golobor

class dotdict(dict):
    '''A dict with dot access and autocompletion.
    
    The idea and most of the code was taken from 
    http://stackoverflow.com/a/23689767,
    http://code.activestate.com/recipes/52308-the-simple-but-handy-collector-of-a-bunch-of-named/
    http://stackoverflow.com/questions/2390827/how-to-properly-subclass-dict-and-override-get-set
    '''
    
    def __init__(self,*a,**kw):

golobor

def gridspec_inches(
    wcols,
    hrows,
    fig_kwargs={}):

    import matplotlib as mpl
    import matplotlib.pyplot as plt

    fig_height_inches = (
        sum(hrows)

golobor

golobor

import bpy
import mathutils
import numpy as np

def add_curve(
        coords,
        thickness = 0.2,
        name='polymer', 
        resolution=4,
        kind='BEZIER'):

golobor

golobor

golobor

#!/bin/sh
if ! type "efetch" > /dev/null; then
  print "Please install E-utilitie."
fi

GSM_LIST=$1
GSMs=`cat $GSM_LIST|cut -f1`
#echo $SRRs 
! type "foo" > /dev/null 2>&1;
for GSM in $GSMs; do

golobor

import subprocess
import shutil
import argparse
import pathlib

parser = argparse.ArgumentParser(description='Download all SRAs from a GSM.')
parser.add_argument('GSMs', metavar='GSMs', type=str, nargs='+',
                   help='GSMs to download, can be more than one')
parser.add_argument('-g', '--guess-title',
                   help='If specified, guess the title of each GSMs and use it to store SRRs',

golobor

golobor