Conference info: https://bioc2018.bioconductor.org/
My first Bioconductor meeting, and I'm not a BioC or R expert so these notes are probably going to be naïve!
Michael Hoffman michaelmhoffman
michaelmhoffman
/ strace.all.txt
Created
March 10, 2023 02:48
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| 2251 21:44:30.236005 execve("/snap/bin/emacs", ["emacs", "--batch", "--quick"], 0x7ffc09b44230 /* 14 vars */) = 0 | |
| 2251 21:44:30.236805 brk(NULL) = 0x560153de3000 | |
| 2251 21:44:30.237154 arch_prctl(0x3001 /* ARCH_??? */, 0x7ffe73afab20) = -1 EINVAL (Invalid argument) | |
| 2251 21:44:30.237518 mmap(NULL, 8192, PROT_READ|PROT_WRITE, MAP_PRIVATE|MAP_ANONYMOUS, -1, 0) = 0x7f63bc25c000 | |
| 2251 21:44:30.237803 access("/etc/ld.so.preload", R_OK) = -1 ENOENT (No such file or directory) | |
| 2251 21:44:30.238052 openat(AT_FDCWD, "/etc/ld.so.cache", O_RDONLY|O_CLOEXEC) = 3 | |
| 2251 21:44:30.238286 newfstatat(3, "", {st_mode=S_IFREG|0644, st_size=14311, ...}, AT_EMPTY_PATH) = 0 | |
| 2251 21:44:30.238533 mmap(NULL, 14311, PROT_READ, MAP_PRIVATE, 3, 0) = 0x7f63bc258000 | |
| 2251 21:44:30.238729 close(3) = 0 | |
| 2251 21:44:30.238941 openat(AT_FDCWD, "/lib/x86_64-linux-gnu/libc.so.6", O_RDONLY|O_CLOEXEC) = 3 |
michaelmhoffman
/ config-ispell-hunspell-windows-workaround.el
Created
June 10, 2020 02:15
Workaround for Emacs for unimplemented part of hunspell win32 listdicpath()
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| (require 'ispell) | |
| (when (string-equal (getenv "LANG") "ENU") | |
| (setenv "LANG" "en_US")) | |
| ;; XXX: hunspell doesn't work because Emacs wants to figure out where its | |
| ;; directories are, and for win32 hunspell 1.7.0, `hunspell -D` *never* runs listdicpath() | |
| ;; https://github.com/hunspell/hunspell/issues/669 | |
| ;; to correct, copied this bit from ispell-find-hunspell-dictionaries and |
michaelmhoffman
/ auto-insert-python.el
Last active
August 25, 2020 14:47
Template for Python scripts
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| (defun new-copyright () | |
| "Generate new copyright string." | |
| (format-time-string "Copyright %Y Michael M. Hoffman <michael.hoffman@utoronto.ca>")) | |
| (define-auto-insert 'python-mode | |
| `( | |
| "Description: " | |
| "#!/usr/bin/env python3.6" \n | |
| "\"\"\"" (setq basename (buffer-file-basename)) ": " str \n | |
| "\"\"\"" \n \n |
michaelmhoffman
/ bioc2018.md
Last active
July 26, 2018 15:03
— forked from jxtx/bioc2018.md
#bioC 2018 Conference Notes
michaelmhoffman
/ README.md
Created
December 29, 2015 22:58
— forked from lindenb/README.md
sort KML for @michaelhoffman https://twitter.com/michaelhoffman/status/681959184573661185 sort each Placemark inside each Folder on key=styleUrl
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| set.seed(2015-08-17) | |
| sum(as.integer(lapply(seq(1000), function(i) summary(lm(y ~ x, list(y = runif(5), x = runif(5))))$r.squared > 0.8)))/1000 |