Pkg3 issue manifest and project files

Manifest.toml

[[AltDistributions]]
deps = ["ArgCheck", "Distributions", "DocStringExtensions", "ForwardDiff", "LinearAlgebra", "Parameters", "Random", "SpecialFunctions", "StatsFuns"]
path = "/home/tamas/code/julia/AltDistributions"
uuid = "875e7ca2-ab9d-5828-93ae-a098eac53262"
version = "0.1.0"

[[ArgCheck]]
deps = ["Random", "Test"]
git-tree-sha1 = "9e3bff61bc46d3420d903b53ad07f85325fddc28"
uuid = "dce04be8-c92d-5529-be00-80e4d2c0e197"
version = "1.0.0"

[[Arpack]]
deps = ["BinaryProvider", "Libdl", "LinearAlgebra", "Random", "SparseArrays", "Test"]
git-tree-sha1 = "1ce1ce9984683f0b6a587d5bdbc688ecb480096f"
uuid = "7d9fca2a-8960-54d3-9f78-7d1dccf2cb97"
version = "0.3.0"

[[Base64]]
uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"

[[BenchmarkTools]]
deps = ["JSON", "Printf", "Statistics", "Test"]
git-tree-sha1 = "e686f1754227e4748259f400839b83a1e8773e02"
uuid = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf"
version = "0.4.1"

[[BinDeps]]
deps = ["Compat", "Libdl", "SHA", "URIParser"]
git-tree-sha1 = "12093ca6cdd0ee547c39b1870e0c9c3f154d9ca9"
uuid = "9e28174c-4ba2-5203-b857-d8d62c4213ee"
version = "0.8.10"

[[BinaryProvider]]
deps = ["Libdl", "Pkg", "SHA", "Test"]
git-tree-sha1 = "055eb2690182ebc31087859c3dd8598371d3ef9e"
uuid = "b99e7846-7c00-51b0-8f62-c81ae34c0232"
version = "0.5.3"

[[BufferedStreams]]
deps = ["Compat", "Test"]
git-tree-sha1 = "5d55b9486590fdda5905c275bb21ce1f0754020f"
uuid = "e1450e63-4bb3-523b-b2a4-4ffa8c0fd77d"
version = "1.0.0"

[[Cairo]]
deps = ["BinDeps", "Colors", "Compat", "Graphics", "Homebrew", "Libdl", "WinRPM"]
git-tree-sha1 = "a427098d5aa2808504d94b8ed9fc5740ceaf71d0"
uuid = "159f3aea-2a34-519c-b102-8c37f9878175"
version = "0.5.6"

[[Calculus]]
deps = ["Compat"]
git-tree-sha1 = "f60954495a7afcee4136f78d1d60350abd37a409"
uuid = "49dc2e85-a5d0-5ad3-a950-438e2897f1b9"
version = "0.4.1"

[[CategoricalArrays]]
deps = ["Compat", "Future", "Missings", "Printf", "Reexport", "Requires"]
git-tree-sha1 = "64651a0315fc342e7e35d03d67b2da920937c9be"
uuid = "324d7699-5711-5eae-9e2f-1d82baa6b597"
version = "0.5.0"

[[CodecZlib]]
deps = ["BinaryProvider", "Libdl", "Test", "TranscodingStreams"]
git-tree-sha1 = "e3df104c84dfc108f0ca203fd7f5bbdc98641ae9"
uuid = "944b1d66-785c-5afd-91f1-9de20f533193"
version = "0.5.1"

[[ColorTypes]]
deps = ["FixedPointNumbers", "Random", "Test"]
git-tree-sha1 = "f73b0e10f2a5756de7019818a41654686da06b09"
uuid = "3da002f7-5984-5a60-b8a6-cbb66c0b333f"
version = "0.7.5"

[[Colors]]
deps = ["ColorTypes", "FixedPointNumbers", "InteractiveUtils", "Printf", "Reexport", "Test"]
git-tree-sha1 = "9f0a0210450acb91c730b730a994f8eef1d3d543"
uuid = "5ae59095-9a9b-59fe-a467-6f913c188581"
version = "0.9.5"

[[CommonSubexpressions]]
deps = ["Test"]
git-tree-sha1 = "efdaf19ab11c7889334ca247ff4c9f7c322817b0"
uuid = "bbf7d656-a473-5ed7-a52c-81e309532950"
version = "0.2.0"

[[Compat]]
deps = ["Base64", "Dates", "DelimitedFiles", "Distributed", "InteractiveUtils", "LibGit2", "Libdl", "LinearAlgebra", "Markdown", "Mmap", "Pkg", "Printf", "REPL", "Random", "Serialization", "SharedArrays", "Sockets", "SparseArrays", "Statistics", "Test", "UUIDs", "Unicode"]
git-tree-sha1 = "ec61a16eed883ad0cfa002d7489b3ce6d039bb9a"
uuid = "34da2185-b29b-5c13-b0c7-acf172513d20"
version = "1.4.0"

[[Crayons]]
deps = ["Test"]
git-tree-sha1 = "3017c662a988bcb8a3f43306a793617c6524d476"
uuid = "a8cc5b0e-0ffa-5ad4-8c14-923d3ee1735f"
version = "1.0.0"

[[DataFrames]]
deps = ["CategoricalArrays", "CodecZlib", "Compat", "DataStreams", "Dates", "InteractiveUtils", "IteratorInterfaceExtensions", "LinearAlgebra", "Missings", "Printf", "Random", "Reexport", "SortingAlgorithms", "Statistics", "StatsBase", "TableTraits", "Tables", "Test", "TranscodingStreams", "Unicode", "WeakRefStrings"]
git-tree-sha1 = "ad34fefb72b18a8dd5c17fab9089d11111b61935"
uuid = "a93c6f00-e57d-5684-b7b6-d8193f3e46c0"
version = "0.14.1"

[[DataStreams]]
deps = ["Dates", "Missings", "Test", "WeakRefStrings"]
git-tree-sha1 = "69c72a1beb4fc79490c361635664e13c8e4a9548"
uuid = "9a8bc11e-79be-5b39-94d7-1ccc349a1a85"
version = "0.4.1"

[[DataStructures]]
deps = ["InteractiveUtils", "OrderedCollections", "Random", "Serialization", "Test"]
git-tree-sha1 = "8fc6e166e24fda04b2b648d4260cdad241788c54"
uuid = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
version = "0.14.0"

[[Dates]]
deps = ["Printf"]
uuid = "ade2ca70-3891-5945-98fb-dc099432e06a"

[[DefaultApplication]]
deps = ["Test"]
git-tree-sha1 = "a51d16b075dc52e22cde13b4a6e0ba4ba86649ee"
uuid = "3f0dd361-4fe0-5fc6-8523-80b14ec94d85"
version = "0.1.3"

[[DelimitedFiles]]
deps = ["Mmap"]
uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"

[[DiffEqDiffTools]]
deps = ["LinearAlgebra", "Test"]
git-tree-sha1 = "67700c9fc82033ec68a145bc650f6b9debdf9103"
uuid = "01453d9d-ee7c-5054-8395-0335cb756afa"
version = "0.7.1"

[[DiffResults]]
deps = ["Compat", "StaticArrays"]
git-tree-sha1 = "db8acf46717b13d6c48deb7a12007c7f85a70cf7"
uuid = "163ba53b-c6d8-5494-b064-1a9d43ac40c5"
version = "0.0.3"

[[DiffRules]]
deps = ["Random", "Test"]
git-tree-sha1 = "c49ec69428ffea0c1d1bbdc63d1a70f5df5860ad"
uuid = "b552c78f-8df3-52c6-915a-8e097449b14b"
version = "0.0.7"

[[Distributed]]
deps = ["LinearAlgebra", "Random", "Serialization", "Sockets"]
uuid = "8ba89e20-285c-5b6f-9357-94700520ee1b"

[[Distributions]]
deps = ["Distributed", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsBase", "StatsFuns", "Test"]
git-tree-sha1 = "c24e9b6500c037673f0241a2783472b8c3d080c7"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.16.4"

[[DocStringExtensions]]
deps = ["LibGit2", "Markdown", "Pkg", "Test"]
git-tree-sha1 = "1df01539a1c952cef21f2d2d1c092c2bcf0177d7"
uuid = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
version = "0.6.0"

[[DynamicHMC]]
deps = ["ArgCheck", "DataStructures", "DocStringExtensions", "LinearAlgebra", "LogDensityProblems", "Parameters", "Random", "Statistics", "StatsFuns", "TransformVariables"]
git-tree-sha1 = "10315592b6d6c2f5b0762b337c17898544b79902"
repo-rev = "master"
repo-url = "https://github.com/tpapp/DynamicHMC.jl.git"
uuid = "bbc10e6e-7c05-544b-b16e-64fede858acb"
version = "1.0.1+"

[[EponymTuples]]
path = "/home/tamas/code/julia/EponymTuples"
uuid = "28d0dd7e-ae99-11e8-1574-ad8a33f43547"
version = "0.2.2"

[[FileIO]]
deps = ["Pkg", "Random", "Test"]
git-tree-sha1 = "1a114d08094e7267ba8d4d684f930d5a722184de"
uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.0.4"

[[FixedPointNumbers]]
deps = ["Test"]
git-tree-sha1 = "b8045033701c3b10bf2324d7203404be7aef88ba"
uuid = "53c48c17-4a7d-5ca2-90c5-79b7896eea93"
version = "0.5.3"

[[ForwardDiff]]
deps = ["CommonSubexpressions", "DiffResults", "DiffRules", "InteractiveUtils", "LinearAlgebra", "NaNMath", "Random", "SparseArrays", "SpecialFunctions", "StaticArrays", "Test"]
git-tree-sha1 = "b91250044374764e7c29af59a774c4b8d6100b6e"
uuid = "f6369f11-7733-5829-9624-2563aa707210"
version = "0.10.1"

[[FunctionWrappers]]
deps = ["Compat"]
git-tree-sha1 = "49bf793ebd37db5adaa7ac1eae96c2c97ec86db5"
uuid = "069b7b12-0de2-55c6-9aab-29f3d0a68a2e"
version = "1.0.0"

[[Future]]
deps = ["Random"]
uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"

[[Graphics]]
deps = ["Colors", "Compat", "NaNMath"]
git-tree-sha1 = "e3ead4211073d4117a0d2ef7d1efc5c8092c8412"
uuid = "a2bd30eb-e257-5431-a919-1863eab51364"
version = "0.4.0"

[[Gtk]]
deps = ["BinDeps", "Cairo", "Compat", "Graphics", "Homebrew", "Libdl", "Reexport", "Serialization", "Test", "WinRPM"]
git-tree-sha1 = "261bfcf4910db53990f289c1338aa8eb3b89fb44"
uuid = "4c0ca9eb-093a-5379-98c5-f87ac0bbbf44"
version = "0.16.4"

[[GtkReactive]]
deps = ["Cairo", "Colors", "Dates", "FixedPointNumbers", "Graphics", "Gtk", "IntervalSets", "Reactive", "Reexport", "RoundingIntegers", "Test"]
git-tree-sha1 = "b906033713697f214b95b3e9bd51db398e794420"
uuid = "27996c0f-39cd-5cc1-a27a-05f136f946b6"
version = "0.5.2"

[[HTTPClient]]
deps = ["Compat", "LibCURL"]
git-tree-sha1 = "161d5776ae8e585ac0b8c20fb81f17ab755b3671"
uuid = "0862f596-cf2d-50af-8ef4-f2be67dfa83f"
version = "0.2.1"

[[Homebrew]]
deps = ["BinDeps", "InteractiveUtils", "JSON", "Libdl", "Test", "Unicode"]
git-tree-sha1 = "5582ec74f735cf8d12e562a2e65c47f34063bd51"
uuid = "d9be37ee-ecc9-5288-90f1-b9ca67657a75"
version = "0.7.0"

[[InteractiveUtils]]
deps = ["Markdown"]
uuid = "b77e0a4c-d291-57a0-90e8-8db25a27a240"

[[IntervalSets]]
deps = ["Compat"]
git-tree-sha1 = "9dc556002f23740de13946e8c2e41798e09a9249"
uuid = "8197267c-284f-5f27-9208-e0e47529a953"
version = "0.3.1"

[[IteratorInterfaceExtensions]]
deps = ["Test"]
git-tree-sha1 = "5484e5ede2a4137b9643f4d646e8e7b87b794415"
uuid = "82899510-4779-5014-852e-03e436cf321d"
version = "0.1.1"

[[JLD2]]
deps = ["CodecZlib", "DataStructures", "FileIO", "LinearAlgebra", "Mmap", "Printf", "Random", "Test"]
git-tree-sha1 = "3ba90ff93e1d5b9b2103588051c2d349fae54dac"
uuid = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
version = "0.1.2"

[[JSON]]
deps = ["Dates", "Distributed", "Mmap", "Sockets", "Test", "Unicode"]
git-tree-sha1 = "1f7a25b53ec67f5e9422f1f551ee216503f4a0fa"
uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
version = "0.20.0"

[[LibCURL]]
deps = ["BinaryProvider", "Compat", "Libdl", "Printf"]
git-tree-sha1 = "6339c87cb76923a3cf947fcd213cbc364355c9c9"
uuid = "b27032c2-a3e7-50c8-80cd-2d36dbcbfd21"
version = "0.4.1"

[[LibExpat]]
deps = ["Compat"]
git-tree-sha1 = "fde352ec13479e2f90e57939da2440fb78c5e388"
uuid = "522f3ed2-3f36-55e3-b6df-e94fee9b0c07"
version = "0.5.0"

[[LibGit2]]
uuid = "76f85450-5226-5b5a-8eaa-529ad045b433"

[[Libdl]]
uuid = "8f399da3-3557-5675-b5ff-fb832c97cbdb"

[[Libz]]
deps = ["BufferedStreams", "Random", "Test"]
git-tree-sha1 = "d405194ffc0293c3519d4f7251ce51baac9cc871"
uuid = "2ec943e9-cfe8-584d-b93d-64dcb6d567b7"
version = "1.0.0"

[[LineSearches]]
deps = ["LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "Printf", "Test"]
git-tree-sha1 = "54eb90e8dbe745d617c78dee1d6ae95c7f6f5779"
uuid = "d3d80556-e9d4-5f37-9878-2ab0fcc64255"
version = "7.0.1"

[[LinearAlgebra]]
deps = ["Libdl"]
uuid = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"

[[LogDensityProblems]]
deps = ["ArgCheck", "BenchmarkTools", "DiffResults", "DocStringExtensions", "Parameters", "Random", "Requires", "TransformVariables"]
git-tree-sha1 = "ec398ebd142cfd884bd7ad47d9d9bcaac3e5bff5"
repo-rev = "master"
repo-url = "https://github.com/tpapp/LogDensityProblems.jl.git"
uuid = "6fdf6af0-433a-55f7-b3ed-c6c6e0b8df7c"
version = "0.5.1"

[[Logging]]
uuid = "56ddb016-857b-54e1-b83d-db4d58db5568"

[[MacroTools]]
deps = ["Compat"]
git-tree-sha1 = "c443e1c8d58a4e9f61b708ad0a88286c7042145b"
uuid = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
version = "0.4.4"

[[Markdown]]
deps = ["Base64"]
uuid = "d6f4376e-aef5-505a-96c1-9c027394607a"

[[Missings]]
deps = ["Dates", "InteractiveUtils", "SparseArrays", "Test"]
git-tree-sha1 = "adc26d2ee85a49c413464110d922cf21efc9d233"
uuid = "e1d29d7a-bbdc-5cf2-9ac0-f12de2c33e28"
version = "0.3.1"

[[Mmap]]
uuid = "a63ad114-7e13-5084-954f-fe012c677804"

[[NLSolversBase]]
deps = ["Calculus", "DiffEqDiffTools", "DiffResults", "Distributed", "ForwardDiff", "LinearAlgebra", "Random", "SparseArrays", "Test"]
git-tree-sha1 = "ebfb2e96970151753575b9c4d31d47e5ae8382a5"
uuid = "d41bc354-129a-5804-8e4c-c37616107c6c"
version = "7.1.1"

[[NaNMath]]
deps = ["Compat"]
git-tree-sha1 = "ce3b85e484a5d4c71dd5316215069311135fa9f2"
uuid = "77ba4419-2d1f-58cd-9bb1-8ffee604a2e3"
version = "0.3.2"

[[Optim]]
deps = ["Calculus", "DiffEqDiffTools", "ForwardDiff", "LineSearches", "LinearAlgebra", "NLSolversBase", "NaNMath", "Parameters", "PositiveFactorizations", "Printf", "Random", "SparseArrays", "StatsBase", "Test"]
git-tree-sha1 = "0f2a6c6ff9db396cc7af15bb1cf057a26662ff17"
uuid = "429524aa-4258-5aef-a3af-852621145aeb"
version = "0.17.2"

[[OrderedCollections]]
deps = ["Random", "Serialization", "Test"]
git-tree-sha1 = "85619a3f3e17bb4761fe1b1fd47f0e979f964d5b"
uuid = "bac558e1-5e72-5ebc-8fee-abe8a469f55d"
version = "1.0.2"

[[PDMats]]
deps = ["Arpack", "LinearAlgebra", "SparseArrays", "SuiteSparse", "Test"]
git-tree-sha1 = "9e3e7a5c9b8cfdba8c01a1bcae38fe0144936fda"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.9.5"

[[PGFPlotsX]]
deps = ["ArgCheck", "Crayons", "DataStructures", "Dates", "DefaultApplication", "DocStringExtensions", "MacroTools", "Missings", "Parameters", "Pkg", "Requires", "StatsBase", "Test", "Unicode"]
git-tree-sha1 = "c751ee50432fa8025dd7fbf12e42c079c04c9a2f"
uuid = "8314cec4-20b6-5062-9cdb-752b83310925"
version = "0.3.3"

[[Parameters]]
deps = ["Markdown", "OrderedCollections", "REPL", "Test"]
git-tree-sha1 = "eec0fe16344cc14aa2e6251874ab30d62aff4f7c"
uuid = "d96e819e-fc66-5662-9728-84c9c7592b0a"
version = "0.10.2"

[[Pkg]]
deps = ["Dates", "LibGit2", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"

[[PositiveFactorizations]]
deps = ["LinearAlgebra", "Test"]
git-tree-sha1 = "86ae7329c4b5c266acf5c7c524a972300d991e1c"
uuid = "85a6dd25-e78a-55b7-8502-1745935b8125"
version = "0.2.1"

[[Printf]]
deps = ["Unicode"]
uuid = "de0858da-6303-5e67-8744-51eddeeeb8d7"

[[Profile]]
deps = ["Printf"]
uuid = "9abbd945-dff8-562f-b5e8-e1ebf5ef1b79"

[[ProfileView]]
deps = ["Cairo", "Colors", "FileIO", "Graphics", "Gtk", "GtkReactive", "InteractiveUtils", "IntervalSets", "Profile", "UUIDs"]
git-tree-sha1 = "5943d68015219a58bf4d949c20b89f1db558c963"
uuid = "c46f51b8-102a-5cf2-8d2c-8597cb0e0da7"
version = "0.4.0"

[[QuadGK]]
deps = ["DataStructures", "LinearAlgebra", "Test"]
git-tree-sha1 = "7e8dff9c205f36eceaf6e62a43ff851637ca45fc"
uuid = "1fd47b50-473d-5c70-9696-f719f8f3bcdc"
version = "2.0.2"

[[REPL]]
deps = ["InteractiveUtils", "Markdown", "Sockets"]
uuid = "3fa0cd96-eef1-5676-8a61-b3b8758bbffb"

[[Random]]
deps = ["Serialization"]
uuid = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"

[[Reactive]]
deps = ["DataStructures", "Distributed", "Test"]
git-tree-sha1 = "2384e3bda9dcd16750ff605fdf817e18cfdd9bae"
uuid = "a223df75-4e93-5b7c-acf9-bdd599c0f4de"
version = "0.8.2"

[[Reexport]]
deps = ["Pkg"]
git-tree-sha1 = "7b1d07f411bc8ddb7977ec7f377b97b158514fe0"
uuid = "189a3867-3050-52da-a836-e630ba90ab69"
version = "0.2.0"

[[Requires]]
deps = ["Test"]
git-tree-sha1 = "f6fbf4ba64d295e146e49e021207993b6b48c7d1"
uuid = "ae029012-a4dd-5104-9daa-d747884805df"
version = "0.5.2"

[[ReverseDiff]]
deps = ["DiffResults", "DiffRules", "ForwardDiff", "FunctionWrappers", "LinearAlgebra", "NaNMath", "Random", "SpecialFunctions", "StaticArrays", "Statistics", "Test"]
git-tree-sha1 = "d44e80d815a1a5abaf1ff1def21bb629cabaffec"
uuid = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
version = "0.3.1"

[[Rmath]]
deps = ["BinaryProvider", "Libdl", "Random", "Statistics", "Test"]
git-tree-sha1 = "9a6c758cdf73036c3239b0afbea790def1dabff9"
uuid = "79098fc4-a85e-5d69-aa6a-4863f24498fa"
version = "0.5.0"

[[RoundingIntegers]]
deps = ["Test"]
git-tree-sha1 = "293ba0ab32218b9ffd596040224228def84f8da0"
uuid = "d5f540fe-1c90-5db3-b776-2e2f362d9394"
version = "0.2.0"

[[SHA]]
uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"

[[Serialization]]
uuid = "9e88b42a-f829-5b0c-bbe9-9e923198166b"

[[SharedArrays]]
deps = ["Distributed", "Mmap", "Random", "Serialization"]
uuid = "1a1011a3-84de-559e-8e89-a11a2f7dc383"

[[Sockets]]
uuid = "6462fe0b-24de-5631-8697-dd941f90decc"

[[SortingAlgorithms]]
deps = ["DataStructures", "Random", "Test"]
git-tree-sha1 = "03f5898c9959f8115e30bc7226ada7d0df554ddd"
uuid = "a2af1166-a08f-5f64-846c-94a0d3cef48c"
version = "0.3.1"

[[SparseArrays]]
deps = ["LinearAlgebra", "Random"]
uuid = "2f01184e-e22b-5df5-ae63-d93ebab69eaf"

[[SpecialFunctions]]
deps = ["BinDeps", "BinaryProvider", "Libdl", "Test"]
git-tree-sha1 = "0b45dc2e45ed77f445617b99ff2adf0f5b0f23ea"
uuid = "276daf66-3868-5448-9aa4-cd146d93841b"
version = "0.7.2"

[[StaticArrays]]
deps = ["InteractiveUtils", "LinearAlgebra", "Random", "Statistics", "Test"]
git-tree-sha1 = "6804a209e3a3cc436c56da0d4d67789159b1b232"
repo-rev = "master"
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Project.toml

name = "Couples"
uuid = "ce5ba1d2-d6c8-11e8-3882-317d233c7d8f"
authors = ["Tamas K. Papp <tkpapp@gmail.com>"]
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