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#!/bin/bash | |
MINICONDADIR=/home/gdetoni/Applications/miniconda3 | |
sudo apt install libhdf5-dev | |
conda create --name test_gsoc python=3.5 -y | |
conda activate test_gsoc | |
conda install numpy | |
cmake \ |
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mkdir roadrunner && cd roadrunner/ | |
#sudo apt-get update | |
#sudo apt-get install git g++-5 cmake make wget | |
#sudo apt-get install llvm-3.5 llvm-3.5-dev | |
#sudo apt-get install libbz2-1.0 libbz2-dev zlibc libxml2-dev libz-dev | |
#sudo apt-get install libncurses5-dev | |
#export CC=gcc-5 | |
#export CXX=g++-5 |
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execve("/home/travis/.bdm/third_party/paraview/bin/pvpython", ["pvpython", "../include/core/visualization/ge"..., "output/N3bdm52CatalystAdaptorTes"...], [/* 152 vars */]) = 0 | |
brk(NULL) = 0x89a000 | |
access("/etc/ld.so.nohwcap", F_OK) = -1 ENOENT (No such file or directory) | |
mmap(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0x7f927fc90000 | |
access("/etc/ld.so.preload", R_OK) = -1 ENOENT (No such file or directory) | |
open("/home/travis/.bdm/third_party/qt/lib/tls/x86_64/libc.so.6", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory) | |
stat("/home/travis/.bdm/third_party/qt/lib/tls/x86_64", 0x7ffe42c76390) = -1 ENOENT (No such file or directory) | |
open("/home/travis/.bdm/third_party/qt/lib/tls/libc.so.6", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory) | |
stat("/home/travis/.bdm/third_party/qt/lib/tls", 0x7ffe42c76390) = -1 ENOENT (No such file or directory) | |
open("/home/travis/.bdm/third_party/qt/lib/x86_64/libc.so.6", O_RDONLY|O_CLOEXEC) = - |
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execve("/home/travis/build/BioDynaMo/biodynamo/build/install/third_party/paraview/bin/pvpython", ["pvpython", "../src/core/visualization/genera"..., "output/N3bdm52CatalystAdaptorTes"...], [/* 152 vars */]) = 0 | |
brk(NULL) = 0xbb8000 | |
access("/etc/ld.so.nohwcap", F_OK) = -1 ENOENT (No such file or directory) | |
mmap(NULL, 4096, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0x7f8d974f4000 | |
access("/etc/ld.so.preload", R_OK) = -1 ENOENT (No such file or directory) | |
open("/home/travis/build/BioDynaMo/biodynamo/build/install/third_party/qt/lib/tls/x86_64/libc.so.6", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory) | |
stat("/home/travis/build/BioDynaMo/biodynamo/build/install/third_party/qt/lib/tls/x86_64", 0x7ffe6b614520) = -1 ENOENT (No such file or directory) | |
open("/home/travis/build/BioDynaMo/biodynamo/build/install/third_party/qt/lib/tls/libc.so.6", O_RDONLY|O_CLOEXEC) = -1 ENOENT (No such file or directory) | |
stat("/home/travis/build/BioDynaMo/biodynamo/build |
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#include <shogun/base/init.h> | |
#include <shogun/base/some.h> | |
#include <shogun/distance/Distance.h> | |
#include <shogun/features/Features.h> | |
#include <shogun/io/File.h> | |
#include <shogun/io/SerializableAsciiFile.h> | |
#include <shogun/lib/DynamicObjectArray.h> | |
#include <shogun/lib/SGMatrix.h> | |
#include <shogun/lib/SGVector.h> | |
#include <shogun/lib/observers/ParameterObserver.h> |
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# Beta0 e Beta predetti | |
0.057167247685 | |
[ 0. -0. -0. 0. 0. -0. -0. 0. -0. 0.] | |
# Beta0 e Beta reali usati dal generatore | |
[ 0.04515583] | |
[-0.012569 0.058881 0.138457 -0.021287 -0.021285 0.143565 0.069767 | |
-0.042679 0.049324 -0.042129] |
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from matplotlib import pyplot as plt | |
from matplotlib import animation | |
from shogun import csv_file, features, labels, machine, parameter_observer | |
f_feats_train = csv_file("classifier_binary_2d_linear_features_train.dat") | |
f_feats_test = csv_file("classifier_binary_2d_linear_features_test.dat") | |
f_labels_train = csv_file("classifier_binary_2d_linear_labels_train.dat") | |
f_labels_test = csv_file("classifier_binary_2d_linear_labels_test.dat") | |
features_train = features(f_feats_train) |
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/******/ | |
/* How observable parameters can be registered*/ | |
/******/ | |
MyFabulousMachine::init() | |
{ | |
// Register standard parameters | |
SG_ADD(&m_w, "weights", "Model weigths", ParameterProperties::MODEL); | |
// Version A: Register observable parameters. The user could then get a list | |
// (vector) of the parameters he can observe inside this model. Only the parameters |
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#include <shogun/features/DenseFeatures.h> | |
#include <shogun/lib/SGMatrix.h> | |
#include <shogun/regression/LeastAngleRegression.h> | |
#include <shogun/labels/RegressionLabels.h> | |
#include <shogun/mathematics/linalg/LinalgNamespace.h> | |
#include <shogun/preprocessor/PruneVarSubMean.h> | |
#include <shogun/preprocessor/NormOne.h> | |
#include <shogun/lib/parameter_observers/ParameterObserverLogger.h> | |
#include <shogun/base/init.h> | |
#include <shogun/lib/common.h> |
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#!/bin/bash | |
USER=$1 | |
PASS=$2 | |
usermod --password $(echo $PASS | openssl passwd -1 -stdin) $USER |
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