ivan-krukov

numbers.so: numbers.c
	gcc --std=c99 -fPIC -c numbers.c
	gcc -shared numbers.o -o numbers.so
clean:
	rm -f numbers.o numbers.so

ivan-krukov

[map(float,a.split(" ")) for a in data.split("\n")]

ivan-krukov

# Maintainer: Lucas Hermann Negri <lucashnegri@gmail.com>
# Contributor: shacristo

pkgname=armadillo
pkgver=4.300.8
pkgrel=1
pkgdesc="C++ linear algebra library"
arch=('i686' 'x86_64')
url="http://arma.sourceforge.net/"
license=('MPL 2.0')

ivan-krukov

//A little function to allocate a length-1 sds from a char
//This is a little nasty, since we would need a lot of tiny mallocs if we do this often
sds sdsnewchar(char c) {
  //Do some dirty allocations to save the char
  char *ch = (char*)malloc(2*sizeof(char)); //culprit of small size allocation - could pre-allocate if we do this often
  ch[0] = c;
  ch[1] = '\0'; //zero-termination
  sds str = sdsnew(ch); //new sds item, copied
  free(ch); //sdsnew copies the content, so we can free
  return str;

ivan-krukov

#include "list.h"

list* list_init() {
	list* ls = (list*)malloc(sizeof(list));
	ls->head = (list_node*)malloc(sizeof(list_node));
	ls->cursor = ls->head;
	ls->head->data = NULL;
	ls->dealloc = NULL;
	ls->copy = NULL;
	return ls;

ivan-krukov

#/usr/bin/perl

use strict;
use warnings;

#The names of the input files are provided on the command line
if (@ARGV == 2) {
	# Read input files

	my $ids_file = $ARGV[0];

ivan-krukov

sub codon_sequence {
    my ($self, $n) = @_;
    my ( $r, @s );
    for my $i ( 0 .. 2 ) {
        $r = $n % 4;
        $n = $n >> 2;
        unshift( @s, $nucleotides[$r] );
    }
    return join( '', @s );
}

ivan-krukov

package Imports;
strict->import();
warnings->import(qw(FATAL));
5.010_000->import();
utf8->import();
1;

ivan-krukov

typedef struct datum {
	int number;
} datum;

typedef datum * table;

TYPEMAP: <<END
table	T_PTRREF
END

ivan-krukov

#include <stdlib.h>
#include <stdio.h>
#include <fcntl.h>
#include <string.h>
#include <sys/mman.h>
#include <sys/stat.h>

/**
 * Median calculation
 * This program takes an input file with one number per line and calculates mean and median.