konrad

#!/bin/sh
#
# Increases the speed of given mp3 files.
# 
# Published by Konrad Förstner CC0 (Creative Commons Zero)
# No Rights Reserved
# http://creativecommons.org/publicdomain/zero/1.0/
#
# To the extent possible under law, Konrad Förstner has waived all
# copyright and related or neighboring rights to this work. This

konrad

#!/usr/bin/env python
"""
FUNCTION: Converts a CSV (tab delimited) file to an Excel xlsx file.

Copyright (c) 2016, Konrad Foerstner <konrad@foerstner.org>

Permission to use, copy, modify, and/or distribute this software for
any purpose with or without fee is hereby granted, provided that the
above copyright notice and this permission notice appear in all
copies.

konrad

#!/usr/bin/env bash

#
# Script to run within the NixOS install image.
# 


set -o errexit

readonly SWAP_SIZE_IN_GB=1

konrad

#!/bin/env bash
#
# Copyright 2020 Konrad Förstner
#
# Permission to use, copy, modify, and/or distribute this software for
# any purpose with or without fee is hereby granted, provided that the
# above copyright notice and this permission notice appear in all
# copies.
#
# THE SOFTWARE IS PROVIDED "AS IS" AND THE AUTHOR DISCLAIMS ALL

konrad

#!/bin/bash                                                                                                                                                                                                                                                                                                                                                                                 

# Small script to combine some photos, cut a mp3 file into two pieces,                                                                                                                                                                                                                                                                                                                      
# fade in and out and merge everything. Rather specific so needs to be                                                                                                                                                                                               

konrad

#!/usr/bin/env bash

# Returns a BibTeX (www.bibtex.org) entry for one or more given DOIs
# (https://www.doi.org/).
#
# Call it like this:
#
# $ doi2bibtex.sh 10.1093/bioinformatics/btu533
#
# Can also be used for several DOIs at once:

konrad

Keybase proof

I hereby claim:

• I am konrad on github.
• I am konradfoerstner (https://keybase.io/konradfoerstner) on keybase.
• I have a public key whose fingerprint is 5801 2301 E981 C65D E0DB C0A1 41E6 AF4E DF9D B3D3

To claim this, I am signing this object:

konrad

import argparse
from Bio import SeqIO

parser = argparse.ArgumentParser(
    description="Split a multi entry fasta file into several files "
    "with one entry")
parser.add_argument("input_file")
parser.add_argument("output_prefix")
args = parser.parse_args()

konrad

FROM ubuntu:16.04

RUN apt-get update && apt-get dist-upgrade -y
RUN apt-get install -y curl wget git ruby python3 sra-toolkit snakemake libssl-dev libcurl4-openssl-dev libxml2-dev

WORKDIR /root
RUN wget https://github.com/pachterlab/kallisto/releases/download/v0.43.0/kallisto_linux-v0.43.0.tar.gz && \
    tar xzf kallisto_linux-v0.43.0.tar.gz && \
    mv kallisto_linux-v0.43.0/kallisto /usr/bin/ && \
    rm -rf kallisto_linux-v0.43.0 kallisto_linux-v0.43.0.tar.gz

konrad

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