Greg Caporaso gregcaporaso

## mgrast_fnas_to_qiime_fna.py
#!/usr/bin/env python
# File created on 26 Jun 2012
from __future__ import division

__author__ = "Greg Caporaso"
__copyright__ = "Copyright 2011, The QIIME project"
__credits__ = ["Greg Caporaso"]
__license__ = "GPL"
__version__ = "1.5.0-dev"
__maintainer__ = "Greg Caporaso"

## summarize_barcodes.py
#!/usr/bin/env python
# File created on 03 Jul 2012
from __future__ import division

__author__ = "Greg Caporaso"
__copyright__ = "Copyright 2011, The QIIME project"
__credits__ = ["Greg Caporaso"]
__license__ = "GPL"
__version__ = "1.5.0-dev"
__maintainer__ = "Greg Caporaso"

## qiime_to_humann.py
#!/usr/bin/env python
# File created on 19 Jul 2012
from __future__ import division

__author__ = "Greg Caporaso"
__copyright__ = "Copyright 2011, The QIIME project"
__credits__ = ["Greg Caporaso"]
__license__ = "GPL"
__version__ = "1.5.0-dev"
__maintainer__ = "Greg Caporaso"

## cloud_demo_complete.ipynb

      
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                gregcaporaso
                / cloud_demo_complete.ipynb
            
            
              Created
              September 10, 2012 20:06
            
              
                IPython notebooks corresponding to Reagan et al, ISME Journal 2012
              
          
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## compare_categories.py
#!/usr/bin/env python
from __future__ import division

__author__ = "Logan Knecht"
__copyright__ = "Copyright 2012, The QIIME project"
__credits__ = ["Logan Knecht", "Michael Dwan", "Damien Coy", "Jai Ram Rideout",
               "Levi McCracken"]
__license__ = "GPL"
__version__ = "1.5.0-dev-svn3058-bugfix"
__maintainer__ = "Jai Ram Rideout"

## test.txt
test

## gmail.py
import os.path
import smtplib
from email.MIMEMultipart import MIMEMultipart
from email.MIMEBase import MIMEBase
from email.MIMEText import MIMEText
from email import Encoders

def mail(to, subject, text, mail_user, mail_password, attach=None):
   msg = MIMEMultipart()

## mapper-comparison-notes.ipynb

      
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                gregcaporaso
                / mapper-comparison-notes.ipynb
            
            
              Created
              October 3, 2012 02:23
            
              
                Comparison of several features of tools for mapping DNA reads to a DNA reference database
              
          
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## README.md

      
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                gregcaporaso
                / README.md
            
            
              Created
              October 10, 2012 16:17
            
              
                Script for running merge_otu_tables.py in parallel
              
          
    Code for merging OTU tables in parallel. This code was written by Daniel McDonald.

  
## another_file.md

      
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                gregcaporaso
                / another_file.md
            
            
              Created
              October 15, 2012 21:53
            
              
                code sprint notes
              
          
    some other information.
	#!/usr/bin/env python
	# File created on 26 Jun 2012
	from __future__ import division

	__author__ = "Greg Caporaso"
	__copyright__ = "Copyright 2011, The QIIME project"
	__credits__ = ["Greg Caporaso"]
	__license__ = "GPL"
	__version__ = "1.5.0-dev"
	__maintainer__ = "Greg Caporaso"
	#!/usr/bin/env python
	# File created on 03 Jul 2012
	from __future__ import division

	__author__ = "Greg Caporaso"
	__copyright__ = "Copyright 2011, The QIIME project"
	__credits__ = ["Greg Caporaso"]
	__license__ = "GPL"
	__version__ = "1.5.0-dev"
	__maintainer__ = "Greg Caporaso"
	#!/usr/bin/env python
	# File created on 19 Jul 2012
	from __future__ import division

	__author__ = "Greg Caporaso"
	__copyright__ = "Copyright 2011, The QIIME project"
	__credits__ = ["Greg Caporaso"]
	__license__ = "GPL"
	__version__ = "1.5.0-dev"
	__maintainer__ = "Greg Caporaso"
	#!/usr/bin/env python
	from __future__ import division

	__author__ = "Logan Knecht"
	__copyright__ = "Copyright 2012, The QIIME project"
	__credits__ = ["Logan Knecht", "Michael Dwan", "Damien Coy", "Jai Ram Rideout",
	"Levi McCracken"]
	__license__ = "GPL"
	__version__ = "1.5.0-dev-svn3058-bugfix"
	__maintainer__ = "Jai Ram Rideout"
	import os.path
	import smtplib
	from email.MIMEMultipart import MIMEMultipart
	from email.MIMEBase import MIMEBase
	from email.MIMEText import MIMEText
	from email import Encoders

	def mail(to, subject, text, mail_user, mail_password, attach=None):
	msg = MIMEMultipart()