1. Pre-process central nervous system (CNS) RNA-seq reads
2. Map RNA-seq reads to reference genome
4. Evigene pipeline for meta-assembly
5a. Characterize gene expression using meta-assembly
5d. Compare all three assemblies
6. Aggregate & annotate predicted protein-coding sequences
7a. Drosophila CNS transcriptome analyses (for comparison)
7b. Zebrafish CNS transcriptome analyses (for comparison)
7c. Mouse CNS transcriptome analyses (for comparison)
7d. Xenopus tropicalis CNS transcriptome analyses (for comparison)
7e. C. elegans CNS transcriptome analyses (for comparison)
7f. KOG comparisons of all CNS transcriptoms