nextflow.log

May-31 05:24:56.746 [main] DEBUG nextflow.cli.Launcher - $> /home/vagrant/bin/nextflow run hello
May-31 05:24:56.813 [main] INFO  nextflow.cli.CmdRun - N E X T F L O W  ~  version 0.19.2
May-31 05:24:57.037 [main] DEBUG nextflow.scm.AssetManager - Listing projects in folder: /home/vagrant/.nextflow/assets
May-31 05:24:57.042 [main] INFO  nextflow.cli.CmdRun - Pulling nextflow-io/hello ...
May-31 05:24:57.043 [main] DEBUG nextflow.scm.RepositoryProvider - Request [credentials -:-] -> https://api.github.com/repos/nextflow-io/hello/contents/nextflow.config
May-31 05:24:58.247 [main] DEBUG nextflow.scm.RepositoryProvider - Request [credentials -:-] -> https://api.github.com/repos/nextflow-io/hello/contents/main.nf
May-31 05:24:58.797 [main] DEBUG nextflow.scm.RepositoryProvider - Request [credentials -:-] -> https://api.github.com/repos/nextflow-io/hello
May-31 05:24:58.943 [main] DEBUG nextflow.scm.AssetManager - Pulling nextflow-io/hello -- Using remote clone url: https://github.com/nextflow-io/hello.git
May-31 05:25:01.079 [main] INFO  nextflow.cli.CmdRun -  downloaded from https://github.com/nextflow-io/hello.git
May-31 05:25:01.137 [main] DEBUG nextflow.scm.AssetManager - Git config: /home/vagrant/.nextflow/assets/nextflow-io/hello/.git/config; branch: master; remote: origin; url: https://github.com/nextflow-io/hello.git
May-31 05:25:01.137 [main] INFO  nextflow.cli.CmdRun - Launching 'nextflow-io/hello' - revision: 6b9515aba6 [master]
May-31 05:25:01.521 [main] DEBUG nextflow.Session - Session uuid: 00cb89c7-24bc-4e02-b940-919539d4f1bf
May-31 05:25:01.522 [main] DEBUG nextflow.Session - Executor pool size: 2
May-31 05:25:01.558 [main] DEBUG nextflow.cli.CmdRun -
  Version: 0.19.2 build 3784
  Modified: 26-05-2016 14:28 UTC (10:28 EDT)
  System: Linux 3.10.0-327.13.1.el7.x86_64
  Runtime: Groovy 2.4.5 on Java HotSpot(TM) 64-Bit Server VM 1.8.0_91-b14
  Encoding: UTF-8 (UTF-8)
  Process: 26327@localhost.localdomain [127.0.0.1]

May-31 05:25:01.563 [main] DEBUG nextflow.Session - Script base path does not exist or is not a directory: /home/vagrant/.nextflow/assets/nextflow-io/hello/bin
May-31 05:25:01.563 [main] DEBUG nextflow.Session - Session start invoked
May-31 05:25:01.564 [main] DEBUG nextflow.processor.TaskDispatcher - Dispatcher > start
May-31 05:25:01.564 [main] DEBUG nextflow.script.ScriptRunner - > Script parsing
May-31 05:25:01.729 [main] DEBUG nextflow.script.ScriptRunner - > Launching execution
May-31 05:25:01.905 [main] DEBUG nextflow.processor.ProcessFactory - << taskConfig executor: null
May-31 05:25:01.905 [main] DEBUG nextflow.processor.ProcessFactory - >> processorType: 'local'
May-31 05:25:01.926 [main] DEBUG nextflow.executor.Executor - Initializing executor: local
May-31 05:25:01.928 [main] INFO  nextflow.executor.Executor - [warm up] executor > local
May-31 05:25:01.933 [main] DEBUG n.processor.LocalPollingMonitor - Creating local task monitor for executor 'local' > cpus: 1; memory: 3975688192; pollInterval: 100ms; dumpInterval: 5m
May-31 05:25:01.944 [main] DEBUG nextflow.processor.TaskDispatcher - Starting monitor: LocalPollingMonitor
May-31 05:25:01.945 [main] DEBUG n.processor.TaskPollingMonitor - >>> barrier register (monitor: local)
May-31 05:25:01.954 [main] DEBUG nextflow.executor.Executor - Invoke register for executor: local
May-31 05:25:02.026 [main] DEBUG nextflow.Session - >>> barrier register (process: sayHello)
May-31 05:25:02.057 [main] DEBUG n.processor.ParallelTaskProcessor - Creating operator > sayHello -- maxForks: 2
May-31 05:25:02.103 [main] DEBUG nextflow.script.ScriptRunner - > Await termination
May-31 05:25:02.103 [main] DEBUG nextflow.Session - Session await