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pip-based rpy2 installation errors
------------------------------------------------------------
/usr/local/bin/pip run on Mon Feb 28 16:53:05 2011
Downloading/unpacking rpy2
Running setup.py egg_info for package rpy2
running egg_info
writing pip-egg-info/rpy2.egg-info/PKG-INFO
writing top-level names to pip-egg-info/rpy2.egg-info/top_level.txt
writing dependency_links to pip-egg-info/rpy2.egg-info/dependency_links.txt
warning: manifest_maker: standard file '-c' not found
Traceback (most recent call last):
File "<string>", line 14, in <module>
File "/usr/local/var/pip/build/rpy2/setup.py", line 372, in <module>
[os.path.join('doc', 'source', 'rpy2_logo.png')])]
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "<string>", line 12, in replacement_run
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/egg_info.py", line 254, in find_sources
mm.run()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/egg_info.py", line 308, in run
self.add_defaults()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/egg_info.py", line 332, in add_defaults
sdist.add_defaults(self)
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/sdist.py", line 191, in add_defaults
build_ext = self.get_finalized_command('build_ext')
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/cmd.py", line 312, in get_finalized_command
cmd_obj.ensure_finalized()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/cmd.py", line 109, in ensure_finalized
self.finalize_options()
File "/usr/local/var/pip/build/rpy2/setup.py", line 111, in finalize_options
config += get_rconfig(r_home, about)
File "/usr/local/var/pip/build/rpy2/setup.py", line 264, in get_rconfig
rc = RConfig.from_string(rconfig)
File "/usr/local/var/pip/build/rpy2/setup.py", line 252, in from_string
+ '\nin string\n' + string)
ValueError: Invalid substring
in string
Complete output from command python setup.py egg_info:
running egg_info
writing pip-egg-info/rpy2.egg-info/PKG-INFO
writing top-level names to pip-egg-info/rpy2.egg-info/top_level.txt
writing dependency_links to pip-egg-info/rpy2.egg-info/dependency_links.txt
warning: manifest_maker: standard file '-c' not found
Traceback (most recent call last):
File "<string>", line 14, in <module>
File "/usr/local/var/pip/build/rpy2/setup.py", line 372, in <module>
[os.path.join('doc', 'source', 'rpy2_logo.png')])]
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/core.py", line 152, in setup
dist.run_commands()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/dist.py", line 953, in run_commands
self.run_command(cmd)
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/dist.py", line 972, in run_command
cmd_obj.run()
File "<string>", line 12, in replacement_run
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/egg_info.py", line 254, in find_sources
mm.run()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/egg_info.py", line 308, in run
self.add_defaults()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/egg_info.py", line 332, in add_defaults
sdist.add_defaults(self)
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/distribute-0.6.14-py2.7.egg/setuptools/command/sdist.py", line 191, in add_defaults
build_ext = self.get_finalized_command('build_ext')
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/cmd.py", line 312, in get_finalized_command
cmd_obj.ensure_finalized()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/distutils/cmd.py", line 109, in ensure_finalized
self.finalize_options()
File "/usr/local/var/pip/build/rpy2/setup.py", line 111, in finalize_options
config += get_rconfig(r_home, about)
File "/usr/local/var/pip/build/rpy2/setup.py", line 264, in get_rconfig
rc = RConfig.from_string(rconfig)
File "/usr/local/var/pip/build/rpy2/setup.py", line 252, in from_string
+ '\nin string\n' + string)
ValueError: Invalid substring
in string
----------------------------------------
Command python setup.py egg_info failed with error code 1
Exception information:
Traceback (most recent call last):
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/pip-0.8.2-py2.7.egg/pip/basecommand.py", line 130, in main
self.run(options, args)
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/pip-0.8.2-py2.7.egg/pip/commands/install.py", line 223, in run
requirement_set.prepare_files(finder, force_root_egg_info=self.bundle, bundle=self.bundle)
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/pip-0.8.2-py2.7.egg/pip/req.py", line 941, in prepare_files
req_to_install.run_egg_info()
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/pip-0.8.2-py2.7.egg/pip/req.py", line 219, in run_egg_info
command_desc='python setup.py egg_info')
File "/usr/local/Cellar/python/2.7.1/lib/python2.7/site-packages/pip-0.8.2-py2.7.egg/pip/__init__.py", line 249, in call_subprocess
% (command_desc, proc.returncode))
InstallationError: Command python setup.py egg_info failed with error code 1
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