Skip to content

Instantly share code, notes, and snippets.

@tomMoral
Created January 19, 2021 13:31
Show Gist options
  • Star 0 You must be signed in to star a gist
  • Fork 0 You must be signed in to fork a gist
  • Save tomMoral/d5fa252327d66091daa799fc081ebd04 to your computer and use it in GitHub Desktop.
Save tomMoral/d5fa252327d66091daa799fc081ebd04 to your computer and use it in GitHub Desktop.
Simulate Marcenko-Pastur Law
import numpy as np
import matplotlib.pyplot as plt
from matplotlib import rc
# activate latex text rendering
rc('text', usetex=True)
if __name__ == "__main__":
sig = 1
n_hist = 3
max_iter = 5000
list_m = np.logspace(2, 3, n_hist, dtype=int)
vals, e_min, e_max = {}, {}, {}
for alpha in [0.25, 1, 4]:
vals[alpha], e_min[alpha], e_max[alpha] = {}, {}, {}
# Simulate distributions
for m in list_m:
n = int(m / alpha)
vals[alpha][m], e_min[alpha][m], e_max[alpha][m] = [], [], []
for i in range(max_iter):
print(f'iteration m={m}, n={n}: {i / max_iter:6.1%}\r',
end='', flush=True)
X = sig * np.random.randn(m, n)
Y = X.dot(X.T) / n
e, _ = np.linalg.eigh(Y)
vals[alpha][m].extend(e)
e_min[alpha][m].append(min(e[abs(e) > 1e-10]))
e_max[alpha][m].append(max(e))
print(f'iteration m={m}, n={n}: {"done":6}')
# Setup plot
fig = plt.figure()
spec = plt.GridSpec(
ncols=2, nrows=3, height_ratios=(0.1, 0.45, 0.45),
figure=fig
)
ax_full = fig.add_subplot(spec[1, :])
ax_min = fig.add_subplot(spec[2, 0])
ax_max = fig.add_subplot(spec[2, 1])
# Marchenko-Pastur constants and density
l_min = (sig * (1 - np.sqrt(alpha))) ** 2
l_max = (sig * (1 + np.sqrt(alpha))) ** 2
t = np.linspace(l_min, l_max, 1000)
nu = np.sqrt((l_max - t) * (t - l_min)) / (2 * np.pi * alpha * t)
# Plot histograms
bins = 100
bins_min, bins_max = bins, bins
for c, m in enumerate(list_m):
ax_full.hist(
vals[alpha][m], bins=bins, color=f'C{c}',
alpha=0.5, density=True
)
_, bins_min, _ = ax_min.hist(
np.array(e_min[alpha][m]) - l_min, bins=bins_min,
alpha=0.5, density=True
)
_, bins_max, _ = ax_max.hist(
np.array(e_max[alpha][m]) - l_max, bins=bins_max,
alpha=0.5, density=True
)
# Plot density function
ax_full.plot(t, nu, color='k')
ax_full.set_title(r"Eigenvalues $\lambda$")
if alpha == 4:
ax_full.set_ylim(0, .3)
# Plot theoretical values
for ax, title in [(ax_min, r'$\lambda_{min} - \lambda_-$'),
(ax_max, r'$\lambda_{max} - \lambda_+$')]:
ylim = np.array(ax.get_ylim())
ax.vlines(0, *ylim, color='k', ls='--')
ax.set_ylim(ylim)
ax.set_title(title)
ax_legend = fig.add_subplot(spec[0, :])
leg = ax_legend.legend(
[plt.Rectangle((0, 0), 1, 1, color=f'C{c}', alpha=0.5)
for c in range(len(list_m))],
[f'{n}' for n in list_m], loc='center',
bbox_to_anchor=(0, 0, 1, 1), ncol=len(list_m),
title=r'\textbf{\underline{Sample size $n$}}'
)
leg._legend_box.align = "left"
ax_legend.set_axis_off()
plt.tight_layout()
plt.savefig(f'marchenko_pastur_alpha={alpha}.pdf', dpi=300)
plt.show()
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment