Created
November 29, 2012 08:34
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Brew template for ORCID publication listings
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| <!DOCTYPE html> | |
| <!-- paulirish.com/2008/conditional-stylesheets-vs-css-hacks-answer-neither/ --> | |
| <!--[if lt IE 7]> <html class="no-js lt-ie9 lt-ie8 lt-ie7" lang="en"> <![endif]--> | |
| <!--[if IE 7]> <html class="no-js lt-ie9 lt-ie8" lang="en"> <![endif]--> | |
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| <!--[if gt IE 8]><!--> <html class="no-js" lang="en"> <!--<![endif]--> | |
| <head> | |
| <meta charset="utf-8" /> | |
| <!-- Set the viewport width to device width for mobile --> | |
| <meta name="viewport" content="width=device-width" /> | |
| <title>RORCID demo</title> | |
| <!-- Included CSS Files (Uncompressed) --> | |
| <!-- | |
| <link rel="stylesheet" href="stylesheets/foundation.css"> | |
| --> | |
| <!-- Included CSS Files (Compressed) --> | |
| <link rel="stylesheet" href="stylesheets/foundation.min.css"> | |
| <link rel="stylesheet" href="stylesheets/app.css"> | |
| <script src="javascripts/modernizr.foundation.js"></script> | |
| <!-- IE Fix for HTML5 Tags --> | |
| <!--[if lt IE 9]> | |
| <script src="http://html5shiv.googlecode.com/svn/trunk/html5.js"></script> | |
| <![endif]--> | |
| </head> | |
| <body> | |
| <div class="row"> | |
| <div class="twelve columns"> | |
| <h2>Publications</h2> | |
| <h6>Martin Fenner <a href="https://orcid.org/0000-0003-1419-2405">ORCID:0000-0003-1419-2405</a></h6> | |
| <hr /> | |
| </div> | |
| </div> | |
| <div class="row"> | |
| <div class="eight columns"> | |
| <% | |
| library(httr) | |
| library(XML) | |
| library(RJSONIO) | |
| tt <- fromJSON("http://sciencecard.org/api/v3/users/0000-0003-1419-2405?info=summary") | |
| doi <- c() | |
| for (i in 1 : length(tt$user$articles)) { | |
| doi.tmp <- tt$user$articles[[i]]$article$doi | |
| date.tmp <- tt$user$articles[[i]]$article$publication_date | |
| doi <- c(doi,doi.tmp) | |
| } | |
| my.cites <- data.frame() | |
| for (i in doi) { | |
| csl.tmp <- content(GET(paste("http://dx.doi.org/",i, sep=""), add_headers(Accept = "text/x-bibliography;style=harvard3"))) | |
| doi.xml <- GET(paste("http://dx.doi.org/",i, sep=""), | |
| add_headers(Accept = "Accept: application/vnd.crossref.unixref+xml;q=1, application/rdf+xml;q=0.5")) | |
| doc <- xmlTreeParse(doi.xml, useInternal = T) | |
| year.tmp <- as.numeric(xpathSApply (doc,"//publication_date//year",xmlValue) [1]) | |
| tmp <- data.frame(csl.tmp,year.tmp,i) | |
| my.cites <- rbind(my.cites,tmp) | |
| } | |
| my.cites <- my.cites[unique(my.cites$i),] | |
| my.cites <- my.cites[rev(order(my.cites$year.tmp)),] | |
| cites <- c() | |
| for (i in 1:nrow(my.cites)) { | |
| cite <- paste('<p>',as.character(my.cites$csl.tmp)[i],'</br>DOI: <a href="http://dx.doi.org/',as.character(my.cites$i)[i],'">',as.character(my.cites$i)[i],'</a></p>',sep="") | |
| cat(cite) | |
| } | |
| %> | |
| </div> | |
| <div class="three columns"> | |
| <h6>About</h6> | |
| <p>The aim of this webpage is to demonstrate a better showcase of publications claimed as part of ORCID profiles.</p> | |
| <p> The underlying R code queries <a href="http://sciencecard.org/">Sciencecard</a> for a given ORCID and returns the DOI for each publication. It, then, requests the CSL representation and metadata provided by <a href="http://www.crosscite.org/cn/">CrossCite</a>.</p> | |
| <h6>Built with</h6> | |
| <p><a href="http://www.r-project.org/"><img src="http://www.r-project.org/Rlogo.jpg"></a></p><p> Packages used: <a href="http://cran.r-project.org/web/packages/XML/index.html">XML</a>, <a href="http://cran.r-project.org/web/packages/RJSONIO/index.html">RJSONIO</a>, <a href="http://cran.r-project.org/web/packages/httr/">httr</a> and <a href="http://cran.r-project.org/web/packages/brew/index.html">Brew</a>. Styled with <a href="http://foundation.zurb.com/">Foundation</a>.</p> | |
| </div> | |
| </div> | |
| <!-- Included JS Files (Uncompressed) --> | |
| <!-- | |
| <script src="javascripts/modernizr.foundation.js"></script> | |
| <script src="javascripts/jquery.js"></script> | |
| <script src="javascripts/jquery.foundation.mediaQueryToggle.js"></script> | |
| <script src="javascripts/jquery.foundation.reveal.js"></script> | |
| <script src="javascripts/jquery.foundation.orbit.js"></script> | |
| <script src="javascripts/jquery.foundation.navigation.js"></script> | |
| <script src="javascripts/jquery.foundation.buttons.js"></script> | |
| <script src="javascripts/jquery.foundation.tabs.js"></script> | |
| <script src="javascripts/jquery.foundation.forms.js"></script> | |
| <script src="javascripts/jquery.foundation.tooltips.js"></script> | |
| <script src="javascripts/jquery.foundation.accordion.js"></script> | |
| <script src="javascripts/jquery.placeholder.js"></script> | |
| <script src="javascripts/jquery.foundation.alerts.js"></script> | |
| --> | |
| <!-- Included JS Files (Compressed) --> | |
| <script src="javascripts/foundation.min.js"></script> | |
| <!-- Initialize JS Plugins --> | |
| <script src="javascripts/app.js"></script> | |
| </body> | |
| </html> |
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