mutterer

abs(n)
acos(n)
Array.concat(array1, array2)
Array.copy(array)
Array.deleteValue(array, value)
Array.deleteIndex(array, index)
Array.fill(array, value)
Array.filter(array, filter)
Array.findMaxima(array, tolerance)
Array.findMinima(array, tolerance)

mutterer

macro "Better Wand Tool - C000T0f10BT7f10WTff10T" {
   if (!isOpen("ROI Manager")) run("ROI Manager...");
   smoothness= call('ij.Prefs.get','bwt.selectSmoothness',3);
   getCursorLoc(x, y, z, flags);
   id=getImageID;
   setBatchMode(1);
   run("Select None");
   run("Duplicate...","title=a");
   run("Gaussian Blur...", "radius="+smoothness);
   id2=getImageID;

mutterer

macro "MultiRoiMove Tool - C00cT0f16M" {
  if (RoiManager.selected<2) exit(); 
  indexes=split(call("ij.plugin.frame.RoiManager.getIndexesAsString"));
  roiManager("Combine");
  getCursorLoc(x, y, z, modifiers);
  Roi.getBounds(x0, y0, width, height);
  while(modifiers&16>0) {
    getCursorLoc(x1, y1, z, modifiers);
    Roi.move(x0+x1-x, y0+y1-y);
  }

mutterer

setBatchMode(1);
t=getTitle();
getBoundingRect(x, y, width, height);
run("Select None");
run("Duplicate..." , "title=ori duplicate");
makeRectangle(x, y, width, height);
run("RGB Stack");
run("32-bit");
id=getImageID;
run("Duplicate..." , "title=temp duplicate");

mutterer

// ImageJ macro to read 'timestamps' and 'events' from CZI files.

path = File.openDialog("Select CZI File");
s = File.openAsRawString(path, File.length(path));

o = indexOf(s,"CZTIMS");
o=o+0xcc;
n = parseInt(read32bAt(o));
timestamps = newArray(n);

mutterer

sourcedir=getDirectory("select source directory with lsm files");
destdir=getDirectory("select or create destination directory");
list = getFileList(sourcedir);

Dialog.create("New LSM Batch color converter options");
	Dialog.addChoice("Export format  ", newArray("Tiff", "Jpeg"));
	Dialog.addCheckbox("Output merged channels image(s) ", true);
	Dialog.addCheckbox("Process all time points ", false);
	Dialog.addCheckbox("Process all slices ", false);
	Dialog.addCheckbox("Convert to 8-bit ", false);

mutterer

// This tool draws a line, and overlays its profile and some infos
// 2023-01-22 fixed profile origin by moving Overlay.moveTo after setColor.

 macro "Line and Profile Tool -C00bL1de0L1ee1" {
        getCursorLoc(x, y, z, flags);
        xstart = x; ystart = y;
        x2=x; y2=y;        
        while (true) {
            getCursorLoc(x, y, z, flags);
            if (flags&16==0) {

mutterer

var r =6;

macro "2D Gaussian Fit Tool - C00cT0f16GTbf16f" {
   setBatchMode(1);
   getCursorLoc(x, y, z, f);
   while (f&16>0) {
   Overlay.clear;
   getCursorLoc(x, y, z, f);

   makeRectangle(x-r,y-r,2*r,2*r);

mutterer

macro "inches_mm_toggle Action Tool - C000T0608iT3608nT8f08mTef08mL0dd0" {
    getVoxelSize(width, height, depth, unit);
    if (unit.startsWith("inch")) {
        width=width*25.4;
        height=height*25.4;
        depth=depth*25.4;
        unit = "mm";
    } else if (unit.startsWith("mm")) {
        width=width/25.4;
        height=height/25.4;

mutterer

macro "Adjust Overlay Transparency Tool - C00cT0f20A" {
   getCursorLoc(x, y, z, flags);
   px=x;
   while (flags&16>0) {
     getCursorLoc(x, y, z, flags);
     if (x!=px) {
       Overlay.activateSelectionAndWait(Overlay.size-1);
       run("Properties... ","opacity="+100*x/getWidth+" transparent");
       Overlay.removeSelection(Overlay.size-1);
       Overlay.addSelection;