pfurio

About

Instructions to obtain WireGuard details of your NordVPN account. These can be used to setup a WireGuard tunnel on your router to NordVPN.

Source: https://forum.gl-inet.com/t/configure-wireguard-client-to-connect-to-nordvpn-servers/10422/27

Prerequisites

If you have any linux machine, use that or install a vm if you don't have one.

Get their official linux app installed. Make sure you have wireguard installed too. And set the used technology to Nordlynx by running nordvpn set technology nordlynx

pfurio

#!/usr/bin/env python

from pymongo import MongoClient
from bson import ObjectId
import datetime
import argparse

parser = argparse.ArgumentParser(description='Get the number of times each user have logged in during a period of time.')
parser.add_argument('host', metavar='host', help='Mongo host and port. Example: localhost:27017.')
# parser.add_argument('database', metavar='database', help='Mongo database name. Example: opencga_catalog.')

pfurio

// 1. Load the function from https://gist.github.com/pfurio/f7cd90af08e0073699f0beeeef1958ba

// 2. Load all the scripts present in the gist in the CATALOG database

pfurio

// Extracted from https://stackoverflow.com/questions/3066586/get-string-in-yyyymmdd-format-from-js-date-object
Date.prototype.opencgaDate = function() {
  // We will get the current day minus 7 days
  this.setDate(this.getDate() - 7);
  var mm = this.getMonth() + 1; // getMonth() is zero-based
  var dd = this.getDate();

  return [this.getFullYear(),
          (mm>9 ? '' : '0') + mm,
          (dd>9 ? '' : '0') + dd,

pfurio

// Use migration script https://gist.github.com/pfurio/f7cd90af08e0073699f0beeeef1958ba

/*
Migrate NUMERIC variables to DOUBLE https://github.com/opencb/opencga/issues/545
*/

// This function receives an array of variables (not variableSet),
// and will modify NUMERIC variables to DOUBLE recursively
function modifyNumeric(variables) {
    var modified = false;

pfurio

migrateCollection("metadata", {}, {config: 1, acl: 1}, function (bulk, doc) {
    var id = doc._id;
 
    var permissions = ["VIEW_FILE_HEADERS", "VIEW_FILE_CONTENTS", "VIEW_FILES", "WRITE_FILES", "VIEW_JOBS", "WRITE_JOBS"];
    doc.acl[0].permissions = permissions;
    doc.config.acl[0].permissions = permissions;
 
    bulk.find({_id: id}).update({$set: {"acl": doc.acl, "config.acl": doc.config.acl}});
});
 

pfurio

function migrateCollection(collection, query, projection, migrateFunc) {
    var bulk = db.getCollection(collection).initializeOrderedBulkOp();
    var count = 0;
    var bulkSize = 500;
    db.getCollection(collection).find(query,projection).forEach(function(doc) {
        migrateFunc(bulk, doc);
        if ( bulk.nUpdateOps + bulk.nInsertOps + bulk.nRemoveOps >= bulkSize ) {
            count += bulk.nUpdateOps + bulk.nInsertOps + bulk.nRemoveOps;
            print("Execute bulk! " + count);
            bulk.execute();

pfurio

# -*- coding: utf-8 -*-

# Author: Pedro Furió Tarí
# Data: 06/05/2013
#
# This script will take a sorted and indexed bam file and return different text files with the counts
# Useful when doing a trimming step for pair-end. After trimming, we have to make sure that we have the pairs correctly paired

import getopt, sys, os.path
import pysam