Created
May 18, 2017 12:15
-
-
Save rleegates/d99050d89a06c9c6c117935935a421f4 to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
function *{T1<:AbstractDataBlock,T2<:AbstractDataBlock}(A::SparseMatrixCSC{T1,Int}, B::SparseMatrixCSC{T2,Int}) | |
# modified from julia base (put into license!!!!) | |
mA, nA = size(A) | |
mB, nB = size(B) | |
nA==mB || throw(DimensionMismatch()) | |
colptrA = A.colptr; rowvalA = A.rowval; nzvalA = A.nzval | |
colptrB = B.colptr; rowvalB = B.rowval; nzvalB = B.nzval | |
# TODO: Need better estimation of result space | |
nnzC = min(mA*nB, length(nzvalA) + length(nzvalB)) | |
colptrC = Array{Int}(nB+1) | |
rowvalC = Array{Int}(nnzC) | |
T3 = promote_type(T1,T2) | |
nzvalC = Array{T3}(nnzC) | |
@inbounds begin | |
ip = 1 | |
xb = zeros(Int, mA) | |
x = Vector{Queue{T3}}(mA) | |
for i in 1:nB | |
if ip + mA - 1 > nnzC | |
resize!(rowvalC, nnzC + max(nnzC,mA)) | |
resize!(nzvalC, nnzC + max(nnzC,mA)) | |
nnzC = length(nzvalC) | |
end | |
colptrC[i] = ip | |
for jp in colptrB[i]:(colptrB[i+1] - 1) | |
nzB = nzvalB[jp] | |
j = rowvalB[jp] | |
for kp in colptrA[j]:(colptrA[j+1] - 1) | |
nzC = nzvalA[kp]*nzB | |
k = rowvalA[kp] | |
if xb[k] != i | |
rowvalC[ip] = k | |
ip += 1 | |
xb[k] = i | |
x[k] = nzC | |
else | |
add!(x[k], nzC) | |
end | |
end | |
end | |
for vp in colptrC[i]:(ip - 1) | |
nzvalC[vp] = reduce(x[rowvalC[vp]]) | |
end | |
end | |
colptrC[nB+1] = ip | |
end | |
deleteat!(rowvalC, colptrC[end]:length(rowvalC)) | |
deleteat!(nzvalC, colptrC[end]:length(nzvalC)) | |
# The Gustavson algorithm does not guarantee the product to have sorted row indices. | |
Cunsorted = SparseMatrixCSC(mA, nB, colptrC, rowvalC, nzvalC) | |
C = sortSparseMatrixCSC!(Cunsorted) | |
return C | |
end |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment