Michele Mattioni mattions

## myapp.py
from gunicorn.app.base import Application, Config

class GUnicornFlaskApplication(Application):

    def __init__(self, app):
        self.usage, self.callable, self.prog, self.app = None, None, None, app

    def run(self, **options):
        self.cfg = Config()
        [self.cfg.set(key, value) for key, value in options.items()]

## Exploring different distribution.ipynb

      
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                mattions
                / Exploring different distribution.ipynb
            
            
              Created
              July 30, 2013 14:32
            
              
                Shapes and definition of some statistical PDFs, handy to do some modelling.
You can see the rendered version on nbviewer here: http://nbviewer.ipython.org/urls/gist.github.com/mattions/6113437/raw/c5468ea930d6960225d83e112d7f3d00d9c13398/Exploring+different+distribution.ipynb
              
          
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## python_r_NGS
{
 "metadata": {
  "name": "reading stuff in"
 },
 "nbformat": 3,
 "nbformat_minor": 0,
 "worksheets": [
  {
   "cells": [
    {

## NGS_notes.ipnb
{
 "metadata": {
  "name": "NGS"
 },
 "nbformat": 3,
 "nbformat_minor": 0,
 "worksheets": [
  {
   "cells": [
    {

## page_checker.py
import requests
import time
from datetime import datetime
from bs4 import BeautifulSoup

URL="http://www.plosone.org/search/advanced?pageSize=12&sort=&queryField=author&queryTerm=&unformattedQuery=author%3A%22Michele+Mattioni%22&journalOpt=some&filterJournals=PLoSONE&subjectCatOpt=all&filterArticleTypeOpt=all"
SENTENCE_WHICH_SHOULD_CHANGE="There were no results"

article_out = False

## postmkvirtualenv
#!/bin/bash
# This hook is run after a new virtualenv is activated.
# ~/.virtualenvs/postmkvirtualenv

libs=( PyQt4 sip.so )

python_version=python$(python -c "import sys; print (str(sys.version_info[0])+'.'+str(sys.version_info[1]))")
var=( $(which -a $python_version) )

get_python_lib_cmd="from distutils.sysconfig import get_python_lib; print (get_python_lib())"

## sin_and_cos.py
import numpy as np
import pylab as pl
from numpy import sin, cos

x = np.linspace(-10, 10, 500)
pl.plot(x, sin(x), label="sin")
pl.plot(x, cos(x), label="cos")
pl.plot(x, sin(x) + cos(x), label="sin + cos")
pl.plot(x, pow(sin(x), 2), label = "sin^2")

## matplotlibrc
### MATPLOTLIBRC FORMAT

# This is a sample matplotlib configuration file - you can find a copy
# of it on your system in
# site-packages/matplotlib/mpl-data/matplotlibrc.  If you edit it
# there, please note that it will be overwritten in your next install.
# If you want to keep a permanent local copy that will not be
# overwritten, place it in HOME/.matplotlib/matplotlibrc (unix/linux
# like systems) and C:\Documents and Settings\yourname\.matplotlib
# (win32 systems).

## widgets.py
import re
import django.forms
from django.forms.widgets import Widget, Select
from django.utils.safestring import mark_safe
from django.forms.widgets import MultiWidget
from django.forms.extras.widgets import SelectDateWidget

__all__ = ('SelectTimeWidget', 'SplitSelectDateTimeWidget')


## gist:4194475
{
 "metadata": {
  "name": "italian_demographic_distribution"
 },
 "nbformat": 2,
 "worksheets": [
  {
   "cells": [
    {
     "cell_type": "code",
	from gunicorn.app.base import Application, Config

	class GUnicornFlaskApplication(Application):

	def __init__(self, app):
	self.usage, self.callable, self.prog, self.app = None, None, None, app

	def run(self, **options):
	self.cfg = Config()
	[self.cfg.set(key, value) for key, value in options.items()]
	{
	"metadata": {
	"name": "reading stuff in"
	},
	"nbformat": 3,
	"nbformat_minor": 0,
	"worksheets": [
	{
	"cells": [
	{
	{
	"metadata": {
	"name": "NGS"
	},
	"nbformat": 3,
	"nbformat_minor": 0,
	"worksheets": [
	{
	"cells": [
	{
	import requests
	import time
	from datetime import datetime
	from bs4 import BeautifulSoup

	URL="http://www.plosone.org/search/advanced?pageSize=12&sort=&queryField=author&queryTerm=&unformattedQuery=author%3A%22Michele+Mattioni%22&journalOpt=some&filterJournals=PLoSONE&subjectCatOpt=all&filterArticleTypeOpt=all"
	SENTENCE_WHICH_SHOULD_CHANGE="There were no results"

	article_out = False
	#!/bin/bash
	# This hook is run after a new virtualenv is activated.
	# ~/.virtualenvs/postmkvirtualenv

	libs=( PyQt4 sip.so )

	python_version=python$(python -c "import sys; print (str(sys.version_info[0])+'.'+str(sys.version_info[1]))")
	var=( $(which -a $python_version) )

	get_python_lib_cmd="from distutils.sysconfig import get_python_lib; print (get_python_lib())"
	import numpy as np
	import pylab as pl
	from numpy import sin, cos

	x = np.linspace(-10, 10, 500)
	pl.plot(x, sin(x), label="sin")
	pl.plot(x, cos(x), label="cos")
	pl.plot(x, sin(x) + cos(x), label="sin + cos")
	pl.plot(x, pow(sin(x), 2), label = "sin^2")
	### MATPLOTLIBRC FORMAT

	# This is a sample matplotlib configuration file - you can find a copy
	# of it on your system in
	# site-packages/matplotlib/mpl-data/matplotlibrc. If you edit it
	# there, please note that it will be overwritten in your next install.
	# If you want to keep a permanent local copy that will not be
	# overwritten, place it in HOME/.matplotlib/matplotlibrc (unix/linux
	# like systems) and C:\Documents and Settings\yourname\.matplotlib
	# (win32 systems).
	import re
	import django.forms
	from django.forms.widgets import Widget, Select
	from django.utils.safestring import mark_safe
	from django.forms.widgets import MultiWidget
	from django.forms.extras.widgets import SelectDateWidget

	__all__ = ('SelectTimeWidget', 'SplitSelectDateTimeWidget')
	{
	"metadata": {
	"name": "italian_demographic_distribution"
	},
	"nbformat": 2,
	"worksheets": [
	{
	"cells": [
	{
	"cell_type": "code",