Helper script that downloads the 2D 3T3 RandTag Set 1 dataset from the Murphy Lab at Carnegie Mellon University

script.sh

#!/bin/bash
 
echo "*********************"
echo "* LICENSE AGREEMENT *"
echo "*********************"
echo "All data downloaded from the Murphy Lab web site (http://murphylab.web.cmu.edu) remain the property of the 
Murphy" 
echo "Lab. You are granted a non-exclusive license to use these images for non-commercial, research purposes, with the" 
echo "following conditions: (a) you agree to include a reference to"
echo ""
echo "E. Garcia Osuna, J. Hua, N.W. Bateman, T. Zhao, P.B. Berget and R.F. Murphy (2007). Large-Scale Automated Analysis of Protein Subcellular Location Patterns in Randomly-Tagged 3T3 Cells. Annals Biomed. Eng. 35:1081-1087."
echo ""
echo "when presenting or publishing your results, (b) you agree to send a copy of any paper or abstract (upon its"
echo "acceptance for publication or presentation) by FAX, email or regular mail to Dr. Murphy, and (c) you agree not to "
echo "distribute these images without inclusion of this notice."
 
echo "Dr. Robert F. Murphy"
echo "Professor of Biological Sciences, Biomedical Engineering and Machine Learning"
echo "Carnegie Mellon University"
echo "4400 Fifth Ave., Pittsburgh, PA 15213"
echo "FAX: 412-268-6571"
echo "email: murphy@cmu.edu"
echo ""
 
WEBSITE="http://murphylab.web.cmu.edu/data/pslid"
 
FILES=("F_Images.tgz" "H_Images.tgz" "IandControl_Images.tar.gz")
 
for FILE in "${FILES[@]}"
do
	echo Downloading "$WEBSITE"/"$FILE" to `pwd`
	wget --quiet -nc "$WEBSITE"/"$FILE"
	echo "Decompressing" "$FILE"
	tar -xf $FILE
	echo "Removing file" "$FILE"
	rm -fv $FILE
done