Created
January 23, 2019 15:16
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Quick reprex for @ jess_carilli
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#some libraries | |
library(dplyr) | |
library(tidyr) | |
library(broom) | |
library(purrr) | |
#let's use the npk data | |
head(npk) | |
#but make up a few extra columns | |
set.seed(2019) | |
npk <- npk %>% | |
mutate(yield2 = rnorm(n()), | |
some_variable = rnorm(n())) | |
head(npk) | |
#now, let's automate some modeling | |
npk_aov <- npk %>% | |
#reshape so all responses are in the same column | |
gather(response_type, value, yield:some_variable) %>% | |
#group by response | |
group_by(response_type) %>% | |
#nest the data | |
nest() %>% | |
#fit models for each response | |
mutate(mod = map(data, ~lm(value ~ block + N * P + K, data = .))) %>% | |
#extract the anova info | |
mutate(anova_tables = map(mod, car::Anova)) %>% | |
#make it pretty | |
mutate(nice_anova = map(anova_tables, tidy)) %>% | |
#unnest! | |
unnest(nice_anova) | |
#what did we get? | |
npk_aov | |
#let's just look at the N effect | |
npk_aov %>% filter(term == "N") | |
#what had a p value < 0.05 | |
npk_aov %>% filter(p.value <= 0.05) |
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