Amanda Cole mandyRae

## bioinfo.py
import data
#sequence = 'cgauggccuaaguuaaagcauccaagcguagauaauagugga'

'''
Functions defined here:

convertDNAtoRNA(sequence)
countNucleotides(sequence)
getLength(sequence)
sequenceIsValid(sequence)

## data.py
'''
Data file for bioinformatics research project

All of the following are genes were parsed for this project.
All are copied from NCBI's Nucleotide Database. Links are provided.
'''

'''GENES FROM CHROMOSOME 10 USED TO FIND CG CONTENT'''

#length 3618, http://www.ncbi.nlm.nih.gov/nuccore/XM_011539816.1

## seven_segment_display_update.py
'''
Large Seven-Segment Display
Python Code for controlling display with a Raspberry Pi's GPIO

Written by Amanda on electrothoughts.wordpress.com, Aug 25, 2015
Modify this code to your heart's content!

This code contains function definitions. To make your display work,
it's recommended that you run the code in the Python shell IDE as root, and execute
functions from there, for example enter the following in a terminal:

## relaylight.ino
/*

Using an Arduino with a Power Relay

Parts used:
--ultrasonic sensor
--desk lamp
--Arduino Uno
--120v relay

## pi.py
import time
j = 0
pi = 0
plusminus = True
start_time = time.time()

while True:
    if j%2 == 1:
        if plusminus == True:
            pi += (1/j)

## tictac.py
'''
Tic Tac Toe -- Raspberry Pi GPIO -- v0.0
Amanda on Electrothoughts -- March 2016

--arcade game
--four-way keypad
--3x3 LED grid
--sound FX
--decent computer AI
--uses software PWM

## sonar.ino
//This sketch demonstrates how to interface with ultrasonic sensors using the Arduino and NewPing library

#include <NewPing.h>

int TRIGGER = 12;
int ECHO = 11;

//Declare a sonar object specifying the trigger and echo pins
NewPing sonar(TRIGGER, ECHO);

## musicalbuzzer.py
'''
Order of the Raspberry -- Amanda, Josiah, and Xavier
Group Project -- Raspberry Pi 2015-2016

Melodies and Piezo Buzzers
See below for more details on the code.

Please use this code for whatever you want!! It can be improved in a lot of ways,
and can be used for many different circuit projects!
'''

## probability_dice_sim.py
'''
Experimental Probability Dice Simulator

This program serves to demonstrate how experimental probability gives
way to theoretical probability as the number of trials increases, using rolls
of a perfect, standard, cube-shaped die. In effect, it demonstrates that the
probability of rolling any number on a perfect die is:

lim x = 1/6 = 0.1666...
x -> infty

## arduino_mouse_with_joystick.ino
/*
 * Analog Joystick Mouse Emulator with Arduino Micro
 *
 * This code turns a joystick into a computer mouse.
 *
 * Written by Amanda on Electrothoughts Jan 2016, with help from:
 *   - https://www.arduino.cc/en/Tutorial/JoystickMouseControl
 *   - book Exploring Arduino by Jeremy Blum: https://github.com/sciguy14/Exploring-Arduino/blob/master/Chapter%2006/mouse/mouse.ino
 *
 * For build instructions and background info visit www.electrothoughts.wordpress.com/2016/01/18/mouse-emulation-with-an-analog-joystick-and-arduino/
	import data
	#sequence = 'cgauggccuaaguuaaagcauccaagcguagauaauagugga'

	'''
	Functions defined here:

	convertDNAtoRNA(sequence)
	countNucleotides(sequence)
	getLength(sequence)
	sequenceIsValid(sequence)
	'''
	Data file for bioinformatics research project

	All of the following are genes were parsed for this project.
	All are copied from NCBI's Nucleotide Database. Links are provided.
	'''

	'''GENES FROM CHROMOSOME 10 USED TO FIND CG CONTENT'''

	#length 3618, http://www.ncbi.nlm.nih.gov/nuccore/XM_011539816.1
	'''
	Large Seven-Segment Display
	Python Code for controlling display with a Raspberry Pi's GPIO

	Written by Amanda on electrothoughts.wordpress.com, Aug 25, 2015
	Modify this code to your heart's content!

	This code contains function definitions. To make your display work,
	it's recommended that you run the code in the Python shell IDE as root, and execute
	functions from there, for example enter the following in a terminal:
	/*

	Using an Arduino with a Power Relay

	Parts used:
	--ultrasonic sensor
	--desk lamp
	--Arduino Uno
	--120v relay
	import time
	j = 0
	pi = 0
	plusminus = True
	start_time = time.time()

	while True:
	if j%2 == 1:
	if plusminus == True:
	pi += (1/j)
	'''
	Tic Tac Toe -- Raspberry Pi GPIO -- v0.0
	Amanda on Electrothoughts -- March 2016

	--arcade game
	--four-way keypad
	--3x3 LED grid
	--sound FX
	--decent computer AI
	--uses software PWM
	//This sketch demonstrates how to interface with ultrasonic sensors using the Arduino and NewPing library

	#include <NewPing.h>

	int TRIGGER = 12;
	int ECHO = 11;

	//Declare a sonar object specifying the trigger and echo pins
	NewPing sonar(TRIGGER, ECHO);
	'''
	Order of the Raspberry -- Amanda, Josiah, and Xavier
	Group Project -- Raspberry Pi 2015-2016

	Melodies and Piezo Buzzers
	See below for more details on the code.

	Please use this code for whatever you want!! It can be improved in a lot of ways,
	and can be used for many different circuit projects!
	'''
	'''
	Experimental Probability Dice Simulator

	This program serves to demonstrate how experimental probability gives
	way to theoretical probability as the number of trials increases, using rolls
	of a perfect, standard, cube-shaped die. In effect, it demonstrates that the
	probability of rolling any number on a perfect die is:

	lim x = 1/6 = 0.1666...
	x -> infty
	/*
	* Analog Joystick Mouse Emulator with Arduino Micro
	*
	* This code turns a joystick into a computer mouse.
	*
	* Written by Amanda on Electrothoughts Jan 2016, with help from:
	* - https://www.arduino.cc/en/Tutorial/JoystickMouseControl
	* - book Exploring Arduino by Jeremy Blum: https://github.com/sciguy14/Exploring-Arduino/blob/master/Chapter%2006/mouse/mouse.ino
	*
	* For build instructions and background info visit www.electrothoughts.wordpress.com/2016/01/18/mouse-emulation-with-an-analog-joystick-and-arduino/