juliangehring

# Download ICGC public release in a semi-automated manner
#
# Usage: ./download_icgc.sh
#
# Be sure to check the original link to contain all summary files
#   https://dcc.icgc.org/releases/release_23/Summary
# and list all files you want from the cohorts in contents().
#
# There may be different contents in the project folders. Check a couple, e.g.:
#   https://dcc.icgc.org/releases/release_23/Projects/CLLE-ES