeze('/'); x+='/'}
    leafs = normalized.reject { |x| normalized.any? { |a| x != a && a.start_with?(x) } }
    leafs.map {|x| x.chomp('/') }.uniq
  end
end

drpowell

main()
{
  float t=1;
  while(t!=0) {
    t+=2;
  }
}

drpowell