Skip to content

Instantly share code, notes, and snippets.

View nobias's full-sized avatar

Tobias Nöbauer nobias

  • The Rockefeller University
  • New York City
View GitHub Profile
@nobias
nobias / qsub.man
Created October 22, 2014 16:07
man page for qsub (pbs_version = PBSPro_12.2.1.140292)
qsub(1B) PBS Professional qsub(1B)
NAME
qsub - submit PBS job
SYNOPSIS
@nobias
nobias / extract_z_slices_from_sequence_into_one_tiff.py
Created October 29, 2014 10:38
ImageJ/Fiji plugin: Extracts frames from a multi-frame TIFF file and saves them into a new multi-frame TIFF
import os
import os.path
import glob
from loci.plugins.util import BFVirtualStack
from loci.formats import ImageReader
from ij import ImagePlus, ImageStack
from ij import IJ
from ij.io import DirectoryChooser
from ij.gui import GenericDialog