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| javascript:(function(){ cb = function(){ create_spritz();}; var script=document.createElement('SCRIPT');script.src='https://gist.githubusercontent.com/lmmx/9852222/raw/1ab1740b53621481cea0b6bd80aa20fe34a7b095/Twitter+checker.js?callback=cb?callback=cb'; script.onload=cb; document.body.appendChild(script);})(); |
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| var titleList = []; | |
| var paras = document.getElementsByTagName('p'); | |
| for (i=0;i<paras.length;i++) { | |
| var thisPara = document.getElementsByTagName("p")[i].textContent; | |
| var title = paras[i].textContent.match(/\d{4}.*?[\)]\.\s(.*?)\./); | |
| if (title !== null) { | |
| titleList.push(title[1]); // output is the 1st element of each array (input text = 0th) | |
| } else { | |
| title = paras[i].textContent.match(/\d{4}.*?[\)]\.?\s?(.*?)\./); | |
| titleList.push(title[1]); |
lmmx
/ JournalAbbrev.js
Last active
August 29, 2015 13:59
lmmx
/ Downloadable soundcloud files.js
Last active
August 29, 2015 13:59
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| sounds = document.getElementsByClassName('soundList__item') | |
| for (i=sounds.length-1;i>=0;i--) { | |
| if (sounds[i].innerHTML.match("Download") === null) { | |
| sounds[i].remove() | |
| } | |
| } |
lmmx
/ PubChem link maker.js
Last active
August 29, 2015 14:00
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| // mytable = tsv for PubChem ID KEGG ID Compound name | |
| rows = mytable.split('\n'); | |
| newrows = []; | |
| var prefix;var PCid;var KEGGid;var cpdName;var newrow; | |
| for (i=0;i<rows.length;i++) { | |
| prefix = '<a href="https://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid='; | |
| PCid = rows[i].split('\t')[0]; | |
| KEGGid = rows[i].split('\t')[2]; | |
| cpdName = rows[i].split('\t')[4]; |
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| clade: Mammal | |
| genome: Human | |
| assembly: Feb. 2009 (GRCh37/hg19) | |
| group: All Tracks | |
| track: | |
| 1000G Ph1 Accsbl | |
| 1000G Ph1 Vars | |
| 5% Lowest S | |
| AceView Genes | |
| Affy Exon Array |
lmmx
/ UCSC Table browser tracks.tsv
Created
April 21, 2014 20:24
We can make this file beautiful and searchable if this error is corrected: It looks like row 2 should actually have 2 columns, instead of 1. in line 1.
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| tgpPhase1Accessibility 1000G Ph1 Accsbl | |
| tgpPhase1 1000G Ph1 Vars | |
| ntSssTop5p 5% Lowest S | |
| acembly AceView Genes | |
| affyExonArray Affy Exon Array | |
lmmx
/ altmetrics badge generator.js
Created
May 3, 2014 04:37
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| for (l=0;l<doilist.length;l++){ | |
| newBadge = document.createElement('div'); | |
| if (l=0 && document.querySelector('div.post').offsetLeft > 300) {lr='left';} | |
| else {lr='right';} | |
| newBadge.setAttribute('data-badge-popover',lr); | |
| newBadge.setAttribute('data-badge-type','medium-donut'); | |
| newBadge.setAttribute('data-doi',doilist[l]); | |
| newBadge.setAttribute('data-hide-no-mentions','true'); | |
| newBadge.className = "altmetric-embed"; | |
| document.getElementById('altmetBox').appendChild(newBadge); |
lmmx
/ badgestylesheet.css
Last active
August 29, 2015 14:00
Customised Altmetrics badges, using Javascript to scrape DOI's from within blog post links and produce Altmetrics links out to other content on the same papers.
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| .noshow, *:hover .noshow { | |
| fill: transparent !important; | |
| } | |
| #altmetBox { | |
| text-align: center; | |
| } | |
| #altmetBox > div.altmetric-embed { | |
| width: 276px; |
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| xmlin = prompt(); // view-source:biochemistri.es/sitemap1.xml | |
| parser = new DOMParser(); | |
| xmlDoc=parser.parseFromString(xmlin,"text/xml"); | |
| xmlDoc.querySelectorAll('loc')[0].remove(); | |
| posts = xmlDoc.querySelectorAll('loc'); | |
| postlist = []; | |
| for (i=0;i<posts.length;i++) {postlist.push(posts[i].innerHTML)}; | |
| copy(postlist.join('\t')); // Chronological list of all posts as .tsv |