packages.scm

(define-module (wabisabi packages)
	       #:use-module ((guix licenses) #:prefix license:)
	       #:use-module (gnu packages)
	       #:use-module (gnu packages check)
	       #:use-module (gnu packages django)
	       #:use-module (gnu packages python)
	       #:use-module (gnu packages python-build)
	       #:use-module (gnu packages python-check)
	       #:use-module (gnu packages python-science)
	       #:use-module (gnu packages python-xyz)
	       #:use-module (gnu packages sphinx)
	       #:use-module (guix build-system python)
	       #:use-module (guix packages)
	       #:use-module (guix download)
	       #:use-module (guix git-download))

;; guix pathpy seems to not install properly, the library doesn't actually end up in site packages
(define-public python-path
  (package
   (name "python-path")
   (version "15.1.2")
   (source
    (origin
     (method url-fetch)
     (uri (pypi-uri "path" version))
     (sha256
      (base32
       "1dv07yqwbap6dxi0pma37vfaprd6j630zymwr0hvy9b8v3prlqmv"))))
    (outputs '("out"))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-appdirs" ,python-appdirs)
       ("python-importlib-metadata" ,python-importlib-metadata)))
    (native-inputs
     `(("python-setuptools-scm" ,python-setuptools-scm)
       ("python-wheel" ,python-setuptools-scm)
       ("python-toml" ,python-toml)
       ("python-setuptools" ,python-setuptools-scm)
       ("python-pytest" ,python-pytest)
       ("python-pytest-runner" ,python-pytest-runner)
       ("python-jaraco-packaging" ,python-jaraco-packaging)))
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             ;; The import time test aborts if an import takes longer than
             ;; 100ms.  It may very well take a little longer than that.
             (invoke "pytest" "-v" "-k" "not test_import_time"))))))
    (home-page "https://github.com/jaraco/path.py")
    (synopsis "Python module wrapper for built-in os.path")
    (description
     "@code{path.py} implements path objects as first-class entities, allowing
common operations on files to be invoked on those path objects directly.")
    (license license:expat)))

;; use updated 'path' dep instead of 'path.py'
(define-public python-pytest-shutil-fixed
  (package
    (name "python-pytest-shutil-fixed")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-shutil" version))
       (sha256
        (base32
         "0q8j0ayzmnvlraml6i977ybdq4xi096djhf30n2m1rvnvrhm45nq"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'patch-tests
           (lambda _
             (mkdir "/tmp/bin")
             (substitute* "tests/integration/test_cmdline_integration.py"
               (("dirname = '/bin'")
                "dirname = '/tmp/bin'")
               (("bindir = os.path.realpath\\('/bin'\\)")
                "bindir = os.path.realpath('/tmp/bin')"))
             (substitute* "setup.py"
                          (("path.py")
                           "path"))
             #t)))))
    (propagated-inputs
     `(("python-contextlib2" ,python-contextlib2)
       ("python-execnet" ,python-execnet)
       ("python-path" ,python-path)
       ("python-termcolor" ,python-termcolor)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Assorted shell and environment tools for py.test")
    (description
     "This package provides assorted shell and environment tools for the
py.test testing framework.")
    (license license:expat)))

(define-public python-pyscaffold
  (package
    (name "python-pyscaffold")
    (version "3.3.1")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "PyScaffold" version))
        (sha256
          (base32
            "0sba9wcwfxm4gsjg0ssp85i9q4420cj4xdd8qbzvc683wrv2nfhw"))))
    (build-system python-build-system)
    (propagated-inputs
      `(("python-setuptools" ,python-setuptools)))
    (native-inputs
      `(("python-cookiecutter" ,python-cookiecutter)
        ("python-django" ,python-django)
        ("python-flake8" ,python-flake8)
        ("python-pytest" ,python-pytest)
        ("python-pytest-cov" ,python-pytest-cov)
        ("python-pytest-fixture-config"
         ,python-pytest-fixture-config)
        ("python-pytest-shutil-fixed" ,python-pytest-shutil-fixed)
        ("python-pytest-virtualenv"
         ,python-pytest-virtualenv)
        ("python-pytest-xdist" ,python-pytest-xdist)
        ("python-sphinx" ,python-sphinx)))
    (home-page
      "https://github.com/pyscaffold/pyscaffold/")
    (synopsis
      "Template tool for putting up the scaffold of a Python project")
    (description
      "Template tool for putting up the scaffold of a Python project")
    (license license:expat)))

(define-public python-salib
  (package
    (name "python-salib")
    (version "1.3.12")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "SALib" version))
        (sha256
          (base32
            "18hy1sqjc360lpal6qw2piqwddk1q564m74x4n27jandhrj9k34i"))))
    (build-system python-build-system)
    (propagated-inputs
      `(("python-matplotlib" ,python-matplotlib)
        ("python-numpy" ,python-numpy)
        ("python-pandas" ,python-pandas)
        ("python-pandas" ,python-pyscaffold)
        ("python-scipy" ,python-scipy)))
    (native-inputs
      `(("python-pytest" ,python-pytest)
        ("python-pytest-cov" ,python-pytest-cov)))
    (home-page "http://salib.github.io/SALib/")
    (synopsis
      "Tools for sensitivity analysis. Contains Sobol, Morris, and FAST methods")
    (description
      "Tools for sensitivity analysis. Contains Sobol, Morris, and FAST methods")
    (license license:expat)))

(define-public python-agentpy
  (package
    (name "python-agentpy")
    (version "0.0.6")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "agentpy" version))
        (sha256
          (base32
            "1dv2vpjbv1d7vyjfi0pdiqvplfjz9l969k0qi7s6cba2mfkydkvm"))))
    (build-system python-build-system)
    (propagated-inputs
      `(("python-ipython" ,python-ipython)
        ("python-ipywidgets" ,python-ipywidgets)
        ("python-matplotlib" ,python-matplotlib)
        ("python-networkx" ,python-networkx)
        ("python-numpy" ,python-numpy)
        ("python-pandas" ,python-pandas)
        ("python-salib" ,python-salib)
        ("python-scipy" ,python-scipy)))
    (home-page "https://agentpy.readthedocs.io/")
    (synopsis "Agent-based modeling in Python")
    (description "Agent-based modeling in Python")
    (license license:bsd-3)))

(define-public python-bitcoin-coin-selection
  (let ((commit "96be26f0930debfec75ee6749c8fb5f9fc008312")
        (revision "0"))
    (package
     (name "python-bitcoin-coin-selection")
     (version (git-version "0.0.0" revision commit))
     (source
      (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/Kevingislason/bitcoin_coin_selection.git")
             (commit commit)))
       (sha256
        (base32
         "1cwvs3pnbqkr2ig3wqzsklbncqd82kwf3zjag5i5sji9cl2hcpp8"))
       ;; (patches (list (string-append (dirname (current-filename)) "/patches/bitcoin-coin-selection-setuppy.patch"))))) ;; breaks manifest.scm usage (gexp related?)
       (patches (list "/home/user/WabiSabi/Amount_Organization/guix/lib/wabisabi/patches/bitcoin-coin-selection-setuppy.patch"))))
     (build-system python-build-system)
     (native-inputs
      `(("python-pytest" ,python-pytest)))
     (home-page "https://github.com/Kevingislason/bitcoin_coin_selection")
     (synopsis "Port of Bitcoin core coin selection logic to Python")
     (description "Port of Bitcoin core coin selection logic to Python, prioritizing fidelity to the original and convenience. Classes / functions were named and organized per the original C++ code as far as was practicable. Most comments are copied.")
     (license license:expat))))