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hisplan/how-to-install-bgzip-via-htslib.md

Last active July 26, 2019 14:36
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bgzip via htslib
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how-to-install-bgzip-via-htslib.md 
sudo yum install git autoconf automake make gcc zlib-devel bzip2-devel xz-devel curl-devel openssl-devel
git clone https://github.com/samtools/htslib.git
cd htslib/
autoconf
autoheader
./configure
make
make test
sudo make install
bgzip -i genome.fa
samtools faidx genome.fa.gz
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