Skip to content

Instantly share code, notes, and snippets.

@tcgriffith

tcgriffith/gist:fe5c9d6cd442e3e7f4e74a5e5a50d915

Last active October 16, 2019 07:52
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save tcgriffith/fe5c9d6cd442e3e7f4e74a5e5a50d915 to your computer and use it in GitHub Desktop.
Save tcgriffith/fe5c9d6cd442e3e7f4e74a5e5a50d915 to your computer and use it in GitHub Desktop.
Download ZIP
Raw
gistfile1.txt
>4rzd_A.pdb.mapping.bak -- ss predicted by dssr
GAGCAACUUAGGAUUUUAGGCUCCCCGGCGUGUCUCGAACCAUGCCGGGCCAAACCCAUAGGGCUGGCGGUCCCUGUGCGGUCAAAAUUCAUCCGCCGGAG
<<<<......((((((...>>>>(((((((((........)))))))))....((((((((((........))))))).)))..))))))...........
>4RZD_A SPOT-RNA output
GAGCAACUUAGGAUUUUAGGCUCCCCGGCGUGUCUCGAACCAUGCCGGGCCAAACCCAUAGGGCUGGCGGUCCCUGUGCGGUCAAAAUUCAUCCGCCGGAG
<<<<.......(((((...>>>>(((((((((........)))))))))....((((((((((........))))))).)))..)))))............
>4RZD:A|PDBID|CHAIN|SEQUENCE
GAGCAACUUAGGAUUUUAGGCUCCCCGGCGUGUCUCGAACCAUGCCGGGCCAAACCCAUAGGGCUGGCGGUCCCUGUGCGGUCAAAAUUCAUCCGCCGGAG
((((...............)))).((((((((........))))))))((((..((....))..)))).....(((.((((...........))))))).. (-35.20)
>3q3z_V.pdb.mapping.bak -- ss predicted by dssr
GCGCGGAAACAAUGAUGAAUGGGUUUAAAUUGGGCACUUGACUCAUUUUGAGUUAGUAGUGCAACCGACCGUGCU
((((((..((......(((((((((.....{<<<<<<<.)))))))))...))....>>>>>}.>>..)))))).
>3Q3Z_V SPOT-RNA output
GCGCGGAAACAAUGAUGAAUGGGUUUAAAUUGGGCACUUGACUCAUUUUGAGUUAGUAGUGCAACCGACCGUGCU
((((((.(((....(((((((((((......<<<<<<<.))))))))))).)))...>>>>>..>>..)))))).
>3Q3Z:V|PDBID|CHAIN|SEQUENCE
GCGCGGAAACAAUGAUGAAUGGGUUUAAAUUGGGCACUUGACUCAUUUUGAGUUAGUAGUGCAACCGACCGUGCU
((((((((((.((.....))..))))...((((((((((((((((...)))))))..)))))..)))))))))). (-22.80)
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment