Skip to content

Instantly share code, notes, and snippets.

@mw55309

mw55309/esearch

Created March 4, 2022 09:58
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save mw55309/5b70e82f982973d24281d5003eb720f7 to your computer and use it in GitHub Desktop.
Save mw55309/5b70e82f982973d24281d5003eb720f7 to your computer and use it in GitHub Desktop.
Download ZIP
Raw
esearch
esearch -db bioproject -query "ENTREZ QUERY HERE" | efetch -format docsum | xtract -pattern DocumentSummary -element Project_Acc Project_Title Project_Target_Material Project_MethodType Project_Description Sequencing_Status
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment