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May 7, 2025 19:29
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Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin dhcp-10-29-153-190.dyn.MIT.EDU 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
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[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
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[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
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[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking whether stripping libraries is possible... yes | |
[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
[spkg-install] checking whether to build static libraries... no | |
[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... yes | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for float.h... yes | |
[spkg-install] checking for limits.h... yes | |
[spkg-install] checking for stddef.h... yes | |
[spkg-install] checking for stdlib.h... (cached) yes | |
[spkg-install] checking for string.h... (cached) yes | |
[spkg-install] checking for sys/time.h... yes | |
[spkg-install] checking for stdint.h... (cached) yes | |
[spkg-install] checking for pthread.h... yes | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for a sed that does not truncate output... (cached) /opt/homebrew/bin/gsed | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
[spkg-install] checking whether g++ -std=gnu++11 supports C++11 features by default... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether to enable debugging options in the library... no | |
[spkg-install] checking whether to enable profiling everything in the library... no | |
[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking size of char... 1 | |
[spkg-install] checking size of short... 2 | |
[spkg-install] checking size of int... 4 | |
[spkg-install] checking size of long... 8 | |
[spkg-install] checking size of long long... 8 | |
[spkg-install] checking size of __int64_t... 8 | |
[spkg-install] checking for __int128_t... yes | |
[spkg-install] checking whether byte ordering is bigendian... no | |
[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
[spkg-install] checking whether to compile the drivers... no | |
[spkg-install] checking for pkg-config... /opt/homebrew/bin/pkg-config | |
[spkg-install] checking pkg-config is at least version 0.9.0... yes | |
[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for LAPACK in fflas-ffpack... no | |
[spkg-install] checking for NTL >= 5.0... not found | |
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[spkg-install] checking for FPLLL >= 4.0.1... checking for IML... found | |
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[spkg-install] --------------------------------------- | |
[spkg-install] checking whether gnuplot works... yes | |
[spkg-install] checking whether ps2pdf works... yes | |
[spkg-install] checking if tinyxml2 is available... no | |
[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
[spkg-install] checking whether to build documentation... no | |
[spkg-install] checking whether dot works... yes | |
[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
[spkg-install] sed: 1: "doc/DoxyfileDev": extra characters at the end of d command | |
[spkg-install] --------------------------------------- | |
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[spkg-install] --------------------------------------- | |
[spkg-install] --------------------------------------- | |
[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
[spkg-install] config.status: creating linbox-config | |
[spkg-install] config.status: creating examples/Makefile | |
[spkg-install] config.status: creating examples/data/Makefile | |
[spkg-install] config.status: creating doc/Makefile | |
[spkg-install] config.status: creating linbox/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/dixon-solver/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/gauss/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/matrix-blas3/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/opencl-kernels/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/polynomial-matrix/Makefile | |
[spkg-install] config.status: creating linbox/blackbox/Makefile | |
[spkg-install] config.status: creating linbox/element/Makefile | |
[spkg-install] config.status: creating linbox/field/Makefile | |
[spkg-install] config.status: creating linbox/matrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sparsematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/densematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/matrixdomain/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sliced3/Makefile | |
[spkg-install] config.status: creating linbox/randiter/Makefile | |
[spkg-install] config.status: creating linbox/ring/Makefile | |
[spkg-install] config.status: creating linbox/ring/ntl/Makefile | |
[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
[spkg-install] config.status: creating linbox/solutions/Makefile | |
[spkg-install] config.status: creating linbox/solutions/solve/Makefile | |
[spkg-install] config.status: creating linbox/solutions/echelon/Makefile | |
[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
[spkg-install] config.status: creating linbox/polynomial/Makefile | |
[spkg-install] config.status: creating tests/Makefile | |
[spkg-install] config.status: creating tests/data/Makefile | |
[spkg-install] config.status: creating tests/matrix/Makefile | |
[spkg-install] config.status: creating interfaces/Makefile | |
[spkg-install] config.status: creating interfaces/driver/Makefile | |
[spkg-install] config.status: creating interfaces/maple/Makefile | |
[spkg-install] config.status: creating interfaces/kaapi/Makefile | |
[spkg-install] config.status: creating benchmarks/Makefile | |
[spkg-install] config.status: creating benchmarks/data/Makefile | |
[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m16.819s user 0m5.141s sys 0m4.648s | |
Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin dhcp-10-29-153-190.dyn.MIT.EDU 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
[spkg-install] checking for file... file | |
[spkg-install] checking for objdump... objdump | |
[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
[spkg-install] checking for mt... no | |
[spkg-install] checking if : is a manifest tool... no | |
[spkg-install] checking for dsymutil... dsymutil | |
[spkg-install] checking for nmedit... nmedit | |
[spkg-install] checking for lipo... lipo | |
[spkg-install] checking for otool... otool | |
[spkg-install] checking for otool64... no | |
[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
[spkg-install] checking for stdlib.h... yes | |
[spkg-install] checking for string.h... yes | |
[spkg-install] checking for inttypes.h... yes | |
[spkg-install] checking for stdint.h... yes | |
[spkg-install] checking for strings.h... yes | |
[spkg-install] checking for sys/stat.h... yes | |
[spkg-install] checking for sys/types.h... yes | |
[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking whether stripping libraries is possible... yes | |
[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
[spkg-install] checking whether to build static libraries... no | |
[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... yes | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for float.h... yes | |
[spkg-install] checking for limits.h... yes | |
[spkg-install] checking for stddef.h... yes | |
[spkg-install] checking for stdlib.h... (cached) yes | |
[spkg-install] checking for string.h... (cached) yes | |
[spkg-install] checking for sys/time.h... yes | |
[spkg-install] checking for stdint.h... (cached) yes | |
[spkg-install] checking for pthread.h... yes | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for a sed that does not truncate output... (cached) /opt/homebrew/bin/gsed | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
[spkg-install] checking whether g++ -std=gnu++11 supports C++11 features by default... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether to enable debugging options in the library... no | |
[spkg-install] checking whether to enable profiling everything in the library... no | |
[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking size of char... 1 | |
[spkg-install] checking size of short... 2 | |
[spkg-install] checking size of int... 4 | |
[spkg-install] checking size of long... 8 | |
[spkg-install] checking size of long long... 8 | |
[spkg-install] checking size of __int64_t... 8 | |
[spkg-install] checking for __int128_t... yes | |
[spkg-install] checking whether byte ordering is bigendian... no | |
[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
[spkg-install] checking whether to compile the drivers... no | |
[spkg-install] checking for pkg-config... /opt/homebrew/bin/pkg-config | |
[spkg-install] checking pkg-config is at least version 0.9.0... yes | |
[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for LAPACK in fflas-ffpack... no | |
[spkg-install] checking for NTL >= 5.0... not found | |
[spkg-install] checking for MPFR... not found | |
[spkg-install] checking for FPLLL >= 4.0.1... checking for IML... found | |
[spkg-install] checking for FLINT... >=2.4 not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether gnuplot works... yes | |
[spkg-install] checking whether ps2pdf works... yes | |
[spkg-install] checking if tinyxml2 is available... no | |
[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
[spkg-install] checking whether to build documentation... no | |
[spkg-install] checking whether dot works... yes | |
[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
[spkg-install] sed: 1: "doc/DoxyfileDev": extra characters at the end of d command | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for OpenCL... not found | |
[spkg-install] checking for MPI... not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] --------------------------------------- | |
[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
[spkg-install] config.status: creating linbox-config | |
[spkg-install] config.status: creating examples/Makefile | |
[spkg-install] config.status: creating examples/data/Makefile | |
[spkg-install] config.status: creating doc/Makefile | |
[spkg-install] config.status: creating linbox/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/dixon-solver/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/gauss/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/matrix-blas3/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/opencl-kernels/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/polynomial-matrix/Makefile | |
[spkg-install] config.status: creating linbox/blackbox/Makefile | |
[spkg-install] config.status: creating linbox/element/Makefile | |
[spkg-install] config.status: creating linbox/field/Makefile | |
[spkg-install] config.status: creating linbox/matrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sparsematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/densematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/matrixdomain/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sliced3/Makefile | |
[spkg-install] config.status: creating linbox/randiter/Makefile | |
[spkg-install] config.status: creating linbox/ring/Makefile | |
[spkg-install] config.status: creating linbox/ring/ntl/Makefile | |
[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
[spkg-install] config.status: creating linbox/solutions/Makefile | |
[spkg-install] config.status: creating linbox/solutions/solve/Makefile | |
[spkg-install] config.status: creating linbox/solutions/echelon/Makefile | |
[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
[spkg-install] config.status: creating linbox/polynomial/Makefile | |
[spkg-install] config.status: creating tests/Makefile | |
[spkg-install] config.status: creating tests/data/Makefile | |
[spkg-install] config.status: creating tests/matrix/Makefile | |
[spkg-install] config.status: creating interfaces/Makefile | |
[spkg-install] config.status: creating interfaces/driver/Makefile | |
[spkg-install] config.status: creating interfaces/maple/Makefile | |
[spkg-install] config.status: creating interfaces/kaapi/Makefile | |
[spkg-install] config.status: creating benchmarks/Makefile | |
[spkg-install] config.status: creating benchmarks/data/Makefile | |
[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m15.405s user 0m5.419s sys 0m5.078s | |
Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin dhcp-10-29-153-190.dyn.MIT.EDU 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
[spkg-install] checking for file... file | |
[spkg-install] checking for objdump... objdump | |
[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
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[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
[spkg-install] checking for stdlib.h... yes | |
[spkg-install] checking for string.h... yes | |
[spkg-install] checking for inttypes.h... yes | |
[spkg-install] checking for stdint.h... yes | |
[spkg-install] checking for strings.h... yes | |
[spkg-install] checking for sys/stat.h... yes | |
[spkg-install] checking for sys/types.h... yes | |
[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
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[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
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[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
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[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
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[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
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[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
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[spkg-install] checking for sys/time.h... yes | |
[spkg-install] checking for stdint.h... (cached) yes | |
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[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for a sed that does not truncate output... (cached) /opt/homebrew/bin/gsed | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
[spkg-install] checking whether g++ -std=gnu++11 supports C++11 features by default... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether to enable debugging options in the library... no | |
[spkg-install] checking whether to enable profiling everything in the library... no | |
[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking size of char... 1 | |
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[spkg-install] checking size of long long... 8 | |
[spkg-install] checking size of __int64_t... 8 | |
[spkg-install] checking for __int128_t... yes | |
[spkg-install] checking whether byte ordering is bigendian... no | |
[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
[spkg-install] checking whether to compile the drivers... no | |
[spkg-install] checking for pkg-config... /opt/homebrew/bin/pkg-config | |
[spkg-install] checking pkg-config is at least version 0.9.0... yes | |
[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for LAPACK in fflas-ffpack... no | |
[spkg-install] checking for NTL >= 5.0... not found | |
[spkg-install] checking for MPFR... not found | |
[spkg-install] checking for FPLLL >= 4.0.1... checking for IML... found | |
[spkg-install] checking for FLINT... >=2.4 not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether gnuplot works... yes | |
[spkg-install] checking whether ps2pdf works... yes | |
[spkg-install] checking if tinyxml2 is available... no | |
[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
[spkg-install] checking whether to build documentation... no | |
[spkg-install] checking whether dot works... yes | |
[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
[spkg-install] sed: 1: "doc/DoxyfileDev": extra characters at the end of d command | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for OpenCL... not found | |
[spkg-install] checking for MPI... not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] --------------------------------------- | |
[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
[spkg-install] config.status: creating linbox-config | |
[spkg-install] config.status: creating examples/Makefile | |
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[spkg-install] config.status: creating linbox/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/dixon-solver/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/gauss/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/matrix-blas3/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/opencl-kernels/Makefile | |
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[spkg-install] config.status: creating linbox/blackbox/Makefile | |
[spkg-install] config.status: creating linbox/element/Makefile | |
[spkg-install] config.status: creating linbox/field/Makefile | |
[spkg-install] config.status: creating linbox/matrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sparsematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/densematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/matrixdomain/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sliced3/Makefile | |
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[spkg-install] config.status: creating linbox/ring/Makefile | |
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[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
[spkg-install] config.status: creating linbox/solutions/Makefile | |
[spkg-install] config.status: creating linbox/solutions/solve/Makefile | |
[spkg-install] config.status: creating linbox/solutions/echelon/Makefile | |
[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
[spkg-install] config.status: creating linbox/polynomial/Makefile | |
[spkg-install] config.status: creating tests/Makefile | |
[spkg-install] config.status: creating tests/data/Makefile | |
[spkg-install] config.status: creating tests/matrix/Makefile | |
[spkg-install] config.status: creating interfaces/Makefile | |
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[spkg-install] config.status: creating interfaces/maple/Makefile | |
[spkg-install] config.status: creating interfaces/kaapi/Makefile | |
[spkg-install] config.status: creating benchmarks/Makefile | |
[spkg-install] config.status: creating benchmarks/data/Makefile | |
[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m10.408s user 0m4.718s sys 0m3.873s | |
Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin alpha.local 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
[spkg-install] checking for file... file | |
[spkg-install] checking for objdump... objdump | |
[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
[spkg-install] checking for mt... no | |
[spkg-install] checking if : is a manifest tool... no | |
[spkg-install] checking for dsymutil... dsymutil | |
[spkg-install] checking for nmedit... nmedit | |
[spkg-install] checking for lipo... lipo | |
[spkg-install] checking for otool... otool | |
[spkg-install] checking for otool64... no | |
[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
[spkg-install] checking for stdlib.h... yes | |
[spkg-install] checking for string.h... yes | |
[spkg-install] checking for inttypes.h... yes | |
[spkg-install] checking for stdint.h... yes | |
[spkg-install] checking for strings.h... yes | |
[spkg-install] checking for sys/stat.h... yes | |
[spkg-install] checking for sys/types.h... yes | |
[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking whether stripping libraries is possible... yes | |
[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
[spkg-install] checking whether to build static libraries... no | |
[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... yes | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for float.h... yes | |
[spkg-install] checking for limits.h... yes | |
[spkg-install] checking for stddef.h... yes | |
[spkg-install] checking for stdlib.h... (cached) yes | |
[spkg-install] checking for string.h... (cached) yes | |
[spkg-install] checking for sys/time.h... yes | |
[spkg-install] checking for stdint.h... (cached) yes | |
[spkg-install] checking for pthread.h... yes | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for a sed that does not truncate output... (cached) /opt/homebrew/bin/gsed | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
[spkg-install] checking whether g++ -std=gnu++11 supports C++11 features by default... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether to enable debugging options in the library... no | |
[spkg-install] checking whether to enable profiling everything in the library... no | |
[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking size of char... 1 | |
[spkg-install] checking size of short... 2 | |
[spkg-install] checking size of int... 4 | |
[spkg-install] checking size of long... 8 | |
[spkg-install] checking size of long long... 8 | |
[spkg-install] checking size of __int64_t... 8 | |
[spkg-install] checking for __int128_t... yes | |
[spkg-install] checking whether byte ordering is bigendian... no | |
[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
[spkg-install] checking whether to compile the drivers... no | |
[spkg-install] checking for pkg-config... /opt/homebrew/bin/pkg-config | |
[spkg-install] checking pkg-config is at least version 0.9.0... yes | |
[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for LAPACK in fflas-ffpack... no | |
[spkg-install] checking for NTL >= 5.0... not found | |
[spkg-install] checking for MPFR... not found | |
[spkg-install] checking for FPLLL >= 4.0.1... checking for IML... found | |
[spkg-install] checking for FLINT... >=2.4 not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether gnuplot works... yes | |
[spkg-install] checking whether ps2pdf works... yes | |
[spkg-install] checking if tinyxml2 is available... no | |
[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
[spkg-install] checking whether to build documentation... no | |
[spkg-install] checking whether dot works... yes | |
[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
[spkg-install] sed: 1: "doc/DoxyfileDev": extra characters at the end of d command | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for OpenCL... not found | |
[spkg-install] checking for MPI... not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] --------------------------------------- | |
[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
[spkg-install] config.status: creating linbox-config | |
[spkg-install] config.status: creating examples/Makefile | |
[spkg-install] config.status: creating examples/data/Makefile | |
[spkg-install] config.status: creating doc/Makefile | |
[spkg-install] config.status: creating linbox/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/dixon-solver/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/gauss/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/matrix-blas3/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/opencl-kernels/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/polynomial-matrix/Makefile | |
[spkg-install] config.status: creating linbox/blackbox/Makefile | |
[spkg-install] config.status: creating linbox/element/Makefile | |
[spkg-install] config.status: creating linbox/field/Makefile | |
[spkg-install] config.status: creating linbox/matrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sparsematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/densematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/matrixdomain/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sliced3/Makefile | |
[spkg-install] config.status: creating linbox/randiter/Makefile | |
[spkg-install] config.status: creating linbox/ring/Makefile | |
[spkg-install] config.status: creating linbox/ring/ntl/Makefile | |
[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
[spkg-install] config.status: creating linbox/solutions/Makefile | |
[spkg-install] config.status: creating linbox/solutions/solve/Makefile | |
[spkg-install] config.status: creating linbox/solutions/echelon/Makefile | |
[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
[spkg-install] config.status: creating linbox/polynomial/Makefile | |
[spkg-install] config.status: creating tests/Makefile | |
[spkg-install] config.status: creating tests/data/Makefile | |
[spkg-install] config.status: creating tests/matrix/Makefile | |
[spkg-install] config.status: creating interfaces/Makefile | |
[spkg-install] config.status: creating interfaces/driver/Makefile | |
[spkg-install] config.status: creating interfaces/maple/Makefile | |
[spkg-install] config.status: creating interfaces/kaapi/Makefile | |
[spkg-install] config.status: creating benchmarks/Makefile | |
[spkg-install] config.status: creating benchmarks/data/Makefile | |
[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m10.744s user 0m4.699s sys 0m3.792s | |
Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin alpha.local 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
[spkg-install] checking for file... file | |
[spkg-install] checking for objdump... objdump | |
[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
[spkg-install] checking for mt... no | |
[spkg-install] checking if : is a manifest tool... no | |
[spkg-install] checking for dsymutil... dsymutil | |
[spkg-install] checking for nmedit... nmedit | |
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[spkg-install] checking for otool64... no | |
[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
[spkg-install] checking for stdlib.h... yes | |
[spkg-install] checking for string.h... yes | |
[spkg-install] checking for inttypes.h... yes | |
[spkg-install] checking for stdint.h... yes | |
[spkg-install] checking for strings.h... yes | |
[spkg-install] checking for sys/stat.h... yes | |
[spkg-install] checking for sys/types.h... yes | |
[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking whether stripping libraries is possible... yes | |
[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
[spkg-install] checking whether to build static libraries... no | |
[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... yes | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
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[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
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[spkg-install] --------------------------------------- | |
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[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
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[spkg-install] checking for __int128_t... yes | |
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[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
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[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
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[spkg-install] --------------------------------------- | |
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[spkg-install] checking whether ps2pdf works... yes | |
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[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
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[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
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[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
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[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
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[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
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[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
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[spkg-install] config.status: creating benchmarks/Makefile | |
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[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -I/opt/homebrew/Cellar/openblas/0.3.28/include -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m10.749s user 0m4.750s sys 0m3.750s | |
Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin alpha.local 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
[spkg-install] checking for file... file | |
[spkg-install] checking for objdump... objdump | |
[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
[spkg-install] checking for mt... no | |
[spkg-install] checking if : is a manifest tool... no | |
[spkg-install] checking for dsymutil... dsymutil | |
[spkg-install] checking for nmedit... nmedit | |
[spkg-install] checking for lipo... lipo | |
[spkg-install] checking for otool... otool | |
[spkg-install] checking for otool64... no | |
[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
[spkg-install] checking for stdlib.h... yes | |
[spkg-install] checking for string.h... yes | |
[spkg-install] checking for inttypes.h... yes | |
[spkg-install] checking for stdint.h... yes | |
[spkg-install] checking for strings.h... yes | |
[spkg-install] checking for sys/stat.h... yes | |
[spkg-install] checking for sys/types.h... yes | |
[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking whether stripping libraries is possible... yes | |
[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
[spkg-install] checking whether to build static libraries... no | |
[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... yes | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for float.h... yes | |
[spkg-install] checking for limits.h... yes | |
[spkg-install] checking for stddef.h... yes | |
[spkg-install] checking for stdlib.h... (cached) yes | |
[spkg-install] checking for string.h... (cached) yes | |
[spkg-install] checking for sys/time.h... yes | |
[spkg-install] checking for stdint.h... (cached) yes | |
[spkg-install] checking for pthread.h... yes | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for a sed that does not truncate output... (cached) /opt/homebrew/bin/gsed | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
[spkg-install] checking whether g++ -std=gnu++11 supports C++11 features by default... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether to enable debugging options in the library... no | |
[spkg-install] checking whether to enable profiling everything in the library... no | |
[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking size of char... 1 | |
[spkg-install] checking size of short... 2 | |
[spkg-install] checking size of int... 4 | |
[spkg-install] checking size of long... 8 | |
[spkg-install] checking size of long long... 8 | |
[spkg-install] checking size of __int64_t... 8 | |
[spkg-install] checking for __int128_t... yes | |
[spkg-install] checking whether byte ordering is bigendian... no | |
[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
[spkg-install] checking whether to compile the drivers... no | |
[spkg-install] checking for pkg-config... /opt/homebrew/bin/pkg-config | |
[spkg-install] checking pkg-config is at least version 0.9.0... yes | |
[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for LAPACK in fflas-ffpack... no | |
[spkg-install] checking for NTL >= 5.0... not found | |
[spkg-install] checking for MPFR... not found | |
[spkg-install] checking for FPLLL >= 4.0.1... checking for IML... found | |
[spkg-install] checking for FLINT... >=2.4 not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether gnuplot works... yes | |
[spkg-install] checking whether ps2pdf works... yes | |
[spkg-install] checking if tinyxml2 is available... no | |
[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
[spkg-install] checking whether to build documentation... no | |
[spkg-install] checking whether dot works... yes | |
[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
[spkg-install] sed: 1: "doc/DoxyfileDev": extra characters at the end of d command | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for OpenCL... not found | |
[spkg-install] checking for MPI... not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] --------------------------------------- | |
[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
[spkg-install] config.status: creating linbox-config | |
[spkg-install] config.status: creating examples/Makefile | |
[spkg-install] config.status: creating examples/data/Makefile | |
[spkg-install] config.status: creating doc/Makefile | |
[spkg-install] config.status: creating linbox/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/dixon-solver/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/gauss/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/matrix-blas3/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/opencl-kernels/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/polynomial-matrix/Makefile | |
[spkg-install] config.status: creating linbox/blackbox/Makefile | |
[spkg-install] config.status: creating linbox/element/Makefile | |
[spkg-install] config.status: creating linbox/field/Makefile | |
[spkg-install] config.status: creating linbox/matrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sparsematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/densematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/matrixdomain/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sliced3/Makefile | |
[spkg-install] config.status: creating linbox/randiter/Makefile | |
[spkg-install] config.status: creating linbox/ring/Makefile | |
[spkg-install] config.status: creating linbox/ring/ntl/Makefile | |
[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
[spkg-install] config.status: creating linbox/solutions/Makefile | |
[spkg-install] config.status: creating linbox/solutions/solve/Makefile | |
[spkg-install] config.status: creating linbox/solutions/echelon/Makefile | |
[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
[spkg-install] config.status: creating linbox/polynomial/Makefile | |
[spkg-install] config.status: creating tests/Makefile | |
[spkg-install] config.status: creating tests/data/Makefile | |
[spkg-install] config.status: creating tests/matrix/Makefile | |
[spkg-install] config.status: creating interfaces/Makefile | |
[spkg-install] config.status: creating interfaces/driver/Makefile | |
[spkg-install] config.status: creating interfaces/maple/Makefile | |
[spkg-install] config.status: creating interfaces/kaapi/Makefile | |
[spkg-install] config.status: creating benchmarks/Makefile | |
[spkg-install] config.status: creating benchmarks/data/Makefile | |
[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m18.938s user 0m5.643s sys 0m5.100s | |
Using cached file /Applications/sage/upstream/linbox-1.7.0+sage-2024-05-18.tar.gz | |
Setting up build directory /Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 | |
Applying patches from ../patches... | |
Applying ../patches/292.patch | |
patching file tests/test-fft.C | |
Applying ../patches/294.patch | |
patching file benchmarks/benchmark-fft.C | |
patching file benchmarks/benchmark-polynomial-matrix-mul-fft.C | |
Applying ../patches/310-backport.patch | |
patching file linbox/matrix/sparsematrix/sparse-ell-matrix.h | |
patching file linbox/matrix/sparsematrix/sparse-ellr-matrix.h | |
Host system: Darwin alpha.local 24.4.0 Darwin Kernel Version 24.4.0: Fri Apr 11 18:32:50 PDT 2025; root:xnu-11417.101.15~117/RELEASE_ARM64_T6041 arm64 | |
C compiler: gcc, Apple clang version 17.0.0 (clang-1700.0.13.3), Target: arm64-apple-darwin24.4.0, Thread model: posix, InstalledDir: /Library/Developer/CommandLineTools/usr/bin | |
No stamp file for package 'linbox' in /Applications/sage/local/var/lib/sage/installed | |
No spkg-legacy-uninstall script; nothing to do | |
[spkg-install] Configuring linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] checking build system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking host system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking target system type... aarch64-apple-darwin24.4.0 | |
[spkg-install] checking for a BSD-compatible install... /opt/homebrew/bin/ginstall -c | |
[spkg-install] checking whether build environment is sane... yes | |
[spkg-install] checking for a race-free mkdir -p... /opt/homebrew/bin/gmkdir -p | |
[spkg-install] checking for gawk... gawk | |
[spkg-install] checking whether make sets $(MAKE)... yes | |
[spkg-install] checking whether make supports nested variables... yes | |
[spkg-install] checking whether the C++ compiler works... yes | |
[spkg-install] checking for C++ compiler default output file name... a.out | |
[spkg-install] checking for suffix of executables... | |
[spkg-install] checking whether we are cross compiling... no | |
[spkg-install] checking for suffix of object files... o | |
[spkg-install] checking whether the compiler supports GNU C++... yes | |
[spkg-install] checking whether g++ -std=gnu++11 accepts -g... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to enable C++11 features... none needed | |
[spkg-install] checking whether make supports the include directive... yes (GNU style) | |
[spkg-install] checking dependency style of g++ -std=gnu++11... none | |
[spkg-install] checking for gcc... gcc | |
[spkg-install] checking whether the compiler supports GNU C... yes | |
[spkg-install] checking whether gcc accepts -g... yes | |
[spkg-install] checking for gcc option to enable C11 features... none needed | |
[spkg-install] checking whether gcc understands -c and -o together... rm: conftest.dSYM: is a directory | |
[spkg-install] yes | |
[spkg-install] checking dependency style of gcc... none | |
[spkg-install] checking the archiver (ar) interface... ar | |
[spkg-install] checking how to print strings... printf | |
[spkg-install] checking for a sed that does not truncate output... /opt/homebrew/bin/gsed | |
[spkg-install] checking for grep that handles long lines and -e... /opt/homebrew/bin/ggrep | |
[spkg-install] checking for egrep... /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for fgrep... /opt/homebrew/bin/ggrep -F | |
[spkg-install] checking for ld used by gcc... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
[spkg-install] checking the name lister (/usr/bin/nm -B) interface... rm: conftest.dSYM: is a directory | |
[spkg-install] BSD nm | |
[spkg-install] checking whether ln -s works... yes | |
[spkg-install] checking the maximum length of command line arguments... 786432 | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to aarch64-apple-darwin24.4.0 format... func_convert_file_noop | |
[spkg-install] checking how to convert aarch64-apple-darwin24.4.0 file names to toolchain format... func_convert_file_noop | |
[spkg-install] checking for /Library/Developer/CommandLineTools/usr/bin/ld option to reload object files... -r | |
[spkg-install] checking for file... file | |
[spkg-install] checking for objdump... objdump | |
[spkg-install] checking how to recognize dependent libraries... pass_all | |
[spkg-install] checking for dlltool... no | |
[spkg-install] checking how to associate runtime and link libraries... printf %s\n | |
[spkg-install] checking for archiver @FILE support... rm: conftest.dSYM: is a directory | |
[spkg-install] no | |
[spkg-install] checking for strip... strip | |
[spkg-install] checking for ranlib... ranlib | |
[spkg-install] checking command to parse /usr/bin/nm -B output from gcc object... rm: conftest.dSYM: is a directory | |
[spkg-install] ok | |
[spkg-install] checking for sysroot... no | |
[spkg-install] checking for a working dd... /bin/dd | |
[spkg-install] checking how to truncate binary pipes... /bin/dd bs=4096 count=1 | |
[spkg-install] checking for mt... no | |
[spkg-install] checking if : is a manifest tool... no | |
[spkg-install] checking for dsymutil... dsymutil | |
[spkg-install] checking for nmedit... nmedit | |
[spkg-install] checking for lipo... lipo | |
[spkg-install] checking for otool... otool | |
[spkg-install] checking for otool64... no | |
[spkg-install] checking for -single_module linker flag... ld: warning: -single_module is obsolete | |
[spkg-install] no | |
[spkg-install] checking for -exported_symbols_list linker flag... yes | |
[spkg-install] checking for -force_load linker flag... yes | |
[spkg-install] checking for stdio.h... yes | |
[spkg-install] checking for stdlib.h... yes | |
[spkg-install] checking for string.h... yes | |
[spkg-install] checking for inttypes.h... yes | |
[spkg-install] checking for stdint.h... yes | |
[spkg-install] checking for strings.h... yes | |
[spkg-install] checking for sys/stat.h... yes | |
[spkg-install] checking for sys/types.h... yes | |
[spkg-install] checking for unistd.h... yes | |
[spkg-install] checking for dlfcn.h... yes | |
[spkg-install] checking for objdir... .libs | |
[spkg-install] checking if gcc supports -fno-rtti -fno-exceptions... yes | |
[spkg-install] checking for gcc option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if gcc PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if gcc static flag -static works... no | |
[spkg-install] checking if gcc supports -c -o file.o... yes | |
[spkg-install] checking if gcc supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the gcc linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking whether stripping libraries is possible... yes | |
[spkg-install] checking if libtool supports shared libraries... yes | |
[spkg-install] checking whether to build shared libraries... yes | |
[spkg-install] checking whether to build static libraries... no | |
[spkg-install] checking how to run the C++ preprocessor... g++ -std=gnu++11 -E | |
[spkg-install] checking for ld used by g++ -std=gnu++11... /Library/Developer/CommandLineTools/usr/bin/ld | |
[spkg-install] checking if the linker (/Library/Developer/CommandLineTools/usr/bin/ld) is GNU ld... no | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking for g++ -std=gnu++11 option to produce PIC... -fno-common -DPIC | |
[spkg-install] checking if g++ -std=gnu++11 PIC flag -fno-common -DPIC works... yes | |
[spkg-install] checking if g++ -std=gnu++11 static flag -static works... no | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... yes | |
[spkg-install] checking if g++ -std=gnu++11 supports -c -o file.o... (cached) yes | |
[spkg-install] checking whether the g++ -std=gnu++11 linker (/Library/Developer/CommandLineTools/usr/bin/ld) supports shared libraries... yes | |
[spkg-install] checking dynamic linker characteristics... darwin24.4.0 dyld | |
[spkg-install] checking how to hardcode library paths into programs... immediate | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for float.h... yes | |
[spkg-install] checking for limits.h... yes | |
[spkg-install] checking for stddef.h... yes | |
[spkg-install] checking for stdlib.h... (cached) yes | |
[spkg-install] checking for string.h... (cached) yes | |
[spkg-install] checking for sys/time.h... yes | |
[spkg-install] checking for stdint.h... (cached) yes | |
[spkg-install] checking for pthread.h... yes | |
[spkg-install] checking for egrep... (cached) /opt/homebrew/bin/ggrep -E | |
[spkg-install] checking for a sed that does not truncate output... (cached) /opt/homebrew/bin/gsed | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## START LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking for family name of compiler... clang | |
[spkg-install] checking whether g++ -std=gnu++11 supports C++11 features by default... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether to enable debugging options in the library... no | |
[spkg-install] checking whether to enable profiling everything in the library... no | |
[spkg-install] checking whether to enable warnings when compiling the library... no | |
[spkg-install] checking whether C++ compiler accepts -march=native... yes | |
[spkg-install] configure: "Adding '-march=native' to OPTIM_FLAGS" | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking size of char... 1 | |
[spkg-install] checking size of short... 2 | |
[spkg-install] checking size of int... 4 | |
[spkg-install] checking size of long... 8 | |
[spkg-install] checking size of long long... 8 | |
[spkg-install] checking size of __int64_t... 8 | |
[spkg-install] checking for __int128_t... yes | |
[spkg-install] checking whether byte ordering is bigendian... no | |
[spkg-install] --------------------------------------- | |
[spkg-install] Default path = /Applications/sage/local /usr /usr/local | |
[spkg-install] checking whether to compile the drivers... no | |
[spkg-install] checking for pkg-config... /opt/homebrew/bin/pkg-config | |
[spkg-install] checking pkg-config is at least version 0.9.0... yes | |
[spkg-install] checking for fflas-ffpack >= 2.5.0... yes | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for LAPACK in fflas-ffpack... no | |
[spkg-install] checking for NTL >= 5.0... not found | |
[spkg-install] checking for MPFR... not found | |
[spkg-install] checking for FPLLL >= 4.0.1... checking for IML... found | |
[spkg-install] checking for FLINT... >=2.4 not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking whether gnuplot works... yes | |
[spkg-install] checking whether ps2pdf works... yes | |
[spkg-install] checking if tinyxml2 is available... no | |
[spkg-install] configure: WARNING: tinyxml2 is not installed (no import/export of benchmarks). | |
[spkg-install] checking whether to build documentation... no | |
[spkg-install] checking whether dot works... yes | |
[spkg-install] sed: 1: "doc/Doxyfile": extra characters at the end of d command | |
[spkg-install] sed: 1: "doc/DoxyfileDev": extra characters at the end of d command | |
[spkg-install] --------------------------------------- | |
[spkg-install] checking for OpenCL... not found | |
[spkg-install] checking for MPI... not found | |
[spkg-install] --------------------------------------- | |
[spkg-install] --------------------------------------- | |
[spkg-install] LINBOX_CXXFLAGS = -O2 -march=native -Wall -DNDEBUG -UDEBUG | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] ## END LINBOX CONFIG ## | |
[spkg-install] ## --------------------------------------- ## | |
[spkg-install] checking that generated files are newer than configure... done | |
[spkg-install] configure: creating ./config.status | |
[spkg-install] config.status: creating Makefile | |
[spkg-install] config.status: creating linbox-config | |
[spkg-install] config.status: creating examples/Makefile | |
[spkg-install] config.status: creating examples/data/Makefile | |
[spkg-install] config.status: creating doc/Makefile | |
[spkg-install] config.status: creating linbox/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/dixon-solver/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/gauss/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/matrix-blas3/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/opencl-kernels/Makefile | |
[spkg-install] config.status: creating linbox/algorithms/polynomial-matrix/Makefile | |
[spkg-install] config.status: creating linbox/blackbox/Makefile | |
[spkg-install] config.status: creating linbox/element/Makefile | |
[spkg-install] config.status: creating linbox/field/Makefile | |
[spkg-install] config.status: creating linbox/matrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sparsematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/densematrix/Makefile | |
[spkg-install] config.status: creating linbox/matrix/matrixdomain/Makefile | |
[spkg-install] config.status: creating linbox/matrix/sliced3/Makefile | |
[spkg-install] config.status: creating linbox/randiter/Makefile | |
[spkg-install] config.status: creating linbox/ring/Makefile | |
[spkg-install] config.status: creating linbox/ring/ntl/Makefile | |
[spkg-install] config.status: creating linbox/ring/modular/Makefile | |
[spkg-install] config.status: creating linbox/solutions/Makefile | |
[spkg-install] config.status: creating linbox/solutions/solve/Makefile | |
[spkg-install] config.status: creating linbox/solutions/echelon/Makefile | |
[spkg-install] config.status: creating linbox/util/Makefile | |
[spkg-install] config.status: creating linbox/util/formats/Makefile | |
[spkg-install] config.status: creating linbox/vector/Makefile | |
[spkg-install] config.status: creating linbox/polynomial/Makefile | |
[spkg-install] config.status: creating tests/Makefile | |
[spkg-install] config.status: creating tests/data/Makefile | |
[spkg-install] config.status: creating tests/matrix/Makefile | |
[spkg-install] config.status: creating interfaces/Makefile | |
[spkg-install] config.status: creating interfaces/driver/Makefile | |
[spkg-install] config.status: creating interfaces/maple/Makefile | |
[spkg-install] config.status: creating interfaces/kaapi/Makefile | |
[spkg-install] config.status: creating benchmarks/Makefile | |
[spkg-install] config.status: creating benchmarks/data/Makefile | |
[spkg-install] config.status: creating benchmarks/matrix/Makefile | |
[spkg-install] config.status: creating linbox.pc | |
[spkg-install] config.status: creating config.h | |
[spkg-install] config.status: executing linbox/config.h commands | |
[spkg-install] config.status: creating linbox/config.h - prefix __LINBOX for config.h defines | |
[spkg-install] config.status: executing depfiles commands | |
[spkg-install] config.status: executing libtool commands | |
[spkg-install] configure: WARNING: unrecognized options: --disable-maintainer-mode, --disable-openmp | |
[spkg-install] Building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] make all-recursive | |
[spkg-install] Making all in linbox | |
[spkg-install] Making all in util | |
[spkg-install] Making all in formats | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o error.lo error.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c error.C -fno-common -DPIC -o .libs/error.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o debug.lo debug.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c debug.C -fno-common -DPIC -o .libs/debug.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libutil.la error.lo debug.lo | |
[spkg-install] libtool: link: ar cr .libs/libutil.a .libs/error.o .libs/debug.o | |
[spkg-install] libtool: link: ranlib .libs/libutil.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libutil.la" && ln -s "../libutil.la" "libutil.la" ) | |
[spkg-install] Making all in element | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in field | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in randiter | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o mersenne-twister.lo mersenne-twister.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c mersenne-twister.C -fno-common -DPIC -o .libs/mersenne-twister.o | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=link g++ -std=gnu++11 -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -L/Applications/sage/local/lib -L/Applications/sage/local/lib -o libranditer.la mersenne-twister.lo | |
[spkg-install] libtool: link: ar cr .libs/libranditer.a .libs/mersenne-twister.o | |
[spkg-install] libtool: link: ranlib .libs/libranditer.a | |
[spkg-install] libtool: link: ( cd ".libs" && rm -f "libranditer.la" && ln -s "../libranditer.la" "libranditer.la" ) | |
[spkg-install] Making all in vector | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix | |
[spkg-install] Making all in sparsematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in densematrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrixdomain | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in sliced3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] make[9]: Nothing to be done for `all-am'. | |
[spkg-install] Making all in blackbox | |
[spkg-install] make[8]: Nothing to be done for `all'. | |
[spkg-install] Making all in algorithms | |
[spkg-install] Making all in dixon-solver | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in gauss | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in opencl-kernels | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in matrix-blas3 | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] Making all in polynomial-matrix | |
[spkg-install] make[9]: Nothing to be done for `all'. | |
[spkg-install] /bin/bash ../../libtool --tag=CXX --mode=compile g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c -o diophantine-solver.lo diophantine-solver.C | |
[spkg-install] libtool: compile: g++ -std=gnu++11 -DHAVE_CONFIG_H -I. -I../.. -I../.. -DDISABLE_COMMENTATOR -O2 -march=native -Wall -DNDEBUG -UDEBUG -DFFLAS_COMPILED -DFFPACK_COMPILED -I/Applications/sage/local/include -g -O2 -c diophantine-solver.C -fno-common -DPIC -o .libs/diophantine-solver.o | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:25: | |
[spkg-install] In file included from ../../linbox/field/field-traits.h:30: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular.h:21: | |
[spkg-install] In file included from /Applications/sage/local/include/givaro/modular-integral.h:120: | |
[spkg-install] /Applications/sage/local/include/givaro/modular-mulprecomp.inl:49:12: warning: variable 'bitsizep' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 49 | size_t bitsizep(0); | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:42: | |
[spkg-install] In file included from ../../linbox/vector/blas-vector.h:47: | |
[spkg-install] ../../linbox/vector/blas-subvector.h:121:20: error: no member named 'data' in 'BlasSubvector<_Vector>' | |
[spkg-install] 121 | _ptr(V.data()+beg), _size(dim), _inc(inc), _field(&V.field()) {} | |
[spkg-install] | ~ ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:43: | |
[spkg-install] In file included from ../../linbox/vector/stream.h:872: | |
[spkg-install] In file included from ../../linbox/vector/stream-gf2.h:77: | |
[spkg-install] ../../linbox/field/gf2.h:984:29: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 984 | return r ^= a & static_cast<bool>(x); | |
[spkg-install] | ^~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:984:29: note: cast one or both operands to int to silence this warning | |
[spkg-install] ../../linbox/field/gf2.h:995:33: warning: use of bitwise '&' with boolean operands [-Wbitwise-instead-of-logical] | |
[spkg-install] 995 | return r = r ^ (a & static_cast<bool>(x)); | |
[spkg-install] | ~^~~~~~~~~~~~~~~~~~~~~~~~~ | |
[spkg-install] | && | |
[spkg-install] ../../linbox/field/gf2.h:995:33: note: cast one or both operands to int to silence this warning | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1983: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_charpoly.inl:193:20: warning: variable 'nbfac' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 193 | size_t nbfac = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:41: | |
[spkg-install] In file included from ../../linbox/solutions/methods.h:26: | |
[spkg-install] In file included from ../../linbox/matrix/dense-matrix.h:85: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-matrix.h:50: | |
[spkg-install] In file included from ../../linbox/matrix/densematrix/blas-submatrix.h:36: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/fflas-ffpack.h:35: | |
[spkg-install] In file included from /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack.h:1987: | |
[spkg-install] /Applications/sage/local/include/fflas-ffpack/ffpack/ffpack_permutation.inl:60:16: warning: variable 'nonpivrowstomove' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 60 | size_t nonpivrowstomove = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:44: | |
[spkg-install] In file included from ../../linbox/blackbox/lambda-sparse.h:29: | |
[spkg-install] In file included from ../../linbox/matrix/sparse-matrix.h:82: | |
[spkg-install] In file included from ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.h:207: | |
[spkg-install] ../../linbox/matrix/sparsematrix/sparse-map-map-matrix.inl:414:6: warning: variable 'count' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 414 | int count=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:330:16: warning: variable 'nbp' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 330 | size_t nbp=0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:26: | |
[spkg-install] In file included from ../../linbox/algorithms/lifting-container.h:45: | |
[spkg-install] In file included from ../../linbox/algorithms/block-massey-domain.h:42: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/order-basis.h:41: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/polynomial-matrix-domain.h:34: | |
[spkg-install] In file included from ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft.h:373: | |
[spkg-install] ../../linbox/algorithms/polynomial-matrix/matpoly-mult-fft-wordsize.inl:61:20: warning: variable 'lpts' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 61 | size_t lpts = 0; | |
[spkg-install] | ^ | |
[spkg-install] In file included from diophantine-solver.C:26: | |
[spkg-install] In file included from ../../linbox/algorithms/diophantine-solver.h:29: | |
[spkg-install] In file included from ../../linbox/algorithms/rational-solver.h:583: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/dixon-solver-dense.h:363: | |
[spkg-install] In file included from ../../linbox/algorithms/./dixon-solver/./dixon-solver-dense.inl:28: | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:339:8: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 339 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] ../../linbox/algorithms/rational-reconstruction.h:924:29: warning: variable 'counter' set but not used [-Wunused-but-set-variable] | |
[spkg-install] 924 | int counter=0; | |
[spkg-install] | ^ | |
[spkg-install] 10 warnings and 1 error generated. | |
[spkg-install] make[9]: *** [diophantine-solver.lo] Error 1 | |
[spkg-install] make[8]: *** [all-recursive] Error 1 | |
[spkg-install] make[7]: *** [all-recursive] Error 1 | |
[spkg-install] make[6]: *** [all-recursive] Error 1 | |
[spkg-install] make[5]: *** [all] Error 2 | |
[spkg-install] ******************************************************************************** | |
[spkg-install] Error building linbox-1.7.0+sage-2024-05-18 | |
[spkg-install] ******************************************************************************** | |
************************************************************************ | |
Error installing package linbox-1.7.0+sage-2024-05-18 | |
************************************************************************ | |
Please email sage-devel (http://groups.google.com/group/sage-devel) | |
explaining the problem and including the log files | |
/Applications/sage/logs/pkgs/linbox-1.7.0+sage-2024-05-18.log | |
and | |
/Applications/sage/config.log | |
Describe your computer, operating system, etc. | |
If you want to try to fix the problem yourself, *don't* just cd to | |
/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18 and type 'make' or whatever is appropriate. | |
Instead, the following commands setup all environment variables | |
correctly and load a subshell for you to debug the error: | |
(cd '/Applications/sage/local/var/tmp/sage/build/linbox-1.7.0+sage-2024-05-18' && '/Applications/sage/sage' --buildsh) | |
When you are done debugging, you can type "exit" to leave the subshell. | |
************************************************************************ | |
real 0m12.941s user 0m5.103s sys 0m4.527s |
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