jamescasbon

doctype 5
html ->
  head ->
    title 'Title'
    meta name: 'viewport', content: "width:device-width, initial-scale:1.0"
    meta name: 'description', content: ""
    meta name: 'author', content: ""

    link href: 'bootstrap/css/bootstrap.css', rel: 'stylesheet'
    link href: 'bootstrap/css/bootstrap-responsive.css', rel: 'stylesheet'

jamescasbon

1

jamescasbon

/*
Hello, this is Dog
------------------

Lets talk about cells.*/

// code cell
print(84);

jamescasbon

String file contents

jamescasbon

import redis
import inspect

class RedisPlugin(object):
    name = 'redis'

    def __init__(self,host='localhost',port=6379,database=0,keyword='rdb'):
      self.host = host
      self.port = port
      self.database = database

jamescasbon

Feature: Mail
    In order to handle mail

    Scenario: Mail relay
        Given I am a production server
        And I am not a mail server 
        Then I should have postfix installed
        And I should have a mail relay to mail.example.org

    Scenario: Mail server

jamescasbon

from lettuce import *
from fabric import api
from fabric.api import env
import socket


servers = {
        'xxx.local': {
            'ip': ' xxxx',
            'roles': ['production']

jamescasbon

d = Doc()
with d.html: 

    with d.head:
        d.title ('example page')
        d.link  (rel='stylesheet', href='/style.css', type='text/css')
    
    with d.body (style='foo'):
        d.a ('other stuff on another page', href='/other.html')

jamescasbon

#!/usr/bin/env python
""" Melt a VCF file into a tab delimited set of calls, one per line

VCF files have all the calls from different samples on one line.  This 
script reads vcf on stdin and writes all calls to stdout in tab delimited 
format with one call in one sample per line.  This makes it easy to find 
a given sample's genotype with, say, grep.
"""

import sys

jamescasbon

$ make
cd ../bamtools && mkdir -p build && cd build && cmake .. && make
-- Configuring done
-- Generating done
-- Build files have been written to: /home/james/src/freebayes/bamtools/build
make[1]: Entering directory `/home/james/src/freebayes/bamtools/build'
make[2]: Entering directory `/home/james/src/freebayes/bamtools/build'
make[3]: Entering directory `/home/james/src/freebayes/bamtools/build'
make[3]: Leaving directory `/home/james/src/freebayes/bamtools/build'
make[3]: Entering directory `/home/james/src/freebayes/bamtools/build'