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{
  "comment": "If you've gotten here by mistake, this is the JSON data used by our pricing calculator. It is helpful for developers. Go to https://cloud.google.com/products/calculator/ to get back to our web calculator.",
  "version": "v1.13",
  "updated": "01-August-2017",
  "gcp_price_list": {
    "sustained_use_base": 0.25,
    "sustained_use_tiers": {
      "0.25": 1.0,
      "0.50": 0.8,
      "0.75": 0.6,

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# Using OpenJDK 8
FROM broadinstitute/gatk:gatkbase-1.2.3
ARG DRELEASE

ADD . /gatk

WORKDIR /gatk
RUN /gatk/gradlew clean compileTestJava sparkJar localJar createPythonPackageArchive -Drelease=$DRELEASE

WORKDIR /root

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Common Lisp Scripting with Roswell

"Roswell Script" is implementation-independent Common Lisp scripting program which uses Roswell. Although Roswell itself is a unified interface to Common Lisp implementations, it also encourages writing scripts with it.

To start writing it, run ros init in your terminal:

$ ros init
Usage: ros init [template] name [options...]

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import
  asyncdispatch, asyncnet, htmlparser, xmltree, httpclient, strutils,
  strtabs, streams, uri, sets

var visited = initSet[string]()

proc crawl(url: string, client: PAsyncHttpClient = newAsyncHttpClient()) {.async.} =
  if url in visited: return # Already visited this URL.
  echo("Crawling ", url)
  visited.incl(url)

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Editing remote files in Vim with SSH

1. Configure SSH

   In ~/.ssh/config, include the lines:

   Host *
   ControlPath ~/.ssh/sockets/%r@%h-%p
   

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.vimrc
" Map leader to comma
let maplocalleader=","

" Toggle this for vim-sexp to not go into insert mode after wrapping something
let g:sexp_insert_after_wrap = 0
" Toggle this to disable automatically creating closing brackets and quotes
let g:sexp_enable_insert_mode_mappings = 1

Vocab

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Prereqs

These are for the combined vim-sexp (https://github.com/guns/vim-sexp) and vim-sexp-mappings-for-regular-people (https://github.com/tpope/vim-sexp-mappings-for-regular-people) plugins. vim-sexp is neat on its own but Tim Pope makes common stuff much easier.

Note that some vim-sexp functionality depends on <LocalLeader> mappings. This is a different leader key than the global leader, and is the variable maplocalleader (instead of mapleader). To see if you have this set, use :echo maplocalleader; if it errors out you'll need to set it, otherwise it will echo the key. If you want to set your LocalLeader to <Space>, you'll need two commands in your .vimrc, since by default <Space> is bound to <Right> in normal mode:

nnoremap <Space> <Nop>
let maplocalleader=" "

TOC

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fireplace

• cpr => (require ... :reload)
• cpR => (require ... :reload-all)

Evaluation

• :Eval (clojure code) => runs (clojure code) in repl
• cpp => evaluate inn-most expessions under cursor
• cp<movement> => evaluate text described by <movement>
• cqp => opens quasi-repl
• cqc => quasi-repl command line window

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#!/bin/bash

set -eo pipefail

# http://stackoverflow.com/questions/9893667/is-there-a-way-to-write-a-bash-function-which-aborts-the-whole-execution-no-mat
trap "exit 1" TERM
export TOP_PID=$$

BGZIP=/gscmnt/gc2802/halllab/idas/software/local/bin/bgzip
TABIX=/gscmnt/gc2802/halllab/idas/software/local/bin/tabix

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#!/bin/bash

set -eo pipefail

# http://stackoverflow.com/questions/9893667/is-there-a-way-to-write-a-bash-function-which-aborts-the-whole-execution-no-mat
trap "exit 1" TERM
export TOP_PID=$$

BGZIP=/gscmnt/gc2802/halllab/idas/software/local/bin/bgzip
TABIX=/gscmnt/gc2802/halllab/idas/software/local/bin/tabix