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git bisect logs for r-source
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| git bisect start | |
| # bad: [a9c667b703491606572682cda256c29ee3373885] update | |
| git bisect bad a9c667b703491606572682cda256c29ee3373885 | |
| # good: [a1ccebfa864c46eaf1ac7e63e3255531c2eaf9e3] Updates to modernize and correct documentation. Copied from the devel version. Missed on previous merges. | |
| git bisect good a1ccebfa864c46eaf1ac7e63e3255531c2eaf9e3 | |
| # skip: [453d361c9edb0a3bbef30cd92c9ed6a8ab78172a] Avoid warning about non-existent path. | |
| git bisect skip 453d361c9edb0a3bbef30cd92c9ed6a8ab78172a | |
| # good: [42baa85c438205d2d272a91b63ad4a5270f32dd5] maintainer-mode changes | |
| git bisect good 42baa85c438205d2d272a91b63ad4a5270f32dd5 | |
| # good: [293426bff7113a642b501e9b8e08fcf97de1b8c8] "object.size" format() and print() get more options | |
| git bisect good 293426bff7113a642b501e9b8e08fcf97de1b8c8 | |
| # bad: [6686aeb528ff5567dce6dce9131da355f106e097] allow non-ASCII itle in Rd2pdf | |
| git bisect bad 6686aeb528ff5567dce6dce9131da355f106e097 | |
| # good: [75164778f7283f4e8814bd152edc1c18d9536da0] there is another bug in read.dcf in R <= 3.3.2 which this fix cannot avoid | |
| git bisect good 75164778f7283f4e8814bd152edc1c18d9536da0 | |
| # bad: [122ae80610a59cac63a2d5eca219e7d20102ac4f] avoid double <-> long double conversions on which gcc warns | |
| git bisect bad 122ae80610a59cac63a2d5eca219e7d20102ac4f | |
| # bad: [96d1df901272656483647d0003c6a861e424c4a7] + example for 'lsof' | |
| git bisect bad 96d1df901272656483647d0003c6a861e424c4a7 | |
| # good: [a60c0bfdfe320e96dad1b7f1e330d3cf5ef3903d] Adjusted documentation and examples for JIT being enabled by default. | |
| git bisect good a60c0bfdfe320e96dad1b7f1e330d3cf5ef3903d | |
| # good: [46fa9dcf24d68118eff2116205b8e53ef34b56b2] mention alternatives to glibc | |
| git bisect good 46fa9dcf24d68118eff2116205b8e53ef34b56b2 | |
| # good: [0a90d99bdc8ab9d0c4941161c5bcc1af868ae74b] tweak: R 3.3.2 adds a NL to BugReports anyway | |
| git bisect good 0a90d99bdc8ab9d0c4941161c5bcc1af868ae74b | |
| # bad: [7c950ac11202cabc25b276c2f4da82226644953d] use tryCatch() instead of try() twice | |
| git bisect bad 7c950ac11202cabc25b276c2f4da82226644953d | |
| # good: [c240a932ad62238e2371be081be781f278fc59ca] doc tweaks for package_native_routine_registration_skeleton | |
| git bisect good c240a932ad62238e2371be081be781f278fc59ca | |
| # first bad commit: [7c950ac11202cabc25b276c2f4da82226644953d] use tryCatch() instead of try() twice |
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| running ../pool-test/test-script.sh | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| loading site script './config.site' | |
| loading build-specific script './config.site' | |
| checking for pwd... /usr/bin/pwd | |
| checking whether builddir is srcdir... yes | |
| checking for working aclocal... found | |
| checking for working autoconf... found | |
| checking for working automake... found | |
| checking for working autoheader... found | |
| checking whether ln -s works... yes | |
| checking for bison... bison -y | |
| checking for ar... ar | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking for sed... /usr/bin/sed | |
| checking for which... /usr/bin/which | |
| checking for less... /usr/bin/less | |
| checking for gtar... no | |
| checking for gnutar... no | |
| checking for tar... /usr/bin/tar | |
| checking for tex... /usr/bin/tex | |
| checking for pdftex... /usr/bin/pdftex | |
| checking for pdflatex... /usr/bin/pdflatex | |
| checking for makeindex... /usr/bin/makeindex | |
| checking for texi2any... /usr/bin/texi2any | |
| checking whether texi2any version is at least 5.1... yes | |
| checking for ginstall-info... no | |
| checking for install-info... no | |
| checking for texi2dvi... /usr/bin/texi2dvi | |
| checking for kpsewhich... /usr/bin/kpsewhich | |
| checking for latex inconsolata package... found zi4.sty | |
| checking for unzip... /usr/bin/unzip | |
| checking for zip... /usr/bin/zip | |
| checking for gzip... /usr/bin/gzip | |
| checking for bzip2... /usr/bin/bzip2 | |
| checking for firefox... no | |
| checking for mozilla... no | |
| checking for galeon... no | |
| checking for opera... no | |
| checking for xdg-open... /usr/bin/xdg-open | |
| using default browser ... /usr/bin/xdg-open | |
| checking for acroread... no | |
| checking for acroread4... no | |
| checking for xdg-open... /usr/bin/xdg-open | |
| checking for notangle... false | |
| checking for realpath... /usr/bin/realpath | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking how to run the C preprocessor... gcc -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
| checking for egrep... /usr/bin/grep -E | |
| checking whether gcc needs -traditional... no | |
| checking how to run the C preprocessor... gcc -E | |
| checking for f95... f95 | |
| checking whether we are using the GNU Fortran 77 compiler... yes | |
| checking whether f95 accepts -g... yes | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking whether __attribute__((visibility())) is supported... yes | |
| checking whether gcc accepts -fvisibility... yes | |
| checking whether f95 accepts -fvisibility... yes | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking minix/config.h usability... no | |
| checking minix/config.h presence... no | |
| checking for minix/config.h... no | |
| checking whether it is safe to define __EXTENSIONS__... yes | |
| checking for gcc... gcc | |
| checking whether we are using the GNU Objective C compiler... no | |
| checking whether gcc accepts -g... no | |
| checking for Objective C++ compiler... trying some possibilities | |
| checking whether g++ can compile ObjC++... no | |
| checking whether can compile ObjC++... no | |
| no working ObjC++ compiler found | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... (cached) /usr/bin/sed | |
| checking for fgrep... /usr/bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking the maximum length of command line arguments... 1572864 | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for a working dd... /usr/bin/dd | |
| checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking for f95 option to produce PIC... -fPIC | |
| checking if f95 PIC flag -fPIC works... yes | |
| checking if f95 static flag -static works... yes | |
| checking if f95 supports -c -o file.o... yes | |
| checking if f95 supports -c -o file.o... (cached) yes | |
| checking whether the f95 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for cos in -lm... yes | |
| checking for sin in -lm... yes | |
| checking for dlopen in -ldl... yes | |
| checking readline/history.h usability... yes | |
| checking readline/history.h presence... yes | |
| checking for readline/history.h... yes | |
| checking readline/readline.h usability... yes | |
| checking readline/readline.h presence... yes | |
| checking for readline/readline.h... yes | |
| checking for rl_callback_read_char in -lreadline... yes | |
| checking for history_truncate_file... yes | |
| checking whether rl_completion_matches exists and is declared... yes | |
| checking for ANSI C header files... (cached) yes | |
| checking for dirent.h that defines DIR... yes | |
| checking for library containing opendir... none required | |
| checking for sys/wait.h that is POSIX.1 compatible... yes | |
| checking arpa/inet.h usability... yes | |
| checking arpa/inet.h presence... yes | |
| checking for arpa/inet.h... yes | |
| checking dl.h usability... no | |
| checking dl.h presence... no | |
| checking for dl.h... no | |
| checking for dlfcn.h... (cached) yes | |
| checking elf.h usability... yes | |
| checking elf.h presence... yes | |
| checking for elf.h... yes | |
| checking features.h usability... yes | |
| checking features.h presence... yes | |
| checking for features.h... yes | |
| checking fcntl.h usability... yes | |
| checking fcntl.h presence... yes | |
| checking for fcntl.h... yes | |
| checking floatingpoint.h usability... no | |
| checking floatingpoint.h presence... no | |
| checking for floatingpoint.h... no | |
| checking fpu_control.h usability... yes | |
| checking fpu_control.h presence... yes | |
| checking for fpu_control.h... yes | |
| checking glob.h usability... yes | |
| checking glob.h presence... yes | |
| checking for glob.h... yes | |
| checking grp.h usability... yes | |
| checking grp.h presence... yes | |
| checking for grp.h... yes | |
| checking langinfo.h usability... yes | |
| checking langinfo.h presence... yes | |
| checking for langinfo.h... yes | |
| checking netdb.h usability... yes | |
| checking netdb.h presence... yes | |
| checking for netdb.h... yes | |
| checking netinet/in.h usability... yes | |
| checking netinet/in.h presence... yes | |
| checking for netinet/in.h... yes | |
| checking pwd.h usability... yes | |
| checking pwd.h presence... yes | |
| checking for pwd.h... yes | |
| checking sched.h usability... yes | |
| checking sched.h presence... yes | |
| checking for sched.h... yes | |
| checking for strings.h... (cached) yes | |
| checking sys/param.h usability... yes | |
| checking sys/param.h presence... yes | |
| checking for sys/param.h... yes | |
| checking sys/resource.h usability... yes | |
| checking sys/resource.h presence... yes | |
| checking for sys/resource.h... yes | |
| checking sys/select.h usability... yes | |
| checking sys/select.h presence... yes | |
| checking for sys/select.h... yes | |
| checking sys/socket.h usability... yes | |
| checking sys/socket.h presence... yes | |
| checking for sys/socket.h... yes | |
| checking for sys/stat.h... (cached) yes | |
| checking sys/time.h usability... yes | |
| checking sys/time.h presence... yes | |
| checking for sys/time.h... yes | |
| checking sys/times.h usability... yes | |
| checking sys/times.h presence... yes | |
| checking for sys/times.h... yes | |
| checking sys/utsname.h usability... yes | |
| checking sys/utsname.h presence... yes | |
| checking for sys/utsname.h... yes | |
| checking for unistd.h... (cached) yes | |
| checking utime.h usability... yes | |
| checking utime.h presence... yes | |
| checking for utime.h... yes | |
| checking stdalign.h usability... yes | |
| checking stdalign.h presence... yes | |
| checking for stdalign.h... yes | |
| checking errno.h usability... yes | |
| checking errno.h presence... yes | |
| checking for errno.h... yes | |
| checking for inttypes.h... (cached) yes | |
| checking limits.h usability... yes | |
| checking limits.h presence... yes | |
| checking for limits.h... yes | |
| checking locale.h usability... yes | |
| checking locale.h presence... yes | |
| checking for locale.h... yes | |
| checking stdarg.h usability... yes | |
| checking stdarg.h presence... yes | |
| checking for stdarg.h... yes | |
| checking stdbool.h usability... yes | |
| checking stdbool.h presence... yes | |
| checking for stdbool.h... yes | |
| checking for stdint.h... (cached) yes | |
| checking for string.h... (cached) yes | |
| checking whether setjmp.h is POSIX.1 compatible... yes | |
| checking whether sigsetjmp is declared... yes | |
| checking whether siglongjmp is declared... yes | |
| checking for GNU C library with version >= 2... yes | |
| checking return type of signal handlers... void | |
| checking for uint64_t... yes | |
| checking for int64_t... yes | |
| checking for int_fast64_t... yes | |
| checking for pid_t... yes | |
| checking for size_t... yes | |
| checking whether SIZE_MAX is declared... yes | |
| checking for blkcnt_t... yes | |
| checking for type of socket length... socklen_t * | |
| checking for stack_t... yes | |
| checking for intptr_t... yes | |
| checking for uintptr_t... yes | |
| checking whether byte ordering is bigendian... no | |
| checking for an ANSI C-conforming const... yes | |
| checking for gcc option to accept ISO C99... none needed | |
| checking for gcc option to accept ISO Standard C... (cached) none needed | |
| checking for inline... inline | |
| checking size of int... 4 | |
| checking size of long... 8 | |
| checking size of long long... 8 | |
| checking size of double... 8 | |
| checking size of size_t... 8 | |
| checking size of long double... 16 | |
| checking whether we can compute C Make dependencies... yes, using $(CC) -MM | |
| checking whether gcc supports -c -o FILE.lo... yes | |
| checking for gcc option to support OpenMP... -fopenmp | |
| checking how to get verbose linking output from f95... -v | |
| checking for Fortran 77 libraries of f95... -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath | |
| checking how to get verbose linking output from gcc... -v | |
| checking for C libraries of gcc... -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgcc_s | |
| checking for dummy main to link with Fortran 77 libraries... none | |
| checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore | |
| checking whether f95 appends underscores to external names... yes | |
| checking whether f95 appends extra underscores to external names... no | |
| checking whether mixed C/Fortran code can be run... yes | |
| checking whether f95 and gcc agree on int and double... yes | |
| checking whether f95 and gcc agree on double complex... yes | |
| checking for f95 option to support OpenMP... -fopenmp | |
| checking whether g++ accepts -M for generating dependencies... yes | |
| checking for g++ option to support OpenMP... -fopenmp | |
| checking whether we can compute ObjC Make dependencies... no | |
| checking whether C runtime needs -D__NO_MATH_INLINES... no | |
| checking for xmkmf... no | |
| checking whether g++ supports C++11 features by default... yes | |
| checking for off_t... yes | |
| checking for working alloca.h... yes | |
| checking for alloca... yes | |
| checking whether alloca is declared... yes | |
| checking whether expm1 exists and is declared... yes | |
| checking whether hypot exists and is declared... yes | |
| checking whether log1p exists and is declared... yes | |
| checking whether log1pl exists and is declared... yes | |
| checking whether log2 exists and is declared... yes | |
| checking whether log10 exists and is declared... yes | |
| checking whether nearbyint exists and is declared... yes | |
| checking whether nearbyintl exists and is declared... yes | |
| checking whether powl exists and is declared... yes | |
| checking whether rint exists and is declared... yes | |
| checking whether rintl exists and is declared... yes | |
| checking whether va_copy exists and is declared... yes | |
| checking for isblank... yes | |
| checking sunmath.h usability... no | |
| checking sunmath.h presence... no | |
| checking for sunmath.h... no | |
| checking for cospi in -lsunmath... no | |
| checking for atanpi... no | |
| checking for atan2pi... no | |
| checking for cospi... no | |
| checking for exp10... yes | |
| checking for pown... no | |
| checking for sinpi... no | |
| checking for tanpi... no | |
| checking for __cospi... no | |
| checking for __sinpi... no | |
| checking for __tanpi... no | |
| checking for fseeko... yes | |
| checking for ftello... yes | |
| checking for matherr... yes | |
| checking whether fcntl exists and is declared... yes | |
| checking whether getgrgid exists and is declared... yes | |
| checking whether getpwuid exists and is declared... yes | |
| checking whether kill exists and is declared... yes | |
| checking whether sigaction exists and is declared... yes | |
| checking whether sigaltstack exists and is declared... yes | |
| checking whether sigemptyset exists and is declared... yes | |
| checking whether fdopen exists and is declared... yes | |
| checking whether popen exists and is declared... yes | |
| checking whether getline exists and is declared... yes | |
| checking whether setenv exists and is declared... yes | |
| checking whether unsetenv exists and is declared... yes | |
| checking whether getrlimit exists and is declared... yes | |
| checking whether getrusage exists and is declared... yes | |
| checking whether getpriority exists and is declared... yes | |
| checking whether chmod exists and is declared... yes | |
| checking whether mkfifo exists and is declared... yes | |
| checking whether stat exists and is declared... yes | |
| checking whether umask exists and is declared... yes | |
| checking whether gettimeofday exists and is declared... yes | |
| checking whether utimes exists and is declared... yes | |
| checking whether times exists and is declared... yes | |
| checking whether gmtime_r exists and is declared... yes | |
| checking whether localtime_r exists and is declared... yes | |
| checking whether nl_langinfo exists and is declared... yes | |
| checking whether access exists and is declared... yes | |
| checking whether chdir exists and is declared... yes | |
| checking whether execv exists and is declared... yes | |
| checking whether ftruncate exists and is declared... yes | |
| checking whether getcwd exists and is declared... yes | |
| checking whether geteuid exists and is declared... yes | |
| checking whether getuid exists and is declared... yes | |
| checking whether link exists and is declared... yes | |
| checking whether readlink exists and is declared... yes | |
| checking whether symlink exists and is declared... yes | |
| checking whether sysconf exists and is declared... yes | |
| checking whether sched_setaffinity exists and is declared... yes | |
| checking whether sched_getaffinity exists and is declared... yes | |
| checking whether utime exists and is declared... yes | |
| checking for clock_gettime in -lrt... yes | |
| checking whether clock_gettime exists and is declared... yes | |
| checking whether timespec_get exists and is declared... yes | |
| checking for putenv... yes | |
| checking whether putenv is declared... yes | |
| checking for vasprintf... yes | |
| checking whether vasprintf is declared... yes | |
| checking for mempcpy... yes | |
| checking for realpath... yes | |
| checking whether realpath is declared... yes | |
| checking whether glob exists and is declared... yes | |
| checking for isnan... yes | |
| checking whether isfinite is declared... yes | |
| checking whether isnan is declared... yes | |
| checking whether you have IEEE 754 floating-point arithmetic... yes | |
| checking whether putenv("FOO") can unset an environment variable... yes | |
| checking whether putenv("FOO=") can unset an environment variable... no | |
| checking for nl_langinfo and CODESET... yes | |
| checking for mkdtemp... yes | |
| checking for strdup... yes | |
| checking for strncasecmp... yes | |
| checking whether mkdtemp is declared... yes | |
| checking whether strdup is declared... yes | |
| checking whether strncasecmp is declared... yes | |
| checking for library containing connect... none required | |
| checking for library containing gethostbyname... none required | |
| checking for library containing xdr_string... none required | |
| checking for __setfpucw... no | |
| checking for working calloc... yes | |
| checking for working isfinite... yes | |
| checking for working log1p... yes | |
| checking whether ftell works correctly on files opened for append... yes | |
| checking for working sigaction... yes | |
| checking whether mktime sets errno... no | |
| checking whether mktime works correctly outside 1902-2037... yes | |
| checking complex.h usability... yes | |
| checking complex.h presence... yes | |
| checking for complex.h... yes | |
| checking for double complex... yes | |
| checking whether C99 double complex is supported... yes | |
| checking whether cabs exists and is declared... yes | |
| checking whether carg exists and is declared... yes | |
| checking whether cexp exists and is declared... yes | |
| checking whether clog exists and is declared... yes | |
| checking whether csqrt exists and is declared... yes | |
| checking whether cpow exists and is declared... yes | |
| checking whether ccos exists and is declared... yes | |
| checking whether csin exists and is declared... yes | |
| checking whether ctan exists and is declared... yes | |
| checking whether cacos exists and is declared... yes | |
| checking whether casin exists and is declared... yes | |
| checking whether catan exists and is declared... yes | |
| checking whether ccosh exists and is declared... yes | |
| checking whether csinh exists and is declared... yes | |
| checking whether ctanh exists and is declared... yes | |
| checking whether 'struct tm' includes tm_zone... yes | |
| checking whether 'struct tm' includes tm_gmtoff... yes | |
| checking iconv.h usability... yes | |
| checking iconv.h presence... yes | |
| checking for iconv.h... yes | |
| checking for iconv... yes | |
| checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes | |
| checking for iconvlist... no | |
| checking for iconv... yes | |
| checking for iconv declaration... | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking wchar.h usability... yes | |
| checking wchar.h presence... yes | |
| checking for wchar.h... yes | |
| checking wctype.h usability... yes | |
| checking wctype.h presence... yes | |
| checking for wctype.h... yes | |
| checking whether mbrtowc exists and is declared... yes | |
| checking whether wcrtomb exists and is declared... yes | |
| checking whether wcscoll exists and is declared... yes | |
| checking whether wcsftime exists and is declared... yes | |
| checking whether wcstod exists and is declared... yes | |
| checking whether mbstowcs exists and is declared... yes | |
| checking whether wcstombs exists and is declared... yes | |
| checking whether wctrans exists and is declared... yes | |
| checking whether iswblank exists and is declared... yes | |
| checking whether wctype exists and is declared... yes | |
| checking whether iswctype exists and is declared... yes | |
| checking for wctrans_t... yes | |
| checking for mbstate_t... yes | |
| checking for ICU... yes | |
| checking for X... libraries , headers | |
| checking for gethostbyname... yes | |
| checking for connect... yes | |
| checking for remove... yes | |
| checking for shmat... yes | |
| checking for IceConnectionNumber in -lICE... yes | |
| checking X11/Intrinsic.h usability... yes | |
| checking X11/Intrinsic.h presence... yes | |
| checking for X11/Intrinsic.h... yes | |
| checking for XtToolkitInitialize in -lXt... yes | |
| using X11 ... yes | |
| checking for KeySym... yes | |
| checking X11/Xmu/Atoms.h usability... no | |
| checking X11/Xmu/Atoms.h presence... no | |
| checking for X11/Xmu/Atoms.h... no | |
| checking whether pkg-config knows about cairo and pango... yes | |
| checking whether cairo including pango is >= 1.2 and works... yes | |
| checking for tclConfig.sh... no | |
| checking for tclConfig.sh in library (sub)directories... no | |
| checking for tkConfig.sh... no | |
| checking for tkConfig.sh in library (sub)directories... no | |
| checking for tcl.h... no | |
| checking for BSD networking... yes | |
| checking rpc/types.h usability... yes | |
| checking rpc/types.h presence... yes | |
| checking for rpc/types.h... yes | |
| checking for rpc/xdr.h... yes | |
| checking for XDR support... yes | |
| checking for inflateInit2_ in -lz... yes | |
| checking zlib.h usability... yes | |
| checking zlib.h presence... yes | |
| checking for zlib.h... yes | |
| checking if zlib version >= 1.2.5... yes | |
| checking whether zlib support suffices... yes | |
| checking mmap support for zlib... yes | |
| checking for BZ2_bzlibVersion in -lbz2... yes | |
| checking bzlib.h usability... yes | |
| checking bzlib.h presence... yes | |
| checking for bzlib.h... yes | |
| checking if bzip2 version >= 1.0.6... yes | |
| checking whether bzip2 support suffices... no | |
| checking for lzma_version_number in -llzma... yes | |
| checking lzma.h usability... yes | |
| checking lzma.h presence... yes | |
| checking for lzma.h... yes | |
| checking if lzma version >= 5.0.3... yes | |
| checking for pcre_fullinfo in -lpcre... yes | |
| checking pcre.h usability... yes | |
| checking pcre.h presence... yes | |
| checking for pcre.h... yes | |
| checking pcre/pcre.h usability... no | |
| checking pcre/pcre.h presence... no | |
| checking for pcre/pcre.h... no | |
| checking if PCRE version >= 8.10, < 10.0 and has UTF-8 support... yes | |
| checking if PCRE version >= 8.32... yes | |
| checking whether PCRE support suffices... yes | |
| checking for curl-config... /usr/bin/curl-config | |
| checking libcurl version ... 7.52.1 | |
| checking curl/curl.h usability... yes | |
| checking curl/curl.h presence... yes | |
| checking for curl/curl.h... yes | |
| checking if libcurl is version 7 and >= 7.28.0... yes | |
| checking if libcurl supports https... yes | |
| checking if jpeglib version >= 6b... yes | |
| checking for jpeg_destroy_compress in -ljpeg... yes | |
| checking if libpng version >= 1.2.7... yes | |
| checking for png_create_write_struct in -lpng... yes | |
| checking tiffio.h usability... yes | |
| checking tiffio.h presence... yes | |
| checking for tiffio.h... yes | |
| checking for TIFFOpen in -ltiff... yes | |
| checking whether leap seconds are treated according to POSIX... yes | |
| checking for inline... inline | |
| checking for sys/time.h... (cached) yes | |
| checking for stdlib.h... (cached) yes | |
| checking for unistd.h... (cached) yes | |
| checking for sys/param.h... (cached) yes | |
| checking for struct stat.st_atim.tv_nsec... yes | |
| checking whether struct stat.st_atim is of type struct timespec... yes | |
| checking for setitimer... yes | |
| checking for special C compiler options needed for large files... no | |
| checking for _FILE_OFFSET_BITS value needed for large files... no | |
| checking for _LARGEFILE_SOURCE value needed for large files... no | |
| checking whether KERN_USRSTACK sysctl is supported... no | |
| checking for visible __lib_stack_end... yes | |
| checking for lpr... no | |
| checking for lp... no | |
| checking for paperconf... /usr/bin/paperconf | |
| checking for gfortran... gfortran | |
| checking whether we are using the GNU Fortran compiler... yes | |
| checking whether gfortran accepts -g... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking for gfortran option to produce PIC... -fPIC | |
| checking if gfortran PIC flag -fPIC works... yes | |
| checking if gfortran static flag -static works... yes | |
| checking if gfortran supports -c -o file.o... yes | |
| checking if gfortran supports -c -o file.o... (cached) yes | |
| checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for Fortran flag to compile .f90 files... none | |
| checking for Fortran flag to compile .f95 files... none | |
| checking for gfortran option to support OpenMP... -fopenmp | |
| checking whether NLS is requested... yes | |
| Configuring src/extra/intl directory | |
| checking for a thread-safe mkdir -p... /usr/bin/mkdir -p | |
| checking whether we are using the GNU C Library 2 or newer... yes | |
| checking for ranlib... (cached) ranlib | |
| checking for simple visibility declarations... yes | |
| checking for stdint.h... yes | |
| checking for getpagesize... yes | |
| checking for working mmap... yes | |
| checking whether integer division by zero raises SIGFPE... yes | |
| checking for inttypes.h... yes | |
| checking for unsigned long long int... yes | |
| checking for inttypes.h... (cached) yes | |
| checking whether the inttypes.h PRIxNN macros are broken... no | |
| checking for ld used by gcc... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking for shared library run path origin... done | |
| checking whether imported symbols can be declared weak... yes | |
| checking for multithread API to use... none | |
| checking argz.h usability... yes | |
| checking argz.h presence... yes | |
| checking for argz.h... yes | |
| checking for inttypes.h... (cached) yes | |
| checking for limits.h... (cached) yes | |
| checking for unistd.h... (cached) yes | |
| checking for sys/param.h... (cached) yes | |
| checking for getcwd... yes | |
| checking for getegid... yes | |
| checking for geteuid... yes | |
| checking for getgid... yes | |
| checking for getuid... yes | |
| checking for mempcpy... (cached) yes | |
| checking for munmap... yes | |
| checking for stpcpy... yes | |
| checking for strcasecmp... yes | |
| checking for strdup... (cached) yes | |
| checking for strtoul... yes | |
| checking for tsearch... yes | |
| checking for argz_count... yes | |
| checking for argz_stringify... yes | |
| checking for argz_next... yes | |
| checking for __fsetlocking... yes | |
| checking whether feof_unlocked is declared... yes | |
| checking whether fgets_unlocked is declared... yes | |
| checking for iconv... (cached) yes | |
| checking for iconv declaration... (cached) | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking for NL_LOCALE_NAME macro... yes | |
| checking for bison... bison | |
| checking version of bison... 3.0.4, ok | |
| checking for long long int... yes | |
| checking for long double... yes | |
| checking for wchar_t... yes | |
| checking for wint_t... yes | |
| checking for intmax_t... yes | |
| checking whether printf() supports POSIX/XSI format strings... yes | |
| checking whether we are using the GNU C Library 2.1 or newer... yes | |
| checking for stdint.h... (cached) yes | |
| checking for SIZE_MAX... yes | |
| checking for stdint.h... (cached) yes | |
| checking for CFPreferencesCopyAppValue... no | |
| checking for CFLocaleCopyCurrent... no | |
| checking for ptrdiff_t... yes | |
| checking stddef.h usability... yes | |
| checking stddef.h presence... yes | |
| checking for stddef.h... yes | |
| checking for stdlib.h... (cached) yes | |
| checking for string.h... (cached) yes | |
| checking for asprintf... yes | |
| checking for fwprintf... yes | |
| checking for putenv... (cached) yes | |
| checking for setenv... yes | |
| checking for setlocale... yes | |
| checking for snprintf... yes | |
| checking for wcslen... yes | |
| checking whether _snprintf is declared... no | |
| checking whether _snwprintf is declared... no | |
| checking whether getc_unlocked is declared... yes | |
| checking for nl_langinfo and CODESET... (cached) yes | |
| checking for LC_MESSAGES... yes | |
| checking for CFPreferencesCopyAppValue... (cached) no | |
| checking for CFLocaleCopyCurrent... (cached) no | |
| checking whether included gettext is requested... no | |
| checking for GNU gettext in libc... yes | |
| checking whether to use NLS... yes | |
| checking where the gettext function comes from... libc | |
| Finished configuring src/extra/intl directory | |
| using as R_SHELL for scripts ... /bin/bash | |
| configure: creating ./config.status | |
| config.status: creating Makeconf | |
| config.status: creating Makefile | |
| config.status: creating doc/Makefile | |
| config.status: creating doc/html/Makefile | |
| config.status: creating doc/manual/Makefile | |
| config.status: creating etc/Makefile | |
| config.status: creating etc/Makeconf | |
| config.status: creating etc/Renviron | |
| config.status: creating etc/javaconf | |
| config.status: creating etc/ldpaths | |
| config.status: creating m4/Makefile | |
| config.status: creating po/Makefile | |
| config.status: creating share/Makefile | |
| config.status: creating src/Makefile | |
| config.status: creating src/appl/Makefile | |
| config.status: creating src/extra/Makefile | |
| config.status: creating src/extra/blas/Makefile | |
| config.status: creating src/extra/intl/Makefile | |
| config.status: creating src/extra/tre/Makefile | |
| config.status: creating src/extra/tzone/Makefile | |
| config.status: creating src/extra/xdr/Makefile | |
| config.status: creating src/include/Makefile | |
| config.status: creating src/include/Rmath.h0 | |
| config.status: creating src/include/R_ext/Makefile | |
| config.status: creating src/library/Recommended/Makefile | |
| config.status: creating src/library/Makefile | |
| config.status: creating src/library/base/DESCRIPTION | |
| config.status: creating src/library/base/Makefile | |
| config.status: creating src/library/compiler/DESCRIPTION | |
| config.status: creating src/library/compiler/Makefile | |
| config.status: creating src/library/datasets/DESCRIPTION | |
| config.status: creating src/library/datasets/Makefile | |
| config.status: creating src/library/graphics/DESCRIPTION | |
| config.status: creating src/library/graphics/Makefile | |
| config.status: creating src/library/graphics/src/Makefile | |
| config.status: creating src/library/grDevices/DESCRIPTION | |
| config.status: creating src/library/grDevices/Makefile | |
| config.status: creating src/library/grDevices/src/Makefile | |
| config.status: creating src/library/grDevices/src/cairo/Makefile | |
| config.status: creating src/library/grid/DESCRIPTION | |
| config.status: creating src/library/grid/Makefile | |
| config.status: creating src/library/grid/src/Makefile | |
| config.status: creating src/library/methods/DESCRIPTION | |
| config.status: creating src/library/methods/Makefile | |
| config.status: creating src/library/methods/src/Makefile | |
| config.status: creating src/library/parallel/DESCRIPTION | |
| config.status: creating src/library/parallel/Makefile | |
| config.status: creating src/library/parallel/src/Makefile | |
| config.status: creating src/library/profile/Makefile | |
| config.status: creating src/library/stats/DESCRIPTION | |
| config.status: creating src/library/stats/Makefile | |
| config.status: creating src/library/stats/src/Makefile | |
| config.status: creating src/library/stats4/DESCRIPTION | |
| config.status: creating src/library/stats4/Makefile | |
| config.status: creating src/library/splines/DESCRIPTION | |
| config.status: creating src/library/splines/Makefile | |
| config.status: creating src/library/splines/src/Makefile | |
| config.status: creating src/library/tcltk/DESCRIPTION | |
| config.status: creating src/library/tcltk/Makefile | |
| config.status: creating src/library/tcltk/src/Makefile | |
| config.status: creating src/library/tools/DESCRIPTION | |
| config.status: creating src/library/tools/Makefile | |
| config.status: creating src/library/tools/src/Makefile | |
| config.status: creating src/library/translations/DESCRIPTION | |
| config.status: creating src/library/translations/Makefile | |
| config.status: creating src/library/utils/DESCRIPTION | |
| config.status: creating src/library/utils/Makefile | |
| config.status: creating src/library/utils/src/Makefile | |
| config.status: creating src/main/Makefile | |
| config.status: creating src/modules/Makefile | |
| config.status: creating src/modules/X11/Makefile | |
| config.status: creating src/modules/internet/Makefile | |
| config.status: creating src/modules/lapack/Makefile | |
| config.status: creating src/nmath/Makefile | |
| config.status: creating src/nmath/standalone/Makefile | |
| config.status: creating src/scripts/Makefile | |
| config.status: creating src/scripts/R.sh | |
| config.status: creating src/scripts/Rcmd | |
| config.status: creating src/scripts/f77_f2c | |
| config.status: creating src/scripts/javareconf | |
| config.status: creating src/scripts/mkinstalldirs | |
| config.status: creating src/scripts/pager | |
| config.status: creating src/scripts/rtags | |
| config.status: creating src/unix/Makefile | |
| config.status: creating tests/Makefile | |
| config.status: creating tests/Embedding/Makefile | |
| config.status: creating tests/Examples/Makefile | |
| config.status: creating tools/Makefile | |
| config.status: creating src/include/config.h | |
| config.status: executing libtool commands | |
| config.status: executing stamp-h commands | |
| R is now configured for x86_64-pc-linux-gnu | |
| Source directory: . | |
| Installation directory: /usr/local | |
| C compiler: gcc -g -O2 | |
| Fortran 77 compiler: f95 -g -O2 | |
| C++ compiler: g++ -g -O2 | |
| C++11 compiler: g++ -g -O2 | |
| Fortran 90/95 compiler: gfortran -g -O2 | |
| Obj-C compiler: | |
| Interfaces supported: X11 | |
| External libraries: readline, curl | |
| Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU | |
| Options enabled: shared BLAS, R profiling | |
| Capabilities skipped: | |
| Options not enabled: memory profiling | |
| Recommended packages: no | |
| make: Nothing to be done for 'html-non-svn'. | |
| creating FAQ | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/m4' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Nothing to be done for 'R'. | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| creating src/scripts/R.fe | |
| make[3]: Entering directory '/r-source/src/scripts' | |
| mkdir -p -- ../../bin | |
| make[3]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Entering directory '/r-source/src/include' | |
| mkdir -p -- ../../include | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| mkdir -p -- ../../../include/R_ext | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[4]: Entering directory '/r-source/src/extra/blas' | |
| f95 -fopenmp -fpic -g -O2 -c blas.f -o blas.o | |
| f95 -fopenmp -fpic -g -O2 -c cmplxblas.f -o cmplxblas.o | |
| make[4]: Entering directory '/r-source/src/extra/tre' | |
| making regcomp.d from regcomp.c | |
| making regerror.d from regerror.c | |
| making regexec.d from regexec.c | |
| making tre-compile.d from tre-compile.c | |
| making tre-ast.d from tre-ast.c | |
| making tre-match-approx.d from tre-match-approx.c | |
| making tre-match-backtrack.d from tre-match-backtrack.c | |
| making tre-match-parallel.d from tre-match-parallel.c | |
| making tre-mem.d from tre-mem.c | |
| making tre-parse.d from tre-parse.c | |
| making tre-stack.d from tre-stack.c | |
| making xmalloc.d from xmalloc.c | |
| make[4]: Leaving directory '/r-source/src/extra/tre' | |
| make[4]: Entering directory '/r-source/src/extra/tre' | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regcomp.c -o regcomp.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regerror.c -o regerror.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regexec.c -o regexec.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-ast.c -o tre-ast.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-compile.c -o tre-compile.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-approx.c -o tre-match-approx.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-backtrack.c -o tre-match-backtrack.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-parallel.c -o tre-match-parallel.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-mem.c -o tre-mem.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-parse.c -o tre-parse.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-stack.c -o tre-stack.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c xmalloc.c -o xmalloc.o | |
| ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o | |
| ranlib libtre.a | |
| make[4]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| gcc -shared -fopenmp -L/usr/local/lib64 -o libRblas.so blas.o cmplxblas.o -lgfortran -lm -lquadmath | |
| make[4]: Leaving directory '/r-source/src/extra/blas' | |
| make[4]: Entering directory '/r-source/src/extra/blas' | |
| mkdir -p -- /r-source/lib | |
| make[4]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| making integrate.d from integrate.c | |
| making interv.d from interv.c | |
| making maxcol.d from maxcol.c | |
| making optim.d from optim.c | |
| making pretty.d from pretty.c | |
| making uncmin.d from uncmin.c | |
| make[3]: Entering directory '/r-source/src/appl' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c integrate.c -o integrate.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c interv.c -o interv.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c maxcol.c -o maxcol.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c optim.c -o optim.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pretty.c -o pretty.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c uncmin.c -o uncmin.o | |
| f95 -fopenmp -g -O2 -c dchdc.f -o dchdc.o | |
| f95 -fopenmp -g -O2 -c dpbfa.f -o dpbfa.o | |
| f95 -fopenmp -g -O2 -c dpbsl.f -o dpbsl.o | |
| f95 -fopenmp -g -O2 -c dpoco.f -o dpoco.o | |
| f95 -fopenmp -g -O2 -c dpodi.f -o dpodi.o | |
| f95 -fopenmp -g -O2 -c dpofa.f -o dpofa.o | |
| f95 -fopenmp -g -O2 -c dposl.f -o dposl.o | |
| f95 -fopenmp -g -O2 -c dqrdc.f -o dqrdc.o | |
| f95 -fopenmp -g -O2 -c dqrdc2.f -o dqrdc2.o | |
| f95 -fopenmp -g -O2 -c dqrls.f -o dqrls.o | |
| f95 -fopenmp -g -O2 -c dqrsl.f -o dqrsl.o | |
| f95 -fopenmp -g -O2 -c dqrutl.f -o dqrutl.o | |
| f95 -fopenmp -g -O2 -c dsvdc.f -o dsvdc.o | |
| f95 -fopenmp -g -O2 -c dtrco.f -o dtrco.o | |
| f95 -fopenmp -g -O2 -c dtrsl.f -o dtrsl.o | |
| ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o | |
| ranlib libappl.a | |
| make[3]: Leaving directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| making mlutils.d from mlutils.c | |
| making fmax2.d from fmax2.c | |
| making d1mach.d from d1mach.c | |
| making i1mach.d from i1mach.c | |
| making fprec.d from fprec.c | |
| making fmin2.d from fmin2.c | |
| making fround.d from fround.c | |
| making ftrunc.d from ftrunc.c | |
| making sign.d from sign.c | |
| making fsign.d from fsign.c | |
| making imin2.d from imin2.c | |
| making imax2.d from imax2.c | |
| making chebyshev.d from chebyshev.c | |
| making log1p.d from log1p.c | |
| making expm1.d from expm1.c | |
| making lgammacor.d from lgammacor.c | |
| making gammalims.d from gammalims.c | |
| making bd0.d from bd0.c | |
| making gamma.d from gamma.c | |
| making stirlerr.d from stirlerr.c | |
| making lgamma.d from lgamma.c | |
| making gamma_cody.d from gamma_cody.c | |
| making beta.d from beta.c | |
| making lbeta.d from lbeta.c | |
| making polygamma.d from polygamma.c | |
| making cospi.d from cospi.c | |
| making bessel_i.d from bessel_i.c | |
| making bessel_j.d from bessel_j.c | |
| making bessel_k.d from bessel_k.c | |
| making bessel_y.d from bessel_y.c | |
| making choose.d from choose.c | |
| making snorm.d from snorm.c | |
| making sexp.d from sexp.c | |
| making dgamma.d from dgamma.c | |
| making pgamma.d from pgamma.c | |
| making qgamma.d from qgamma.c | |
| making rgamma.d from rgamma.c | |
| making dbeta.d from dbeta.c | |
| making pbeta.d from pbeta.c | |
| making qbeta.d from qbeta.c | |
| making rbeta.d from rbeta.c | |
| making dunif.d from dunif.c | |
| making punif.d from punif.c | |
| making qunif.d from qunif.c | |
| making runif.d from runif.c | |
| making dnorm.d from dnorm.c | |
| making pnorm.d from pnorm.c | |
| making qnorm.d from qnorm.c | |
| making rnorm.d from rnorm.c | |
| making dlnorm.d from dlnorm.c | |
| making plnorm.d from plnorm.c | |
| making rlnorm.d from rlnorm.c | |
| making qlnorm.d from qlnorm.c | |
| making df.d from df.c | |
| making pf.d from pf.c | |
| making qf.d from qf.c | |
| making rf.d from rf.c | |
| making dt.d from dt.c | |
| making dnf.d from dnf.c | |
| making pt.d from pt.c | |
| making qt.d from qt.c | |
| making rt.d from rt.c | |
| making dnt.d from dnt.c | |
| making dchisq.d from dchisq.c | |
| making pchisq.d from pchisq.c | |
| making qchisq.d from qchisq.c | |
| making rchisq.d from rchisq.c | |
| making rnchisq.d from rnchisq.c | |
| making dbinom.d from dbinom.c | |
| making pbinom.d from pbinom.c | |
| making qbinom.d from qbinom.c | |
| making rmultinom.d from rmultinom.c | |
| making rbinom.d from rbinom.c | |
| making dcauchy.d from dcauchy.c | |
| making pcauchy.d from pcauchy.c | |
| making qcauchy.d from qcauchy.c | |
| making rcauchy.d from rcauchy.c | |
| making dexp.d from dexp.c | |
| making pexp.d from pexp.c | |
| making qexp.d from qexp.c | |
| making rexp.d from rexp.c | |
| making dgeom.d from dgeom.c | |
| making pgeom.d from pgeom.c | |
| making qgeom.d from qgeom.c | |
| making rgeom.d from rgeom.c | |
| making dhyper.d from dhyper.c | |
| making phyper.d from phyper.c | |
| making qhyper.d from qhyper.c | |
| making rhyper.d from rhyper.c | |
| making dnbinom.d from dnbinom.c | |
| making pnbinom.d from pnbinom.c | |
| making qnbinom.d from qnbinom.c | |
| making rnbinom.d from rnbinom.c | |
| making dpois.d from dpois.c | |
| making ppois.d from ppois.c | |
| making qpois.d from qpois.c | |
| making rpois.d from rpois.c | |
| making dweibull.d from dweibull.c | |
| making pweibull.d from pweibull.c | |
| making qweibull.d from qweibull.c | |
| making rweibull.d from rweibull.c | |
| making plogis.d from plogis.c | |
| making dlogis.d from dlogis.c | |
| making qlogis.d from qlogis.c | |
| making rlogis.d from rlogis.c | |
| making dnchisq.d from dnchisq.c | |
| making pnchisq.d from pnchisq.c | |
| making qnchisq.d from qnchisq.c | |
| making dnbeta.d from dnbeta.c | |
| making pnbeta.d from pnbeta.c | |
| making qnbeta.d from qnbeta.c | |
| making pnf.d from pnf.c | |
| making pnt.d from pnt.c | |
| making qnf.d from qnf.c | |
| making qnt.d from qnt.c | |
| making toms708.d from toms708.c | |
| making wilcox.d from wilcox.c | |
| making qtukey.d from qtukey.c | |
| making ptukey.d from ptukey.c | |
| making signrank.d from signrank.c | |
| make[3]: Entering directory '/r-source/src/nmath' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c mlutils.c -o mlutils.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c d1mach.c -o d1mach.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c i1mach.c -o i1mach.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fmax2.c -o fmax2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fmin2.c -o fmin2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fprec.c -o fprec.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fround.c -o fround.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ftrunc.c -o ftrunc.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sign.c -o sign.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fsign.c -o fsign.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c imax2.c -o imax2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c imin2.c -o imin2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c chebyshev.c -o chebyshev.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c log1p.c -o log1p.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c expm1.c -o expm1.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lgammacor.c -o lgammacor.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gammalims.c -o gammalims.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c stirlerr.c -o stirlerr.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bd0.c -o bd0.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gamma.c -o gamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lgamma.c -o lgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gamma_cody.c -o gamma_cody.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c beta.c -o beta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lbeta.c -o lbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c polygamma.c -o polygamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c cospi.c -o cospi.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_i.c -o bessel_i.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_j.c -o bessel_j.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_k.c -o bessel_k.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_y.c -o bessel_y.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c choose.c -o choose.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c snorm.c -o snorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sexp.c -o sexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dgamma.c -o dgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pgamma.c -o pgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qgamma.c -o qgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rgamma.c -o rgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dbeta.c -o dbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pbeta.c -o pbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qbeta.c -o qbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rbeta.c -o rbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dunif.c -o dunif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c punif.c -o punif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qunif.c -o qunif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c runif.c -o runif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnorm.c -o dnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnorm.c -o pnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnorm.c -o qnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnorm.c -o rnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dlnorm.c -o dlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c plnorm.c -o plnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qlnorm.c -o qlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlnorm.c -o rlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c df.c -o df.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pf.c -o pf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qf.c -o qf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rf.c -o rf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnf.c -o dnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dt.c -o dt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pt.c -o pt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qt.c -o qt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rt.c -o rt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnt.c -o dnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dchisq.c -o dchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pchisq.c -o pchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qchisq.c -o qchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rchisq.c -o rchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnchisq.c -o rnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dbinom.c -o dbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pbinom.c -o pbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qbinom.c -o qbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rbinom.c -o rbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rmultinom.c -o rmultinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dcauchy.c -o dcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pcauchy.c -o pcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qcauchy.c -o qcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rcauchy.c -o rcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dexp.c -o dexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pexp.c -o pexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qexp.c -o qexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rexp.c -o rexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dgeom.c -o dgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pgeom.c -o pgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qgeom.c -o qgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rgeom.c -o rgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dhyper.c -o dhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c phyper.c -o phyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qhyper.c -o qhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rhyper.c -o rhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnbinom.c -o dnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnbinom.c -o pnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnbinom.c -o qnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnbinom.c -o rnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dpois.c -o dpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ppois.c -o ppois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qpois.c -o qpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rpois.c -o rpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dweibull.c -o dweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pweibull.c -o pweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qweibull.c -o qweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rweibull.c -o rweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dlogis.c -o dlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c plogis.c -o plogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qlogis.c -o qlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlogis.c -o rlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnchisq.c -o dnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnchisq.c -o pnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnchisq.c -o qnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnbeta.c -o dnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnbeta.c -o pnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnbeta.c -o qnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnf.c -o pnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnt.c -o pnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnf.c -o qnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnt.c -o qnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ptukey.c -o ptukey.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qtukey.c -o qtukey.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c toms708.c -o toms708.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c wilcox.c -o wilcox.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c signrank.c -o signrank.o | |
| ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o | |
| ranlib libnmath.a | |
| make[3]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| config.status: creating src/unix/Makefile | |
| making Rembedded.d from Rembedded.c | |
| making dynload.d from dynload.c | |
| making sys-unix.d from sys-unix.c | |
| making system.d from system.c | |
| making sys-std.d from sys-std.c | |
| making X11.d from X11.c | |
| make[3]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rembedded.c -o Rembedded.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dynload.c -o dynload.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c system.c -o system.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sys-unix.c -o sys-unix.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sys-std.c -o sys-std.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c X11.c -o X11.o | |
| ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o | |
| ranlib libunix.a | |
| make[3]: Leaving directory '/r-source/src/unix' | |
| make[3]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib64 -DR_HOME='"/r-source"' \ | |
| -o Rscript ./Rscript.c | |
| make[3]: Leaving directory '/r-source/src/unix' | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/main' | |
| config.status: creating src/main/Makefile | |
| making CommandLineArgs.d from CommandLineArgs.c | |
| making Rdynload.d from Rdynload.c | |
| making RNG.d from RNG.c | |
| making Renviron.d from Renviron.c | |
| making apply.d from apply.c | |
| making agrep.d from agrep.c | |
| making arithmetic.d from arithmetic.c | |
| making array.d from array.c | |
| making attrib.d from attrib.c | |
| making bind.d from bind.c | |
| making character.d from character.c | |
| making builtin.d from builtin.c | |
| making colors.d from colors.c | |
| making coerce.d from coerce.c | |
| making complex.d from complex.c | |
| making connections.d from connections.c | |
| making context.d from context.c | |
| making cum.d from cum.c | |
| making dcf.d from dcf.c | |
| making datetime.d from datetime.c | |
| making debug.d from debug.c | |
| making deparse.d from deparse.c | |
| making devices.d from devices.c | |
| making dotcode.d from dotcode.c | |
| making dounzip.d from dounzip.c | |
| making dstruct.d from dstruct.c | |
| making duplicate.d from duplicate.c | |
| making edit.d from edit.c | |
| making engine.d from engine.c | |
| making envir.d from envir.c | |
| making errors.d from errors.c | |
| making eval.d from eval.c | |
| making format.d from format.c | |
| making gevents.d from gevents.c | |
| making gram.d from gram.c | |
| making gram-ex.d from gram-ex.c | |
| making graphics.d from graphics.c | |
| making grep.d from grep.c | |
| making identical.d from identical.c | |
| making inlined.d from inlined.c | |
| making inspect.d from inspect.c | |
| making internet.d from internet.c | |
| making iosupport.d from iosupport.c | |
| making lapack.d from lapack.c | |
| making list.d from list.c | |
| making localecharset.d from localecharset.c | |
| making logic.d from logic.c | |
| making main.d from main.c | |
| making mapply.d from mapply.c | |
| making match.d from match.c | |
| making memory.d from memory.c | |
| making names.d from names.c | |
| making objects.d from objects.c | |
| making options.d from options.c | |
| making paste.d from paste.c | |
| making platform.d from platform.c | |
| making plot.d from plot.c | |
| making plot3d.d from plot3d.c | |
| making plotmath.d from plotmath.c | |
| making printarray.d from printarray.c | |
| making print.d from print.c | |
| making printvector.d from printvector.c | |
| making printutils.d from printutils.c | |
| making qsort.d from qsort.c | |
| making radixsort.d from radixsort.c | |
| making random.d from random.c | |
| making raw.d from raw.c | |
| making relop.d from relop.c | |
| making registration.d from registration.c | |
| making rlocale.d from rlocale.c | |
| making saveload.d from saveload.c | |
| making scan.d from scan.c | |
| making seq.d from seq.c | |
| making serialize.d from serialize.c | |
| making sort.d from sort.c | |
| making source.d from source.c | |
| making split.d from split.c | |
| making sprintf.d from sprintf.c | |
| making startup.d from startup.c | |
| making subassign.d from subassign.c | |
| making subscript.d from subscript.c | |
| making subset.d from subset.c | |
| making summary.d from summary.c | |
| making sysutils.d from sysutils.c | |
| making times.d from times.c | |
| making unique.d from unique.c | |
| making util.d from util.c | |
| making version.d from version.c | |
| making g_alab_her.d from g_alab_her.c | |
| making g_cntrlify.d from g_cntrlify.c | |
| making g_fontdb.d from g_fontdb.c | |
| making g_her_glyph.d from g_her_glyph.c | |
| making Rmain.d from Rmain.c | |
| making alloca.d from alloca.c | |
| making mkdtemp.d from mkdtemp.c | |
| making strdup.d from strdup.c | |
| making strncasecmp.d from strncasecmp.c | |
| make[3]: Entering directory '/r-source/src/main' | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rmain.c -o Rmain.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c CommandLineArgs.c -o CommandLineArgs.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rdynload.c -o Rdynload.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Renviron.c -o Renviron.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c RNG.c -o RNG.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c agrep.c -o agrep.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c apply.c -o apply.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c arithmetic.c -o arithmetic.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c array.c -o array.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c attrib.c -o attrib.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c bind.c -o bind.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c builtin.c -o builtin.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c character.c -o character.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c coerce.c -o coerce.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c colors.c -o colors.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c complex.c -o complex.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c connections.c -o connections.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c context.c -o context.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c cum.c -o cum.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dcf.c -o dcf.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c datetime.c -o datetime.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c debug.c -o debug.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c deparse.c -o deparse.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c devices.c -o devices.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dotcode.c -o dotcode.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dounzip.c -o dounzip.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dstruct.c -o dstruct.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c duplicate.c -o duplicate.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c edit.c -o edit.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c engine.c -o engine.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c envir.c -o envir.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c errors.c -o errors.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c eval.c -o eval.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c format.c -o format.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gevents.c -o gevents.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gram.c -o gram.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gram-ex.c -o gram-ex.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c graphics.c -o graphics.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c grep.c -o grep.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c identical.c -o identical.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c inlined.c -o inlined.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c inspect.c -o inspect.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c internet.c -o internet.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c iosupport.c -o iosupport.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c lapack.c -o lapack.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c list.c -o list.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c localecharset.c -o localecharset.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c logic.c -o logic.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c main.c -o main.o | |
| [01m[Kmain.c:[m[K In function ‘[01m[Kdummy_ii[m[K’: | |
| [01m[Kmain.c:1656:12:[m[K [01;35m[Kwarning: [m[Kfunction returns address of local variable [[01;35m[K-Wreturn-local-addr[m[K] | |
| return [01;35m[K(uintptr_t) &ii[m[K; | |
| [01;35m[K^~~~~~~~~~~~~~~[m[K | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c mapply.c -o mapply.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c match.c -o match.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c memory.c -o memory.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c names.c -o names.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c objects.c -o objects.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c options.c -o options.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c paste.c -o paste.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c platform.c -o platform.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plot.c -o plot.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plot3d.c -o plot3d.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plotmath.c -o plotmath.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c print.c -o print.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printarray.c -o printarray.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printvector.c -o printvector.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printutils.c -o printutils.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c qsort.c -o qsort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c radixsort.c -o radixsort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c random.c -o random.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c raw.c -o raw.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c registration.c -o registration.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c relop.c -o relop.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlocale.c -o rlocale.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c saveload.c -o saveload.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c scan.c -o scan.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c seq.c -o seq.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c serialize.c -o serialize.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sort.c -o sort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c source.c -o source.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c split.c -o split.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sprintf.c -o sprintf.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c startup.c -o startup.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subassign.c -o subassign.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subscript.c -o subscript.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subset.c -o subset.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c summary.c -o summary.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sysutils.c -o sysutils.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c times.c -o times.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c unique.c -o unique.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c util.c -o util.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c version.c -o version.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_alab_her.c -o g_alab_her.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_cntrlify.c -o g_cntrlify.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_fontdb.c -o g_fontdb.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_her_glyph.c -o g_her_glyph.o | |
| f95 -fopenmp -g -O2 -c xxxpr.f -o xxxpr.o | |
| ar -cr libR.a CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o libs/*o | |
| ranlib libR.a | |
| gcc -Wl,--export-dynamic -fopenmp -L/usr/local/lib64 -o R.bin Rmain.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -L../../lib -lRblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n | |
| make[4]: Entering directory '/r-source/src/main' | |
| mkdir -p -- /r-source/bin/exec | |
| make[4]: Leaving directory '/r-source/src/main' | |
| make[3]: Leaving directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| making devX11.d from devX11.c | |
| making rotated.d from rotated.c | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| making Rhttpd.d from Rhttpd.c | |
| making Lapack.d from Lapack.c | |
| making rbitmap.d from rbitmap.c | |
| making Rsock.d from Rsock.c | |
| make[4]: Entering directory '/r-source/src/modules/lapack' | |
| f95 -fpic -g -O2 -ffloat-store -c dlamch.f -o dlamch.o | |
| making internet.d from internet.c | |
| making libcurl.d from libcurl.c | |
| f95 -fopenmp -fpic -g -O2 -c dlapack.f -o dlapack.o | |
| make[4]: Entering directory '/r-source/src/modules/X11' | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c devX11.c -o devX11.o | |
| making nanoftp.d from nanoftp.c | |
| making nanohttp.d from nanohttp.c | |
| making sock.d from sock.c | |
| making sockconn.d from sockconn.c | |
| f95 -fopenmp -fpic -g -O2 -c cmplx.f -o cmplx.o | |
| make[4]: Entering directory '/r-source/src/modules/internet' | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rsock.c -o Rsock.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c internet.c -o internet.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c libcurl.c -o libcurl.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rotated.c -o rotated.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanoftp.c -o nanoftp.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanohttp.c -o nanohttp.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rbitmap.c -o rbitmap.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sock.c -o sock.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dataentry.c -o dataentry.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sockconn.c -o sockconn.o | |
| gcc -shared -L/usr/local/lib64 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl | |
| make[5]: Entering directory '/r-source/src/modules/internet' | |
| mkdir -p -- /r-source/modules | |
| make[5]: Leaving directory '/r-source/src/modules/internet' | |
| make[4]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| gcc -shared -L/usr/local/lib64 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lm | |
| gcc -shared -L/usr/local/lib64 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lm | |
| make[4]: Leaving directory '/r-source/src/modules/X11' | |
| make[4]: Entering directory '/r-source/src/modules/X11' | |
| make[4]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| gcc -shared -fopenmp -L/usr/local/lib64 -o libRlapack.so dlamch.o dlapack.o cmplx.o -L../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[4]: Leaving directory '/r-source/src/modules/lapack' | |
| make[4]: Entering directory '/r-source/src/modules/lapack' | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Lapack.c -o Lapack.o | |
| gcc -shared -L/usr/local/lib64 -o lapack.so Lapack.o -L../../../lib -lRlapack -L../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[5]: Entering directory '/r-source/src/modules/lapack' | |
| /r-source/lib/libRlapack.so is unchanged | |
| make[5]: Leaving directory '/r-source/src/modules/lapack' | |
| make[4]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/library' | |
| mkdir -p -- ../../library | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| building system startup profile | |
| mkdir -p -- ../../../library/base/R | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| building package 'translations' | |
| mkdir -p -- ../../../library/translations | |
| make[4]: Entering directory '/r-source/src/library/translations' | |
| make[4]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| building package 'base' | |
| make[4]: Entering directory '/r-source/src/library/base' | |
| mkdir -p -- ../../../library/base/demo | |
| make[4]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| building package 'tools' | |
| mkdir -p -- ../../../library/tools | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| mkdir -p -- ../../../library/tools/R | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| make[5]: Entering directory '/r-source/src/library/tools/src' | |
| making text.d from text.c | |
| making init.d from init.c | |
| making md5.d from md5.c | |
| making Rmd5.d from Rmd5.c | |
| making signals.d from signals.c | |
| making getfmts.d from getfmts.c | |
| making http.d from http.c | |
| making install.d from install.c | |
| making gramLatex.d from gramLatex.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c text.c -o text.o | |
| making gramRd.d from gramRd.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c Rmd5.c -o Rmd5.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c md5.c -o md5.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c signals.c -o signals.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c install.c -o install.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getfmts.c -o getfmts.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c http.c -o http.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gramLatex.c -o gramLatex.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gramRd.c -o gramRd.o | |
| gcc -shared -L/usr/local/lib64 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o | |
| make[6]: Entering directory '/r-source/src/library/tools/src' | |
| mkdir -p -- ../../../../library/tools/libs | |
| make[6]: Leaving directory '/r-source/src/library/tools/src' | |
| make[5]: Leaving directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| installing 'sysdata.rda' | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| building package 'compiler' | |
| mkdir -p -- ../../../library/compiler | |
| make[4]: Entering directory '/r-source/src/library/compiler' | |
| mkdir -p -- ../../../library/compiler/R | |
| make[4]: Leaving directory '/r-source/src/library/compiler' | |
| make[4]: Entering directory '/r-source/src/library/compiler' | |
| byte-compiling package 'compiler' | |
| make[4]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| byte-compiling package 'base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| byte-compiling package 'tools' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| building package 'utils' | |
| mkdir -p -- ../../../library/utils | |
| mkdir -p -- ../../../library/utils/doc | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| mkdir -p -- ../../../library/utils/R | |
| mkdir -p -- ../../../library/utils/Sweave | |
| mkdir -p -- ../../../library/utils/misc | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| make[5]: Entering directory '/r-source/src/library/utils/src' | |
| making init.d from init.c | |
| making io.d from io.c | |
| making size.d from size.c | |
| making sock.d from sock.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making stubs.d from stubs.c | |
| making utils.d from utils.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c io.c -o io.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c sock.c -o sock.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stubs.c -o stubs.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o utils.so init.o io.o size.o sock.o stubs.o utils.o | |
| make[6]: Entering directory '/r-source/src/library/utils/src' | |
| mkdir -p -- ../../../../library/utils/libs | |
| make[6]: Leaving directory '/r-source/src/library/utils/src' | |
| make[5]: Leaving directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| installing 'sysdata.rda' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| byte-compiling package 'utils' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| building package 'grDevices' | |
| mkdir -p -- ../../../library/grDevices | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| mkdir -p -- ../../../library/grDevices/R | |
| mkdir -p -- ../../../library/grDevices/afm | |
| mkdir -p -- ../../../library/grDevices/enc | |
| mkdir -p -- ../../../library/grDevices/icc | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src' | |
| making axis_scales.d from axis_scales.c | |
| making chull.d from chull.c | |
| making devices.d from devices.c | |
| making init.d from init.c | |
| making stubs.d from stubs.c | |
| making colors.d from colors.c | |
| making devCairo.d from devCairo.c | |
| making devPicTeX.d from devPicTeX.c | |
| making devPS.d from devPS.c | |
| making devQuartz.d from devQuartz.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c axis_scales.c -o axis_scales.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c chull.c -o chull.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devices.c -o devices.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c stubs.c -o stubs.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c colors.c -o colors.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devCairo.c -o devCairo.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devPicTeX.c -o devPicTeX.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devPS.c -o devPS.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devQuartz.c -o devQuartz.o | |
| gcc -shared -L/usr/local/lib64 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz | |
| make[6]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[7]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| mkdir -p -- ../../../../library/grDevices/libs | |
| making cairoBM.d from cairoBM.c | |
| make[8]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[9]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c cairoBM.c -o cairoBM.o | |
| gcc -shared -L/usr/local/lib64 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lm | |
| make[9]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[8]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[7]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[6]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| byte-compiling package 'grDevices' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| building package 'graphics' | |
| mkdir -p -- ../../../library/graphics | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| mkdir -p -- ../../../library/graphics/R | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| make[5]: Entering directory '/r-source/src/library/graphics/src' | |
| making init.d from init.c | |
| making base.d from base.c | |
| making graphics.d from graphics.c | |
| making par.d from par.c | |
| making plot.d from plot.c | |
| making plot3d.d from plot3d.c | |
| making stem.d from stem.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base.c -o base.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c graphics.c -o graphics.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c par.c -o par.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c plot.c -o plot.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c plot3d.c -o plot3d.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stem.c -o stem.o | |
| gcc -shared -L/usr/local/lib64 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o | |
| make[6]: Entering directory '/r-source/src/library/graphics/src' | |
| mkdir -p -- ../../../../library/graphics/libs | |
| make[6]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[5]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| byte-compiling package 'graphics' | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| building package 'stats' | |
| mkdir -p -- ../../../library/stats | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| mkdir -p -- ../../../library/stats/R | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| make[5]: Entering directory '/r-source/src/library/stats/src' | |
| making init.d from init.c | |
| making kmeans.d from kmeans.c | |
| making ansari.d from ansari.c | |
| making bandwidths.d from bandwidths.c | |
| making chisqsim.d from chisqsim.c | |
| making d2x2xk.d from d2x2xk.c | |
| making kendall.d from kendall.c | |
| making fexact.d from fexact.c | |
| making ks.d from ks.c | |
| making smooth.d from smooth.c | |
| making line.d from line.c | |
| making prho.d from prho.c | |
| making swilk.d from swilk.c | |
| making ksmooth.d from ksmooth.c | |
| making loessc.d from loessc.c | |
| making monoSpl.d from monoSpl.c | |
| making isoreg.d from isoreg.c | |
| making Srunmed.d from Srunmed.c | |
| making dblcen.d from dblcen.c | |
| making distance.d from distance.c | |
| making hclust-utils.d from hclust-utils.c | |
| making nls.d from nls.c | |
| making rWishart.d from rWishart.c | |
| making HoltWinters.d from HoltWinters.c | |
| making PPsum.d from PPsum.c | |
| making arima.d from arima.c | |
| making burg.d from burg.c | |
| making filter.d from filter.c | |
| making mAR.d from mAR.c | |
| making pacf.d from pacf.c | |
| making starma.d from starma.c | |
| making port.d from port.c | |
| making family.d from family.c | |
| making sbart.d from sbart.c | |
| making approx.d from approx.c | |
| making lowess.d from lowess.c | |
| making loglin.d from loglin.c | |
| making massdist.d from massdist.c | |
| making splines.d from splines.c | |
| making lm.d from lm.c | |
| making complete_cases.d from complete_cases.c | |
| making cov.d from cov.c | |
| making deriv.d from deriv.c | |
| making fft.d from fft.c | |
| making fourier.d from fourier.c | |
| making model.d from model.c | |
| making optim.d from optim.c | |
| making optimize.d from optimize.c | |
| making integrate.d from integrate.c | |
| making random.d from random.c | |
| making distn.d from distn.c | |
| making zeroin.d from zeroin.c | |
| making rcont.d from rcont.c | |
| making influence.d from influence.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c kmeans.c -o kmeans.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ansari.c -o ansari.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c bandwidths.c -o bandwidths.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c chisqsim.c -o chisqsim.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c d2x2xk.c -o d2x2xk.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fexact.c -o fexact.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c kendall.c -o kendall.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ks.c -o ks.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c line.c -o line.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c smooth.c -o smooth.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c prho.c -o prho.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c swilk.c -o swilk.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ksmooth.c -o ksmooth.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c loessc.c -o loessc.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c monoSpl.c -o monoSpl.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c isoreg.c -o isoreg.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c Srunmed.c -o Srunmed.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c dblcen.c -o dblcen.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c distance.c -o distance.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c hclust-utils.c -o hclust-utils.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c nls.c -o nls.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c rWishart.c -o rWishart.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c HoltWinters.c -o HoltWinters.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c PPsum.c -o PPsum.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c arima.c -o arima.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c burg.c -o burg.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c filter.c -o filter.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c mAR.c -o mAR.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c pacf.c -o pacf.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c starma.c -o starma.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c port.c -o port.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c family.c -o family.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c sbart.c -o sbart.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c approx.c -o approx.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c loglin.c -o loglin.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c lowess.c -o lowess.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c massdist.c -o massdist.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c splines.c -o splines.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c lm.c -o lm.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c complete_cases.c -o complete_cases.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c cov.c -o cov.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c deriv.c -o deriv.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fft.c -o fft.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fourier.c -o fourier.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c model.c -o model.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c optim.c -o optim.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c optimize.c -o optimize.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c integrate.c -o integrate.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c random.c -o random.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c distn.c -o distn.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c zeroin.c -o zeroin.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c rcont.c -o rcont.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c influence.c -o influence.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bsplvd.f -o bsplvd.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bvalue.f -o bvalue.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bvalus.f -o bvalus.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c loessf.f -o loessf.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c ppr.f -o ppr.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c qsbart.f -o qsbart.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sgram.f -o sgram.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sinerp.f -o sinerp.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sslvrg.f -o sslvrg.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c stxwx.f -o stxwx.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c hclust.f -o hclust.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c kmns.f -o kmns.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c eureka.f -o eureka.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c stl.f -o stl.o | |
| f95 -fpic -g -O2 -ffloat-store -c portsrc.f -o portsrc.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c lminfl.f -o lminfl.o | |
| gcc -shared -L/usr/local/lib64 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -L../../../../lib -lRlapack -L../../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[6]: Entering directory '/r-source/src/library/stats/src' | |
| mkdir -p -- ../../../../library/stats/libs | |
| make[6]: Leaving directory '/r-source/src/library/stats/src' | |
| make[5]: Leaving directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| byte-compiling package 'stats' | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| building package 'datasets' | |
| mkdir -p -- ../../../library/datasets | |
| make[4]: Entering directory '/r-source/src/library/datasets' | |
| make[4]: Leaving directory '/r-source/src/library/datasets' | |
| mkdir -p -- ../../../library/datasets/data | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| building package 'methods' | |
| mkdir -p -- ../../../library/methods | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| mkdir -p -- ../../../library/methods/R | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| make[5]: Entering directory '/r-source/src/library/methods/src' | |
| making do_substitute_direct.d from do_substitute_direct.c | |
| making methods_list_dispatch.d from methods_list_dispatch.c | |
| making init.d from init.c | |
| making slot.d from slot.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c do_substitute_direct.c -o do_substitute_direct.o | |
| making tests.d from tests.c | |
| making class_support.d from class_support.c | |
| making utils.d from utils.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c methods_list_dispatch.c -o methods_list_dispatch.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slot.c -o slot.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c class_support.c -o class_support.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tests.c -o tests.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o | |
| make[6]: Entering directory '/r-source/src/library/methods/src' | |
| mkdir -p -- ../../../../library/methods/libs | |
| make[6]: Leaving directory '/r-source/src/library/methods/src' | |
| make[5]: Leaving directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| byte-compiling 'methods' | |
| initializing class and method definitions ... done | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| building package 'grid' | |
| mkdir -p -- ../../../library/grid | |
| mkdir -p -- ../../../library/grid/doc | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| mkdir -p -- ../../../library/grid/R | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| make[5]: Entering directory '/r-source/src/library/grid/src' | |
| making gpar.d from gpar.c | |
| making grid.d from grid.c | |
| making just.d from just.c | |
| making layout.d from layout.c | |
| making matrix.d from matrix.c | |
| making register.d from register.c | |
| making state.d from state.c | |
| making unit.d from unit.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gpar.c -o gpar.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c grid.c -o grid.o | |
| making util.d from util.c | |
| making viewport.d from viewport.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c just.c -o just.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c layout.c -o layout.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c matrix.c -o matrix.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c state.c -o state.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unit.c -o unit.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c util.c -o util.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c viewport.c -o viewport.o | |
| gcc -shared -L/usr/local/lib64 -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o | |
| make[6]: Entering directory '/r-source/src/library/grid/src' | |
| mkdir -p -- ../../../../library/grid/libs | |
| make[6]: Leaving directory '/r-source/src/library/grid/src' | |
| make[5]: Leaving directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| byte-compiling package 'grid' | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| building package 'splines' | |
| mkdir -p -- ../../../library/splines | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| mkdir -p -- ../../../library/splines/R | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| make[5]: Entering directory '/r-source/src/library/splines/src' | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c splines.c -o splines.o | |
| making splines.d from splines.c | |
| gcc -shared -L/usr/local/lib64 -o splines.so splines.o | |
| make[6]: Entering directory '/r-source/src/library/splines/src' | |
| mkdir -p -- ../../../../library/splines/libs | |
| make[6]: Leaving directory '/r-source/src/library/splines/src' | |
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| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| byte-compiling package 'splines' | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| building package 'stats4' | |
| mkdir -p -- ../../../library/stats4 | |
| make[4]: Entering directory '/r-source/src/library/stats4' | |
| mkdir -p -- ../../../library/stats4/R | |
| make[4]: Leaving directory '/r-source/src/library/stats4' | |
| make[4]: Entering directory '/r-source/src/library/stats4' | |
| byte-compiling package 'stats4' | |
| make[4]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| building package 'tcltk' | |
| mkdir -p -- ../../../library/tcltk/R | |
| make[4]: Entering directory '/r-source/src/library/tcltk' | |
| mkdir -p -- ../../../library/tcltk/exec | |
| make[4]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| building package 'parallel' | |
| mkdir -p -- ../../../library/parallel | |
| mkdir -p -- ../../../library/parallel/doc | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| mkdir -p -- ../../../library/parallel/R | |
| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| make[5]: Entering directory '/r-source/src/library/parallel/src' | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making init.d from init.c | |
| making rngstream.d from rngstream.c | |
| making fork.d from fork.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rngstream.c -o rngstream.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fork.c -o fork.o | |
| gcc -shared -L/usr/local/lib64 -o parallel.so init.o rngstream.o fork.o | |
| make[6]: Entering directory '/r-source/src/library/parallel/src' | |
| mkdir -p -- ../../../../library/parallel/libs | |
| make[6]: Leaving directory '/r-source/src/library/parallel/src' | |
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| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| byte-compiling package 'parallel' | |
| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| installing parsed NAMESPACE files | |
| make[2]: Leaving directory '/r-source/src/library' | |
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| make[1]: Entering directory '/r-source/tests' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/tests' | |
| you should 'make docs' now ... | |
| make[1]: Entering directory '/r-source' | |
| make[1]: Entering directory '/r-source/doc' | |
| configuring Java ... | |
| Java interpreter : /usr/bin/java | |
| Java version : 1.8.0_121 | |
| Java home path : /usr/lib/jvm/java-8-openjdk-amd64/jre | |
| Java compiler : /usr/bin/javac | |
| Java headers gen.: /usr/bin/javah | |
| Java archive tool: /usr/bin/jar | |
| trying to compile and link a JNI program | |
| detected JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux | |
| detected JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm | |
| make[2]: Entering directory '/tmp/Rjavareconf.Rw1IdB' | |
| gcc -I/r-source/include -DNDEBUG -I/usr/lib/jvm/java-8-openjdk-amd64/jre/../include -I/usr/lib/jvm/java-8-openjdk-amd64/jre/../include/linux -I/usr/local/include -fpic -g -O2 -c conftest.c -o conftest.o | |
| gcc -shared -L/usr/local/lib64 -o conftest.so conftest.o -L/usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server -ljvm | |
| make[2]: Leaving directory '/tmp/Rjavareconf.Rw1IdB' | |
| JAVA_HOME : /usr/lib/jvm/java-8-openjdk-amd64/jre | |
| Java library path: $(JAVA_HOME)/lib/amd64/server | |
| JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux | |
| JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm | |
| Updating Java configuration in /r-source | |
| Done. | |
| make[1]: Leaving directory '/r-source' | |
| creating NEWS | |
| creating NEWS.pdf | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| creating doc/manual/R-FAQ.html | |
| creating doc/manual/version.texi | |
| creating doc/manual/R-admin.html | |
| creating doc/manual/R-data.html | |
| creating doc/manual/R-exts.html | |
| creating doc/manual/R-intro.html | |
| creating doc/manual/R-ints.html | |
| creating doc/manual/R-lang.html | |
| make[3]: Entering directory '/r-source/doc/html' | |
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| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/library' | |
| installing parsed Rd | |
| make[3]: Entering directory '/r-source/src/library' | |
| methods | |
| utils | |
| graphics | |
| grDevices | |
| datasets | |
| grid | |
| tcltk | |
| tools | |
| splines | |
| stats4 | |
| compiler | |
| parallel | |
| stats | |
| base | |
| make[3]: Leaving directory '/r-source/src/library' | |
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| building/updating package metadata ... | |
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| writing package indices | |
| make[3]: Entering directory '/r-source/src/library' | |
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| make[1]: Nothing to be done for 'all'. | |
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| make[1]: Entering directory '/r-source/src/library' | |
| building/updating vignettes for package 'grid' ... | |
| processing 'displaylist.Rnw' | |
| processing 'frame.Rnw' | |
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| building/updating vignettes for package 'parallel' ... | |
| processing 'parallel.Rnw' | |
| building/updating vignettes for package 'utils' ... | |
| processing 'Sweave.Rnw' | |
| make[1]: Leaving directory '/r-source/src/library' | |
| mkdir -p -- /usr/local/lib64/R | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'install'. | |
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| make[1]: Entering directory '/r-source/doc' | |
| installing doc ... | |
| mkdir -p -- /usr/local/lib64/R/doc | |
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| installing doc/html ... | |
| mkdir -p -- /usr/local/lib64/R/doc/html | |
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| make[2]: Entering directory '/r-source/doc/manual' | |
| installing doc/manual ... | |
| mkdir -p -- /usr/local/lib64/R/doc/manual | |
| mkdir -p -- /usr/local/lib64/R/doc/manual/images | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
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| make[1]: Entering directory '/r-source/etc' | |
| mkdir -p -- /usr/local/lib64/R/etc | |
| installing etc ... | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/share' | |
| installing share ... | |
| mkdir -p -- /usr/local/lib64/R/share | |
| mkdir -p -- /usr/local/lib64/R/share/R | |
| mkdir -p -- /usr/local/lib64/R/share/dictionaries | |
| mkdir -p -- /usr/local/lib64/R/share/encodings | |
| mkdir -p -- /usr/local/lib64/R/share/java | |
| mkdir -p -- /usr/local/lib64/R/share/licenses | |
| mkdir -p -- /usr/local/lib64/R/share/make | |
| mkdir -p -- /usr/local/lib64/R/share/Rd | |
| mkdir -p -- /usr/local/lib64/R/share/Rd/macros | |
| mkdir -p -- /usr/local/lib64/R/share/sh | |
| mkdir -p -- /usr/local/lib64/R/share/texmf | |
| mkdir -p -- /usr/local/lib64/R/share/texmf/bibtex/bib | |
| mkdir -p -- /usr/local/lib64/R/share/texmf/bibtex/bst | |
| mkdir -p -- /usr/local/lib64/R/share/texmf/tex/latex | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| mkdir -p -- /usr/local/lib64/R/bin | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Entering directory '/r-source/src/include' | |
| mkdir -p -- /usr/local/lib64/R/include | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| mkdir -p -- /usr/local/lib64/R/include/R_ext | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| mkdir -p -- /usr/local/lib64/R/lib | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Nothing to be done for 'install'. | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Nothing to be done for 'install'. | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Nothing to be done for 'install'. | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Nothing to be done for 'install'. | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[2]: Nothing to be done for 'install'. | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib64 -DR_HOME='"/usr/local/lib64/R"' \ | |
| -o Rscript ./Rscript.c | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/main' | |
| mkdir -p -- /usr/local/lib64/R/bin/exec | |
| make[3]: Entering directory '/r-source/src/main' | |
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| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| mkdir -p -- /usr/local/lib64/R/modules | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
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| make[3]: Entering directory '/r-source/src/modules/X11' | |
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| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/library' | |
| mkdir -p -- /usr/local/lib64/R/library | |
| installing packages ... | |
| building HTML index ... | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[1]: Leaving directory '/r-source/src' | |
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| make[1]: Nothing to be done for 'install'. | |
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| make[2]: Entering directory '/r-source/tests/Embedding' | |
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| make[3]: Entering directory '/r-source/src/library/stats4' | |
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| make[3]: Entering directory '/r-source/src/library/splines' | |
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| make[3]: Entering directory '/r-source/src/library/datasets' | |
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| make[3]: Entering directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
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| make[3]: Entering directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
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| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
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| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
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| make[3]: Entering directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| make[3]: Nothing to be done for 'clean'. | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/include' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'clean'. | |
| make[1]: Leaving directory '/r-source/m4' | |
| make[1]: Entering directory '/r-source/tests' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
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| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
| make[2]: Leaving directory '/r-source/tests/Embedding' | |
| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[1]: Leaving directory '/r-source/tests' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/library' | |
| make[3]: Entering directory '/r-source/src/library/Recommended' | |
| make[3]: Leaving directory '/r-source/src/library/Recommended' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[3]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/main' | |
| (cd ../include; make Rversion.h) | |
| make[3]: Entering directory '/r-source/src/include' | |
| make[3]: Leaving directory '/r-source/src/include' | |
| config.status: creating src/main/Makefile | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| config.status: creating src/unix/Makefile | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/include' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Leaving directory '/r-source/m4' | |
| R Under development (unstable) (2016-03-16 r70335) -- "Unsuffered Consequences" | |
| Copyright (C) 2016 The R Foundation for Statistical Computing | |
| Platform: x86_64-pc-linux-gnu (64-bit) | |
| R is free software and comes with ABSOLUTELY NO WARRANTY. | |
| You are welcome to redistribute it under certain conditions. | |
| Type 'license()' or 'licence()' for distribution details. | |
| Natural language support but running in an English locale | |
| R is a collaborative project with many contributors. | |
| Type 'contributors()' for more information and | |
| 'citation()' on how to cite R or R packages in publications. | |
| Type 'demo()' for some demos, 'help()' for on-line help, or | |
| 'help.start()' for an HTML browser interface to help. | |
| Type 'q()' to quit R. | |
| > install.packages(c('devtools', 'roxygen2', 'testthat', 'Rcpp', 'knitr', 'rmarkdown', 'dplyr', 'RMySQL', 'RSQLite', 'RPostgreSQL'), repos = c(CRAN='https://cloud.r-project.org'), Ncpus=4) | |
| also installing the dependencies ‘mime’, ‘curl’, ‘openssl’, ‘bitops’, ‘backports’, ‘httr’, ‘memoise’, ‘whisker’, ‘digest’, ‘rstudioapi’, ‘jsonlite’, ‘git2r’, ‘withr’, ‘stringr’, ‘stringi’, ‘brew’, ‘R6’, ‘desc’, ‘commonmark’, ‘xml2’, ‘crayon’, ‘praise’, ‘magrittr’, ‘evaluate’, ‘highr’, ‘markdown’, ‘yaml’, ‘htmltools’, ‘caTools’, ‘base64enc’, ‘rprojroot’, ‘assertthat’, ‘tibble’, ‘lazyeval’, ‘DBI’, ‘BH’, ‘plogr’ | |
| trying URL 'https://cloud.r-project.org/src/contrib/mime_0.5.tar.gz' | |
| Content type 'application/x-gzip' length 12634 bytes (12 KB) | |
| ================================================== | |
| downloaded 12 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/curl_2.4.tar.gz' | |
| Content type 'application/x-gzip' length 403058 bytes (393 KB) | |
| ================================================== | |
| downloaded 393 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/openssl_0.9.6.tar.gz' | |
| Content type 'application/x-gzip' length 1239339 bytes (1.2 MB) | |
| ================================================== | |
| downloaded 1.2 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/bitops_1.0-6.tar.gz' | |
| Content type 'application/x-gzip' length 8734 bytes | |
| ================================================== | |
| downloaded 8734 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/backports_1.0.5.tar.gz' | |
| Content type 'application/x-gzip' length 6869 bytes | |
| ================================================== | |
| downloaded 6869 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/httr_1.2.1.tar.gz' | |
| Content type 'application/x-gzip' length 133398 bytes (130 KB) | |
| ================================================== | |
| downloaded 130 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/memoise_1.0.0.tar.gz' | |
| Content type 'application/x-gzip' length 7931 bytes | |
| ================================================== | |
| downloaded 7931 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/whisker_0.3-2.tar.gz' | |
| Content type 'application/x-gzip' length 27707 bytes (27 KB) | |
| ================================================== | |
| downloaded 27 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/digest_0.6.12.tar.gz' | |
| Content type 'application/x-gzip' length 120337 bytes (117 KB) | |
| ================================================== | |
| downloaded 117 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/rstudioapi_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 12024 bytes (11 KB) | |
| ================================================== | |
| downloaded 11 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/jsonlite_1.3.tar.gz' | |
| Content type 'application/x-gzip' length 1060613 bytes (1.0 MB) | |
| ================================================== | |
| downloaded 1.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/git2r_0.18.0.tar.gz' | |
| Content type 'application/x-gzip' length 1122935 bytes (1.1 MB) | |
| ================================================== | |
| downloaded 1.1 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/withr_1.0.2.tar.gz' | |
| Content type 'application/x-gzip' length 11976 bytes (11 KB) | |
| ================================================== | |
| downloaded 11 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/stringr_1.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 94095 bytes (91 KB) | |
| ================================================== | |
| downloaded 91 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/stringi_1.1.3.tar.gz' | |
| Content type 'application/x-gzip' length 3644529 bytes (3.5 MB) | |
| ================================================== | |
| downloaded 3.5 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/brew_1.0-6.tar.gz' | |
| Content type 'application/x-gzip' length 83315 bytes (81 KB) | |
| ================================================== | |
| downloaded 81 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/R6_2.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 203498 bytes (198 KB) | |
| ================================================== | |
| downloaded 198 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/desc_1.1.0.tar.gz' | |
| Content type 'application/x-gzip' length 59568 bytes (58 KB) | |
| ================================================== | |
| downloaded 58 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/commonmark_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 124270 bytes (121 KB) | |
| ================================================== | |
| downloaded 121 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/xml2_1.1.1.tar.gz' | |
| Content type 'application/x-gzip' length 244643 bytes (238 KB) | |
| ================================================== | |
| downloaded 238 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/crayon_1.3.2.tar.gz' | |
| Content type 'application/x-gzip' length 656168 bytes (640 KB) | |
| ================================================== | |
| downloaded 640 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/praise_1.0.0.tar.gz' | |
| Content type 'application/x-gzip' length 6100 bytes | |
| ================================================== | |
| downloaded 6100 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/magrittr_1.5.tar.gz' | |
| Content type 'application/x-gzip' length 200504 bytes (195 KB) | |
| ================================================== | |
| downloaded 195 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/evaluate_0.10.tar.gz' | |
| Content type 'application/x-gzip' length 21914 bytes (21 KB) | |
| ================================================== | |
| downloaded 21 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/highr_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 17294 bytes (16 KB) | |
| ================================================== | |
| downloaded 16 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/markdown_0.7.7.tar.gz' | |
| Content type 'application/x-gzip' length 79427 bytes (77 KB) | |
| ================================================== | |
| downloaded 77 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/yaml_2.1.14.tar.gz' | |
| Content type 'application/x-gzip' length 81095 bytes (79 KB) | |
| ================================================== | |
| downloaded 79 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/htmltools_0.3.5.tar.gz' | |
| Content type 'application/x-gzip' length 44048 bytes (43 KB) | |
| ================================================== | |
| downloaded 43 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/caTools_1.17.1.tar.gz' | |
| Content type 'application/x-gzip' length 63358 bytes (61 KB) | |
| ================================================== | |
| downloaded 61 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/base64enc_0.1-3.tar.gz' | |
| Content type 'application/x-gzip' length 7833 bytes | |
| ================================================== | |
| downloaded 7833 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/rprojroot_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 42063 bytes (41 KB) | |
| ================================================== | |
| downloaded 41 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/assertthat_0.1.tar.gz' | |
| Content type 'application/x-gzip' length 10187 bytes | |
| ================================================== | |
| downloaded 10187 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/tibble_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 54517 bytes (53 KB) | |
| ================================================== | |
| downloaded 53 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/lazyeval_0.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 317272 bytes (309 KB) | |
| ================================================== | |
| downloaded 309 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/DBI_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 611282 bytes (596 KB) | |
| ================================================== | |
| downloaded 596 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/BH_1.62.0-1.tar.gz' | |
| Content type 'application/x-gzip' length 10181096 bytes (9.7 MB) | |
| ================================================== | |
| downloaded 9.7 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/plogr_0.1-1.tar.gz' | |
| Content type 'application/x-gzip' length 7421 bytes | |
| ================================================== | |
| downloaded 7421 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/devtools_1.12.0.tar.gz' | |
| Content type 'application/x-gzip' length 466618 bytes (455 KB) | |
| ================================================== | |
| downloaded 455 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/roxygen2_6.0.1.tar.gz' | |
| Content type 'application/x-gzip' length 150580 bytes (147 KB) | |
| ================================================== | |
| downloaded 147 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/testthat_1.0.2.tar.gz' | |
| Content type 'application/x-gzip' length 147298 bytes (143 KB) | |
| ================================================== | |
| downloaded 143 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/Rcpp_0.12.10.tar.gz' | |
| Content type 'application/x-gzip' length 2446049 bytes (2.3 MB) | |
| ================================================== | |
| downloaded 2.3 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/knitr_1.15.1.tar.gz' | |
| Content type 'application/x-gzip' length 1027808 bytes (1003 KB) | |
| ================================================== | |
| downloaded 1003 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/rmarkdown_1.4.tar.gz' | |
| Content type 'application/x-gzip' length 2077472 bytes (2.0 MB) | |
| ================================================== | |
| downloaded 2.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/dplyr_0.5.0.tar.gz' | |
| Content type 'application/x-gzip' length 708476 bytes (691 KB) | |
| ================================================== | |
| downloaded 691 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RMySQL_0.10.11.tar.gz' | |
| Content type 'application/x-gzip' length 54186 bytes (52 KB) | |
| ================================================== | |
| downloaded 52 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RSQLite_1.1-2.tar.gz' | |
| Content type 'application/x-gzip' length 2108699 bytes (2.0 MB) | |
| ================================================== | |
| downloaded 2.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RPostgreSQL_0.4-1.tar.gz' | |
| Content type 'application/x-gzip' length 476204 bytes (465 KB) | |
| ================================================== | |
| downloaded 465 KB | |
| begin installing package ‘mime’ | |
| begin installing package ‘curl’ | |
| begin installing package ‘openssl’ | |
| begin installing package ‘bitops’ | |
| * installing *source* package ‘mime’ ... | |
| ** package ‘mime’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpGGl7ts/R.INSTALL5b0338d5d27d/mime/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o | |
| gcc -shared -L/usr/local/lib64 -o mime.so rawmatch.o | |
| make[1]: Leaving directory '/tmp/RtmpGGl7ts/R.INSTALL5b0338d5d27d/mime/src' | |
| installing to /usr/local/lib64/R/library/mime/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (mime) | |
| begin installing package ‘backports’ | |
| * installing *source* package ‘bitops’ ... | |
| ** package ‘bitops’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpkqJZos/R.INSTALL5b054aa75a4f/bitops/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o | |
| gcc -shared -L/usr/local/lib64 -o bitops.so bit-ops.o cksum.o | |
| make[1]: Leaving directory '/tmp/RtmpkqJZos/R.INSTALL5b054aa75a4f/bitops/src' | |
| installing to /usr/local/lib64/R/library/bitops/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (bitops) | |
| begin installing package ‘whisker’ | |
| * installing *source* package ‘backports’ ... | |
| ** package ‘backports’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (backports) | |
| begin installing package ‘digest’ | |
| * installing *source* package ‘whisker’ ... | |
| ** package ‘whisker’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (whisker) | |
| begin installing package ‘rstudioapi’ | |
| * installing *source* package ‘rstudioapi’ ... | |
| ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (rstudioapi) | |
| begin installing package ‘jsonlite’ | |
| * installing *source* package ‘curl’ ... | |
| ** package ‘curl’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu | |
| Using PKG_LIBS=-lcurl | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpvHb0Fs/R.INSTALL5aff78f76a9d/curl/src' | |
| rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c callbacks.c -o callbacks.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c curl.c -o curl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c download.c -o download.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c escape.c -o escape.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c fetch.c -o fetch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c form.c -o form.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c getdate.c -o getdate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c handle.c -o handle.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c ieproxy.c -o ieproxy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c interrupt.c -o interrupt.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c multi.c -o multi.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c nslookup.c -o nslookup.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c reflist.c -o reflist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c version.c -o version.o | |
| gcc -shared -L/usr/local/lib64 -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o -lcurl | |
| make[1]: Leaving directory '/tmp/RtmpvHb0Fs/R.INSTALL5aff78f76a9d/curl/src' | |
| installing to /usr/local/lib64/R/library/curl/libs | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (curl) | |
| begin installing package ‘git2r’ | |
| * installing *source* package ‘openssl’ ... | |
| ** package ‘openssl’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS= | |
| Using PKG_LIBS=-lssl -lcrypto | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp4usSJv/R.INSTALL5b0155e639b6/openssl/src' | |
| rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o openssl.so | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o | |
| gcc -shared -L/usr/local/lib64 -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o -lssl -lcrypto | |
| make[1]: Leaving directory '/tmp/Rtmp4usSJv/R.INSTALL5b0155e639b6/openssl/src' | |
| installing to /usr/local/lib64/R/library/openssl/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (openssl) | |
| begin installing package ‘withr’ | |
| * installing *source* package ‘digest’ ... | |
| ** package ‘digest’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpAWBzfA/R.INSTALL5c046fa63053/digest/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o | |
| gcc -shared -L/usr/local/lib64 -o digest.so aes.o crc32.o digest.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o xxhash.o | |
| make[1]: Leaving directory '/tmp/RtmpAWBzfA/R.INSTALL5c046fa63053/digest/src' | |
| installing to /usr/local/lib64/R/library/digest/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (digest) | |
| begin installing package ‘stringi’ | |
| * installing *source* package ‘withr’ ... | |
| ** package ‘withr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (withr) | |
| begin installing package ‘brew’ | |
| * installing *source* package ‘brew’ ... | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (brew) | |
| begin installing package ‘R6’ | |
| Makefile:50: recipe for target 'jsonlite.ts' failed | |
| make: *** [jsonlite.ts] Error 1 | |
| begin installing package ‘commonmark’ | |
| * installing *source* package ‘R6’ ... | |
| ** package ‘R6’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (R6) | |
| begin installing package ‘crayon’ | |
| * installing *source* package ‘crayon’ ... | |
| ** package ‘crayon’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (crayon) | |
| begin installing package ‘praise’ | |
| * installing *source* package ‘praise’ ... | |
| ** package ‘praise’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (praise) | |
| begin installing package ‘magrittr’ | |
| * installing *source* package ‘magrittr’ ... | |
| ** package ‘magrittr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (magrittr) | |
| begin installing package ‘highr’ | |
| * installing *source* package ‘highr’ ... | |
| ** package ‘highr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (highr) | |
| begin installing package ‘yaml’ | |
| * installing *source* package ‘yaml’ ... | |
| ** package ‘yaml’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpnCvT9R/R.INSTALL656f2b6f93d5/yaml/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r-ext.c -o r-ext.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o | |
| gcc -shared -L/usr/local/lib64 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r-ext.o reader.o scanner.o writer.o | |
| make[1]: Leaving directory '/tmp/RtmpnCvT9R/R.INSTALL656f2b6f93d5/yaml/src' | |
| installing to /usr/local/lib64/R/library/yaml/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (yaml) | |
| begin installing package ‘base64enc’ | |
| * installing *source* package ‘commonmark’ ... | |
| ** package ‘commonmark’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpdUZDzL/R.INSTALL60ba4b7f022d/commonmark/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions.c -o extensions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c wrapper.c -o wrapper.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/node.c -o cmark/node.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/references.c -o cmark/references.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/render.c -o cmark/render.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/man.c -o cmark/man.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/html.c -o cmark/html.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/table.c -o extensions/table.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o | |
| ar rcs libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o | |
| gcc -shared -L/usr/local/lib64 -o commonmark.so extensions.o wrapper.o -L. -lstatcmark | |
| make[1]: Leaving directory '/tmp/RtmpdUZDzL/R.INSTALL60ba4b7f022d/commonmark/src' | |
| installing to /usr/local/lib64/R/library/commonmark/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (commonmark) | |
| begin installing package ‘assertthat’ | |
| * installing *source* package ‘assertthat’ ... | |
| ** package ‘assertthat’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (assertthat) | |
| begin installing package ‘lazyeval’ | |
| * installing *source* package ‘base64enc’ ... | |
| ** package ‘base64enc’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmphlhe7L/R.INSTALL6742adca036/base64enc/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o | |
| gcc -shared -L/usr/local/lib64 -o base64enc.so base64.o uriencode.o utf8.o | |
| make[1]: Leaving directory '/tmp/Rtmphlhe7L/R.INSTALL6742adca036/base64enc/src' | |
| installing to /usr/local/lib64/R/library/base64enc/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (base64enc) | |
| begin installing package ‘DBI’ | |
| * installing *source* package ‘lazyeval’ ... | |
| ** package ‘lazyeval’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpZza9sb/R.INSTALL677f9bcab8/lazyeval/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o lazyeval.so expr.o interp.o lazy.o name.o utils.o | |
| make[1]: Leaving directory '/tmp/RtmpZza9sb/R.INSTALL677f9bcab8/lazyeval/src' | |
| installing to /usr/local/lib64/R/library/lazyeval/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (lazyeval) | |
| begin installing package ‘BH’ | |
| * installing *source* package ‘DBI’ ... | |
| ** package ‘DBI’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (DBI) | |
| begin installing package ‘plogr’ | |
| * installing *source* package ‘plogr’ ... | |
| ** package ‘plogr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (plogr) | |
| begin installing package ‘Rcpp’ | |
| * installing *source* package ‘BH’ ... | |
| ** package ‘BH’ successfully unpacked and MD5 sums checked | |
| ** inst | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (BH) | |
| begin installing package ‘memoise’ | |
| * installing *source* package ‘memoise’ ... | |
| ** package ‘memoise’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (memoise) | |
| begin installing package ‘markdown’ | |
| * installing *source* package ‘markdown’ ... | |
| ** package ‘markdown’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpK4YEe4/R.INSTALL690f116f5e50/markdown/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o | |
| gcc -shared -L/usr/local/lib64 -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o | |
| make[1]: Leaving directory '/tmp/RtmpK4YEe4/R.INSTALL690f116f5e50/markdown/src' | |
| installing to /usr/local/lib64/R/library/markdown/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (markdown) | |
| begin installing package ‘caTools’ | |
| * installing *source* package ‘caTools’ ... | |
| ** package ‘caTools’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp66Bgdh/R.INSTALL697154ae9b90/caTools/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Gif2R.cpp -o Gif2R.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c GifTools.cpp -o GifTools.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c runfunc.c -o runfunc.o | |
| g++ -shared -L/usr/local/lib64 -o caTools.so Gif2R.o GifTools.o runfunc.o | |
| make[1]: Leaving directory '/tmp/Rtmp66Bgdh/R.INSTALL697154ae9b90/caTools/src' | |
| installing to /usr/local/lib64/R/library/caTools/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (caTools) | |
| begin installing package ‘rprojroot’ | |
| * installing *source* package ‘rprojroot’ ... | |
| ** package ‘rprojroot’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (rprojroot) | |
| begin installing package ‘testthat’ | |
| * installing *source* package ‘Rcpp’ ... | |
| ** package ‘Rcpp’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp8MZsaW/R.INSTALL67f97d4fae65/Rcpp/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c Date.cpp -o Date.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c Module.cpp -o Module.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c Rcpp_init.cpp -o Rcpp_init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c api.cpp -o api.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c attributes.cpp -o attributes.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -g -O2 -c barrier.cpp -o barrier.o | |
| g++ -shared -L/usr/local/lib64 -o Rcpp.so Date.o Module.o Rcpp_init.o api.o attributes.o barrier.o | |
| make[1]: Leaving directory '/tmp/Rtmp8MZsaW/R.INSTALL67f97d4fae65/Rcpp/src' | |
| installing to /usr/local/lib64/R/library/Rcpp/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| code for methods in class “C++OverloadedMethods” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| code for methods in class “RcppClass” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| code for methods in class “RcppClass” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (Rcpp) | |
| begin installing package ‘RMySQL’ | |
| * installing *source* package ‘RMySQL’ ... | |
| ** package ‘RMySQL’ successfully unpacked and MD5 sums checked | |
| Found mysql_config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/mysql | |
| Using PKG_LIBS=-L/usr/lib/x86_64-linux-gnu -lmariadbclient -lpthread -lz -lm -ldl | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp6DBq2T/R.INSTALL6a8581ee3d4/RMySQL/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c RMySQL-init.c -o RMySQL-init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c connection.c -o connection.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c db-apply.c -o db-apply.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c driver.c -o driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c exception.c -o exception.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c fields.c -o fields.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c result.c -o result.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o RMySQL.so RMySQL-init.o connection.o db-apply.o driver.o exception.o fields.o result.o utils.o -L/usr/lib/x86_64-linux-gnu -lmariadbclient -lpthread -lz -lm -ldl | |
| make[1]: Leaving directory '/tmp/Rtmp6DBq2T/R.INSTALL6a8581ee3d4/RMySQL/src' | |
| installing to /usr/local/lib64/R/library/RMySQL/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RMySQL) | |
| begin installing package ‘RPostgreSQL’ | |
| * installing *source* package ‘RPostgreSQL’ ... | |
| ** package ‘RPostgreSQL’ successfully unpacked and MD5 sums checked | |
| checking for gcc... gcc | |
| checking for C compiler default output file name... a.out | |
| checking whether the C compiler works... yes | |
| checking whether we are cross compiling... no | |
| checking for suffix of executables... | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking target system type... x86_64-unknown-linux-gnu | |
| checking for pg_config... /usr/bin/pg_config | |
| checking for "/usr/include/postgresql/libpq-fe.h"... yes | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp2iUtUE/R.INSTALL6b2e1947ac7b/RPostgreSQL/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-DBI.c -o RS-DBI.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-PQescape.c -o RS-PQescape.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-PostgreSQL.c -o RS-PostgreSQL.o | |
| In file included from /usr/local/lib64/R/include/Rdefines.h:36:0, | |
| from S4R.h:64, | |
| from RS-DBI.h:29, | |
| from RS-PostgreSQL.h:25, | |
| from RS-PostgreSQL.c:17: | |
| RS-PostgreSQL.c: In function ‘RS_PostgreSQL_createDataMappings’: | |
| RS-PostgreSQL.c:446:13: warning: passing argument 1 of ‘Rf_protect’ from incompatible pointer type [-Wincompatible-pointer-types] | |
| PROTECT(flds = RS_DBI_allocFields(num_fields)); | |
| ^ | |
| /usr/local/lib64/R/include/Rinternals.h:661:31: note: in definition of macro ‘PROTECT’ | |
| #define PROTECT(s) Rf_protect(s) | |
| ^ | |
| /usr/local/lib64/R/include/Rinternals.h:1348:6: note: expected ‘SEXP {aka struct SEXPREC *}’ but argument is of type ‘RS_DBI_fields * {aka struct st_sdbi_fields *}’ | |
| SEXP Rf_protect(SEXP); | |
| ^~~~~~~~~~ | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-copy.c -o RS-pgsql-copy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-getResult.c -o RS-pgsql-getResult.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-pqexec.c -o RS-pgsql-pqexec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-pqexecparams.c -o RS-pgsql-pqexecparams.o | |
| gcc -shared -L/usr/local/lib64 -o RPostgreSQL.so RS-DBI.o RS-PQescape.o RS-PostgreSQL.o RS-pgsql-copy.o RS-pgsql-getResult.o RS-pgsql-pqexec.o RS-pgsql-pqexecparams.o -L/usr/lib/x86_64-linux-gnu -lpq | |
| make[1]: Leaving directory '/tmp/Rtmp2iUtUE/R.INSTALL6b2e1947ac7b/RPostgreSQL/src' | |
| installing to /usr/local/lib64/R/library/RPostgreSQL/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| Creating a generic function for ‘format’ from package ‘base’ in package ‘RPostgreSQL’ | |
| Creating a generic function for ‘print’ from package ‘base’ in package ‘RPostgreSQL’ | |
| Creating a generic function for ‘summary’ from package ‘base’ in package ‘RPostgreSQL’ | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RPostgreSQL) | |
| begin installing package ‘desc’ | |
| * installing *source* package ‘git2r’ ... | |
| ** package ‘git2r’ successfully unpacked and MD5 sums checked | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking for library containing inflate... -lz | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking pkg-config is at least version 0.9.0... yes | |
| checking for libssl... yes | |
| checking for library containing EVP_EncryptInit... -lcrypto | |
| checking for library containing SSL_library_init... no | |
| checking for library containing OPENSSL_init_ssl... none required | |
| checking for library containing libssh2_version... no | |
| configure: WARNING: | |
| --------------------------------------------- | |
| Unable to find the LibSSH2 library on this | |
| system. Building a version without support | |
| for SSH transport. | |
| To build with SSH support, please install: | |
| libssh2-1-dev (package on e.g. Debian and Ubuntu) | |
| libssh2-devel (package on e.g. Fedora, CentOS and RHEL) | |
| libssh2 (Homebrew package on OS X) | |
| and try again. | |
| If the LibSSH2 library is installed on | |
| your system but the git2r configuration | |
| is unable to find it, you can specify | |
| the include and lib path to LibSSH2 with: | |
| R CMD INSTALL --configure-args='--with-libssh2-include=INCLUDE_PATH --with-libssh2-lib=LIB_PATH' git2r | |
| --------------------------------------------- | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking for curl-config... /usr/bin/curl-config | |
| checking for the version of libcurl... 7.52.1 | |
| checking whether libcurl is usable... yes | |
| checking for curl_free... yes | |
| checking for ANSI C header files... no | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking size of void*... 8 | |
| checking for struct stat.st_mtim... yes | |
| checking for struct stat.st_mtimespec... no | |
| checking for struct stat.st_mtime_nsec... no | |
| checking for struct stat.st_mtim.tv_nsec... yes | |
| checking for futimens... yes | |
| checking for qsort_r... yes | |
| checking for qsort_s... no | |
| ----- Results of the git2r package configure ----- | |
| OpenSSL to talk over HTTPS...........: yes | |
| LibSSH2 to enable the SSH transport..: no | |
| -------------------------------------------------- | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp200mRA/R.INSTALL5c9246666c23/git2r/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r.c -o git2r.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_config.c -o git2r_config.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_error.c -o git2r_error.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_index.c -o git2r_index.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_note.c -o git2r_note.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_object.c -o git2r_object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_push.c -o git2r_push.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_status.c -o git2r_status.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/annotated_commit.c -o libgit2/src/annotated_commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/apply.c -o libgit2/src/apply.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attr_file.c -o libgit2/src/attr_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attr.c -o libgit2/src/attr.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attrcache.c -o libgit2/src/attrcache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blame_git.c -o libgit2/src/blame_git.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blame.c -o libgit2/src/blame.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blob.c -o libgit2/src/blob.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/branch.c -o libgit2/src/branch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/buf_text.c -o libgit2/src/buf_text.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/buffer.c -o libgit2/src/buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/cache.c -o libgit2/src/cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/checkout.c -o libgit2/src/checkout.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/cherrypick.c -o libgit2/src/cherrypick.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/clone.c -o libgit2/src/clone.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/commit_list.c -o libgit2/src/commit_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/commit.c -o libgit2/src/commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config_cache.c -o libgit2/src/config_cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config_file.c -o libgit2/src/config_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config.c -o libgit2/src/config.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/crlf.c -o libgit2/src/crlf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/curl_stream.c -o libgit2/src/curl_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/date.c -o libgit2/src/date.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/delta.c -o libgit2/src/delta.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/describe.c -o libgit2/src/describe.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_driver.c -o libgit2/src/diff_driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_file.c -o libgit2/src/diff_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_generate.c -o libgit2/src/diff_generate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_parse.c -o libgit2/src/diff_parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_print.c -o libgit2/src/diff_print.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_stats.c -o libgit2/src/diff_stats.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_tform.c -o libgit2/src/diff_tform.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_xdiff.c -o libgit2/src/diff_xdiff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff.c -o libgit2/src/diff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/errors.c -o libgit2/src/errors.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fetch.c -o libgit2/src/fetch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fetchhead.c -o libgit2/src/fetchhead.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/filebuf.c -o libgit2/src/filebuf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fileops.c -o libgit2/src/fileops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/filter.c -o libgit2/src/filter.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fnmatch.c -o libgit2/src/fnmatch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/global.c -o libgit2/src/global.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/graph.c -o libgit2/src/graph.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/hash.c -o libgit2/src/hash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/hashsig.c -o libgit2/src/hashsig.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/ident.c -o libgit2/src/ident.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/ignore.c -o libgit2/src/ignore.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/index.c -o libgit2/src/index.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/indexer.c -o libgit2/src/indexer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/iterator.c -o libgit2/src/iterator.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge_driver.c -o libgit2/src/merge_driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge_file.c -o libgit2/src/merge_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge.c -o libgit2/src/merge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/message.c -o libgit2/src/message.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/mwindow.c -o libgit2/src/mwindow.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/netops.c -o libgit2/src/netops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/notes.c -o libgit2/src/notes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/object_api.c -o libgit2/src/object_api.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/object.c -o libgit2/src/object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_loose.c -o libgit2/src/odb_loose.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_mempack.c -o libgit2/src/odb_mempack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_pack.c -o libgit2/src/odb_pack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb.c -o libgit2/src/odb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/oid.c -o libgit2/src/oid.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/oidarray.c -o libgit2/src/oidarray.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/openssl_stream.c -o libgit2/src/openssl_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pack-objects.c -o libgit2/src/pack-objects.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pack.c -o libgit2/src/pack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/patch_generate.c -o libgit2/src/patch_generate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/patch_parse.c -o libgit2/src/patch_parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/patch.c -o libgit2/src/patch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/path.c -o libgit2/src/path.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pathspec.c -o libgit2/src/pathspec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pool.c -o libgit2/src/pool.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/posix.c -o libgit2/src/posix.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pqueue.c -o libgit2/src/pqueue.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/proxy.c -o libgit2/src/proxy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/push.c -o libgit2/src/push.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/rebase.c -o libgit2/src/rebase.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refdb_fs.c -o libgit2/src/refdb_fs.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refdb.c -o libgit2/src/refdb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/reflog.c -o libgit2/src/reflog.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refs.c -o libgit2/src/refs.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refspec.c -o libgit2/src/refspec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/remote.c -o libgit2/src/remote.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/repository.c -o libgit2/src/repository.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/reset.c -o libgit2/src/reset.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/revert.c -o libgit2/src/revert.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/revparse.c -o libgit2/src/revparse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/revwalk.c -o libgit2/src/revwalk.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/settings.c -o libgit2/src/settings.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/sha1_lookup.c -o libgit2/src/sha1_lookup.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/signature.c -o libgit2/src/signature.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/socket_stream.c -o libgit2/src/socket_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/sortedcache.c -o libgit2/src/sortedcache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/stash.c -o libgit2/src/stash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/status.c -o libgit2/src/status.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/strmap.c -o libgit2/src/strmap.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/submodule.c -o libgit2/src/submodule.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/sysdir.c -o libgit2/src/sysdir.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tag.c -o libgit2/src/tag.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/thread-utils.c -o libgit2/src/thread-utils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tls_stream.c -o libgit2/src/tls_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/trace.c -o libgit2/src/trace.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transaction.c -o libgit2/src/transaction.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transport.c -o libgit2/src/transport.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tree-cache.c -o libgit2/src/tree-cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tree.c -o libgit2/src/tree.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tsort.c -o libgit2/src/tsort.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/util.c -o libgit2/src/util.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/varint.c -o libgit2/src/varint.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/vector.c -o libgit2/src/vector.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/zstream.c -o libgit2/src/zstream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/auth.c -o libgit2/src/transports/auth.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/cred_helpers.c -o libgit2/src/transports/cred_helpers.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/cred.c -o libgit2/src/transports/cred.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/git.c -o libgit2/src/transports/git.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/http.c -o libgit2/src/transports/http.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/local.c -o libgit2/src/transports/local.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/smart_pkt.c -o libgit2/src/transports/smart_pkt.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/smart_protocol.c -o libgit2/src/transports/smart_protocol.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/smart.c -o libgit2/src/transports/smart.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/ssh.c -o libgit2/src/transports/ssh.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/unix/map.c -o libgit2/src/unix/map.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/unix/realpath.c -o libgit2/src/unix/realpath.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xdiffi.c -o libgit2/src/xdiff/xdiffi.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xemit.c -o libgit2/src/xdiff/xemit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xhistogram.c -o libgit2/src/xdiff/xhistogram.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xmerge.c -o libgit2/src/xdiff/xmerge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xpatience.c -o libgit2/src/xdiff/xpatience.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xprepare.c -o libgit2/src/xdiff/xprepare.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xutils.c -o libgit2/src/xdiff/xutils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/deps/http-parser/http_parser.c -o libgit2/deps/http-parser/http_parser.o | |
| ar rcs libmygit.a libgit2/src/annotated_commit.o libgit2/src/apply.o libgit2/src/attr_file.o libgit2/src/attr.o libgit2/src/attrcache.o libgit2/src/blame_git.o libgit2/src/blame.o libgit2/src/blob.o libgit2/src/branch.o libgit2/src/buf_text.o libgit2/src/buffer.o libgit2/src/cache.o libgit2/src/checkout.o libgit2/src/cherrypick.o libgit2/src/clone.o libgit2/src/commit_list.o libgit2/src/commit.o libgit2/src/config_cache.o libgit2/src/config_file.o libgit2/src/config.o libgit2/src/crlf.o libgit2/src/curl_stream.o libgit2/src/date.o libgit2/src/delta.o libgit2/src/describe.o libgit2/src/diff_driver.o libgit2/src/diff_file.o libgit2/src/diff_generate.o libgit2/src/diff_parse.o libgit2/src/diff_print.o libgit2/src/diff_stats.o libgit2/src/diff_tform.o libgit2/src/diff_xdiff.o libgit2/src/diff.o libgit2/src/errors.o libgit2/src/fetch.o libgit2/src/fetchhead.o libgit2/src/filebuf.o libgit2/src/fileops.o libgit2/src/filter.o libgit2/src/fnmatch.o libgit2/src/global.o libgit2/src/graph.o libgit2/src/hash.o libgit2/src/hashsig.o libgit2/src/ident.o libgit2/src/ignore.o libgit2/src/index.o libgit2/src/indexer.o libgit2/src/iterator.o libgit2/src/merge_driver.o libgit2/src/merge_file.o libgit2/src/merge.o libgit2/src/message.o libgit2/src/mwindow.o libgit2/src/netops.o libgit2/src/notes.o libgit2/src/object_api.o libgit2/src/object.o libgit2/src/odb_loose.o libgit2/src/odb_mempack.o libgit2/src/odb_pack.o libgit2/src/odb.o libgit2/src/oid.o libgit2/src/oidarray.o libgit2/src/openssl_stream.o libgit2/src/pack-objects.o libgit2/src/pack.o libgit2/src/patch_generate.o libgit2/src/patch_parse.o libgit2/src/patch.o libgit2/src/path.o libgit2/src/pathspec.o libgit2/src/pool.o libgit2/src/posix.o libgit2/src/pqueue.o libgit2/src/proxy.o libgit2/src/push.o libgit2/src/rebase.o libgit2/src/refdb_fs.o libgit2/src/refdb.o libgit2/src/reflog.o libgit2/src/refs.o libgit2/src/refspec.o libgit2/src/remote.o libgit2/src/repository.o libgit2/src/reset.o libgit2/src/revert.o libgit2/src/revparse.o libgit2/src/revwalk.o libgit2/src/settings.o libgit2/src/sha1_lookup.o libgit2/src/signature.o libgit2/src/socket_stream.o libgit2/src/sortedcache.o libgit2/src/stash.o libgit2/src/status.o libgit2/src/strmap.o libgit2/src/submodule.o libgit2/src/sysdir.o libgit2/src/tag.o libgit2/src/thread-utils.o libgit2/src/tls_stream.o libgit2/src/trace.o libgit2/src/transaction.o libgit2/src/transport.o libgit2/src/tree-cache.o libgit2/src/tree.o libgit2/src/tsort.o libgit2/src/util.o libgit2/src/varint.o libgit2/src/vector.o libgit2/src/zstream.o libgit2/src/transports/auth.o libgit2/src/transports/cred_helpers.o libgit2/src/transports/cred.o libgit2/src/transports/git.o libgit2/src/transports/http.o libgit2/src/transports/local.o libgit2/src/transports/smart_pkt.o libgit2/src/transports/smart_protocol.o libgit2/src/transports/smart.o libgit2/src/transports/ssh.o libgit2/src/unix/map.o libgit2/src/unix/realpath.o libgit2/src/xdiff/xdiffi.o libgit2/src/xdiff/xemit.o libgit2/src/xdiff/xhistogram.o libgit2/src/xdiff/xmerge.o libgit2/src/xdiff/xpatience.o libgit2/src/xdiff/xprepare.o libgit2/src/xdiff/xutils.o libgit2/deps/http-parser/http_parser.o | |
| gcc -shared -L/usr/local/lib64 -o git2r.so git2r.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -L. -lmygit -lcrypto -lssl -lz -lcurl | |
| make[1]: Leaving directory '/tmp/Rtmp200mRA/R.INSTALL5c9246666c23/git2r/src' | |
| installing to /usr/local/lib64/R/library/git2r/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| Creating a generic function for ‘summary’ from package ‘base’ in package ‘git2r’ | |
| Creating a generic function for ‘diff’ from package ‘base’ in package ‘git2r’ | |
| Creating a generic function for ‘merge’ from package ‘base’ in package ‘git2r’ | |
| Creating a generic function for ‘plot’ from package ‘graphics’ in package ‘git2r’ | |
| Creating a generic function for ‘head’ from package ‘utils’ in package ‘git2r’ | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (git2r) | |
| begin installing package ‘RSQLite’ | |
| * installing *source* package ‘testthat’ ... | |
| ** package ‘testthat’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpMm48Wc/R.INSTALL69cd33f600a1/testthat/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c label.c -o label.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-catch.cpp -o test-catch.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-example.cpp -o test-example.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c test-runner.cpp -o test-runner.o | |
| g++ -shared -L/usr/local/lib64 -o testthat.so label.o reassign.o test-catch.o test-example.o test-runner.o | |
| make[1]: Leaving directory '/tmp/RtmpMm48Wc/R.INSTALL69cd33f600a1/testthat/src' | |
| installing to /usr/local/lib64/R/library/testthat/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (testthat) | |
| begin installing package ‘xml2’ | |
| * installing *source* package ‘desc’ ... | |
| ** package ‘desc’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (desc) | |
| begin installing package ‘htmltools’ | |
| * installing *source* package ‘stringi’ ... | |
| ** package ‘stringi’ successfully unpacked and MD5 sums checked | |
| checking for local ICUDT_DIR... icu55/data | |
| checking for R_HOME... /usr/local/lib64/R | |
| checking for R... /usr/local/lib64/R/bin/R | |
| checking for R >= 3.1.0... yes | |
| checking for cat... /usr/bin/cat | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking how to run the C preprocessor... g++ -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
| checking for egrep... /usr/bin/grep -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking elf.h usability... yes | |
| checking elf.h presence... yes | |
| checking for elf.h... yes | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking whether the C++ compiler supports the long long type... yes | |
| checking whether the compiler implements namespaces... yes | |
| checking whether the compiler supports Standard Template Library... yes | |
| checking whether std::map is available... yes | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking with pkg-config for ICU4C installed... 57.1 | |
| checking for ICU4C >= 50... yes | |
| checking for proper CPPFLAGS, LDFLAGS, and LIBS... done | |
| checking whether we may build an ICU-based project... yes | |
| checking for available ICU data library (ucnv, uloc, utrans)... yes | |
| checking for available ICU data library (ucol)... yes | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| config.status: creating src/uconfig_local.h | |
| config.status: creating src/install.libs.R | |
| *** stringi configure summary: | |
| ICU_FOUND=1 | |
| ICUDT_DIR=icu55/data | |
| STRINGI_CXXSTD=CXX_STD=CXX11 | |
| STRINGI_CFLAGS= -fpic | |
| STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H | |
| STRINGI_CXXFLAGS= -fpic | |
| STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu | |
| STRINGI_LIBS=-licui18n -licuuc -licudata | |
| *** compiler settings used: | |
| CC=gcc | |
| CPP=g++ -E | |
| LD=g++ | |
| CFLAGS=-g -O2 -fpic | |
| CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG | |
| CXX=g++ | |
| CXXFLAGS=-g -O2 -fpic | |
| LDFLAGS= | |
| LIBS= | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpNjeU6z/R.INSTALL5e1839ec4fd6/stringi/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_brkiter.cpp -o stri_brkiter.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_collator.cpp -o stri_collator.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_common.cpp -o stri_common.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_compare.cpp -o stri_compare.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_base.cpp -o stri_container_base.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listint.cpp -o stri_container_listint.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listraw.cpp -o stri_container_listraw.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_listutf8.cpp -o stri_container_listutf8.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_regex.cpp -o stri_container_regex.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_usearch.cpp -o stri_container_usearch.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf16.cpp -o stri_container_utf16.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8.cpp -o stri_container_utf8.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_detection.cpp -o stri_encoding_detection.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_encoding_management.cpp -o stri_encoding_management.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_escape.cpp -o stri_escape.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_exception.cpp -o stri_exception.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ICU_settings.cpp -o stri_ICU_settings.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_join.cpp -o stri_join.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_length.cpp -o stri_length.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_pad.cpp -o stri_pad.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_prepare_arg.cpp -o stri_prepare_arg.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_random.cpp -o stri_random.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_reverse.cpp -o stri_reverse.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_count.cpp -o stri_search_class_count.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_detect.cpp -o stri_search_class_detect.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_extract.cpp -o stri_search_class_extract.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_locate.cpp -o stri_search_class_locate.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_replace.cpp -o stri_search_class_replace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_split.cpp -o stri_search_class_split.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_subset.cpp -o stri_search_class_subset.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_class_trim.cpp -o stri_search_class_trim.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_common.cpp -o stri_search_common.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_count.cpp -o stri_search_coll_count.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_split.cpp -o stri_search_coll_split.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_in.cpp -o stri_search_in.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_replace.cpp -o stri_search_other_replace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_other_split.cpp -o stri_search_other_split.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_count.cpp -o stri_search_regex_count.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_match.cpp -o stri_search_regex_match.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_split.cpp -o stri_search_regex_split.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sort.cpp -o stri_sort.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stats.cpp -o stri_stats.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_stringi.cpp -o stri_stringi.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_sub.cpp -o stri_sub.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_test.cpp -o stri_test.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_zone.cpp -o stri_time_zone.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_calendar.cpp -o stri_time_calendar.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_symbols.cpp -o stri_time_symbols.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_time_format.cpp -o stri_time_format.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_casemap.cpp -o stri_trans_casemap.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_other.cpp -o stri_trans_other.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_normalization.cpp -o stri_trans_normalization.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_ucnv.cpp -o stri_ucnv.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_uloc.cpp -o stri_uloc.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_utils.cpp -o stri_utils.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -g -O2 -c stri_wrap.cpp -o stri_wrap.o | |
| g++ -shared -L/usr/local/lib64 -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_replace.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata | |
| make[1]: Leaving directory '/tmp/RtmpNjeU6z/R.INSTALL5e1839ec4fd6/stringi/src' | |
| installing via 'install.libs.R' to /usr/local/lib64/R/library/stringi | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (stringi) | |
| begin installing package ‘tibble’ | |
| * installing *source* package ‘htmltools’ ... | |
| ** package ‘htmltools’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpnjxOQZ/R.INSTALL6d63727d3fd6/htmltools/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c template.cpp -o template.o | |
| g++ -shared -L/usr/local/lib64 -o htmltools.so RcppExports.o template.o | |
| make[1]: Leaving directory '/tmp/RtmpnjxOQZ/R.INSTALL6d63727d3fd6/htmltools/src' | |
| installing to /usr/local/lib64/R/library/htmltools/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (htmltools) | |
| begin installing package ‘stringr’ | |
| * installing *source* package ‘stringr’ ... | |
| ** package ‘stringr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (stringr) | |
| begin installing package ‘evaluate’ | |
| * installing *source* package ‘evaluate’ ... | |
| ** package ‘evaluate’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (evaluate) | |
| begin installing package ‘knitr’ | |
| * installing *source* package ‘knitr’ ... | |
| ** package ‘knitr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** demo | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (knitr) | |
| * installing *source* package ‘tibble’ ... | |
| ** package ‘tibble’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpvVGNZN/R.INSTALL6de62c770ff3/tibble/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -g -O2 -c matrixToDataFrame.cpp -o matrixToDataFrame.o | |
| g++ -shared -L/usr/local/lib64 -o tibble.so RcppExports.o matrixToDataFrame.o | |
| make[1]: Leaving directory '/tmp/RtmpvVGNZN/R.INSTALL6de62c770ff3/tibble/src' | |
| installing to /usr/local/lib64/R/library/tibble/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (tibble) | |
| begin installing package ‘dplyr’ | |
| Makefile:160: recipe for target 'xml2.ts' failed | |
| make: *** [xml2.ts] Error 1 | |
| * installing *source* package ‘RSQLite’ ... | |
| ** package ‘RSQLite’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpbKmKxF/R.INSTALL6d3e1ae525ec/RSQLite/src' | |
| Makevars:21: Makevars.local: No such file or directory | |
| touch "Makevars.local" | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c SqliteConnection.cpp -o SqliteConnection.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c SqliteDataFrame.cpp -o SqliteDataFrame.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c SqliteResult.cpp -o SqliteResult.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c SqliteResultImpl.cpp -o SqliteResultImpl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c affinity.c -o affinity.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c connection.cpp -o connection.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c import-file.c -o import-file.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c result.cpp -o result.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c rsqlite.cpp -o rsqlite.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c sqlite3/extension-functions.c -o sqlite3/extension-functions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c sqlite3/sqlite3.c -o sqlite3/sqlite3.o | |
| g++ -shared -L/usr/local/lib64 -o RSQLite.so RcppExports.o SqliteConnection.o SqliteDataFrame.o SqliteResult.o SqliteResultImpl.o affinity.o connection.o import-file.o result.o rsqlite.o sqlite3/extension-functions.o sqlite3/sqlite3.o | |
| make[1]: Leaving directory '/tmp/RtmpbKmKxF/R.INSTALL6d3e1ae525ec/RSQLite/src' | |
| installing to /usr/local/lib64/R/library/RSQLite/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (RSQLite) | |
| ^[* installing *source* package ‘dplyr’ ... | |
| ** package ‘dplyr’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpOEGUHj/R.INSTALL6e501697bfcc/dplyr/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c address.cpp -o address.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c api.cpp -o api.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c arrange.cpp -o arrange.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c between.cpp -o between.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c bind.cpp -o bind.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c combine_variables.cpp -o combine_variables.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c distinct.cpp -o distinct.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c dplyr.cpp -o dplyr.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c filter.cpp -o filter.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c group_indices.cpp -o group_indices.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c init.cpp -o init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c join.cpp -o join.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c nth.cpp -o nth.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c select.cpp -o select.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c strings_addresses.cpp -o strings_addresses.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c summarise.cpp -o summarise.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c test.cpp -o test.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -g -O2 -c window.cpp -o window.o | |
| g++ -shared -L/usr/local/lib64 -o dplyr.so RcppExports.o address.o api.o arrange.o between.o bind.o combine_variables.o distinct.o dplyr.o filter.o group_indices.o init.o join.o nth.o select.o strings_addresses.o summarise.o test.o window.o | |
| make[1]: Leaving directory '/tmp/RtmpOEGUHj/R.INSTALL6e501697bfcc/dplyr/src' | |
| installing to /usr/local/lib64/R/library/dplyr/libs | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (dplyr) | |
| make: Target 'all' not remade because of errors. | |
| * installing *source* package ‘jsonlite’ ... | |
| ** package ‘jsonlite’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpZbdqu5/R.INSTALL5c575b12b4a/jsonlite/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_array.c -o collapse_array.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_object.c -o collapse_object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c escape_chars.c -o escape_chars.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c null_to_na.c -o null_to_na.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c num_to_char.c -o num_to_char.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c parse.c -o parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c prettify.c -o prettify.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c push_parser.c -o push_parser.o | |
| push_parser.c: In function ‘get_connection’: | |
| push_parser.c:15:10: warning: implicit declaration of function ‘R_GetConnection’ [-Wimplicit-function-declaration] | |
| return R_GetConnection(con); | |
| ^~~~~~~~~~~~~~~ | |
| push_parser.c:15:10: warning: return makes pointer from integer without a cast [-Wint-conversion] | |
| return R_GetConnection(con); | |
| ^~~~~~~~~~~~~~~~~~~~ | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c r-base64.c -o r-base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c register.c -o register.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c row_collapse.c -o row_collapse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c transpose_list.c -o transpose_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c validate.c -o validate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o | |
| ar rcs libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o | |
| gcc -shared -L/usr/local/lib64 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -L. -lstatyajl | |
| make[1]: Leaving directory '/tmp/RtmpZbdqu5/R.INSTALL5c575b12b4a/jsonlite/src' | |
| installing to /usr/local/lib64/R/library/jsonlite/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| Error in dyn.load(file, DLLpath = DLLpath, ...) : | |
| unable to load shared object '/usr/local/lib64/R/library/jsonlite/libs/jsonlite.so': | |
| /usr/local/lib64/R/library/jsonlite/libs/jsonlite.so: undefined symbol: R_GetConnection | |
| Error: loading failed | |
| Execution halted | |
| ERROR: loading failed | |
| * removing ‘/usr/local/lib64/R/library/jsonlite’ | |
| cat: httr.out: No such file or directory | |
| * installing *source* package ‘xml2’ ... | |
| ** package ‘xml2’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/libxml2 | |
| Using PKG_LIBS=-lxml2 | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpWXmXuW/R.INSTALL6d55b6a28f2/xml2/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c connection.cpp -o connection.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c xml2_doc.cpp -o xml2_doc.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c xml2_init.cpp -o xml2_init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c xml2_namespace.cpp -o xml2_namespace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c xml2_node.cpp -o xml2_node.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c xml2_output.cpp -o xml2_output.o | |
| xml2_output.cpp: In function ‘Rconn* get_connection(SEXP)’: | |
| xml2_output.cpp:16:29: error: ‘R_GetConnection’ was not declared in this scope | |
| return R_GetConnection(con); | |
| ^ | |
| /usr/local/lib64/R/etc/Makeconf:141: recipe for target 'xml2_output.o' failed | |
| make[1]: *** [xml2_output.o] Error 1 | |
| make[1]: Leaving directory '/tmp/RtmpWXmXuW/R.INSTALL6d55b6a28f2/xml2/src' | |
| ERROR: compilation failed for package ‘xml2’ | |
| * removing ‘/usr/local/lib64/R/library/xml2’ | |
| cat: devtools.out: No such file or directory | |
| cat: roxygen2.out: No such file or directory | |
| cat: rmarkdown.out: No such file or directory | |
| The downloaded source packages are in | |
| ‘/tmp/RtmpUQGrLq/make_packages’ | |
| Updating HTML index of packages in '.Library' | |
| Making 'packages.html' ... done | |
| Warning message: | |
| In install.packages(c("devtools", "roxygen2", "testthat", "Rcpp", : | |
| installation of one or more packages failed, | |
| probably ‘jsonlite’, ‘httr’, ‘xml2’, ‘devtools’, ‘roxygen2’, ‘rmarkdown’ | |
| > | |
| > | |
| R Under development (unstable) (2016-03-16 r70335) -- "Unsuffered Consequences" | |
| Copyright (C) 2016 The R Foundation for Statistical Computing | |
| Platform: x86_64-pc-linux-gnu (64-bit) | |
| R is free software and comes with ABSOLUTELY NO WARRANTY. | |
| You are welcome to redistribute it under certain conditions. | |
| Type 'license()' or 'licence()' for distribution details. | |
| Natural language support but running in an English locale | |
| R is a collaborative project with many contributors. | |
| Type 'contributors()' for more information and | |
| 'citation()' on how to cite R or R packages in publications. | |
| Type 'demo()' for some demos, 'help()' for on-line help, or | |
| 'help.start()' for an HTML browser interface to help. | |
| Type 'q()' to quit R. | |
| > devtools::install_github('rstats-db/RPostgres') | |
| Error in loadNamespace(name) : there is no package called ‘devtools’ | |
| Calls: :: ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous> | |
| Execution halted | |
| warning: the merge base between a9c667b703491606572682cda256c29ee3373885 and [a1ccebfa864c46eaf1ac7e63e3255531c2eaf9e3] must be skipped. | |
| So we cannot be sure the first bad commit is between 453d361c9edb0a3bbef30cd92c9ed6a8ab78172a and a9c667b703491606572682cda256c29ee3373885. | |
| We continue anyway. | |
| Bisecting: 765 revisions left to test after this (roughly 10 steps) | |
| [42baa85c438205d2d272a91b63ad4a5270f32dd5] maintainer-mode changes | |
| running ../pool-test/test-script.sh | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| loading site script './config.site' | |
| loading build-specific script './config.site' | |
| checking for pwd... /usr/bin/pwd | |
| checking whether builddir is srcdir... yes | |
| checking for working aclocal... found | |
| checking for working autoconf... found | |
| checking for working automake... found | |
| checking for working autoheader... found | |
| checking whether ln -s works... yes | |
| checking for bison... bison -y | |
| checking for ar... ar | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking for sed... /usr/bin/sed | |
| checking for which... /usr/bin/which | |
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| checking whether texi2any version is at least 5.1... yes | |
| checking for ginstall-info... no | |
| checking for install-info... no | |
| checking for texi2dvi... /usr/bin/texi2dvi | |
| checking for kpsewhich... /usr/bin/kpsewhich | |
| checking for latex inconsolata package... found zi4.sty | |
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| using default browser ... /usr/bin/xdg-open | |
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| checking for xdg-open... /usr/bin/xdg-open | |
| checking for notangle... false | |
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| checking for pkg-config... /usr/bin/pkg-config | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
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| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking how to run the C preprocessor... gcc -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
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| checking whether gcc needs -traditional... no | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking minix/config.h usability... no | |
| checking minix/config.h presence... no | |
| checking for minix/config.h... no | |
| checking whether it is safe to define __EXTENSIONS__... yes | |
| checking how to run the C preprocessor... gcc -E | |
| checking for f95... f95 | |
| checking whether we are using the GNU Fortran 77 compiler... yes | |
| checking whether f95 accepts -g... yes | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking whether g++ can compile C++ code... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking whether __attribute__((visibility())) is supported... yes | |
| checking whether gcc accepts -fvisibility... yes | |
| checking whether f95 accepts -fvisibility... yes | |
| checking for gcc... gcc | |
| checking whether we are using the GNU Objective C compiler... no | |
| checking whether gcc accepts -g... no | |
| checking for Objective C++ compiler... trying some possibilities | |
| checking whether g++ can compile ObjC++... no | |
| checking whether can compile ObjC++... no | |
| no working ObjC++ compiler found | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... (cached) /usr/bin/sed | |
| checking for fgrep... /usr/bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking the maximum length of command line arguments... 1572864 | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for a working dd... /usr/bin/dd | |
| checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking for f95 option to produce PIC... -fPIC | |
| checking if f95 PIC flag -fPIC works... yes | |
| checking if f95 static flag -static works... yes | |
| checking if f95 supports -c -o file.o... yes | |
| checking if f95 supports -c -o file.o... (cached) yes | |
| checking whether the f95 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for cos in -lm... yes | |
| checking for sin in -lm... yes | |
| checking for dlopen in -ldl... yes | |
| checking readline/history.h usability... yes | |
| checking readline/history.h presence... yes | |
| checking for readline/history.h... yes | |
| checking readline/readline.h usability... yes | |
| checking readline/readline.h presence... yes | |
| checking for readline/readline.h... yes | |
| checking for rl_callback_read_char in -lreadline... yes | |
| checking for history_truncate_file... yes | |
| checking whether rl_callback_sigcleanup exists and is declared... yes | |
| checking whether rl_completion_matches exists and is declared... yes | |
| checking whether rl_resize_terminal exists and is declared... yes | |
| checking whether rl_sort_completion_matches exists and is declared... yes | |
| checking for ANSI C header files... (cached) yes | |
| checking for dirent.h that defines DIR... yes | |
| checking for library containing opendir... none required | |
| checking for sys/wait.h that is POSIX.1 compatible... yes | |
| checking for dlfcn.h... (cached) yes | |
| checking fcntl.h usability... yes | |
| checking fcntl.h presence... yes | |
| checking for fcntl.h... yes | |
| checking glob.h usability... yes | |
| checking glob.h presence... yes | |
| checking for glob.h... yes | |
| checking grp.h usability... yes | |
| checking grp.h presence... yes | |
| checking for grp.h... yes | |
| checking pwd.h usability... yes | |
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| checking for pwd.h... yes | |
| checking sched.h usability... yes | |
| checking sched.h presence... yes | |
| checking for sched.h... yes | |
| checking for strings.h... (cached) yes | |
| checking sys/resource.h usability... yes | |
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| checking sys/select.h usability... yes | |
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| checking sys/socket.h usability... yes | |
| checking sys/socket.h presence... yes | |
| checking for sys/socket.h... yes | |
| checking for sys/stat.h... (cached) yes | |
| checking sys/time.h usability... yes | |
| checking sys/time.h presence... yes | |
| checking for sys/time.h... yes | |
| checking sys/times.h usability... yes | |
| checking sys/times.h presence... yes | |
| checking for sys/times.h... yes | |
| checking sys/utsname.h usability... yes | |
| checking sys/utsname.h presence... yes | |
| checking for sys/utsname.h... yes | |
| checking for unistd.h... (cached) yes | |
| checking utime.h usability... yes | |
| checking utime.h presence... yes | |
| checking for utime.h... yes | |
| checking arpa/inet.h usability... yes | |
| checking arpa/inet.h presence... yes | |
| checking for arpa/inet.h... yes | |
| checking dl.h usability... no | |
| checking dl.h presence... no | |
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| checking elf.h usability... yes | |
| checking elf.h presence... yes | |
| checking for elf.h... yes | |
| checking features.h usability... yes | |
| checking features.h presence... yes | |
| checking for features.h... yes | |
| checking floatingpoint.h usability... no | |
| checking floatingpoint.h presence... no | |
| checking for floatingpoint.h... no | |
| checking langinfo.h usability... yes | |
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| checking netdb.h usability... yes | |
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| checking for netdb.h... yes | |
| checking netinet/in.h usability... yes | |
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| checking sys/param.h usability... yes | |
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| checking stdalign.h usability... yes | |
| checking stdalign.h presence... yes | |
| checking for stdalign.h... yes | |
| checking errno.h usability... yes | |
| checking errno.h presence... yes | |
| checking for errno.h... yes | |
| checking for inttypes.h... (cached) yes | |
| checking limits.h usability... yes | |
| checking limits.h presence... yes | |
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| checking locale.h usability... yes | |
| checking locale.h presence... yes | |
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| checking stdarg.h usability... yes | |
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| checking stdbool.h usability... yes | |
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| checking for stdbool.h... yes | |
| checking for stdint.h... (cached) yes | |
| checking for string.h... (cached) yes | |
| checking whether setjmp.h is POSIX.1 compatible... yes | |
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| checking whether siglongjmp is declared... yes | |
| checking for GNU C library with version >= 2... yes | |
| checking return type of signal handlers... void | |
| checking for uint64_t... yes | |
| checking for int64_t... yes | |
| checking for int_fast64_t... yes | |
| checking for pid_t... yes | |
| checking for size_t... yes | |
| checking whether SIZE_MAX is declared... yes | |
| checking for blkcnt_t... yes | |
| checking for type of socket length... socklen_t * | |
| checking for stack_t... yes | |
| checking for intptr_t... yes | |
| checking for uintptr_t... yes | |
| checking whether byte ordering is bigendian... no | |
| checking for an ANSI C-conforming const... yes | |
| checking for gcc option to accept ISO C99... none needed | |
| checking for gcc option to accept ISO Standard C... (cached) none needed | |
| checking for inline... inline | |
| checking size of int... 4 | |
| checking size of long... 8 | |
| checking size of long long... 8 | |
| checking size of double... 8 | |
| checking size of size_t... 8 | |
| checking size of long double... 16 | |
| checking whether we can compute C Make dependencies... yes, using $(CC) -MM | |
| checking whether gcc supports -c -o FILE.lo... yes | |
| checking for gcc option to support OpenMP... -fopenmp | |
| checking how to get verbose linking output from f95... -v | |
| checking for Fortran 77 libraries of f95... -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath | |
| checking how to get verbose linking output from gcc... -v | |
| checking for C libraries of gcc... -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgcc_s | |
| checking for dummy main to link with Fortran 77 libraries... none | |
| checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore | |
| checking whether f95 appends underscores to external names... yes | |
| checking whether f95 appends extra underscores to external names... no | |
| checking whether mixed C/Fortran code can be run... yes | |
| checking whether f95 and gcc agree on int and double... yes | |
| checking whether f95 and gcc agree on double complex... yes | |
| checking for f95 option to support OpenMP... -fopenmp | |
| checking whether g++ accepts -M for generating dependencies... yes | |
| checking for g++ option to support OpenMP... -fopenmp | |
| checking whether we can compute ObjC Make dependencies... no | |
| checking whether C runtime needs -D__NO_MATH_INLINES... no | |
| checking for xmkmf... no | |
| checking whether g++ supports C++98 features by default... no | |
| checking whether g++ supports C++98 features with -std=gnu++98... yes | |
| checking whether g++ supports C++11 features by default... no | |
| checking whether g++ supports C++11 features with -std=gnu++11... yes | |
| checking whether g++ supports C++14 features by default... yes | |
| checking for off_t... yes | |
| checking for working alloca.h... yes | |
| checking for alloca... yes | |
| checking whether alloca is declared... yes | |
| checking whether expm1 exists and is declared... yes | |
| checking whether hypot exists and is declared... yes | |
| checking whether log1p exists and is declared... yes | |
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| checking whether rint exists and is declared... yes | |
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| checking whether va_copy exists and is declared... yes | |
| checking for isblank... yes | |
| checking sunmath.h usability... no | |
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| checking for sunmath.h... no | |
| checking for cospi in -lsunmath... no | |
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| checking for cospi... no | |
| checking for exp10... yes | |
| checking for pown... no | |
| checking for sinpi... no | |
| checking for tanpi... no | |
| checking for __cospi... no | |
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| checking for __tanpi... no | |
| checking for fseeko... yes | |
| checking for ftello... yes | |
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| checking whether setenv exists and is declared... yes | |
| checking whether unsetenv exists and is declared... yes | |
| checking whether getrlimit exists and is declared... yes | |
| checking whether getrusage exists and is declared... yes | |
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| checking whether gettimeofday exists and is declared... yes | |
| checking whether utimes exists and is declared... yes | |
| checking whether times exists and is declared... yes | |
| checking whether gmtime_r exists and is declared... yes | |
| checking whether localtime_r exists and is declared... yes | |
| checking whether nl_langinfo exists and is declared... yes | |
| checking whether access exists and is declared... yes | |
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| checking whether execv exists and is declared... yes | |
| checking whether ftruncate exists and is declared... yes | |
| checking whether getcwd exists and is declared... yes | |
| checking whether geteuid exists and is declared... yes | |
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| checking whether link exists and is declared... yes | |
| checking whether readlink exists and is declared... yes | |
| checking whether symlink exists and is declared... yes | |
| checking whether sysconf exists and is declared... yes | |
| checking whether sched_setaffinity exists and is declared... yes | |
| checking whether sched_getaffinity exists and is declared... yes | |
| checking whether utime exists and is declared... yes | |
| checking whether utimensat exists and is declared... yes | |
| checking for clock_gettime in -lrt... yes | |
| checking whether clock_gettime exists and is declared... yes | |
| checking whether timespec_get exists and is declared... yes | |
| checking for putenv... yes | |
| checking whether putenv is declared... yes | |
| checking for vasprintf... yes | |
| checking whether vasprintf is declared... yes | |
| checking for mempcpy... yes | |
| checking for realpath... yes | |
| checking whether realpath is declared... yes | |
| checking whether glob exists and is declared... yes | |
| checking for isnan... yes | |
| checking whether isfinite is declared... yes | |
| checking whether isnan is declared... yes | |
| checking whether you have IEEE 754 floating-point arithmetic... yes | |
| checking whether putenv("FOO") can unset an environment variable... yes | |
| checking whether putenv("FOO=") can unset an environment variable... no | |
| checking for nl_langinfo and CODESET... yes | |
| checking for mkdtemp... yes | |
| checking for strdup... yes | |
| checking for strncasecmp... yes | |
| checking whether mkdtemp is declared... yes | |
| checking whether strdup is declared... yes | |
| checking whether strncasecmp is declared... yes | |
| checking for library containing connect... none required | |
| checking for library containing gethostbyname... none required | |
| checking for library containing xdr_string... none required | |
| checking for working calloc... yes | |
| checking for working isfinite... yes | |
| checking for working log1p... yes | |
| checking whether ftell works correctly on files opened for append... yes | |
| checking for working sigaction... yes | |
| checking whether mktime sets errno... no | |
| checking whether mktime works correctly outside 1902-2037... yes | |
| checking complex.h usability... yes | |
| checking complex.h presence... yes | |
| checking for complex.h... yes | |
| checking for double complex... yes | |
| checking whether C99 double complex is supported... yes | |
| checking whether cabs exists and is declared... yes | |
| checking whether carg exists and is declared... yes | |
| checking whether cexp exists and is declared... yes | |
| checking whether clog exists and is declared... yes | |
| checking whether csqrt exists and is declared... yes | |
| checking whether cpow exists and is declared... yes | |
| checking whether ccos exists and is declared... yes | |
| checking whether csin exists and is declared... yes | |
| checking whether ctan exists and is declared... yes | |
| checking whether cacos exists and is declared... yes | |
| checking whether casin exists and is declared... yes | |
| checking whether catan exists and is declared... yes | |
| checking whether ccosh exists and is declared... yes | |
| checking whether csinh exists and is declared... yes | |
| checking whether ctanh exists and is declared... yes | |
| checking whether 'struct tm' includes tm_zone... yes | |
| checking whether 'struct tm' includes tm_gmtoff... yes | |
| checking iconv.h usability... yes | |
| checking iconv.h presence... yes | |
| checking for iconv.h... yes | |
| checking for iconv... yes | |
| checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes | |
| checking for iconvlist... no | |
| checking for iconv... yes | |
| checking for iconv declaration... | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking wchar.h usability... yes | |
| checking wchar.h presence... yes | |
| checking for wchar.h... yes | |
| checking wctype.h usability... yes | |
| checking wctype.h presence... yes | |
| checking for wctype.h... yes | |
| checking whether mbrtowc exists and is declared... yes | |
| checking whether wcrtomb exists and is declared... yes | |
| checking whether wcscoll exists and is declared... yes | |
| checking whether wcsftime exists and is declared... yes | |
| checking whether wcstod exists and is declared... yes | |
| checking whether mbstowcs exists and is declared... yes | |
| checking whether wcstombs exists and is declared... yes | |
| checking whether wctrans exists and is declared... yes | |
| checking whether iswblank exists and is declared... yes | |
| checking whether wctype exists and is declared... yes | |
| checking whether iswctype exists and is declared... yes | |
| checking for wctrans_t... yes | |
| checking for mbstate_t... yes | |
| checking for ICU... yes | |
| checking for X... libraries , headers | |
| checking for gethostbyname... yes | |
| checking for connect... yes | |
| checking for remove... yes | |
| checking for shmat... yes | |
| checking for IceConnectionNumber in -lICE... yes | |
| checking X11/Intrinsic.h usability... yes | |
| checking X11/Intrinsic.h presence... yes | |
| checking for X11/Intrinsic.h... yes | |
| checking for XtToolkitInitialize in -lXt... yes | |
| using X11 ... yes | |
| checking for KeySym... yes | |
| checking X11/Xmu/Atoms.h usability... no | |
| checking X11/Xmu/Atoms.h presence... no | |
| checking for X11/Xmu/Atoms.h... no | |
| checking whether pkg-config knows about cairo and pango... yes | |
| checking whether cairo including pango is >= 1.2 and works... yes | |
| checking for tclConfig.sh... no | |
| checking for tclConfig.sh in library (sub)directories... no | |
| checking for tkConfig.sh... no | |
| checking for tkConfig.sh in library (sub)directories... no | |
| checking for tcl.h... no | |
| checking for BSD networking... yes | |
| checking rpc/types.h usability... yes | |
| checking rpc/types.h presence... yes | |
| checking for rpc/types.h... yes | |
| checking for rpc/xdr.h... yes | |
| checking for XDR support... yes | |
| checking for inflateInit2_ in -lz... yes | |
| checking zlib.h usability... yes | |
| checking zlib.h presence... yes | |
| checking for zlib.h... yes | |
| checking if zlib version >= 1.2.5... yes | |
| checking whether zlib support suffices... yes | |
| checking mmap support for zlib... yes | |
| checking for BZ2_bzlibVersion in -lbz2... yes | |
| checking bzlib.h usability... yes | |
| checking bzlib.h presence... yes | |
| checking for bzlib.h... yes | |
| checking if bzip2 version >= 1.0.6... yes | |
| checking whether bzip2 support suffices... yes | |
| checking for lzma_version_number in -llzma... yes | |
| checking lzma.h usability... yes | |
| checking lzma.h presence... yes | |
| checking for lzma.h... yes | |
| checking if lzma version >= 5.0.3... yes | |
| checking for pcre_fullinfo in -lpcre... yes | |
| checking pcre.h usability... yes | |
| checking pcre.h presence... yes | |
| checking for pcre.h... yes | |
| checking pcre/pcre.h usability... no | |
| checking pcre/pcre.h presence... no | |
| checking for pcre/pcre.h... no | |
| checking if PCRE version >= 8.10, < 10.0 and has UTF-8 support... yes | |
| checking if PCRE version >= 8.32... yes | |
| checking whether PCRE support suffices... yes | |
| checking for curl-config... /usr/bin/curl-config | |
| checking libcurl version ... 7.52.1 | |
| checking curl/curl.h usability... yes | |
| checking curl/curl.h presence... yes | |
| checking for curl/curl.h... yes | |
| checking if libcurl is version 7 and >= 7.28.0... yes | |
| checking if libcurl supports https... yes | |
| checking if jpeglib version >= 6b... yes | |
| checking for jpeg_destroy_compress in -ljpeg... yes | |
| checking if libpng version >= 1.2.7... yes | |
| checking for png_create_write_struct in -lpng... yes | |
| checking tiffio.h usability... yes | |
| checking tiffio.h presence... yes | |
| checking for tiffio.h... yes | |
| checking for TIFFOpen in -ltiff... yes | |
| checking whether leap seconds are treated according to POSIX... yes | |
| checking for inline... inline | |
| checking for sys/time.h... (cached) yes | |
| checking for stdlib.h... (cached) yes | |
| checking for unistd.h... (cached) yes | |
| checking for sys/param.h... (cached) yes | |
| checking for struct stat.st_atim.tv_nsec... yes | |
| checking whether struct stat.st_atim is of type struct timespec... yes | |
| checking for setitimer... yes | |
| checking for special C compiler options needed for large files... no | |
| checking for _FILE_OFFSET_BITS value needed for large files... no | |
| checking for _LARGEFILE_SOURCE value needed for large files... no | |
| checking whether KERN_USRSTACK sysctl is supported... no | |
| checking for visible __lib_stack_end... yes | |
| checking for lpr... no | |
| checking for lp... no | |
| checking for paperconf... /usr/bin/paperconf | |
| checking for gfortran... gfortran | |
| checking whether we are using the GNU Fortran compiler... yes | |
| checking whether gfortran accepts -g... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking for gfortran option to produce PIC... -fPIC | |
| checking if gfortran PIC flag -fPIC works... yes | |
| checking if gfortran static flag -static works... yes | |
| checking if gfortran supports -c -o file.o... yes | |
| checking if gfortran supports -c -o file.o... (cached) yes | |
| checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for Fortran flag to compile .f90 files... none | |
| checking for Fortran flag to compile .f95 files... none | |
| checking for gfortran option to support OpenMP... -fopenmp | |
| checking whether NLS is requested... yes | |
| Configuring src/extra/intl directory | |
| checking for a thread-safe mkdir -p... /usr/bin/mkdir -p | |
| checking whether we are using the GNU C Library 2 or newer... yes | |
| checking for ranlib... (cached) ranlib | |
| checking for simple visibility declarations... yes | |
| checking for stdint.h... yes | |
| checking for getpagesize... yes | |
| checking for working mmap... yes | |
| checking whether integer division by zero raises SIGFPE... yes | |
| checking for inttypes.h... yes | |
| checking for unsigned long long int... yes | |
| checking for inttypes.h... (cached) yes | |
| checking whether the inttypes.h PRIxNN macros are broken... no | |
| checking for ld used by gcc... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking for shared library run path origin... done | |
| checking whether imported symbols can be declared weak... yes | |
| checking for multithread API to use... none | |
| checking argz.h usability... yes | |
| checking argz.h presence... yes | |
| checking for argz.h... yes | |
| checking for inttypes.h... (cached) yes | |
| checking for limits.h... (cached) yes | |
| checking for unistd.h... (cached) yes | |
| checking for sys/param.h... (cached) yes | |
| checking for getcwd... yes | |
| checking for getegid... yes | |
| checking for geteuid... yes | |
| checking for getgid... yes | |
| checking for getuid... yes | |
| checking for mempcpy... (cached) yes | |
| checking for munmap... yes | |
| checking for stpcpy... yes | |
| checking for strcasecmp... yes | |
| checking for strdup... (cached) yes | |
| checking for strtoul... yes | |
| checking for tsearch... yes | |
| checking for argz_count... yes | |
| checking for argz_stringify... yes | |
| checking for argz_next... yes | |
| checking for __fsetlocking... yes | |
| checking whether feof_unlocked is declared... yes | |
| checking whether fgets_unlocked is declared... yes | |
| checking for iconv... (cached) yes | |
| checking for iconv declaration... (cached) | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking for NL_LOCALE_NAME macro... yes | |
| checking for bison... bison | |
| checking version of bison... 3.0.4, ok | |
| checking for long long int... yes | |
| checking for long double... yes | |
| checking for wchar_t... yes | |
| checking for wint_t... yes | |
| checking for intmax_t... yes | |
| checking whether printf() supports POSIX/XSI format strings... yes | |
| checking whether we are using the GNU C Library 2.1 or newer... yes | |
| checking for stdint.h... (cached) yes | |
| checking for SIZE_MAX... yes | |
| checking for stdint.h... (cached) yes | |
| checking for CFPreferencesCopyAppValue... no | |
| checking for CFLocaleCopyCurrent... no | |
| checking for ptrdiff_t... yes | |
| checking stddef.h usability... yes | |
| checking stddef.h presence... yes | |
| checking for stddef.h... yes | |
| checking for stdlib.h... (cached) yes | |
| checking for string.h... (cached) yes | |
| checking for asprintf... yes | |
| checking for fwprintf... yes | |
| checking for putenv... (cached) yes | |
| checking for setenv... yes | |
| checking for setlocale... yes | |
| checking for snprintf... yes | |
| checking for wcslen... yes | |
| checking whether _snprintf is declared... no | |
| checking whether _snwprintf is declared... no | |
| checking whether getc_unlocked is declared... yes | |
| checking for nl_langinfo and CODESET... (cached) yes | |
| checking for LC_MESSAGES... yes | |
| checking for CFPreferencesCopyAppValue... (cached) no | |
| checking for CFLocaleCopyCurrent... (cached) no | |
| checking whether included gettext is requested... no | |
| checking for GNU gettext in libc... yes | |
| checking whether to use NLS... yes | |
| checking where the gettext function comes from... libc | |
| Finished configuring src/extra/intl directory | |
| using as R_SHELL for scripts ... /bin/bash | |
| configure: creating ./config.status | |
| config.status: creating Makeconf | |
| config.status: creating Makefile | |
| config.status: creating doc/Makefile | |
| config.status: creating doc/html/Makefile | |
| config.status: creating doc/manual/Makefile | |
| config.status: creating etc/Makefile | |
| config.status: creating etc/Makeconf | |
| config.status: creating etc/Renviron | |
| config.status: creating etc/javaconf | |
| config.status: creating etc/ldpaths | |
| config.status: creating m4/Makefile | |
| config.status: creating po/Makefile | |
| config.status: creating share/Makefile | |
| config.status: creating src/Makefile | |
| config.status: creating src/appl/Makefile | |
| config.status: creating src/extra/Makefile | |
| config.status: creating src/extra/blas/Makefile | |
| config.status: creating src/extra/intl/Makefile | |
| config.status: creating src/extra/tre/Makefile | |
| config.status: creating src/extra/tzone/Makefile | |
| config.status: creating src/extra/xdr/Makefile | |
| config.status: creating src/include/Makefile | |
| config.status: creating src/include/Rmath.h0 | |
| config.status: creating src/include/R_ext/Makefile | |
| config.status: creating src/library/Recommended/Makefile | |
| config.status: creating src/library/Makefile | |
| config.status: creating src/library/base/DESCRIPTION | |
| config.status: creating src/library/base/Makefile | |
| config.status: creating src/library/compiler/DESCRIPTION | |
| config.status: creating src/library/compiler/Makefile | |
| config.status: creating src/library/datasets/DESCRIPTION | |
| config.status: creating src/library/datasets/Makefile | |
| config.status: creating src/library/graphics/DESCRIPTION | |
| config.status: creating src/library/graphics/Makefile | |
| config.status: creating src/library/graphics/src/Makefile | |
| config.status: creating src/library/grDevices/DESCRIPTION | |
| config.status: creating src/library/grDevices/Makefile | |
| config.status: creating src/library/grDevices/src/Makefile | |
| config.status: creating src/library/grDevices/src/cairo/Makefile | |
| config.status: creating src/library/grid/DESCRIPTION | |
| config.status: creating src/library/grid/Makefile | |
| config.status: creating src/library/grid/src/Makefile | |
| config.status: creating src/library/methods/DESCRIPTION | |
| config.status: creating src/library/methods/Makefile | |
| config.status: creating src/library/methods/src/Makefile | |
| config.status: creating src/library/parallel/DESCRIPTION | |
| config.status: creating src/library/parallel/Makefile | |
| config.status: creating src/library/parallel/src/Makefile | |
| config.status: creating src/library/profile/Makefile | |
| config.status: creating src/library/stats/DESCRIPTION | |
| config.status: creating src/library/stats/Makefile | |
| config.status: creating src/library/stats/src/Makefile | |
| config.status: creating src/library/stats4/DESCRIPTION | |
| config.status: creating src/library/stats4/Makefile | |
| config.status: creating src/library/splines/DESCRIPTION | |
| config.status: creating src/library/splines/Makefile | |
| config.status: creating src/library/splines/src/Makefile | |
| config.status: creating src/library/tcltk/DESCRIPTION | |
| config.status: creating src/library/tcltk/Makefile | |
| config.status: creating src/library/tcltk/src/Makefile | |
| config.status: creating src/library/tools/DESCRIPTION | |
| config.status: creating src/library/tools/Makefile | |
| config.status: creating src/library/tools/src/Makefile | |
| config.status: creating src/library/translations/DESCRIPTION | |
| config.status: creating src/library/translations/Makefile | |
| config.status: creating src/library/utils/DESCRIPTION | |
| config.status: creating src/library/utils/Makefile | |
| config.status: creating src/library/utils/src/Makefile | |
| config.status: creating src/main/Makefile | |
| config.status: creating src/modules/Makefile | |
| config.status: creating src/modules/X11/Makefile | |
| config.status: creating src/modules/internet/Makefile | |
| config.status: creating src/modules/lapack/Makefile | |
| config.status: creating src/nmath/Makefile | |
| config.status: creating src/nmath/standalone/Makefile | |
| config.status: creating src/scripts/Makefile | |
| config.status: creating src/scripts/R.sh | |
| config.status: creating src/scripts/Rcmd | |
| config.status: creating src/scripts/f77_f2c | |
| config.status: creating src/scripts/javareconf | |
| config.status: creating src/scripts/mkinstalldirs | |
| config.status: creating src/scripts/pager | |
| config.status: creating src/scripts/rtags | |
| config.status: creating src/unix/Makefile | |
| config.status: creating tests/Makefile | |
| config.status: creating tests/Embedding/Makefile | |
| config.status: creating tests/Examples/Makefile | |
| config.status: creating tools/Makefile | |
| config.status: creating src/include/config.h | |
| config.status: executing libtool commands | |
| config.status: executing stamp-h commands | |
| R is now configured for x86_64-pc-linux-gnu | |
| Source directory: . | |
| Installation directory: /usr/local | |
| C compiler: gcc -g -O2 | |
| Fortran 77 compiler: f95 -g -O2 | |
| Default C++ compiler: g++ | |
| C++98 compiler: g++ -std=gnu++98 | |
| C++11 compiler: g++ -std=gnu++11 | |
| C++14 compiler: g++ | |
| Fortran 90/95 compiler: gfortran -g -O2 | |
| Obj-C compiler: | |
| Interfaces supported: X11 | |
| External libraries: readline, curl | |
| Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU | |
| Options enabled: shared BLAS, R profiling | |
| Capabilities skipped: | |
| Options not enabled: memory profiling | |
| Recommended packages: no | |
| make: Nothing to be done for 'html-non-svn'. | |
| creating FAQ | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/m4' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Nothing to be done for 'R'. | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| creating src/scripts/R.fe | |
| make[3]: Entering directory '/r-source/src/scripts' | |
| mkdir -p -- ../../bin | |
| make[3]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Entering directory '/r-source/src/include' | |
| mkdir -p -- ../../include | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| mkdir -p -- ../../../include/R_ext | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[4]: Entering directory '/r-source/src/extra/blas' | |
| f95 -fopenmp -fpic -g -O2 -c blas.f -o blas.o | |
| make[4]: Entering directory '/r-source/src/extra/tre' | |
| f95 -fopenmp -fpic -g -O2 -c cmplxblas.f -o cmplxblas.o | |
| making regcomp.d from regcomp.c | |
| making regerror.d from regerror.c | |
| making regexec.d from regexec.c | |
| making tre-ast.d from tre-ast.c | |
| making tre-compile.d from tre-compile.c | |
| making tre-match-approx.d from tre-match-approx.c | |
| making tre-match-backtrack.d from tre-match-backtrack.c | |
| making tre-match-parallel.d from tre-match-parallel.c | |
| making tre-mem.d from tre-mem.c | |
| making tre-parse.d from tre-parse.c | |
| making tre-stack.d from tre-stack.c | |
| making xmalloc.d from xmalloc.c | |
| make[4]: Leaving directory '/r-source/src/extra/tre' | |
| make[4]: Entering directory '/r-source/src/extra/tre' | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regcomp.c -o regcomp.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regerror.c -o regerror.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regexec.c -o regexec.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-ast.c -o tre-ast.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-compile.c -o tre-compile.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-approx.c -o tre-match-approx.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-backtrack.c -o tre-match-backtrack.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-parallel.c -o tre-match-parallel.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-mem.c -o tre-mem.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-parse.c -o tre-parse.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-stack.c -o tre-stack.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c xmalloc.c -o xmalloc.o | |
| ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o | |
| ranlib libtre.a | |
| make[4]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| gcc -shared -fopenmp -L/usr/local/lib64 -o libRblas.so blas.o cmplxblas.o -lgfortran -lm -lquadmath | |
| make[4]: Leaving directory '/r-source/src/extra/blas' | |
| make[4]: Entering directory '/r-source/src/extra/blas' | |
| mkdir -p -- /r-source/lib | |
| make[4]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| making integrate.d from integrate.c | |
| making optim.d from optim.c | |
| making maxcol.d from maxcol.c | |
| making interv.d from interv.c | |
| making pretty.d from pretty.c | |
| making uncmin.d from uncmin.c | |
| make[3]: Entering directory '/r-source/src/appl' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c integrate.c -o integrate.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c interv.c -o interv.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c maxcol.c -o maxcol.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c optim.c -o optim.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pretty.c -o pretty.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c uncmin.c -o uncmin.o | |
| f95 -fopenmp -g -O2 -c dchdc.f -o dchdc.o | |
| f95 -fopenmp -g -O2 -c dpbfa.f -o dpbfa.o | |
| f95 -fopenmp -g -O2 -c dpbsl.f -o dpbsl.o | |
| f95 -fopenmp -g -O2 -c dpoco.f -o dpoco.o | |
| f95 -fopenmp -g -O2 -c dpodi.f -o dpodi.o | |
| f95 -fopenmp -g -O2 -c dpofa.f -o dpofa.o | |
| f95 -fopenmp -g -O2 -c dposl.f -o dposl.o | |
| f95 -fopenmp -g -O2 -c dqrdc.f -o dqrdc.o | |
| f95 -fopenmp -g -O2 -c dqrdc2.f -o dqrdc2.o | |
| f95 -fopenmp -g -O2 -c dqrls.f -o dqrls.o | |
| f95 -fopenmp -g -O2 -c dqrsl.f -o dqrsl.o | |
| f95 -fopenmp -g -O2 -c dqrutl.f -o dqrutl.o | |
| f95 -fopenmp -g -O2 -c dsvdc.f -o dsvdc.o | |
| f95 -fopenmp -g -O2 -c dtrco.f -o dtrco.o | |
| f95 -fopenmp -g -O2 -c dtrsl.f -o dtrsl.o | |
| ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o | |
| ranlib libappl.a | |
| make[3]: Leaving directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| making mlutils.d from mlutils.c | |
| making d1mach.d from d1mach.c | |
| making fmax2.d from fmax2.c | |
| making i1mach.d from i1mach.c | |
| making fmin2.d from fmin2.c | |
| making fprec.d from fprec.c | |
| making fround.d from fround.c | |
| making ftrunc.d from ftrunc.c | |
| making fsign.d from fsign.c | |
| making imax2.d from imax2.c | |
| making imin2.d from imin2.c | |
| making sign.d from sign.c | |
| making chebyshev.d from chebyshev.c | |
| making log1p.d from log1p.c | |
| making expm1.d from expm1.c | |
| making lgammacor.d from lgammacor.c | |
| making gammalims.d from gammalims.c | |
| making stirlerr.d from stirlerr.c | |
| making bd0.d from bd0.c | |
| making lgamma.d from lgamma.c | |
| making gamma.d from gamma.c | |
| making gamma_cody.d from gamma_cody.c | |
| making beta.d from beta.c | |
| making lbeta.d from lbeta.c | |
| making polygamma.d from polygamma.c | |
| making cospi.d from cospi.c | |
| making bessel_i.d from bessel_i.c | |
| making bessel_j.d from bessel_j.c | |
| making bessel_k.d from bessel_k.c | |
| making bessel_y.d from bessel_y.c | |
| making choose.d from choose.c | |
| making snorm.d from snorm.c | |
| making sexp.d from sexp.c | |
| making dgamma.d from dgamma.c | |
| making pgamma.d from pgamma.c | |
| making qgamma.d from qgamma.c | |
| making rgamma.d from rgamma.c | |
| making dbeta.d from dbeta.c | |
| making pbeta.d from pbeta.c | |
| making qbeta.d from qbeta.c | |
| making rbeta.d from rbeta.c | |
| making dunif.d from dunif.c | |
| making punif.d from punif.c | |
| making qunif.d from qunif.c | |
| making runif.d from runif.c | |
| making dnorm.d from dnorm.c | |
| making pnorm.d from pnorm.c | |
| making qnorm.d from qnorm.c | |
| making rnorm.d from rnorm.c | |
| making dlnorm.d from dlnorm.c | |
| making plnorm.d from plnorm.c | |
| making qlnorm.d from qlnorm.c | |
| making rlnorm.d from rlnorm.c | |
| making df.d from df.c | |
| making pf.d from pf.c | |
| making qf.d from qf.c | |
| making rf.d from rf.c | |
| making dnf.d from dnf.c | |
| making dt.d from dt.c | |
| making qt.d from qt.c | |
| making pt.d from pt.c | |
| making rt.d from rt.c | |
| making dnt.d from dnt.c | |
| making dchisq.d from dchisq.c | |
| making pchisq.d from pchisq.c | |
| making qchisq.d from qchisq.c | |
| making rchisq.d from rchisq.c | |
| making rnchisq.d from rnchisq.c | |
| making dbinom.d from dbinom.c | |
| making qbinom.d from qbinom.c | |
| making pbinom.d from pbinom.c | |
| making rmultinom.d from rmultinom.c | |
| making rbinom.d from rbinom.c | |
| making dcauchy.d from dcauchy.c | |
| making pcauchy.d from pcauchy.c | |
| making qcauchy.d from qcauchy.c | |
| making rcauchy.d from rcauchy.c | |
| making dexp.d from dexp.c | |
| making pexp.d from pexp.c | |
| making qexp.d from qexp.c | |
| making rexp.d from rexp.c | |
| making dgeom.d from dgeom.c | |
| making pgeom.d from pgeom.c | |
| making rgeom.d from rgeom.c | |
| making qgeom.d from qgeom.c | |
| making phyper.d from phyper.c | |
| making dhyper.d from dhyper.c | |
| making qhyper.d from qhyper.c | |
| making rhyper.d from rhyper.c | |
| making dnbinom.d from dnbinom.c | |
| making pnbinom.d from pnbinom.c | |
| making qnbinom.d from qnbinom.c | |
| making rnbinom.d from rnbinom.c | |
| making dpois.d from dpois.c | |
| making ppois.d from ppois.c | |
| making qpois.d from qpois.c | |
| making rpois.d from rpois.c | |
| making dweibull.d from dweibull.c | |
| making pweibull.d from pweibull.c | |
| making qweibull.d from qweibull.c | |
| making rweibull.d from rweibull.c | |
| making dlogis.d from dlogis.c | |
| making plogis.d from plogis.c | |
| making qlogis.d from qlogis.c | |
| making rlogis.d from rlogis.c | |
| making dnchisq.d from dnchisq.c | |
| making pnchisq.d from pnchisq.c | |
| making qnchisq.d from qnchisq.c | |
| making dnbeta.d from dnbeta.c | |
| making qnbeta.d from qnbeta.c | |
| making pnbeta.d from pnbeta.c | |
| making pnf.d from pnf.c | |
| making qnt.d from qnt.c | |
| making qnf.d from qnf.c | |
| making pnt.d from pnt.c | |
| making ptukey.d from ptukey.c | |
| making qtukey.d from qtukey.c | |
| making wilcox.d from wilcox.c | |
| making toms708.d from toms708.c | |
| making signrank.d from signrank.c | |
| make[3]: Entering directory '/r-source/src/nmath' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c mlutils.c -o mlutils.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c d1mach.c -o d1mach.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c i1mach.c -o i1mach.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fmax2.c -o fmax2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fmin2.c -o fmin2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fprec.c -o fprec.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fround.c -o fround.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ftrunc.c -o ftrunc.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sign.c -o sign.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fsign.c -o fsign.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c imax2.c -o imax2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c imin2.c -o imin2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c chebyshev.c -o chebyshev.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c log1p.c -o log1p.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c expm1.c -o expm1.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lgammacor.c -o lgammacor.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gammalims.c -o gammalims.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c stirlerr.c -o stirlerr.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bd0.c -o bd0.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gamma.c -o gamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lgamma.c -o lgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gamma_cody.c -o gamma_cody.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c beta.c -o beta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lbeta.c -o lbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c polygamma.c -o polygamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c cospi.c -o cospi.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_i.c -o bessel_i.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_j.c -o bessel_j.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_k.c -o bessel_k.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_y.c -o bessel_y.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c choose.c -o choose.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c snorm.c -o snorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sexp.c -o sexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dgamma.c -o dgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pgamma.c -o pgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qgamma.c -o qgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rgamma.c -o rgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dbeta.c -o dbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pbeta.c -o pbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qbeta.c -o qbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rbeta.c -o rbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dunif.c -o dunif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c punif.c -o punif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qunif.c -o qunif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c runif.c -o runif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnorm.c -o dnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnorm.c -o pnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnorm.c -o qnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnorm.c -o rnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dlnorm.c -o dlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c plnorm.c -o plnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qlnorm.c -o qlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlnorm.c -o rlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c df.c -o df.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pf.c -o pf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qf.c -o qf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rf.c -o rf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnf.c -o dnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dt.c -o dt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pt.c -o pt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qt.c -o qt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rt.c -o rt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnt.c -o dnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dchisq.c -o dchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pchisq.c -o pchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qchisq.c -o qchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rchisq.c -o rchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnchisq.c -o rnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dbinom.c -o dbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pbinom.c -o pbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qbinom.c -o qbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rbinom.c -o rbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rmultinom.c -o rmultinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dcauchy.c -o dcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pcauchy.c -o pcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qcauchy.c -o qcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rcauchy.c -o rcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dexp.c -o dexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pexp.c -o pexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qexp.c -o qexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rexp.c -o rexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dgeom.c -o dgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pgeom.c -o pgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qgeom.c -o qgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rgeom.c -o rgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dhyper.c -o dhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c phyper.c -o phyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qhyper.c -o qhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rhyper.c -o rhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnbinom.c -o dnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnbinom.c -o pnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnbinom.c -o qnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnbinom.c -o rnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dpois.c -o dpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ppois.c -o ppois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qpois.c -o qpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rpois.c -o rpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dweibull.c -o dweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pweibull.c -o pweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qweibull.c -o qweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rweibull.c -o rweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dlogis.c -o dlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c plogis.c -o plogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qlogis.c -o qlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlogis.c -o rlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnchisq.c -o dnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnchisq.c -o pnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnchisq.c -o qnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnbeta.c -o dnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnbeta.c -o pnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnbeta.c -o qnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnf.c -o pnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnt.c -o pnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnf.c -o qnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnt.c -o qnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ptukey.c -o ptukey.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qtukey.c -o qtukey.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c toms708.c -o toms708.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c wilcox.c -o wilcox.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c signrank.c -o signrank.o | |
| ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o | |
| ranlib libnmath.a | |
| make[3]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| config.status: creating src/unix/Makefile | |
| making Rembedded.d from Rembedded.c | |
| making dynload.d from dynload.c | |
| making system.d from system.c | |
| making sys-unix.d from sys-unix.c | |
| making sys-std.d from sys-std.c | |
| making X11.d from X11.c | |
| make[3]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rembedded.c -o Rembedded.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dynload.c -o dynload.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c system.c -o system.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sys-unix.c -o sys-unix.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sys-std.c -o sys-std.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c X11.c -o X11.o | |
| ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o | |
| ranlib libunix.a | |
| make[3]: Leaving directory '/r-source/src/unix' | |
| make[3]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib64 -DR_HOME='"/r-source"' \ | |
| -o Rscript ./Rscript.c | |
| make[3]: Leaving directory '/r-source/src/unix' | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/main' | |
| config.status: creating src/main/Makefile | |
| making CommandLineArgs.d from CommandLineArgs.c | |
| making Rdynload.d from Rdynload.c | |
| making RNG.d from RNG.c | |
| making Renviron.d from Renviron.c | |
| making agrep.d from agrep.c | |
| making apply.d from apply.c | |
| making arithmetic.d from arithmetic.c | |
| making array.d from array.c | |
| making bind.d from bind.c | |
| making builtin.d from builtin.c | |
| making attrib.d from attrib.c | |
| making character.d from character.c | |
| making complex.d from complex.c | |
| making colors.d from colors.c | |
| making coerce.d from coerce.c | |
| making connections.d from connections.c | |
| making context.d from context.c | |
| making cum.d from cum.c | |
| making dcf.d from dcf.c | |
| making datetime.d from datetime.c | |
| making debug.d from debug.c | |
| making deparse.d from deparse.c | |
| making devices.d from devices.c | |
| making dotcode.d from dotcode.c | |
| making dounzip.d from dounzip.c | |
| making dstruct.d from dstruct.c | |
| making duplicate.d from duplicate.c | |
| making edit.d from edit.c | |
| making engine.d from engine.c | |
| making envir.d from envir.c | |
| making errors.d from errors.c | |
| making eval.d from eval.c | |
| making gevents.d from gevents.c | |
| making format.d from format.c | |
| making gram.d from gram.c | |
| making graphics.d from graphics.c | |
| making gram-ex.d from gram-ex.c | |
| making grep.d from grep.c | |
| making identical.d from identical.c | |
| making inlined.d from inlined.c | |
| making inspect.d from inspect.c | |
| making iosupport.d from iosupport.c | |
| making internet.d from internet.c | |
| making list.d from list.c | |
| making lapack.d from lapack.c | |
| making localecharset.d from localecharset.c | |
| making logic.d from logic.c | |
| making main.d from main.c | |
| making mapply.d from mapply.c | |
| making match.d from match.c | |
| making memory.d from memory.c | |
| making names.d from names.c | |
| making objects.d from objects.c | |
| making options.d from options.c | |
| making paste.d from paste.c | |
| making platform.d from platform.c | |
| making plot3d.d from plot3d.c | |
| making plot.d from plot.c | |
| making plotmath.d from plotmath.c | |
| making print.d from print.c | |
| making printarray.d from printarray.c | |
| making printvector.d from printvector.c | |
| making printutils.d from printutils.c | |
| making qsort.d from qsort.c | |
| making radixsort.d from radixsort.c | |
| making random.d from random.c | |
| making raw.d from raw.c | |
| making registration.d from registration.c | |
| making relop.d from relop.c | |
| making rlocale.d from rlocale.c | |
| making saveload.d from saveload.c | |
| making scan.d from scan.c | |
| making seq.d from seq.c | |
| making serialize.d from serialize.c | |
| making sort.d from sort.c | |
| making source.d from source.c | |
| making split.d from split.c | |
| making sprintf.d from sprintf.c | |
| making startup.d from startup.c | |
| making subassign.d from subassign.c | |
| making subscript.d from subscript.c | |
| making subset.d from subset.c | |
| making summary.d from summary.c | |
| making times.d from times.c | |
| making sysutils.d from sysutils.c | |
| making unique.d from unique.c | |
| making util.d from util.c | |
| making version.d from version.c | |
| making g_alab_her.d from g_alab_her.c | |
| making g_cntrlify.d from g_cntrlify.c | |
| making g_fontdb.d from g_fontdb.c | |
| making g_her_glyph.d from g_her_glyph.c | |
| making Rmain.d from Rmain.c | |
| making alloca.d from alloca.c | |
| making mkdtemp.d from mkdtemp.c | |
| making strdup.d from strdup.c | |
| making strncasecmp.d from strncasecmp.c | |
| make[3]: Entering directory '/r-source/src/main' | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rmain.c -o Rmain.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c CommandLineArgs.c -o CommandLineArgs.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rdynload.c -o Rdynload.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Renviron.c -o Renviron.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c RNG.c -o RNG.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c agrep.c -o agrep.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c apply.c -o apply.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c arithmetic.c -o arithmetic.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c array.c -o array.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c attrib.c -o attrib.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c bind.c -o bind.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c builtin.c -o builtin.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c character.c -o character.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c coerce.c -o coerce.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c colors.c -o colors.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c complex.c -o complex.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c connections.c -o connections.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c context.c -o context.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c cum.c -o cum.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dcf.c -o dcf.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c datetime.c -o datetime.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c debug.c -o debug.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c deparse.c -o deparse.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c devices.c -o devices.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dotcode.c -o dotcode.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dounzip.c -o dounzip.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dstruct.c -o dstruct.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c duplicate.c -o duplicate.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c edit.c -o edit.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c engine.c -o engine.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c envir.c -o envir.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c errors.c -o errors.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c eval.c -o eval.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c format.c -o format.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gevents.c -o gevents.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gram.c -o gram.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gram-ex.c -o gram-ex.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c graphics.c -o graphics.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c grep.c -o grep.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c identical.c -o identical.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c inlined.c -o inlined.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c inspect.c -o inspect.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c internet.c -o internet.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c iosupport.c -o iosupport.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c lapack.c -o lapack.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c list.c -o list.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c localecharset.c -o localecharset.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c logic.c -o logic.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c main.c -o main.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c mapply.c -o mapply.o | |
| [01m[Kmain.c:[m[K In function ‘[01m[Kdummy_ii[m[K’: | |
| [01m[Kmain.c:1666:12:[m[K [01;35m[Kwarning: [m[Kfunction returns address of local variable [[01;35m[K-Wreturn-local-addr[m[K] | |
| return [01;35m[K(uintptr_t) &ii[m[K; | |
| [01;35m[K^~~~~~~~~~~~~~~[m[K | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c match.c -o match.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c memory.c -o memory.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c names.c -o names.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c objects.c -o objects.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c options.c -o options.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c paste.c -o paste.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c platform.c -o platform.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plot.c -o plot.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plot3d.c -o plot3d.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plotmath.c -o plotmath.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c print.c -o print.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printarray.c -o printarray.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printvector.c -o printvector.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printutils.c -o printutils.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c qsort.c -o qsort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c radixsort.c -o radixsort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c random.c -o random.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c raw.c -o raw.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c registration.c -o registration.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c relop.c -o relop.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlocale.c -o rlocale.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c saveload.c -o saveload.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c scan.c -o scan.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c seq.c -o seq.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c serialize.c -o serialize.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sort.c -o sort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c source.c -o source.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c split.c -o split.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sprintf.c -o sprintf.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c startup.c -o startup.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subassign.c -o subassign.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subscript.c -o subscript.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subset.c -o subset.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c summary.c -o summary.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sysutils.c -o sysutils.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c times.c -o times.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c unique.c -o unique.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c util.c -o util.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c version.c -o version.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_alab_her.c -o g_alab_her.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_cntrlify.c -o g_cntrlify.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_fontdb.c -o g_fontdb.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_her_glyph.c -o g_her_glyph.o | |
| f95 -fopenmp -g -O2 -c xxxpr.f -o xxxpr.o | |
| ar -cr libR.a CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o libs/*o | |
| ranlib libR.a | |
| gcc -Wl,--export-dynamic -fopenmp -L/usr/local/lib64 -o R.bin Rmain.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -L../../lib -lRblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n | |
| make[4]: Entering directory '/r-source/src/main' | |
| mkdir -p -- /r-source/bin/exec | |
| make[4]: Leaving directory '/r-source/src/main' | |
| make[3]: Leaving directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| making devX11.d from devX11.c | |
| making Rhttpd.d from Rhttpd.c | |
| making Lapack.d from Lapack.c | |
| making Rsock.d from Rsock.c | |
| making rotated.d from rotated.c | |
| make[4]: Entering directory '/r-source/src/modules/lapack' | |
| f95 -fpic -g -O2 -ffloat-store -c dlamch.f -o dlamch.o | |
| making internet.d from internet.c | |
| making rbitmap.d from rbitmap.c | |
| f95 -fopenmp -fpic -g -O2 -c dlapack.f -o dlapack.o | |
| making libcurl.d from libcurl.c | |
| f95 -fopenmp -fpic -g -O2 -c cmplx.f -o cmplx.o | |
| making nanoftp.d from nanoftp.c | |
| make[4]: Entering directory '/r-source/src/modules/X11' | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c devX11.c -o devX11.o | |
| making nanohttp.d from nanohttp.c | |
| making sock.d from sock.c | |
| making sockconn.d from sockconn.c | |
| make[4]: Entering directory '/r-source/src/modules/internet' | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rsock.c -o Rsock.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c internet.c -o internet.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c libcurl.c -o libcurl.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rotated.c -o rotated.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanoftp.c -o nanoftp.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanohttp.c -o nanohttp.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rbitmap.c -o rbitmap.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sock.c -o sock.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dataentry.c -o dataentry.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sockconn.c -o sockconn.o | |
| gcc -shared -L/usr/local/lib64 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl | |
| make[5]: Entering directory '/r-source/src/modules/internet' | |
| mkdir -p -- /r-source/modules | |
| make[5]: Leaving directory '/r-source/src/modules/internet' | |
| make[4]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| gcc -shared -L/usr/local/lib64 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lm | |
| gcc -shared -L/usr/local/lib64 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lm | |
| make[4]: Leaving directory '/r-source/src/modules/X11' | |
| make[4]: Entering directory '/r-source/src/modules/X11' | |
| make[4]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| gcc -shared -fopenmp -L/usr/local/lib64 -o libRlapack.so dlamch.o dlapack.o cmplx.o -L../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[4]: Leaving directory '/r-source/src/modules/lapack' | |
| make[4]: Entering directory '/r-source/src/modules/lapack' | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Lapack.c -o Lapack.o | |
| gcc -shared -L/usr/local/lib64 -o lapack.so Lapack.o -L../../../lib -lRlapack -L../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[5]: Entering directory '/r-source/src/modules/lapack' | |
| /r-source/lib/libRlapack.so is unchanged | |
| make[5]: Leaving directory '/r-source/src/modules/lapack' | |
| make[4]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/library' | |
| mkdir -p -- ../../library | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| building system startup profile | |
| mkdir -p -- ../../../library/base/R | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| building package 'translations' | |
| mkdir -p -- ../../../library/translations | |
| make[4]: Entering directory '/r-source/src/library/translations' | |
| make[4]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| building package 'base' | |
| make[4]: Entering directory '/r-source/src/library/base' | |
| mkdir -p -- ../../../library/base/demo | |
| make[4]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| building package 'tools' | |
| mkdir -p -- ../../../library/tools | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| mkdir -p -- ../../../library/tools/R | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| make[5]: Entering directory '/r-source/src/library/tools/src' | |
| making text.d from text.c | |
| making init.d from init.c | |
| making Rmd5.d from Rmd5.c | |
| making md5.d from md5.c | |
| making signals.d from signals.c | |
| making install.d from install.c | |
| making getfmts.d from getfmts.c | |
| making http.d from http.c | |
| making gramLatex.d from gramLatex.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c text.c -o text.o | |
| making gramRd.d from gramRd.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c Rmd5.c -o Rmd5.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c md5.c -o md5.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c signals.c -o signals.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c install.c -o install.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getfmts.c -o getfmts.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c http.c -o http.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gramLatex.c -o gramLatex.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gramRd.c -o gramRd.o | |
| gcc -shared -L/usr/local/lib64 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o | |
| make[6]: Entering directory '/r-source/src/library/tools/src' | |
| mkdir -p -- ../../../../library/tools/libs | |
| make[6]: Leaving directory '/r-source/src/library/tools/src' | |
| make[5]: Leaving directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| installing 'sysdata.rda' | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| building package 'compiler' | |
| mkdir -p -- ../../../library/compiler | |
| make[4]: Entering directory '/r-source/src/library/compiler' | |
| mkdir -p -- ../../../library/compiler/R | |
| make[4]: Leaving directory '/r-source/src/library/compiler' | |
| make[4]: Entering directory '/r-source/src/library/compiler' | |
| byte-compiling package 'compiler' | |
| make[4]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| byte-compiling package 'base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| byte-compiling package 'tools' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| building package 'utils' | |
| mkdir -p -- ../../../library/utils | |
| mkdir -p -- ../../../library/utils/doc | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| mkdir -p -- ../../../library/utils/R | |
| mkdir -p -- ../../../library/utils/Sweave | |
| mkdir -p -- ../../../library/utils/misc | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| make[5]: Entering directory '/r-source/src/library/utils/src' | |
| making init.d from init.c | |
| making io.d from io.c | |
| making sock.d from sock.c | |
| making size.d from size.c | |
| making stubs.d from stubs.c | |
| making utils.d from utils.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c io.c -o io.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c sock.c -o sock.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stubs.c -o stubs.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o utils.so init.o io.o size.o sock.o stubs.o utils.o | |
| make[6]: Entering directory '/r-source/src/library/utils/src' | |
| mkdir -p -- ../../../../library/utils/libs | |
| make[6]: Leaving directory '/r-source/src/library/utils/src' | |
| make[5]: Leaving directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| installing 'sysdata.rda' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| byte-compiling package 'utils' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| building package 'grDevices' | |
| mkdir -p -- ../../../library/grDevices | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| mkdir -p -- ../../../library/grDevices/R | |
| mkdir -p -- ../../../library/grDevices/afm | |
| mkdir -p -- ../../../library/grDevices/enc | |
| mkdir -p -- ../../../library/grDevices/icc | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src' | |
| making axis_scales.d from axis_scales.c | |
| making chull.d from chull.c | |
| making devices.d from devices.c | |
| making init.d from init.c | |
| making stubs.d from stubs.c | |
| making devCairo.d from devCairo.c | |
| making colors.d from colors.c | |
| making devPicTeX.d from devPicTeX.c | |
| making devPS.d from devPS.c | |
| making devQuartz.d from devQuartz.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c axis_scales.c -o axis_scales.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c chull.c -o chull.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devices.c -o devices.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c stubs.c -o stubs.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c colors.c -o colors.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devCairo.c -o devCairo.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devPicTeX.c -o devPicTeX.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devPS.c -o devPS.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devQuartz.c -o devQuartz.o | |
| gcc -shared -L/usr/local/lib64 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz | |
| make[6]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[7]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| mkdir -p -- ../../../../library/grDevices/libs | |
| making cairoBM.d from cairoBM.c | |
| make[8]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[9]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c cairoBM.c -o cairoBM.o | |
| gcc -shared -L/usr/local/lib64 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lm | |
| make[9]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[8]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[7]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[6]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| byte-compiling package 'grDevices' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| building package 'graphics' | |
| mkdir -p -- ../../../library/graphics | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| mkdir -p -- ../../../library/graphics/R | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| make[5]: Entering directory '/r-source/src/library/graphics/src' | |
| making init.d from init.c | |
| making base.d from base.c | |
| making graphics.d from graphics.c | |
| making par.d from par.c | |
| making plot.d from plot.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making stem.d from stem.c | |
| making plot3d.d from plot3d.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base.c -o base.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c graphics.c -o graphics.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c par.c -o par.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c plot.c -o plot.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c plot3d.c -o plot3d.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stem.c -o stem.o | |
| gcc -shared -L/usr/local/lib64 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o | |
| make[6]: Entering directory '/r-source/src/library/graphics/src' | |
| mkdir -p -- ../../../../library/graphics/libs | |
| make[6]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[5]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| byte-compiling package 'graphics' | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| building package 'stats' | |
| mkdir -p -- ../../../library/stats | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| mkdir -p -- ../../../library/stats/R | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| make[5]: Entering directory '/r-source/src/library/stats/src' | |
| making init.d from init.c | |
| making kmeans.d from kmeans.c | |
| making ansari.d from ansari.c | |
| making bandwidths.d from bandwidths.c | |
| making chisqsim.d from chisqsim.c | |
| making d2x2xk.d from d2x2xk.c | |
| making fexact.d from fexact.c | |
| making kendall.d from kendall.c | |
| making ks.d from ks.c | |
| making line.d from line.c | |
| making smooth.d from smooth.c | |
| making prho.d from prho.c | |
| making swilk.d from swilk.c | |
| making ksmooth.d from ksmooth.c | |
| making monoSpl.d from monoSpl.c | |
| making loessc.d from loessc.c | |
| making isoreg.d from isoreg.c | |
| making dblcen.d from dblcen.c | |
| making Srunmed.d from Srunmed.c | |
| making distance.d from distance.c | |
| making hclust-utils.d from hclust-utils.c | |
| making nls.d from nls.c | |
| making rWishart.d from rWishart.c | |
| making HoltWinters.d from HoltWinters.c | |
| making PPsum.d from PPsum.c | |
| making arima.d from arima.c | |
| making burg.d from burg.c | |
| making filter.d from filter.c | |
| making mAR.d from mAR.c | |
| making pacf.d from pacf.c | |
| making starma.d from starma.c | |
| making port.d from port.c | |
| making family.d from family.c | |
| making sbart.d from sbart.c | |
| making approx.d from approx.c | |
| making loglin.d from loglin.c | |
| making lowess.d from lowess.c | |
| making massdist.d from massdist.c | |
| making splines.d from splines.c | |
| making lm.d from lm.c | |
| making complete_cases.d from complete_cases.c | |
| making cov.d from cov.c | |
| making deriv.d from deriv.c | |
| making fft.d from fft.c | |
| making fourier.d from fourier.c | |
| making model.d from model.c | |
| making optim.d from optim.c | |
| making optimize.d from optimize.c | |
| making integrate.d from integrate.c | |
| making random.d from random.c | |
| making distn.d from distn.c | |
| making zeroin.d from zeroin.c | |
| making rcont.d from rcont.c | |
| making influence.d from influence.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c kmeans.c -o kmeans.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ansari.c -o ansari.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c bandwidths.c -o bandwidths.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c chisqsim.c -o chisqsim.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c d2x2xk.c -o d2x2xk.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fexact.c -o fexact.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c kendall.c -o kendall.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ks.c -o ks.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c line.c -o line.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c smooth.c -o smooth.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c prho.c -o prho.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c swilk.c -o swilk.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ksmooth.c -o ksmooth.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c loessc.c -o loessc.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c monoSpl.c -o monoSpl.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c isoreg.c -o isoreg.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c Srunmed.c -o Srunmed.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c dblcen.c -o dblcen.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c distance.c -o distance.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c hclust-utils.c -o hclust-utils.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c nls.c -o nls.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c rWishart.c -o rWishart.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c HoltWinters.c -o HoltWinters.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c PPsum.c -o PPsum.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c arima.c -o arima.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c burg.c -o burg.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c filter.c -o filter.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c mAR.c -o mAR.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c pacf.c -o pacf.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c starma.c -o starma.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c port.c -o port.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c family.c -o family.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c sbart.c -o sbart.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c approx.c -o approx.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c loglin.c -o loglin.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c lowess.c -o lowess.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c massdist.c -o massdist.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c splines.c -o splines.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c lm.c -o lm.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c complete_cases.c -o complete_cases.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c cov.c -o cov.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c deriv.c -o deriv.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fft.c -o fft.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fourier.c -o fourier.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c model.c -o model.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c optim.c -o optim.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c optimize.c -o optimize.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c integrate.c -o integrate.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c random.c -o random.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c distn.c -o distn.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c zeroin.c -o zeroin.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c rcont.c -o rcont.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c influence.c -o influence.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bsplvd.f -o bsplvd.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bvalue.f -o bvalue.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bvalus.f -o bvalus.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c loessf.f -o loessf.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c ppr.f -o ppr.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c qsbart.f -o qsbart.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sgram.f -o sgram.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sinerp.f -o sinerp.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sslvrg.f -o sslvrg.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c stxwx.f -o stxwx.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c hclust.f -o hclust.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c kmns.f -o kmns.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c eureka.f -o eureka.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c stl.f -o stl.o | |
| f95 -fpic -g -O2 -ffloat-store -c portsrc.f -o portsrc.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c lminfl.f -o lminfl.o | |
| gcc -shared -L/usr/local/lib64 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -L../../../../lib -lRlapack -L../../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[6]: Entering directory '/r-source/src/library/stats/src' | |
| mkdir -p -- ../../../../library/stats/libs | |
| make[6]: Leaving directory '/r-source/src/library/stats/src' | |
| make[5]: Leaving directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| byte-compiling package 'stats' | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| building package 'datasets' | |
| mkdir -p -- ../../../library/datasets | |
| make[4]: Entering directory '/r-source/src/library/datasets' | |
| make[4]: Leaving directory '/r-source/src/library/datasets' | |
| mkdir -p -- ../../../library/datasets/data | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| building package 'methods' | |
| mkdir -p -- ../../../library/methods | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| mkdir -p -- ../../../library/methods/R | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| make[5]: Entering directory '/r-source/src/library/methods/src' | |
| making do_substitute_direct.d from do_substitute_direct.c | |
| making init.d from init.c | |
| making methods_list_dispatch.d from methods_list_dispatch.c | |
| making slot.d from slot.c | |
| making class_support.d from class_support.c | |
| making tests.d from tests.c | |
| making utils.d from utils.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c do_substitute_direct.c -o do_substitute_direct.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c methods_list_dispatch.c -o methods_list_dispatch.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slot.c -o slot.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c class_support.c -o class_support.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tests.c -o tests.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o | |
| make[6]: Entering directory '/r-source/src/library/methods/src' | |
| mkdir -p -- ../../../../library/methods/libs | |
| make[6]: Leaving directory '/r-source/src/library/methods/src' | |
| make[5]: Leaving directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| byte-compiling 'methods' | |
| initializing class and method definitions ... done | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| building package 'grid' | |
| mkdir -p -- ../../../library/grid | |
| mkdir -p -- ../../../library/grid/doc | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| mkdir -p -- ../../../library/grid/R | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| make[5]: Entering directory '/r-source/src/library/grid/src' | |
| making gpar.d from gpar.c | |
| making grid.d from grid.c | |
| making just.d from just.c | |
| making layout.d from layout.c | |
| making state.d from state.c | |
| making register.d from register.c | |
| making matrix.d from matrix.c | |
| making unit.d from unit.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gpar.c -o gpar.o | |
| making util.d from util.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c grid.c -o grid.o | |
| making viewport.d from viewport.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c just.c -o just.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c layout.c -o layout.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c matrix.c -o matrix.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c state.c -o state.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unit.c -o unit.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c util.c -o util.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c viewport.c -o viewport.o | |
| gcc -shared -L/usr/local/lib64 -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o | |
| make[6]: Entering directory '/r-source/src/library/grid/src' | |
| mkdir -p -- ../../../../library/grid/libs | |
| make[6]: Leaving directory '/r-source/src/library/grid/src' | |
| make[5]: Leaving directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| byte-compiling package 'grid' | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| building package 'splines' | |
| mkdir -p -- ../../../library/splines | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| mkdir -p -- ../../../library/splines/R | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| make[5]: Entering directory '/r-source/src/library/splines/src' | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c splines.c -o splines.o | |
| making splines.d from splines.c | |
| gcc -shared -L/usr/local/lib64 -o splines.so splines.o | |
| make[6]: Entering directory '/r-source/src/library/splines/src' | |
| mkdir -p -- ../../../../library/splines/libs | |
| make[6]: Leaving directory '/r-source/src/library/splines/src' | |
| make[5]: Leaving directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| byte-compiling package 'splines' | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| building package 'stats4' | |
| mkdir -p -- ../../../library/stats4 | |
| make[4]: Entering directory '/r-source/src/library/stats4' | |
| mkdir -p -- ../../../library/stats4/R | |
| make[4]: Leaving directory '/r-source/src/library/stats4' | |
| make[4]: Entering directory '/r-source/src/library/stats4' | |
| byte-compiling package 'stats4' | |
| make[4]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| building package 'tcltk' | |
| mkdir -p -- ../../../library/tcltk/R | |
| make[4]: Entering directory '/r-source/src/library/tcltk' | |
| mkdir -p -- ../../../library/tcltk/exec | |
| make[4]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| building package 'parallel' | |
| mkdir -p -- ../../../library/parallel | |
| mkdir -p -- ../../../library/parallel/doc | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| mkdir -p -- ../../../library/parallel/R | |
| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| make[5]: Entering directory '/r-source/src/library/parallel/src' | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making init.d from init.c | |
| making fork.d from fork.c | |
| making rngstream.d from rngstream.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rngstream.c -o rngstream.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fork.c -o fork.o | |
| gcc -shared -L/usr/local/lib64 -o parallel.so init.o rngstream.o fork.o | |
| make[6]: Entering directory '/r-source/src/library/parallel/src' | |
| mkdir -p -- ../../../../library/parallel/libs | |
| make[6]: Leaving directory '/r-source/src/library/parallel/src' | |
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| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| byte-compiling package 'parallel' | |
| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| installing parsed NAMESPACE files | |
| make[2]: Leaving directory '/r-source/src/library' | |
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| make[1]: Entering directory '/r-source/tests' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/tests' | |
| you should 'make docs' now ... | |
| make[1]: Entering directory '/r-source' | |
| make[1]: Entering directory '/r-source/doc' | |
| configuring Java ... | |
| Java interpreter : /usr/bin/java | |
| Java version : 1.8.0_121 | |
| Java home path : /usr/lib/jvm/java-8-openjdk-amd64/jre | |
| Java compiler : /usr/bin/javac | |
| Java headers gen.: /usr/bin/javah | |
| Java archive tool: /usr/bin/jar | |
| trying to compile and link a JNI program | |
| detected JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux | |
| detected JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm | |
| make[2]: Entering directory '/tmp/Rjavareconf.dMGX0x' | |
| gcc -I/r-source/include -DNDEBUG -I/usr/lib/jvm/java-8-openjdk-amd64/jre/../include -I/usr/lib/jvm/java-8-openjdk-amd64/jre/../include/linux -I/usr/local/include -fpic -g -O2 -c conftest.c -o conftest.o | |
| gcc -shared -L/usr/local/lib64 -o conftest.so conftest.o -L/usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server -ljvm | |
| make[2]: Leaving directory '/tmp/Rjavareconf.dMGX0x' | |
| JAVA_HOME : /usr/lib/jvm/java-8-openjdk-amd64/jre | |
| Java library path: $(JAVA_HOME)/lib/amd64/server | |
| JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux | |
| JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm | |
| Updating Java configuration in /r-source | |
| Done. | |
| make[1]: Leaving directory '/r-source' | |
| creating doc/NEWS | |
| creating doc/NEWS.pdf | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| creating doc/manual/R-FAQ.html | |
| creating doc/manual/version.texi | |
| creating doc/manual/R-admin.html | |
| creating doc/manual/R-data.html | |
| creating doc/manual/R-exts.html | |
| creating doc/manual/R-intro.html | |
| creating doc/manual/R-ints.html | |
| creating doc/manual/R-lang.html | |
| make[3]: Entering directory '/r-source/doc/html' | |
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| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/library' | |
| installing parsed Rd | |
| make[3]: Entering directory '/r-source/src/library' | |
| methods | |
| utils | |
| graphics | |
| grDevices | |
| datasets | |
| grid | |
| tcltk | |
| tools | |
| splines | |
| compiler | |
| stats4 | |
| stats | |
| parallel | |
| base | |
| make[3]: Leaving directory '/r-source/src/library' | |
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| building/updating package metadata ... | |
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| writing package indices | |
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| make[1]: Nothing to be done for 'all'. | |
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| make[1]: Entering directory '/r-source/src/library' | |
| building/updating vignettes for package 'grid' ... | |
| processing 'displaylist.Rnw' | |
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| building/updating vignettes for package 'parallel' ... | |
| processing 'parallel.Rnw' | |
| building/updating vignettes for package 'utils' ... | |
| processing 'Sweave.Rnw' | |
| make[1]: Leaving directory '/r-source/src/library' | |
| mkdir -p -- /usr/local/lib64/R | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'install'. | |
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| make[1]: Entering directory '/r-source/doc' | |
| installing doc ... | |
| mkdir -p -- /usr/local/lib64/R/doc | |
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| installing doc/html ... | |
| mkdir -p -- /usr/local/lib64/R/doc/html | |
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| installing doc/manual ... | |
| mkdir -p -- /usr/local/lib64/R/doc/manual | |
| mkdir -p -- /usr/local/lib64/R/doc/manual/images | |
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| make[1]: Entering directory '/r-source/etc' | |
| mkdir -p -- /usr/local/lib64/R/etc | |
| installing etc ... | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/share' | |
| installing share ... | |
| mkdir -p -- /usr/local/lib64/R/share | |
| mkdir -p -- /usr/local/lib64/R/share/R | |
| mkdir -p -- /usr/local/lib64/R/share/dictionaries | |
| mkdir -p -- /usr/local/lib64/R/share/encodings | |
| mkdir -p -- /usr/local/lib64/R/share/java | |
| mkdir -p -- /usr/local/lib64/R/share/licenses | |
| mkdir -p -- /usr/local/lib64/R/share/make | |
| mkdir -p -- /usr/local/lib64/R/share/Rd | |
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| mkdir -p -- /usr/local/lib64/R/share/sh | |
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| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| mkdir -p -- /usr/local/lib64/R/lib | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Nothing to be done for 'install'. | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Nothing to be done for 'install'. | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Nothing to be done for 'install'. | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Nothing to be done for 'install'. | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[2]: Nothing to be done for 'install'. | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib64 -DR_HOME='"/usr/local/lib64/R"' \ | |
| -o Rscript ./Rscript.c | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/main' | |
| mkdir -p -- /usr/local/lib64/R/bin/exec | |
| make[3]: Entering directory '/r-source/src/main' | |
| make[3]: Leaving directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| mkdir -p -- /usr/local/lib64/R/modules | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/library' | |
| mkdir -p -- /usr/local/lib64/R/library | |
| installing packages ... | |
| building HTML index ... | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/tests' | |
| make[1]: Nothing to be done for 'install'. | |
| make[1]: Leaving directory '/r-source/tests' | |
| make[1]: Entering directory '/r-source/tests' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
| make[2]: Leaving directory '/r-source/tests/Embedding' | |
| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[1]: Leaving directory '/r-source/tests' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/library' | |
| make[3]: Entering directory '/r-source/src/library/Recommended' | |
| make[3]: Leaving directory '/r-source/src/library/Recommended' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[3]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| make[3]: Nothing to be done for 'clean'. | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/include' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'clean'. | |
| make[1]: Leaving directory '/r-source/m4' | |
| make[1]: Entering directory '/r-source/tests' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
| make[2]: Leaving directory '/r-source/tests/Embedding' | |
| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
| make[2]: Leaving directory '/r-source/tests/Embedding' | |
| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[1]: Leaving directory '/r-source/tests' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/library' | |
| make[3]: Entering directory '/r-source/src/library/Recommended' | |
| make[3]: Leaving directory '/r-source/src/library/Recommended' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[3]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/main' | |
| (cd ../include; make Rversion.h) | |
| make[3]: Entering directory '/r-source/src/include' | |
| make[3]: Leaving directory '/r-source/src/include' | |
| config.status: creating src/main/Makefile | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| config.status: creating src/unix/Makefile | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/include' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Leaving directory '/r-source/m4' | |
| R Under development (unstable) (2016-09-28 r71397) -- "Unsuffered Consequences" | |
| Copyright (C) 2016 The R Foundation for Statistical Computing | |
| Platform: x86_64-pc-linux-gnu (64-bit) | |
| R is free software and comes with ABSOLUTELY NO WARRANTY. | |
| You are welcome to redistribute it under certain conditions. | |
| Type 'license()' or 'licence()' for distribution details. | |
| Natural language support but running in an English locale | |
| R is a collaborative project with many contributors. | |
| Type 'contributors()' for more information and | |
| 'citation()' on how to cite R or R packages in publications. | |
| Type 'demo()' for some demos, 'help()' for on-line help, or | |
| 'help.start()' for an HTML browser interface to help. | |
| Type 'q()' to quit R. | |
| > install.packages(c('devtools', 'roxygen2', 'testthat', 'Rcpp', 'knitr', 'rmarkdown', 'dplyr', 'RMySQL', 'RSQLite', 'RPostgreSQL'), repos = c(CRAN='https://cloud.r-project.org'), Ncpus=4) | |
| also installing the dependencies ‘mime’, ‘curl’, ‘openssl’, ‘bitops’, ‘backports’, ‘httr’, ‘memoise’, ‘whisker’, ‘digest’, ‘rstudioapi’, ‘jsonlite’, ‘git2r’, ‘withr’, ‘stringr’, ‘stringi’, ‘brew’, ‘R6’, ‘desc’, ‘commonmark’, ‘xml2’, ‘crayon’, ‘praise’, ‘magrittr’, ‘evaluate’, ‘highr’, ‘markdown’, ‘yaml’, ‘htmltools’, ‘caTools’, ‘base64enc’, ‘rprojroot’, ‘assertthat’, ‘tibble’, ‘lazyeval’, ‘DBI’, ‘BH’, ‘plogr’ | |
| trying URL 'https://cloud.r-project.org/src/contrib/mime_0.5.tar.gz' | |
| Content type 'application/x-gzip' length 12634 bytes (12 KB) | |
| ================================================== | |
| downloaded 12 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/curl_2.4.tar.gz' | |
| Content type 'application/x-gzip' length 403058 bytes (393 KB) | |
| ================================================== | |
| downloaded 393 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/openssl_0.9.6.tar.gz' | |
| Content type 'application/x-gzip' length 1239339 bytes (1.2 MB) | |
| ================================================== | |
| downloaded 1.2 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/bitops_1.0-6.tar.gz' | |
| Content type 'application/x-gzip' length 8734 bytes | |
| ================================================== | |
| downloaded 8734 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/backports_1.0.5.tar.gz' | |
| Content type 'application/x-gzip' length 6869 bytes | |
| ================================================== | |
| downloaded 6869 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/httr_1.2.1.tar.gz' | |
| Content type 'application/x-gzip' length 133398 bytes (130 KB) | |
| ================================================== | |
| downloaded 130 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/memoise_1.0.0.tar.gz' | |
| Content type 'application/x-gzip' length 7931 bytes | |
| ================================================== | |
| downloaded 7931 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/whisker_0.3-2.tar.gz' | |
| Content type 'application/x-gzip' length 27707 bytes (27 KB) | |
| ================================================== | |
| downloaded 27 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/digest_0.6.12.tar.gz' | |
| Content type 'application/x-gzip' length 120337 bytes (117 KB) | |
| ================================================== | |
| downloaded 117 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/rstudioapi_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 12024 bytes (11 KB) | |
| ================================================== | |
| downloaded 11 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/jsonlite_1.3.tar.gz' | |
| Content type 'application/x-gzip' length 1060613 bytes (1.0 MB) | |
| ================================================== | |
| downloaded 1.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/git2r_0.18.0.tar.gz' | |
| Content type 'application/x-gzip' length 1122935 bytes (1.1 MB) | |
| ================================================== | |
| downloaded 1.1 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/withr_1.0.2.tar.gz' | |
| Content type 'application/x-gzip' length 11976 bytes (11 KB) | |
| ================================================== | |
| downloaded 11 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/stringr_1.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 94095 bytes (91 KB) | |
| ================================================== | |
| downloaded 91 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/stringi_1.1.3.tar.gz' | |
| Content type 'application/x-gzip' length 3644529 bytes (3.5 MB) | |
| ================================================== | |
| downloaded 3.5 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/brew_1.0-6.tar.gz' | |
| Content type 'application/x-gzip' length 83315 bytes (81 KB) | |
| ================================================== | |
| downloaded 81 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/R6_2.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 203498 bytes (198 KB) | |
| ================================================== | |
| downloaded 198 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/desc_1.1.0.tar.gz' | |
| Content type 'application/x-gzip' length 59568 bytes (58 KB) | |
| ================================================== | |
| downloaded 58 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/commonmark_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 124270 bytes (121 KB) | |
| ================================================== | |
| downloaded 121 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/xml2_1.1.1.tar.gz' | |
| Content type 'application/x-gzip' length 244643 bytes (238 KB) | |
| ================================================== | |
| downloaded 238 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/crayon_1.3.2.tar.gz' | |
| Content type 'application/x-gzip' length 656168 bytes (640 KB) | |
| ================================================== | |
| downloaded 640 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/praise_1.0.0.tar.gz' | |
| Content type 'application/x-gzip' length 6100 bytes | |
| ================================================== | |
| downloaded 6100 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/magrittr_1.5.tar.gz' | |
| Content type 'application/x-gzip' length 200504 bytes (195 KB) | |
| ================================================== | |
| downloaded 195 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/evaluate_0.10.tar.gz' | |
| Content type 'application/x-gzip' length 21914 bytes (21 KB) | |
| ================================================== | |
| downloaded 21 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/highr_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 17294 bytes (16 KB) | |
| ================================================== | |
| downloaded 16 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/markdown_0.7.7.tar.gz' | |
| Content type 'application/x-gzip' length 79427 bytes (77 KB) | |
| ================================================== | |
| downloaded 77 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/yaml_2.1.14.tar.gz' | |
| Content type 'application/x-gzip' length 81095 bytes (79 KB) | |
| ================================================== | |
| downloaded 79 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/htmltools_0.3.5.tar.gz' | |
| Content type 'application/x-gzip' length 44048 bytes (43 KB) | |
| ================================================== | |
| downloaded 43 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/caTools_1.17.1.tar.gz' | |
| Content type 'application/x-gzip' length 63358 bytes (61 KB) | |
| ================================================== | |
| downloaded 61 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/base64enc_0.1-3.tar.gz' | |
| Content type 'application/x-gzip' length 7833 bytes | |
| ================================================== | |
| downloaded 7833 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/rprojroot_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 42063 bytes (41 KB) | |
| ================================================== | |
| downloaded 41 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/assertthat_0.1.tar.gz' | |
| Content type 'application/x-gzip' length 10187 bytes | |
| ================================================== | |
| downloaded 10187 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/tibble_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 54517 bytes (53 KB) | |
| ================================================== | |
| downloaded 53 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/lazyeval_0.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 317272 bytes (309 KB) | |
| ================================================== | |
| downloaded 309 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/DBI_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 611282 bytes (596 KB) | |
| ================================================== | |
| downloaded 596 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/BH_1.62.0-1.tar.gz' | |
| Content type 'application/x-gzip' length 10181096 bytes (9.7 MB) | |
| ================================================== | |
| downloaded 9.7 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/plogr_0.1-1.tar.gz' | |
| Content type 'application/x-gzip' length 7421 bytes | |
| ================================================== | |
| downloaded 7421 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/devtools_1.12.0.tar.gz' | |
| Content type 'application/x-gzip' length 466618 bytes (455 KB) | |
| ================================================== | |
| downloaded 455 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/roxygen2_6.0.1.tar.gz' | |
| Content type 'application/x-gzip' length 150580 bytes (147 KB) | |
| ================================================== | |
| downloaded 147 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/testthat_1.0.2.tar.gz' | |
| Content type 'application/x-gzip' length 147298 bytes (143 KB) | |
| ================================================== | |
| downloaded 143 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/Rcpp_0.12.10.tar.gz' | |
| Content type 'application/x-gzip' length 2446049 bytes (2.3 MB) | |
| ================================================== | |
| downloaded 2.3 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/knitr_1.15.1.tar.gz' | |
| Content type 'application/x-gzip' length 1027808 bytes (1003 KB) | |
| ================================================== | |
| downloaded 1003 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/rmarkdown_1.4.tar.gz' | |
| Content type 'application/x-gzip' length 2077472 bytes (2.0 MB) | |
| ================================================== | |
| downloaded 2.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/dplyr_0.5.0.tar.gz' | |
| Content type 'application/x-gzip' length 708476 bytes (691 KB) | |
| ================================================== | |
| downloaded 691 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RMySQL_0.10.11.tar.gz' | |
| Content type 'application/x-gzip' length 54186 bytes (52 KB) | |
| ================================================== | |
| downloaded 52 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RSQLite_1.1-2.tar.gz' | |
| Content type 'application/x-gzip' length 2108699 bytes (2.0 MB) | |
| ================================================== | |
| downloaded 2.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RPostgreSQL_0.4-1.tar.gz' | |
| Content type 'application/x-gzip' length 476204 bytes (465 KB) | |
| ================================================== | |
| downloaded 465 KB | |
| begin installing package ‘mime’ | |
| begin installing package ‘openssl’ | |
| begin installing package ‘curl’ | |
| begin installing package ‘bitops’ | |
| * installing *source* package ‘mime’ ... | |
| ** package ‘mime’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp7dlVjJ/R.INSTALL5b777a383bbd/mime/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o | |
| gcc -shared -L/usr/local/lib64 -o mime.so rawmatch.o | |
| make[1]: Leaving directory '/tmp/Rtmp7dlVjJ/R.INSTALL5b777a383bbd/mime/src' | |
| installing to /usr/local/lib64/R/library/mime/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (mime) | |
| begin installing package ‘backports’ | |
| * installing *source* package ‘bitops’ ... | |
| ** package ‘bitops’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp8ltLiJ/R.INSTALL5b7554f45a18/bitops/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o | |
| gcc -shared -L/usr/local/lib64 -o bitops.so bit-ops.o cksum.o | |
| make[1]: Leaving directory '/tmp/Rtmp8ltLiJ/R.INSTALL5b7554f45a18/bitops/src' | |
| installing to /usr/local/lib64/R/library/bitops/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (bitops) | |
| begin installing package ‘whisker’ | |
| * installing *source* package ‘backports’ ... | |
| ** package ‘backports’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (backports) | |
| begin installing package ‘digest’ | |
| * installing *source* package ‘whisker’ ... | |
| ** package ‘whisker’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (whisker) | |
| begin installing package ‘rstudioapi’ | |
| * installing *source* package ‘rstudioapi’ ... | |
| ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (rstudioapi) | |
| begin installing package ‘jsonlite’ | |
| * installing *source* package ‘curl’ ... | |
| ** package ‘curl’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu | |
| Using PKG_LIBS=-lcurl | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpTCsLiJ/R.INSTALL5b791a6fad97/curl/src' | |
| rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c callbacks.c -o callbacks.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c curl.c -o curl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c download.c -o download.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c escape.c -o escape.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c fetch.c -o fetch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c form.c -o form.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c getdate.c -o getdate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c handle.c -o handle.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c ieproxy.c -o ieproxy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c interrupt.c -o interrupt.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c multi.c -o multi.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c nslookup.c -o nslookup.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c reflist.c -o reflist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c version.c -o version.o | |
| gcc -shared -L/usr/local/lib64 -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o -lcurl | |
| make[1]: Leaving directory '/tmp/RtmpTCsLiJ/R.INSTALL5b791a6fad97/curl/src' | |
| installing to /usr/local/lib64/R/library/curl/libs | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (curl) | |
| begin installing package ‘git2r’ | |
| * installing *source* package ‘openssl’ ... | |
| ** package ‘openssl’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS= | |
| Using PKG_LIBS=-lssl -lcrypto | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpC1TS8I/R.INSTALL5b7314f19f9c/openssl/src' | |
| rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o openssl.so | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o | |
| gcc -shared -L/usr/local/lib64 -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o -lssl -lcrypto | |
| make[1]: Leaving directory '/tmp/RtmpC1TS8I/R.INSTALL5b7314f19f9c/openssl/src' | |
| installing to /usr/local/lib64/R/library/openssl/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (openssl) | |
| begin installing package ‘withr’ | |
| * installing *source* package ‘digest’ ... | |
| ** package ‘digest’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpDas4HO/R.INSTALL5c8963bdcd14/digest/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o | |
| gcc -shared -L/usr/local/lib64 -o digest.so aes.o crc32.o digest.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o xxhash.o | |
| make[1]: Leaving directory '/tmp/RtmpDas4HO/R.INSTALL5c8963bdcd14/digest/src' | |
| installing to /usr/local/lib64/R/library/digest/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (digest) | |
| begin installing package ‘stringi’ | |
| * installing *source* package ‘withr’ ... | |
| ** package ‘withr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (withr) | |
| begin installing package ‘brew’ | |
| * installing *source* package ‘brew’ ... | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (brew) | |
| begin installing package ‘R6’ | |
| * installing *source* package ‘jsonlite’ ... | |
| ** package ‘jsonlite’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmphkmx8n/R.INSTALL5cde615ff2a0/jsonlite/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_array.c -o collapse_array.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_object.c -o collapse_object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c escape_chars.c -o escape_chars.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c null_to_na.c -o null_to_na.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c num_to_char.c -o num_to_char.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c parse.c -o parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c prettify.c -o prettify.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c push_parser.c -o push_parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c r-base64.c -o r-base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c register.c -o register.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c row_collapse.c -o row_collapse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c transpose_list.c -o transpose_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c validate.c -o validate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o | |
| ar rcs libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o | |
| gcc -shared -L/usr/local/lib64 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -L. -lstatyajl | |
| make[1]: Leaving directory '/tmp/Rtmphkmx8n/R.INSTALL5cde615ff2a0/jsonlite/src' | |
| installing to /usr/local/lib64/R/library/jsonlite/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (jsonlite) | |
| begin installing package ‘commonmark’ | |
| * installing *source* package ‘R6’ ... | |
| ** package ‘R6’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (R6) | |
| begin installing package ‘crayon’ | |
| * installing *source* package ‘crayon’ ... | |
| ** package ‘crayon’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (crayon) | |
| begin installing package ‘praise’ | |
| * installing *source* package ‘praise’ ... | |
| ** package ‘praise’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (praise) | |
| begin installing package ‘magrittr’ | |
| * installing *source* package ‘magrittr’ ... | |
| ** package ‘magrittr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (magrittr) | |
| begin installing package ‘highr’ | |
| * installing *source* package ‘highr’ ... | |
| ** package ‘highr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (highr) | |
| begin installing package ‘yaml’ | |
| * installing *source* package ‘commonmark’ ... | |
| ** package ‘commonmark’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpICUQ6e/R.INSTALL61ad67b123e7/commonmark/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions.c -o extensions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c wrapper.c -o wrapper.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/node.c -o cmark/node.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/references.c -o cmark/references.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/render.c -o cmark/render.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/man.c -o cmark/man.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/html.c -o cmark/html.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/table.c -o extensions/table.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o | |
| ar rcs libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o | |
| gcc -shared -L/usr/local/lib64 -o commonmark.so extensions.o wrapper.o -L. -lstatcmark | |
| make[1]: Leaving directory '/tmp/RtmpICUQ6e/R.INSTALL61ad67b123e7/commonmark/src' | |
| installing to /usr/local/lib64/R/library/commonmark/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (commonmark) | |
| begin installing package ‘base64enc’ | |
| * installing *source* package ‘yaml’ ... | |
| ** package ‘yaml’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmpe5frwu/R.INSTALL663640a4fc32/yaml/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r-ext.c -o r-ext.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o | |
| gcc -shared -L/usr/local/lib64 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r-ext.o reader.o scanner.o writer.o | |
| make[1]: Leaving directory '/tmp/Rtmpe5frwu/R.INSTALL663640a4fc32/yaml/src' | |
| installing to /usr/local/lib64/R/library/yaml/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (yaml) | |
| begin installing package ‘assertthat’ | |
| * installing *source* package ‘assertthat’ ... | |
| ** package ‘assertthat’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (assertthat) | |
| begin installing package ‘lazyeval’ | |
| * installing *source* package ‘base64enc’ ... | |
| ** package ‘base64enc’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpSEejCe/R.INSTALL6802170b2be2/base64enc/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o | |
| gcc -shared -L/usr/local/lib64 -o base64enc.so base64.o uriencode.o utf8.o | |
| make[1]: Leaving directory '/tmp/RtmpSEejCe/R.INSTALL6802170b2be2/base64enc/src' | |
| installing to /usr/local/lib64/R/library/base64enc/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (base64enc) | |
| begin installing package ‘DBI’ | |
| * installing *source* package ‘lazyeval’ ... | |
| ** package ‘lazyeval’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpeEc0hN/R.INSTALL683c5b1c3895/lazyeval/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o lazyeval.so expr.o interp.o lazy.o name.o utils.o | |
| make[1]: Leaving directory '/tmp/RtmpeEc0hN/R.INSTALL683c5b1c3895/lazyeval/src' | |
| installing to /usr/local/lib64/R/library/lazyeval/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (lazyeval) | |
| begin installing package ‘BH’ | |
| * installing *source* package ‘DBI’ ... | |
| ** package ‘DBI’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (DBI) | |
| begin installing package ‘plogr’ | |
| * installing *source* package ‘plogr’ ... | |
| ** package ‘plogr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (plogr) | |
| begin installing package ‘Rcpp’ | |
| * installing *source* package ‘BH’ ... | |
| ** package ‘BH’ successfully unpacked and MD5 sums checked | |
| ** inst | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (BH) | |
| begin installing package ‘httr’ | |
| * installing *source* package ‘httr’ ... | |
| ** package ‘httr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** demo | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (httr) | |
| begin installing package ‘memoise’ | |
| * installing *source* package ‘memoise’ ... | |
| ** package ‘memoise’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (memoise) | |
| begin installing package ‘markdown’ | |
| * installing *source* package ‘Rcpp’ ... | |
| ** package ‘Rcpp’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpCaY6ts/R.INSTALL68bc264f6d4d/Rcpp/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c Date.cpp -o Date.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c Module.cpp -o Module.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c Rcpp_init.cpp -o Rcpp_init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c api.cpp -o api.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c attributes.cpp -o attributes.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c barrier.cpp -o barrier.o | |
| g++ -shared -L/usr/local/lib64 -o Rcpp.so Date.o Module.o Rcpp_init.o api.o attributes.o barrier.o | |
| make[1]: Leaving directory '/tmp/RtmpCaY6ts/R.INSTALL68bc264f6d4d/Rcpp/src' | |
| installing to /usr/local/lib64/R/library/Rcpp/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| code for methods in class “C++OverloadedMethods” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| code for methods in class “RcppClass” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| code for methods in class “RcppClass” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (Rcpp) | |
| begin installing package ‘caTools’ | |
| * installing *source* package ‘markdown’ ... | |
| ** package ‘markdown’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmphFdtaX/R.INSTALL6a1661c3c36a/markdown/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o | |
| gcc -shared -L/usr/local/lib64 -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o | |
| make[1]: Leaving directory '/tmp/RtmphFdtaX/R.INSTALL6a1661c3c36a/markdown/src' | |
| installing to /usr/local/lib64/R/library/markdown/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (markdown) | |
| begin installing package ‘rprojroot’ | |
| * installing *source* package ‘rprojroot’ ... | |
| ** package ‘rprojroot’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (rprojroot) | |
| begin installing package ‘tibble’ | |
| * installing *source* package ‘caTools’ ... | |
| ** package ‘caTools’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpAlOLTZ/R.INSTALL6a8a27e77b67/caTools/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -c Gif2R.cpp -o Gif2R.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -c GifTools.cpp -o GifTools.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c runfunc.c -o runfunc.o | |
| g++ -shared -L/usr/local/lib64 -o caTools.so Gif2R.o GifTools.o runfunc.o | |
| make[1]: Leaving directory '/tmp/RtmpAlOLTZ/R.INSTALL6a8a27e77b67/caTools/src' | |
| installing to /usr/local/lib64/R/library/caTools/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (caTools) | |
| begin installing package ‘testthat’ | |
| * installing *source* package ‘testthat’ ... | |
| ** package ‘testthat’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpDjCSzg/R.INSTALL6aea28b68238/testthat/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c label.c -o label.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -c test-catch.cpp -o test-catch.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -c test-example.cpp -o test-example.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -c test-runner.cpp -o test-runner.o | |
| g++ -shared -L/usr/local/lib64 -o testthat.so label.o reassign.o test-catch.o test-example.o test-runner.o | |
| make[1]: Leaving directory '/tmp/RtmpDjCSzg/R.INSTALL6aea28b68238/testthat/src' | |
| installing to /usr/local/lib64/R/library/testthat/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (testthat) | |
| begin installing package ‘RMySQL’ | |
| * installing *source* package ‘tibble’ ... | |
| ** package ‘tibble’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpAk2bKM/R.INSTALL6ac43a820608/tibble/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c matrixToDataFrame.cpp -o matrixToDataFrame.o | |
| g++ -shared -L/usr/local/lib64 -o tibble.so RcppExports.o matrixToDataFrame.o | |
| make[1]: Leaving directory '/tmp/RtmpAk2bKM/R.INSTALL6ac43a820608/tibble/src' | |
| installing to /usr/local/lib64/R/library/tibble/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (tibble) | |
| begin installing package ‘RPostgreSQL’ | |
| * installing *source* package ‘stringi’ ... | |
| ** package ‘stringi’ successfully unpacked and MD5 sums checked | |
| checking for local ICUDT_DIR... icu55/data | |
| checking for R_HOME... /usr/local/lib64/R | |
| checking for R... /usr/local/lib64/R/bin/R | |
| checking for R >= 3.1.0... yes | |
| checking for cat... /usr/bin/cat | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking how to run the C preprocessor... g++ -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
| checking for egrep... /usr/bin/grep -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking elf.h usability... yes | |
| checking elf.h presence... yes | |
| checking for elf.h... yes | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ -std=gnu++11 accepts -g... yes | |
| checking whether the C++ compiler supports the long long type... yes | |
| checking whether the compiler implements namespaces... yes | |
| checking whether the compiler supports Standard Template Library... yes | |
| checking whether std::map is available... yes | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking with pkg-config for ICU4C installed... 57.1 | |
| checking for ICU4C >= 50... yes | |
| checking for proper CPPFLAGS, LDFLAGS, and LIBS... done | |
| checking whether we may build an ICU-based project... yes | |
| checking for available ICU data library (ucnv, uloc, utrans)... yes | |
| checking for available ICU data library (ucol)... yes | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| config.status: creating src/uconfig_local.h | |
| config.status: creating src/install.libs.R | |
| *** stringi configure summary: | |
| ICU_FOUND=1 | |
| ICUDT_DIR=icu55/data | |
| STRINGI_CXXSTD=CXX_STD=CXX11 | |
| STRINGI_CFLAGS= -fpic | |
| STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H | |
| STRINGI_CXXFLAGS= -fpic | |
| STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu | |
| STRINGI_LIBS=-licui18n -licuuc -licudata | |
| *** compiler settings used: | |
| CC=gcc | |
| CPP=g++ -E | |
| LD=g++ | |
| CFLAGS=-g -O2 -fpic | |
| CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG | |
| CXX=g++ -std=gnu++11 | |
| CXXFLAGS= -fpic | |
| LDFLAGS= | |
| LIBS= | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpSjNj0W/R.INSTALL5ebf55326ee9/stringi/src' | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_brkiter.cpp -o stri_brkiter.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_collator.cpp -o stri_collator.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_common.cpp -o stri_common.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_compare.cpp -o stri_compare.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_base.cpp -o stri_container_base.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_listint.cpp -o stri_container_listint.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_listraw.cpp -o stri_container_listraw.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_listutf8.cpp -o stri_container_listutf8.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_regex.cpp -o stri_container_regex.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_usearch.cpp -o stri_container_usearch.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_utf16.cpp -o stri_container_utf16.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_utf8.cpp -o stri_container_utf8.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_encoding_detection.cpp -o stri_encoding_detection.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_encoding_management.cpp -o stri_encoding_management.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_escape.cpp -o stri_escape.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_exception.cpp -o stri_exception.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_ICU_settings.cpp -o stri_ICU_settings.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_join.cpp -o stri_join.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_length.cpp -o stri_length.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_pad.cpp -o stri_pad.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_prepare_arg.cpp -o stri_prepare_arg.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_random.cpp -o stri_random.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_reverse.cpp -o stri_reverse.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_count.cpp -o stri_search_class_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_detect.cpp -o stri_search_class_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_extract.cpp -o stri_search_class_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_locate.cpp -o stri_search_class_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_replace.cpp -o stri_search_class_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_split.cpp -o stri_search_class_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_subset.cpp -o stri_search_class_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_trim.cpp -o stri_search_class_trim.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_common.cpp -o stri_search_common.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_count.cpp -o stri_search_coll_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_split.cpp -o stri_search_coll_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_in.cpp -o stri_search_in.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_other_replace.cpp -o stri_search_other_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_other_split.cpp -o stri_search_other_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_count.cpp -o stri_search_regex_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_match.cpp -o stri_search_regex_match.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_split.cpp -o stri_search_regex_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_sort.cpp -o stri_sort.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_stats.cpp -o stri_stats.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_stringi.cpp -o stri_stringi.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_sub.cpp -o stri_sub.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_test.cpp -o stri_test.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_zone.cpp -o stri_time_zone.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_calendar.cpp -o stri_time_calendar.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_symbols.cpp -o stri_time_symbols.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_format.cpp -o stri_time_format.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_casemap.cpp -o stri_trans_casemap.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_other.cpp -o stri_trans_other.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_normalization.cpp -o stri_trans_normalization.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_ucnv.cpp -o stri_ucnv.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_uloc.cpp -o stri_uloc.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_utils.cpp -o stri_utils.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_wrap.cpp -o stri_wrap.o | |
| g++ -std=gnu++11 -shared -L/usr/local/lib64 -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_replace.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata | |
| make[1]: Leaving directory '/tmp/RtmpSjNj0W/R.INSTALL5ebf55326ee9/stringi/src' | |
| installing via 'install.libs.R' to /usr/local/lib64/R/library/stringi | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (stringi) | |
| begin installing package ‘desc’ | |
| * installing *source* package ‘desc’ ... | |
| ** package ‘desc’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (desc) | |
| begin installing package ‘dplyr’ | |
| * installing *source* package ‘RMySQL’ ... | |
| ** package ‘RMySQL’ successfully unpacked and MD5 sums checked | |
| Found mysql_config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/mysql | |
| Using PKG_LIBS=-L/usr/lib/x86_64-linux-gnu -lmariadbclient -lpthread -lz -lm -ldl | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpRFnrwt/R.INSTALL6b8f3116473/RMySQL/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c RMySQL-init.c -o RMySQL-init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c connection.c -o connection.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c db-apply.c -o db-apply.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c driver.c -o driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c exception.c -o exception.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c fields.c -o fields.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c result.c -o result.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o RMySQL.so RMySQL-init.o connection.o db-apply.o driver.o exception.o fields.o result.o utils.o -L/usr/lib/x86_64-linux-gnu -lmariadbclient -lpthread -lz -lm -ldl | |
| make[1]: Leaving directory '/tmp/RtmpRFnrwt/R.INSTALL6b8f3116473/RMySQL/src' | |
| installing to /usr/local/lib64/R/library/RMySQL/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RMySQL) | |
| begin installing package ‘RSQLite’ | |
| * installing *source* package ‘RPostgreSQL’ ... | |
| ** package ‘RPostgreSQL’ successfully unpacked and MD5 sums checked | |
| checking for gcc... gcc | |
| checking for C compiler default output file name... a.out | |
| checking whether the C compiler works... yes | |
| checking whether we are cross compiling... no | |
| checking for suffix of executables... | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking target system type... x86_64-unknown-linux-gnu | |
| checking for pg_config... /usr/bin/pg_config | |
| checking for "/usr/include/postgresql/libpq-fe.h"... yes | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmpdq3OTA/R.INSTALL6ba04fbe2b56/RPostgreSQL/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-DBI.c -o RS-DBI.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-PQescape.c -o RS-PQescape.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-PostgreSQL.c -o RS-PostgreSQL.o | |
| In file included from /usr/local/lib64/R/include/Rdefines.h:36:0, | |
| from S4R.h:64, | |
| from RS-DBI.h:29, | |
| from RS-PostgreSQL.h:25, | |
| from RS-PostgreSQL.c:17: | |
| RS-PostgreSQL.c: In function ‘RS_PostgreSQL_createDataMappings’: | |
| RS-PostgreSQL.c:446:13: warning: passing argument 1 of ‘Rf_protect’ from incompatible pointer type [-Wincompatible-pointer-types] | |
| PROTECT(flds = RS_DBI_allocFields(num_fields)); | |
| ^ | |
| /usr/local/lib64/R/include/Rinternals.h:661:31: note: in definition of macro ‘PROTECT’ | |
| #define PROTECT(s) Rf_protect(s) | |
| ^ | |
| /usr/local/lib64/R/include/Rinternals.h:1381:6: note: expected ‘SEXP {aka struct SEXPREC *}’ but argument is of type ‘RS_DBI_fields * {aka struct st_sdbi_fields *}’ | |
| SEXP Rf_protect(SEXP); | |
| ^~~~~~~~~~ | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-copy.c -o RS-pgsql-copy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-getResult.c -o RS-pgsql-getResult.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-pqexec.c -o RS-pgsql-pqexec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-pqexecparams.c -o RS-pgsql-pqexecparams.o | |
| gcc -shared -L/usr/local/lib64 -o RPostgreSQL.so RS-DBI.o RS-PQescape.o RS-PostgreSQL.o RS-pgsql-copy.o RS-pgsql-getResult.o RS-pgsql-pqexec.o RS-pgsql-pqexecparams.o -L/usr/lib/x86_64-linux-gnu -lpq | |
| make[1]: Leaving directory '/tmp/Rtmpdq3OTA/R.INSTALL6ba04fbe2b56/RPostgreSQL/src' | |
| installing to /usr/local/lib64/R/library/RPostgreSQL/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RPostgreSQL) | |
| begin installing package ‘stringr’ | |
| * installing *source* package ‘stringr’ ... | |
| ** package ‘stringr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (stringr) | |
| begin installing package ‘xml2’ | |
| * installing *source* package ‘git2r’ ... | |
| ** package ‘git2r’ successfully unpacked and MD5 sums checked | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking for library containing inflate... -lz | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking pkg-config is at least version 0.9.0... yes | |
| checking for libssl... yes | |
| checking for library containing EVP_EncryptInit... -lcrypto | |
| checking for library containing SSL_library_init... no | |
| checking for library containing OPENSSL_init_ssl... none required | |
| checking for library containing libssh2_version... no | |
| configure: WARNING: | |
| --------------------------------------------- | |
| Unable to find the LibSSH2 library on this | |
| system. Building a version without support | |
| for SSH transport. | |
| To build with SSH support, please install: | |
| libssh2-1-dev (package on e.g. Debian and Ubuntu) | |
| libssh2-devel (package on e.g. Fedora, CentOS and RHEL) | |
| libssh2 (Homebrew package on OS X) | |
| and try again. | |
| If the LibSSH2 library is installed on | |
| your system but the git2r configuration | |
| is unable to find it, you can specify | |
| the include and lib path to LibSSH2 with: | |
| R CMD INSTALL --configure-args='--with-libssh2-include=INCLUDE_PATH --with-libssh2-lib=LIB_PATH' git2r | |
| --------------------------------------------- | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking for curl-config... /usr/bin/curl-config | |
| checking for the version of libcurl... 7.52.1 | |
| checking whether libcurl is usable... yes | |
| checking for curl_free... yes | |
| checking for ANSI C header files... no | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking size of void*... 8 | |
| checking for struct stat.st_mtim... yes | |
| checking for struct stat.st_mtimespec... no | |
| checking for struct stat.st_mtime_nsec... no | |
| checking for struct stat.st_mtim.tv_nsec... yes | |
| checking for futimens... yes | |
| checking for qsort_r... yes | |
| checking for qsort_s... no | |
| ----- Results of the git2r package configure ----- | |
| OpenSSL to talk over HTTPS...........: yes | |
| LibSSH2 to enable the SSH transport..: no | |
| -------------------------------------------------- | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp7b0eiJ/R.INSTALL5d1421153381/git2r/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r.c -o git2r.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_config.c -o git2r_config.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_error.c -o git2r_error.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_index.c -o git2r_index.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_note.c -o git2r_note.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_object.c -o git2r_object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_push.c -o git2r_push.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_status.c -o git2r_status.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/annotated_commit.c -o libgit2/src/annotated_commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/apply.c -o libgit2/src/apply.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attr_file.c -o libgit2/src/attr_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attr.c -o libgit2/src/attr.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attrcache.c -o libgit2/src/attrcache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blame_git.c -o libgit2/src/blame_git.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blame.c -o libgit2/src/blame.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blob.c -o libgit2/src/blob.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/branch.c -o libgit2/src/branch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/buf_text.c -o libgit2/src/buf_text.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/buffer.c -o libgit2/src/buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/cache.c -o libgit2/src/cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/checkout.c -o libgit2/src/checkout.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/cherrypick.c -o libgit2/src/cherrypick.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/clone.c -o libgit2/src/clone.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/commit_list.c -o libgit2/src/commit_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/commit.c -o libgit2/src/commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config_cache.c -o libgit2/src/config_cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config_file.c -o libgit2/src/config_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config.c -o libgit2/src/config.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/crlf.c -o libgit2/src/crlf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/curl_stream.c -o libgit2/src/curl_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/date.c -o libgit2/src/date.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/delta.c -o libgit2/src/delta.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/describe.c -o libgit2/src/describe.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_driver.c -o libgit2/src/diff_driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_file.c -o libgit2/src/diff_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_generate.c -o libgit2/src/diff_generate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_parse.c -o libgit2/src/diff_parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_print.c -o libgit2/src/diff_print.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_stats.c -o libgit2/src/diff_stats.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_tform.c -o libgit2/src/diff_tform.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_xdiff.c -o libgit2/src/diff_xdiff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff.c -o libgit2/src/diff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/errors.c -o libgit2/src/errors.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fetch.c -o libgit2/src/fetch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fetchhead.c -o libgit2/src/fetchhead.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/filebuf.c -o libgit2/src/filebuf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fileops.c -o libgit2/src/fileops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/filter.c -o libgit2/src/filter.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fnmatch.c -o libgit2/src/fnmatch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/global.c -o libgit2/src/global.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/graph.c -o libgit2/src/graph.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/hash.c -o libgit2/src/hash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/hashsig.c -o libgit2/src/hashsig.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/ident.c -o libgit2/src/ident.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/ignore.c -o libgit2/src/ignore.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/index.c -o libgit2/src/index.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/indexer.c -o libgit2/src/indexer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/iterator.c -o libgit2/src/iterator.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge_driver.c -o libgit2/src/merge_driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge_file.c -o libgit2/src/merge_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge.c -o libgit2/src/merge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/message.c -o libgit2/src/message.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/mwindow.c -o libgit2/src/mwindow.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/netops.c -o libgit2/src/netops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/notes.c -o libgit2/src/notes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/object_api.c -o libgit2/src/object_api.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/object.c -o libgit2/src/object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_loose.c -o libgit2/src/odb_loose.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_mempack.c -o libgit2/src/odb_mempack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_pack.c -o libgit2/src/odb_pack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb.c -o libgit2/src/odb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/oid.c -o libgit2/src/oid.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/oidarray.c -o libgit2/src/oidarray.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/openssl_stream.c -o libgit2/src/openssl_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pack-objects.c -o libgit2/src/pack-objects.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pack.c -o libgit2/src/pack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/patch_generate.c -o libgit2/src/patch_generate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/patch_parse.c -o libgit2/src/patch_parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/patch.c -o libgit2/src/patch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/path.c -o libgit2/src/path.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pathspec.c -o libgit2/src/pathspec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pool.c -o libgit2/src/pool.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/posix.c -o libgit2/src/posix.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/pqueue.c -o libgit2/src/pqueue.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/proxy.c -o libgit2/src/proxy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/push.c -o libgit2/src/push.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/rebase.c -o libgit2/src/rebase.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refdb_fs.c -o libgit2/src/refdb_fs.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refdb.c -o libgit2/src/refdb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/reflog.c -o libgit2/src/reflog.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refs.c -o libgit2/src/refs.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/refspec.c -o libgit2/src/refspec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/remote.c -o libgit2/src/remote.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/repository.c -o libgit2/src/repository.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/reset.c -o libgit2/src/reset.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/revert.c -o libgit2/src/revert.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/revparse.c -o libgit2/src/revparse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/revwalk.c -o libgit2/src/revwalk.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/settings.c -o libgit2/src/settings.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/sha1_lookup.c -o libgit2/src/sha1_lookup.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/signature.c -o libgit2/src/signature.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/socket_stream.c -o libgit2/src/socket_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/sortedcache.c -o libgit2/src/sortedcache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/stash.c -o libgit2/src/stash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/status.c -o libgit2/src/status.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/strmap.c -o libgit2/src/strmap.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/submodule.c -o libgit2/src/submodule.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/sysdir.c -o libgit2/src/sysdir.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tag.c -o libgit2/src/tag.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/thread-utils.c -o libgit2/src/thread-utils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tls_stream.c -o libgit2/src/tls_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/trace.c -o libgit2/src/trace.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transaction.c -o libgit2/src/transaction.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transport.c -o libgit2/src/transport.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tree-cache.c -o libgit2/src/tree-cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tree.c -o libgit2/src/tree.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/tsort.c -o libgit2/src/tsort.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/util.c -o libgit2/src/util.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/varint.c -o libgit2/src/varint.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/vector.c -o libgit2/src/vector.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/zstream.c -o libgit2/src/zstream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/auth.c -o libgit2/src/transports/auth.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/cred_helpers.c -o libgit2/src/transports/cred_helpers.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/cred.c -o libgit2/src/transports/cred.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/git.c -o libgit2/src/transports/git.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/http.c -o libgit2/src/transports/http.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/local.c -o libgit2/src/transports/local.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/smart_pkt.c -o libgit2/src/transports/smart_pkt.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/smart_protocol.c -o libgit2/src/transports/smart_protocol.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/smart.c -o libgit2/src/transports/smart.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/transports/ssh.c -o libgit2/src/transports/ssh.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/unix/map.c -o libgit2/src/unix/map.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/unix/realpath.c -o libgit2/src/unix/realpath.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xdiffi.c -o libgit2/src/xdiff/xdiffi.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xemit.c -o libgit2/src/xdiff/xemit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xhistogram.c -o libgit2/src/xdiff/xhistogram.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xmerge.c -o libgit2/src/xdiff/xmerge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xpatience.c -o libgit2/src/xdiff/xpatience.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xprepare.c -o libgit2/src/xdiff/xprepare.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/xdiff/xutils.c -o libgit2/src/xdiff/xutils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/deps/http-parser/http_parser.c -o libgit2/deps/http-parser/http_parser.o | |
| ar rcs libmygit.a libgit2/src/annotated_commit.o libgit2/src/apply.o libgit2/src/attr_file.o libgit2/src/attr.o libgit2/src/attrcache.o libgit2/src/blame_git.o libgit2/src/blame.o libgit2/src/blob.o libgit2/src/branch.o libgit2/src/buf_text.o libgit2/src/buffer.o libgit2/src/cache.o libgit2/src/checkout.o libgit2/src/cherrypick.o libgit2/src/clone.o libgit2/src/commit_list.o libgit2/src/commit.o libgit2/src/config_cache.o libgit2/src/config_file.o libgit2/src/config.o libgit2/src/crlf.o libgit2/src/curl_stream.o libgit2/src/date.o libgit2/src/delta.o libgit2/src/describe.o libgit2/src/diff_driver.o libgit2/src/diff_file.o libgit2/src/diff_generate.o libgit2/src/diff_parse.o libgit2/src/diff_print.o libgit2/src/diff_stats.o libgit2/src/diff_tform.o libgit2/src/diff_xdiff.o libgit2/src/diff.o libgit2/src/errors.o libgit2/src/fetch.o libgit2/src/fetchhead.o libgit2/src/filebuf.o libgit2/src/fileops.o libgit2/src/filter.o libgit2/src/fnmatch.o libgit2/src/global.o libgit2/src/graph.o libgit2/src/hash.o libgit2/src/hashsig.o libgit2/src/ident.o libgit2/src/ignore.o libgit2/src/index.o libgit2/src/indexer.o libgit2/src/iterator.o libgit2/src/merge_driver.o libgit2/src/merge_file.o libgit2/src/merge.o libgit2/src/message.o libgit2/src/mwindow.o libgit2/src/netops.o libgit2/src/notes.o libgit2/src/object_api.o libgit2/src/object.o libgit2/src/odb_loose.o libgit2/src/odb_mempack.o libgit2/src/odb_pack.o libgit2/src/odb.o libgit2/src/oid.o libgit2/src/oidarray.o libgit2/src/openssl_stream.o libgit2/src/pack-objects.o libgit2/src/pack.o libgit2/src/patch_generate.o libgit2/src/patch_parse.o libgit2/src/patch.o libgit2/src/path.o libgit2/src/pathspec.o libgit2/src/pool.o libgit2/src/posix.o libgit2/src/pqueue.o libgit2/src/proxy.o libgit2/src/push.o libgit2/src/rebase.o libgit2/src/refdb_fs.o libgit2/src/refdb.o libgit2/src/reflog.o libgit2/src/refs.o libgit2/src/refspec.o libgit2/src/remote.o libgit2/src/repository.o libgit2/src/reset.o libgit2/src/revert.o libgit2/src/revparse.o libgit2/src/revwalk.o libgit2/src/settings.o libgit2/src/sha1_lookup.o libgit2/src/signature.o libgit2/src/socket_stream.o libgit2/src/sortedcache.o libgit2/src/stash.o libgit2/src/status.o libgit2/src/strmap.o libgit2/src/submodule.o libgit2/src/sysdir.o libgit2/src/tag.o libgit2/src/thread-utils.o libgit2/src/tls_stream.o libgit2/src/trace.o libgit2/src/transaction.o libgit2/src/transport.o libgit2/src/tree-cache.o libgit2/src/tree.o libgit2/src/tsort.o libgit2/src/util.o libgit2/src/varint.o libgit2/src/vector.o libgit2/src/zstream.o libgit2/src/transports/auth.o libgit2/src/transports/cred_helpers.o libgit2/src/transports/cred.o libgit2/src/transports/git.o libgit2/src/transports/http.o libgit2/src/transports/local.o libgit2/src/transports/smart_pkt.o libgit2/src/transports/smart_protocol.o libgit2/src/transports/smart.o libgit2/src/transports/ssh.o libgit2/src/unix/map.o libgit2/src/unix/realpath.o libgit2/src/xdiff/xdiffi.o libgit2/src/xdiff/xemit.o libgit2/src/xdiff/xhistogram.o libgit2/src/xdiff/xmerge.o libgit2/src/xdiff/xpatience.o libgit2/src/xdiff/xprepare.o libgit2/src/xdiff/xutils.o libgit2/deps/http-parser/http_parser.o | |
| gcc -shared -L/usr/local/lib64 -o git2r.so git2r.o git2r_arg.o git2r_blame.o git2r_blob.o git2r_branch.o git2r_checkout.o git2r_clone.o git2r_commit.o git2r_config.o git2r_cred.o git2r_diff.o git2r_error.o git2r_graph.o git2r_index.o git2r_libgit2.o git2r_merge.o git2r_note.o git2r_object.o git2r_odb.o git2r_oid.o git2r_push.o git2r_reference.o git2r_reflog.o git2r_remote.o git2r_repository.o git2r_reset.o git2r_revparse.o git2r_revwalk.o git2r_signature.o git2r_stash.o git2r_status.o git2r_tag.o git2r_transfer.o git2r_tree.o -L. -lmygit -lcrypto -lssl -lz -lcurl | |
| make[1]: Leaving directory '/tmp/Rtmp7b0eiJ/R.INSTALL5d1421153381/git2r/src' | |
| installing to /usr/local/lib64/R/library/git2r/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (git2r) | |
| begin installing package ‘htmltools’ | |
| * installing *source* package ‘htmltools’ ... | |
| ** package ‘htmltools’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpgOgCBz/R.INSTALL6ee53e219202/htmltools/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c template.cpp -o template.o | |
| g++ -shared -L/usr/local/lib64 -o htmltools.so RcppExports.o template.o | |
| make[1]: Leaving directory '/tmp/RtmpgOgCBz/R.INSTALL6ee53e219202/htmltools/src' | |
| installing to /usr/local/lib64/R/library/htmltools/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (htmltools) | |
| begin installing package ‘evaluate’ | |
| * installing *source* package ‘evaluate’ ... | |
| ** package ‘evaluate’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (evaluate) | |
| begin installing package ‘devtools’ | |
| * installing *source* package ‘devtools’ ... | |
| ** package ‘devtools’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp058WzB/R.INSTALL6f256eaec469/devtools/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c devtools.c -o devtools.o | |
| gcc -shared -L/usr/local/lib64 -o devtools.so devtools.o | |
| make[1]: Leaving directory '/tmp/Rtmp058WzB/R.INSTALL6f256eaec469/devtools/src' | |
| installing to /usr/local/lib64/R/library/devtools/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (devtools) | |
| begin installing package ‘knitr’ | |
| * installing *source* package ‘knitr’ ... | |
| ** package ‘knitr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** demo | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (knitr) | |
| begin installing package ‘rmarkdown’ | |
| * installing *source* package ‘rmarkdown’ ... | |
| ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (rmarkdown) | |
| * installing *source* package ‘xml2’ ... | |
| ** package ‘xml2’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/libxml2 | |
| Using PKG_LIBS=-lxml2 | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpOG01b0/R.INSTALL6e714e28a9da/xml2/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c connection.cpp -o connection.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_doc.cpp -o xml2_doc.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_init.cpp -o xml2_init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_namespace.cpp -o xml2_namespace.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_node.cpp -o xml2_node.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_output.cpp -o xml2_output.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_schema.cpp -o xml2_schema.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_url.cpp -o xml2_url.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -I/usr/include/libxml2 -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c xml2_xpath.cpp -o xml2_xpath.o | |
| g++ -shared -L/usr/local/lib64 -o xml2.so RcppExports.o connection.o xml2_doc.o xml2_init.o xml2_namespace.o xml2_node.o xml2_output.o xml2_schema.o xml2_url.o xml2_xpath.o -lxml2 | |
| make[1]: Leaving directory '/tmp/RtmpOG01b0/R.INSTALL6e714e28a9da/xml2/src' | |
| installing to /usr/local/lib64/R/library/xml2/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (xml2) | |
| begin installing package ‘roxygen2’ | |
| * installing *source* package ‘roxygen2’ ... | |
| ** package ‘roxygen2’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpSEyqub/R.INSTALL6fab335babca/roxygen2/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c isComplete.cpp -o isComplete.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c leadingSpaces.cpp -o leadingSpaces.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c parser2.cpp -o parser2.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -fpic -c wrapString.cpp -o wrapString.o | |
| g++ -shared -L/usr/local/lib64 -o roxygen2.so RcppExports.o isComplete.o leadingSpaces.o parser2.o wrapString.o | |
| make[1]: Leaving directory '/tmp/RtmpSEyqub/R.INSTALL6fab335babca/roxygen2/src' | |
| installing to /usr/local/lib64/R/library/roxygen2/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (roxygen2) | |
| * installing *source* package ‘RSQLite’ ... | |
| ** package ‘RSQLite’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp9Ftaxi/R.INSTALL6e297ce11cf/RSQLite/src' | |
| Makevars:21: Makevars.local: No such file or directory | |
| touch "Makevars.local" | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c SqliteConnection.cpp -o SqliteConnection.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c SqliteDataFrame.cpp -o SqliteDataFrame.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c SqliteResult.cpp -o SqliteResult.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c SqliteResultImpl.cpp -o SqliteResultImpl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c affinity.c -o affinity.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c connection.cpp -o connection.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c import-file.c -o import-file.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c result.cpp -o result.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -c rsqlite.cpp -o rsqlite.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c sqlite3/extension-functions.c -o sqlite3/extension-functions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_SOUNDEX -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -I"/usr/local/lib64/R/library/plogr/include" -fpic -g -O2 -c sqlite3/sqlite3.c -o sqlite3/sqlite3.o | |
| g++ -shared -L/usr/local/lib64 -o RSQLite.so RcppExports.o SqliteConnection.o SqliteDataFrame.o SqliteResult.o SqliteResultImpl.o affinity.o connection.o import-file.o result.o rsqlite.o sqlite3/extension-functions.o sqlite3/sqlite3.o | |
| make[1]: Leaving directory '/tmp/Rtmp9Ftaxi/R.INSTALL6e297ce11cf/RSQLite/src' | |
| installing to /usr/local/lib64/R/library/RSQLite/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (RSQLite) | |
| * installing *source* package ‘dplyr’ ... | |
| ** package ‘dplyr’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpESGs3E/R.INSTALL6df93b646bee/dplyr/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c address.cpp -o address.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c api.cpp -o api.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c arrange.cpp -o arrange.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c between.cpp -o between.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c bind.cpp -o bind.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c combine_variables.cpp -o combine_variables.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c distinct.cpp -o distinct.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c dplyr.cpp -o dplyr.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c filter.cpp -o filter.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c group_indices.cpp -o group_indices.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c init.cpp -o init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c join.cpp -o join.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c nth.cpp -o nth.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c select.cpp -o select.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c strings_addresses.cpp -o strings_addresses.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c summarise.cpp -o summarise.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c test.cpp -o test.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_DPLYR -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -DBOOST_NO_INT64_T -DBOOST_NO_INTEGRAL_INT64_T -DBOOST_NO_LONG_LONG -fpic -c window.cpp -o window.o | |
| g++ -shared -L/usr/local/lib64 -o dplyr.so RcppExports.o address.o api.o arrange.o between.o bind.o combine_variables.o distinct.o dplyr.o filter.o group_indices.o init.o join.o nth.o select.o strings_addresses.o summarise.o test.o window.o | |
| make[1]: Leaving directory '/tmp/RtmpESGs3E/R.INSTALL6df93b646bee/dplyr/src' | |
| installing to /usr/local/lib64/R/library/dplyr/libs | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (dplyr) | |
| The downloaded source packages are in | |
| ‘/tmp/RtmpI3hK0S/make_packages’ | |
| Updating HTML index of packages in '.Library' | |
| Making 'packages.html' ... done | |
| > | |
| > | |
| R Under development (unstable) (2016-09-28 r71397) -- "Unsuffered Consequences" | |
| Copyright (C) 2016 The R Foundation for Statistical Computing | |
| Platform: x86_64-pc-linux-gnu (64-bit) | |
| R is free software and comes with ABSOLUTELY NO WARRANTY. | |
| You are welcome to redistribute it under certain conditions. | |
| Type 'license()' or 'licence()' for distribution details. | |
| Natural language support but running in an English locale | |
| R is a collaborative project with many contributors. | |
| Type 'contributors()' for more information and | |
| 'citation()' on how to cite R or R packages in publications. | |
| Type 'demo()' for some demos, 'help()' for on-line help, or | |
| 'help.start()' for an HTML browser interface to help. | |
| Type 'q()' to quit R. | |
| > devtools::install_github('rstats-db/RPostgres') | |
| Downloading GitHub repo rstats-db/RPostgres@master | |
| from URL https://api.github.com/repos/rstats-db/RPostgres/zipball/master | |
| Installing RPostgres | |
| '/usr/local/lib64/R/bin/R' --no-site-file --no-environ --no-save --no-restore \ | |
| --quiet CMD INSTALL \ | |
| '/tmp/RtmpoZUeKn/devtools7007357557af/rstats-db-RPostgres-489d4f2' \ | |
| --library='/usr/local/lib64/R/library' --install-tests | |
| * installing *source* package ‘RPostgres’ ... | |
| Using pkg-config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/postgresql | |
| Using PKG_LIBS=-lpq | |
| ** libs | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -g -O2 -c RPostgres-init.c -o RPostgres-init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c connection.cpp -o connection.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c encode.cpp -o encode.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c encrypt.cpp -o encrypt.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -I"/usr/local/lib64/R/library/Rcpp/include" -I"/usr/local/lib64/R/library/BH/include" -fpic -c result.cpp -o result.o | |
| g++ -shared -L/usr/local/lib64 -o RPostgres.so RPostgres-init.o RcppExports.o connection.o encode.o encrypt.o result.o -lpq | |
| installing to /usr/local/lib64/R/library/RPostgres/libs | |
| ** R | |
| ** tests | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RPostgres) | |
| > | |
| > | |
| * using log directory ‘//pool.Rcheck’ | |
| * using R Under development (unstable) (2016-09-28 r71397) | |
| * using platform: x86_64-pc-linux-gnu (64-bit) | |
| * using session charset: UTF-8 | |
| * using option ‘--no-manual’ | |
| * checking for file ‘pool/DESCRIPTION’ ... OK | |
| * checking extension type ... Package | |
| * this is package ‘pool’ version ‘0.1.0’ | |
| * checking package namespace information ... OK | |
| * checking package dependencies ... OK | |
| * checking if this is a source package ... OK | |
| * checking if there is a namespace ... OK | |
| * checking for executable files ... OK | |
| * checking for hidden files and directories ... OK | |
| * checking for portable file names ... OK | |
| * checking for sufficient/correct file permissions ... OK | |
| * checking whether package ‘pool’ can be installed ... OK | |
| * checking installed package size ... OK | |
| * checking package directory ... OK | |
| * checking DESCRIPTION meta-information ... OK | |
| * checking top-level files ... OK | |
| * checking for left-over files ... OK | |
| * checking index information ... OK | |
| * checking package subdirectories ... OK | |
| * checking R files for non-ASCII characters ... OK | |
| * checking R files for syntax errors ... OK | |
| * checking whether the package can be loaded ... OK | |
| * checking whether the package can be loaded with stated dependencies ... OK | |
| * checking whether the package can be unloaded cleanly ... OK | |
| * checking whether the namespace can be loaded with stated dependencies ... OK | |
| * checking whether the namespace can be unloaded cleanly ... OK | |
| * checking loading without being on the library search path ... OK | |
| * checking dependencies in R code ... OK | |
| * checking S3 generic/method consistency ... OK | |
| * checking replacement functions ... OK | |
| * checking foreign function calls ... OK | |
| * checking R code for possible problems ... OK | |
| * checking Rd files ... OK | |
| * checking Rd metadata ... OK | |
| * checking Rd cross-references ... OK | |
| * checking for missing documentation entries ... OK | |
| * checking for code/documentation mismatches ... OK | |
| * checking Rd \usage sections ... OK | |
| * checking Rd contents ... OK | |
| * checking for unstated dependencies in examples ... OK | |
| * checking examples ... OK | |
| * checking for unstated dependencies in ‘tests’ ... OK | |
| * checking tests ... | |
| Running ‘testthat.R’ | |
| OK | |
| * DONE | |
| Status: OK | |
| Bisecting: 382 revisions left to test after this (roughly 9 steps) | |
| [293426bff7113a642b501e9b8e08fcf97de1b8c8] "object.size" format() and print() get more options | |
| running ../pool-test/test-script.sh | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| loading site script './config.site' | |
| loading build-specific script './config.site' | |
| checking for pwd... /usr/bin/pwd | |
| checking whether builddir is srcdir... yes | |
| checking for working aclocal... found | |
| checking for working autoconf... found | |
| checking for working automake... found | |
| checking for working autoheader... found | |
| checking whether ln -s works... yes | |
| checking for bison... bison -y | |
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| checking for sed... /usr/bin/sed | |
| checking for which... /usr/bin/which | |
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| checking for gtar... no | |
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| checking whether texi2any version is at least 5.1... yes | |
| checking for ginstall-info... no | |
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| checking for texi2dvi... /usr/bin/texi2dvi | |
| checking for kpsewhich... /usr/bin/kpsewhich | |
| checking for latex inconsolata package... found zi4.sty | |
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| checking for firefox... no | |
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| checking for xdg-open... /usr/bin/xdg-open | |
| using default browser ... /usr/bin/xdg-open | |
| checking for acroread... no | |
| checking for acroread4... no | |
| checking for xdg-open... /usr/bin/xdg-open | |
| checking for notangle... false | |
| checking for realpath... /usr/bin/realpath | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking how to run the C preprocessor... gcc -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
| checking for egrep... /usr/bin/grep -E | |
| checking whether gcc needs -traditional... no | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking minix/config.h usability... no | |
| checking minix/config.h presence... no | |
| checking for minix/config.h... no | |
| checking whether it is safe to define __EXTENSIONS__... yes | |
| checking how to run the C preprocessor... gcc -E | |
| checking for f95... f95 | |
| checking whether we are using the GNU Fortran 77 compiler... yes | |
| checking whether f95 accepts -g... yes | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking whether g++ can compile C++ code... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking whether __attribute__((visibility())) is supported... yes | |
| checking whether gcc accepts -fvisibility... yes | |
| checking whether f95 accepts -fvisibility... yes | |
| checking for gcc... gcc | |
| checking whether we are using the GNU Objective C compiler... no | |
| checking whether gcc accepts -g... no | |
| checking for Objective C++ compiler... trying some possibilities | |
| checking whether g++ can compile ObjC++... no | |
| checking whether can compile ObjC++... no | |
| no working ObjC++ compiler found | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... (cached) /usr/bin/sed | |
| checking for fgrep... /usr/bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking the maximum length of command line arguments... 1572864 | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for a working dd... /usr/bin/dd | |
| checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1 | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking for f95 option to produce PIC... -fPIC | |
| checking if f95 PIC flag -fPIC works... yes | |
| checking if f95 static flag -static works... yes | |
| checking if f95 supports -c -o file.o... yes | |
| checking if f95 supports -c -o file.o... (cached) yes | |
| checking whether the f95 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for cos in -lm... yes | |
| checking for sin in -lm... yes | |
| checking for dlopen in -ldl... yes | |
| checking readline/history.h usability... yes | |
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| checking for rl_callback_read_char in -lreadline... yes | |
| checking for history_truncate_file... yes | |
| checking whether rl_callback_sigcleanup exists and is declared... yes | |
| checking whether rl_completion_matches exists and is declared... yes | |
| checking whether rl_resize_terminal exists and is declared... yes | |
| checking whether rl_sort_completion_matches exists and is declared... yes | |
| checking for ANSI C header files... (cached) yes | |
| checking for dirent.h that defines DIR... yes | |
| checking for library containing opendir... none required | |
| checking for sys/wait.h that is POSIX.1 compatible... yes | |
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| checking fcntl.h usability... yes | |
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| checking glob.h usability... yes | |
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| checking sched.h usability... yes | |
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| checking for unistd.h... (cached) yes | |
| checking utime.h usability... yes | |
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| checking arpa/inet.h usability... yes | |
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| checking dl.h usability... no | |
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| checking elf.h usability... yes | |
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| checking features.h usability... yes | |
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| checking floatingpoint.h usability... no | |
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| checking langinfo.h usability... yes | |
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| checking errno.h usability... yes | |
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| checking for errno.h... yes | |
| checking for inttypes.h... (cached) yes | |
| checking limits.h usability... yes | |
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| checking locale.h usability... yes | |
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| checking for stdbool.h... yes | |
| checking for stdint.h... (cached) yes | |
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| checking whether setjmp.h is POSIX.1 compatible... yes | |
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| checking for GNU C library with version >= 2... yes | |
| checking return type of signal handlers... void | |
| checking for uint64_t... yes | |
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| checking for pid_t... yes | |
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| checking for blkcnt_t... yes | |
| checking for type of socket length... socklen_t * | |
| checking for stack_t... yes | |
| checking for intptr_t... yes | |
| checking for uintptr_t... yes | |
| checking whether byte ordering is bigendian... no | |
| checking for an ANSI C-conforming const... yes | |
| checking for gcc option to accept ISO C99... none needed | |
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| checking for inline... inline | |
| checking size of int... 4 | |
| checking size of long... 8 | |
| checking size of long long... 8 | |
| checking size of double... 8 | |
| checking size of size_t... 8 | |
| checking size of long double... 16 | |
| checking whether we can compute C Make dependencies... yes, using $(CC) -MM | |
| checking whether gcc supports -c -o FILE.lo... yes | |
| checking for gcc option to support OpenMP... -fopenmp | |
| checking how to get verbose linking output from f95... -v | |
| checking for Fortran 77 libraries of f95... -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgfortran -lm -lquadmath | |
| checking how to get verbose linking output from gcc... -v | |
| checking for C libraries of gcc... -L/usr/local/lib64 -L/usr/lib/gcc/x86_64-linux-gnu/6 -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/6/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/6/../../.. -lgcc_s | |
| checking for dummy main to link with Fortran 77 libraries... none | |
| checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore | |
| checking whether f95 appends underscores to external names... yes | |
| checking whether f95 appends extra underscores to external names... no | |
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| checking whether f95 and gcc agree on double complex... yes | |
| checking for f95 option to support OpenMP... -fopenmp | |
| checking whether g++ accepts -M for generating dependencies... yes | |
| checking for g++ option to support OpenMP... -fopenmp | |
| checking whether we can compute ObjC Make dependencies... no | |
| checking whether C runtime needs -D__NO_MATH_INLINES... no | |
| checking for xmkmf... no | |
| checking whether g++ supports C++98 features by default... no | |
| checking whether g++ supports C++98 features with -std=gnu++98... yes | |
| checking whether g++ supports C++11 features by default... no | |
| checking whether g++ supports C++11 features with -std=gnu++11... yes | |
| checking whether g++ supports C++14 features by default... yes | |
| checking for off_t... yes | |
| checking for working alloca.h... yes | |
| checking for alloca... yes | |
| checking whether alloca is declared... yes | |
| checking whether expm1 exists and is declared... yes | |
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| checking whether rintl exists and is declared... yes | |
| checking whether va_copy exists and is declared... yes | |
| checking for isblank... yes | |
| checking sunmath.h usability... no | |
| checking sunmath.h presence... no | |
| checking for sunmath.h... no | |
| checking for cospi in -lsunmath... no | |
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| checking for exp10... yes | |
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| checking for fseeko... yes | |
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| checking whether getpwuid exists and is declared... yes | |
| checking whether kill exists and is declared... yes | |
| checking whether sigaction exists and is declared... yes | |
| checking whether sigaltstack exists and is declared... yes | |
| checking whether sigemptyset exists and is declared... yes | |
| checking whether fdopen exists and is declared... yes | |
| checking whether popen exists and is declared... yes | |
| checking whether getline exists and is declared... yes | |
| checking whether select exists and is declared... yes | |
| checking whether setenv exists and is declared... yes | |
| checking whether unsetenv exists and is declared... yes | |
| checking whether getrlimit exists and is declared... yes | |
| checking whether getrusage exists and is declared... yes | |
| checking whether getpriority exists and is declared... yes | |
| checking whether chmod exists and is declared... yes | |
| checking whether mkfifo exists and is declared... yes | |
| checking whether stat exists and is declared... yes | |
| checking whether umask exists and is declared... yes | |
| checking whether gettimeofday exists and is declared... yes | |
| checking whether utimes exists and is declared... yes | |
| checking whether times exists and is declared... yes | |
| checking whether gmtime_r exists and is declared... yes | |
| checking whether localtime_r exists and is declared... yes | |
| checking whether nl_langinfo exists and is declared... yes | |
| checking whether access exists and is declared... yes | |
| checking whether chdir exists and is declared... yes | |
| checking whether execv exists and is declared... yes | |
| checking whether ftruncate exists and is declared... yes | |
| checking whether getcwd exists and is declared... yes | |
| checking whether geteuid exists and is declared... yes | |
| checking whether getuid exists and is declared... yes | |
| checking whether link exists and is declared... yes | |
| checking whether readlink exists and is declared... yes | |
| checking whether symlink exists and is declared... yes | |
| checking whether sysconf exists and is declared... yes | |
| checking whether sched_setaffinity exists and is declared... yes | |
| checking whether sched_getaffinity exists and is declared... yes | |
| checking whether utime exists and is declared... yes | |
| checking whether utimensat exists and is declared... yes | |
| checking for clock_gettime in -lrt... yes | |
| checking whether clock_gettime exists and is declared... yes | |
| checking whether timespec_get exists and is declared... yes | |
| checking for putenv... yes | |
| checking whether putenv is declared... yes | |
| checking for vasprintf... yes | |
| checking whether vasprintf is declared... yes | |
| checking for mempcpy... yes | |
| checking for realpath... yes | |
| checking whether realpath is declared... yes | |
| checking whether glob exists and is declared... yes | |
| checking for isnan... yes | |
| checking whether isfinite is declared... yes | |
| checking whether isnan is declared... yes | |
| checking whether you have IEEE 754 floating-point arithmetic... yes | |
| checking whether putenv("FOO") can unset an environment variable... yes | |
| checking whether putenv("FOO=") can unset an environment variable... no | |
| checking for nl_langinfo and CODESET... yes | |
| checking for mkdtemp... yes | |
| checking for strdup... yes | |
| checking for strncasecmp... yes | |
| checking whether mkdtemp is declared... yes | |
| checking whether strdup is declared... yes | |
| checking whether strncasecmp is declared... yes | |
| checking for library containing connect... none required | |
| checking for library containing gethostbyname... none required | |
| checking for library containing xdr_string... none required | |
| checking for working calloc... yes | |
| checking for working isfinite... yes | |
| checking for working log1p... yes | |
| checking whether ftell works correctly on files opened for append... yes | |
| checking for working sigaction... yes | |
| checking whether mktime sets errno... no | |
| checking whether mktime works correctly outside 1902-2037... yes | |
| checking complex.h usability... yes | |
| checking complex.h presence... yes | |
| checking for complex.h... yes | |
| checking for double complex... yes | |
| checking whether C99 double complex is supported... yes | |
| checking whether cabs exists and is declared... yes | |
| checking whether carg exists and is declared... yes | |
| checking whether cexp exists and is declared... yes | |
| checking whether clog exists and is declared... yes | |
| checking whether csqrt exists and is declared... yes | |
| checking whether cpow exists and is declared... yes | |
| checking whether ccos exists and is declared... yes | |
| checking whether csin exists and is declared... yes | |
| checking whether ctan exists and is declared... yes | |
| checking whether cacos exists and is declared... yes | |
| checking whether casin exists and is declared... yes | |
| checking whether catan exists and is declared... yes | |
| checking whether ccosh exists and is declared... yes | |
| checking whether csinh exists and is declared... yes | |
| checking whether ctanh exists and is declared... yes | |
| checking whether 'struct tm' includes tm_zone... yes | |
| checking whether 'struct tm' includes tm_gmtoff... yes | |
| checking iconv.h usability... yes | |
| checking iconv.h presence... yes | |
| checking for iconv.h... yes | |
| checking for iconv... yes | |
| checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes | |
| checking for iconvlist... no | |
| checking for iconv... yes | |
| checking for iconv declaration... | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking wchar.h usability... yes | |
| checking wchar.h presence... yes | |
| checking for wchar.h... yes | |
| checking wctype.h usability... yes | |
| checking wctype.h presence... yes | |
| checking for wctype.h... yes | |
| checking whether mbrtowc exists and is declared... yes | |
| checking whether wcrtomb exists and is declared... yes | |
| checking whether wcscoll exists and is declared... yes | |
| checking whether wcsftime exists and is declared... yes | |
| checking whether wcstod exists and is declared... yes | |
| checking whether mbstowcs exists and is declared... yes | |
| checking whether wcstombs exists and is declared... yes | |
| checking whether wctrans exists and is declared... yes | |
| checking whether iswblank exists and is declared... yes | |
| checking whether wctype exists and is declared... yes | |
| checking whether iswctype exists and is declared... yes | |
| checking for wctrans_t... yes | |
| checking for mbstate_t... yes | |
| checking for ICU... yes | |
| checking for X... libraries , headers | |
| checking for gethostbyname... yes | |
| checking for connect... yes | |
| checking for remove... yes | |
| checking for shmat... yes | |
| checking for IceConnectionNumber in -lICE... yes | |
| checking X11/Intrinsic.h usability... yes | |
| checking X11/Intrinsic.h presence... yes | |
| checking for X11/Intrinsic.h... yes | |
| checking for XtToolkitInitialize in -lXt... yes | |
| using X11 ... yes | |
| checking for KeySym... yes | |
| checking X11/Xmu/Atoms.h usability... no | |
| checking X11/Xmu/Atoms.h presence... no | |
| checking for X11/Xmu/Atoms.h... no | |
| checking whether pkg-config knows about cairo and pango... yes | |
| checking whether cairo including pango is >= 1.2 and works... yes | |
| checking for tclConfig.sh... no | |
| checking for tclConfig.sh in library (sub)directories... no | |
| checking for tkConfig.sh... no | |
| checking for tkConfig.sh in library (sub)directories... no | |
| checking for tcl.h... no | |
| checking for BSD networking... yes | |
| checking rpc/types.h usability... yes | |
| checking rpc/types.h presence... yes | |
| checking for rpc/types.h... yes | |
| checking for rpc/xdr.h... yes | |
| checking for XDR support... yes | |
| checking for inflateInit2_ in -lz... yes | |
| checking zlib.h usability... yes | |
| checking zlib.h presence... yes | |
| checking for zlib.h... yes | |
| checking if zlib version >= 1.2.5... yes | |
| checking whether zlib support suffices... yes | |
| checking mmap support for zlib... yes | |
| checking for BZ2_bzlibVersion in -lbz2... yes | |
| checking bzlib.h usability... yes | |
| checking bzlib.h presence... yes | |
| checking for bzlib.h... yes | |
| checking if bzip2 version >= 1.0.6... yes | |
| checking whether bzip2 support suffices... yes | |
| checking for lzma_version_number in -llzma... yes | |
| checking lzma.h usability... yes | |
| checking lzma.h presence... yes | |
| checking for lzma.h... yes | |
| checking if lzma version >= 5.0.3... yes | |
| checking for pcre_fullinfo in -lpcre... yes | |
| checking pcre.h usability... yes | |
| checking pcre.h presence... yes | |
| checking for pcre.h... yes | |
| checking pcre/pcre.h usability... no | |
| checking pcre/pcre.h presence... no | |
| checking for pcre/pcre.h... no | |
| checking if PCRE version >= 8.10, < 10.0 and has UTF-8 support... yes | |
| checking if PCRE version >= 8.32... yes | |
| checking whether PCRE support suffices... yes | |
| checking for curl-config... /usr/bin/curl-config | |
| checking libcurl version ... 7.52.1 | |
| checking curl/curl.h usability... yes | |
| checking curl/curl.h presence... yes | |
| checking for curl/curl.h... yes | |
| checking if libcurl is version 7 and >= 7.28.0... yes | |
| checking if libcurl supports https... yes | |
| checking if jpeglib version >= 6b... yes | |
| checking for jpeg_destroy_compress in -ljpeg... yes | |
| checking if libpng version >= 1.2.7... yes | |
| checking for png_create_write_struct in -lpng... yes | |
| checking tiffio.h usability... yes | |
| checking tiffio.h presence... yes | |
| checking for tiffio.h... yes | |
| checking for TIFFOpen in -ltiff... yes | |
| checking whether leap seconds are treated according to POSIX... yes | |
| checking for inline... inline | |
| checking for sys/time.h... (cached) yes | |
| checking for stdlib.h... (cached) yes | |
| checking for unistd.h... (cached) yes | |
| checking for sys/param.h... (cached) yes | |
| checking for struct stat.st_atim.tv_nsec... yes | |
| checking whether struct stat.st_atim is of type struct timespec... yes | |
| checking for setitimer... yes | |
| checking for special C compiler options needed for large files... no | |
| checking for _FILE_OFFSET_BITS value needed for large files... no | |
| checking for _LARGEFILE_SOURCE value needed for large files... no | |
| checking whether KERN_USRSTACK sysctl is supported... no | |
| checking for visible __lib_stack_end... yes | |
| checking for lpr... no | |
| checking for lp... no | |
| checking for paperconf... /usr/bin/paperconf | |
| checking for gfortran... gfortran | |
| checking whether we are using the GNU Fortran compiler... yes | |
| checking whether gfortran accepts -g... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... no | |
| checking for gfortran option to produce PIC... -fPIC | |
| checking if gfortran PIC flag -fPIC works... yes | |
| checking if gfortran static flag -static works... yes | |
| checking if gfortran supports -c -o file.o... yes | |
| checking if gfortran supports -c -o file.o... (cached) yes | |
| checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for Fortran flag to compile .f90 files... none | |
| checking for Fortran flag to compile .f95 files... none | |
| checking for gfortran option to support OpenMP... -fopenmp | |
| checking whether NLS is requested... yes | |
| Configuring src/extra/intl directory | |
| checking for a thread-safe mkdir -p... /usr/bin/mkdir -p | |
| checking whether we are using the GNU C Library 2 or newer... yes | |
| checking for ranlib... (cached) ranlib | |
| checking for simple visibility declarations... yes | |
| checking for stdint.h... yes | |
| checking for getpagesize... yes | |
| checking for working mmap... yes | |
| checking whether integer division by zero raises SIGFPE... yes | |
| checking for inttypes.h... yes | |
| checking for unsigned long long int... yes | |
| checking for inttypes.h... (cached) yes | |
| checking whether the inttypes.h PRIxNN macros are broken... no | |
| checking for ld used by gcc... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking for shared library run path origin... done | |
| checking whether imported symbols can be declared weak... yes | |
| checking for multithread API to use... none | |
| checking argz.h usability... yes | |
| checking argz.h presence... yes | |
| checking for argz.h... yes | |
| checking for inttypes.h... (cached) yes | |
| checking for limits.h... (cached) yes | |
| checking for unistd.h... (cached) yes | |
| checking for sys/param.h... (cached) yes | |
| checking for getcwd... yes | |
| checking for getegid... yes | |
| checking for geteuid... yes | |
| checking for getgid... yes | |
| checking for getuid... yes | |
| checking for mempcpy... (cached) yes | |
| checking for munmap... yes | |
| checking for stpcpy... yes | |
| checking for strcasecmp... yes | |
| checking for strdup... (cached) yes | |
| checking for strtoul... yes | |
| checking for tsearch... yes | |
| checking for argz_count... yes | |
| checking for argz_stringify... yes | |
| checking for argz_next... yes | |
| checking for __fsetlocking... yes | |
| checking whether feof_unlocked is declared... yes | |
| checking whether fgets_unlocked is declared... yes | |
| checking for iconv... (cached) yes | |
| checking for iconv declaration... (cached) | |
| extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); | |
| checking for NL_LOCALE_NAME macro... yes | |
| checking for bison... bison | |
| checking version of bison... 3.0.4, ok | |
| checking for long long int... yes | |
| checking for long double... yes | |
| checking for wchar_t... yes | |
| checking for wint_t... yes | |
| checking for intmax_t... yes | |
| checking whether printf() supports POSIX/XSI format strings... yes | |
| checking whether we are using the GNU C Library 2.1 or newer... yes | |
| checking for stdint.h... (cached) yes | |
| checking for SIZE_MAX... yes | |
| checking for stdint.h... (cached) yes | |
| checking for CFPreferencesCopyAppValue... no | |
| checking for CFLocaleCopyCurrent... no | |
| checking for ptrdiff_t... yes | |
| checking stddef.h usability... yes | |
| checking stddef.h presence... yes | |
| checking for stddef.h... yes | |
| checking for stdlib.h... (cached) yes | |
| checking for string.h... (cached) yes | |
| checking for asprintf... yes | |
| checking for fwprintf... yes | |
| checking for putenv... (cached) yes | |
| checking for setenv... yes | |
| checking for setlocale... yes | |
| checking for snprintf... yes | |
| checking for wcslen... yes | |
| checking whether _snprintf is declared... no | |
| checking whether _snwprintf is declared... no | |
| checking whether getc_unlocked is declared... yes | |
| checking for nl_langinfo and CODESET... (cached) yes | |
| checking for LC_MESSAGES... yes | |
| checking for CFPreferencesCopyAppValue... (cached) no | |
| checking for CFLocaleCopyCurrent... (cached) no | |
| checking whether included gettext is requested... no | |
| checking for GNU gettext in libc... yes | |
| checking whether to use NLS... yes | |
| checking where the gettext function comes from... libc | |
| Finished configuring src/extra/intl directory | |
| using as R_SHELL for scripts ... /bin/bash | |
| configure: creating ./config.status | |
| config.status: creating Makeconf | |
| config.status: creating Makefile | |
| config.status: creating doc/Makefile | |
| config.status: creating doc/html/Makefile | |
| config.status: creating doc/manual/Makefile | |
| config.status: creating etc/Makefile | |
| config.status: creating etc/Makeconf | |
| config.status: creating etc/Renviron | |
| config.status: creating etc/javaconf | |
| config.status: creating etc/ldpaths | |
| config.status: creating m4/Makefile | |
| config.status: creating po/Makefile | |
| config.status: creating share/Makefile | |
| config.status: creating src/Makefile | |
| config.status: creating src/appl/Makefile | |
| config.status: creating src/extra/Makefile | |
| config.status: creating src/extra/blas/Makefile | |
| config.status: creating src/extra/intl/Makefile | |
| config.status: creating src/extra/tre/Makefile | |
| config.status: creating src/extra/tzone/Makefile | |
| config.status: creating src/extra/xdr/Makefile | |
| config.status: creating src/include/Makefile | |
| config.status: creating src/include/Rmath.h0 | |
| config.status: creating src/include/R_ext/Makefile | |
| config.status: creating src/library/Recommended/Makefile | |
| config.status: creating src/library/Makefile | |
| config.status: creating src/library/base/DESCRIPTION | |
| config.status: creating src/library/base/Makefile | |
| config.status: creating src/library/compiler/DESCRIPTION | |
| config.status: creating src/library/compiler/Makefile | |
| config.status: creating src/library/datasets/DESCRIPTION | |
| config.status: creating src/library/datasets/Makefile | |
| config.status: creating src/library/graphics/DESCRIPTION | |
| config.status: creating src/library/graphics/Makefile | |
| config.status: creating src/library/graphics/src/Makefile | |
| config.status: creating src/library/grDevices/DESCRIPTION | |
| config.status: creating src/library/grDevices/Makefile | |
| config.status: creating src/library/grDevices/src/Makefile | |
| config.status: creating src/library/grDevices/src/cairo/Makefile | |
| config.status: creating src/library/grid/DESCRIPTION | |
| config.status: creating src/library/grid/Makefile | |
| config.status: creating src/library/grid/src/Makefile | |
| config.status: creating src/library/methods/DESCRIPTION | |
| config.status: creating src/library/methods/Makefile | |
| config.status: creating src/library/methods/src/Makefile | |
| config.status: creating src/library/parallel/DESCRIPTION | |
| config.status: creating src/library/parallel/Makefile | |
| config.status: creating src/library/parallel/src/Makefile | |
| config.status: creating src/library/profile/Makefile | |
| config.status: creating src/library/stats/DESCRIPTION | |
| config.status: creating src/library/stats/Makefile | |
| config.status: creating src/library/stats/src/Makefile | |
| config.status: creating src/library/stats4/DESCRIPTION | |
| config.status: creating src/library/stats4/Makefile | |
| config.status: creating src/library/splines/DESCRIPTION | |
| config.status: creating src/library/splines/Makefile | |
| config.status: creating src/library/splines/src/Makefile | |
| config.status: creating src/library/tcltk/DESCRIPTION | |
| config.status: creating src/library/tcltk/Makefile | |
| config.status: creating src/library/tcltk/src/Makefile | |
| config.status: creating src/library/tools/DESCRIPTION | |
| config.status: creating src/library/tools/Makefile | |
| config.status: creating src/library/tools/src/Makefile | |
| config.status: creating src/library/translations/DESCRIPTION | |
| config.status: creating src/library/translations/Makefile | |
| config.status: creating src/library/utils/DESCRIPTION | |
| config.status: creating src/library/utils/Makefile | |
| config.status: creating src/library/utils/src/Makefile | |
| config.status: creating src/main/Makefile | |
| config.status: creating src/modules/Makefile | |
| config.status: creating src/modules/X11/Makefile | |
| config.status: creating src/modules/internet/Makefile | |
| config.status: creating src/modules/lapack/Makefile | |
| config.status: creating src/nmath/Makefile | |
| config.status: creating src/nmath/standalone/Makefile | |
| config.status: creating src/scripts/Makefile | |
| config.status: creating src/scripts/R.sh | |
| config.status: creating src/scripts/Rcmd | |
| config.status: creating src/scripts/f77_f2c | |
| config.status: creating src/scripts/javareconf | |
| config.status: creating src/scripts/mkinstalldirs | |
| config.status: creating src/scripts/pager | |
| config.status: creating src/scripts/rtags | |
| config.status: creating src/unix/Makefile | |
| config.status: creating tests/Makefile | |
| config.status: creating tests/Embedding/Makefile | |
| config.status: creating tests/Examples/Makefile | |
| config.status: creating tools/Makefile | |
| config.status: creating src/include/config.h | |
| config.status: executing libtool commands | |
| config.status: executing stamp-h commands | |
| R is now configured for x86_64-pc-linux-gnu | |
| Source directory: . | |
| Installation directory: /usr/local | |
| C compiler: gcc -g -O2 | |
| Fortran 77 compiler: f95 -g -O2 | |
| Default C++ compiler: g++ | |
| C++98 compiler: g++ -std=gnu++98 | |
| C++11 compiler: g++ -std=gnu++11 | |
| C++14 compiler: g++ | |
| Fortran 90/95 compiler: gfortran -g -O2 | |
| Obj-C compiler: | |
| Interfaces supported: X11 | |
| External libraries: readline, curl | |
| Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU | |
| Options enabled: shared BLAS, R profiling | |
| Capabilities skipped: | |
| Options not enabled: memory profiling | |
| Recommended packages: no | |
| make: Nothing to be done for 'front-matter'. | |
| make: Nothing to be done for 'html-non-svn'. | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/m4' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Nothing to be done for 'R'. | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Nothing to be done for 'R'. | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| creating src/scripts/R.fe | |
| make[3]: Entering directory '/r-source/src/scripts' | |
| mkdir -p -- ../../bin | |
| make[3]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[2]: Entering directory '/r-source/src/include' | |
| mkdir -p -- ../../include | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| mkdir -p -- ../../../include/R_ext | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[4]: Entering directory '/r-source/src/extra/blas' | |
| f95 -fopenmp -fpic -g -O2 -c blas.f -o blas.o | |
| f95 -fopenmp -fpic -g -O2 -c cmplxblas.f -o cmplxblas.o | |
| make[4]: Entering directory '/r-source/src/extra/tre' | |
| making regcomp.d from regcomp.c | |
| making regerror.d from regerror.c | |
| making regexec.d from regexec.c | |
| making tre-ast.d from tre-ast.c | |
| making tre-compile.d from tre-compile.c | |
| making tre-match-approx.d from tre-match-approx.c | |
| making tre-match-backtrack.d from tre-match-backtrack.c | |
| making tre-match-parallel.d from tre-match-parallel.c | |
| making tre-parse.d from tre-parse.c | |
| making tre-mem.d from tre-mem.c | |
| making tre-stack.d from tre-stack.c | |
| making xmalloc.d from xmalloc.c | |
| make[4]: Leaving directory '/r-source/src/extra/tre' | |
| make[4]: Entering directory '/r-source/src/extra/tre' | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regcomp.c -o regcomp.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regerror.c -o regerror.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c regexec.c -o regexec.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-ast.c -o tre-ast.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-compile.c -o tre-compile.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-approx.c -o tre-match-approx.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-backtrack.c -o tre-match-backtrack.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-match-parallel.c -o tre-match-parallel.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-mem.c -o tre-mem.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-parse.c -o tre-parse.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c tre-stack.c -o tre-stack.o | |
| gcc -I. -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c xmalloc.c -o xmalloc.o | |
| ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o | |
| ranlib libtre.a | |
| make[4]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| gcc -shared -fopenmp -L/usr/local/lib64 -o libRblas.so blas.o cmplxblas.o -lgfortran -lm -lquadmath | |
| make[4]: Leaving directory '/r-source/src/extra/blas' | |
| make[4]: Entering directory '/r-source/src/extra/blas' | |
| mkdir -p -- /r-source/lib | |
| make[4]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| making integrate.d from integrate.c | |
| making interv.d from interv.c | |
| making maxcol.d from maxcol.c | |
| making optim.d from optim.c | |
| making pretty.d from pretty.c | |
| making uncmin.d from uncmin.c | |
| make[3]: Entering directory '/r-source/src/appl' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c integrate.c -o integrate.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c interv.c -o interv.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c maxcol.c -o maxcol.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c optim.c -o optim.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pretty.c -o pretty.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c uncmin.c -o uncmin.o | |
| f95 -fopenmp -g -O2 -c dchdc.f -o dchdc.o | |
| f95 -fopenmp -g -O2 -c dpbfa.f -o dpbfa.o | |
| f95 -fopenmp -g -O2 -c dpbsl.f -o dpbsl.o | |
| f95 -fopenmp -g -O2 -c dpoco.f -o dpoco.o | |
| f95 -fopenmp -g -O2 -c dpodi.f -o dpodi.o | |
| f95 -fopenmp -g -O2 -c dpofa.f -o dpofa.o | |
| f95 -fopenmp -g -O2 -c dposl.f -o dposl.o | |
| f95 -fopenmp -g -O2 -c dqrdc.f -o dqrdc.o | |
| f95 -fopenmp -g -O2 -c dqrdc2.f -o dqrdc2.o | |
| f95 -fopenmp -g -O2 -c dqrls.f -o dqrls.o | |
| f95 -fopenmp -g -O2 -c dqrsl.f -o dqrsl.o | |
| f95 -fopenmp -g -O2 -c dqrutl.f -o dqrutl.o | |
| f95 -fopenmp -g -O2 -c dsvdc.f -o dsvdc.o | |
| f95 -fopenmp -g -O2 -c dtrco.f -o dtrco.o | |
| f95 -fopenmp -g -O2 -c dtrsl.f -o dtrsl.o | |
| ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o | |
| ranlib libappl.a | |
| make[3]: Leaving directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| making mlutils.d from mlutils.c | |
| making d1mach.d from d1mach.c | |
| making i1mach.d from i1mach.c | |
| making fmax2.d from fmax2.c | |
| making fmin2.d from fmin2.c | |
| making fprec.d from fprec.c | |
| making fround.d from fround.c | |
| making ftrunc.d from ftrunc.c | |
| making sign.d from sign.c | |
| making fsign.d from fsign.c | |
| making imin2.d from imin2.c | |
| making imax2.d from imax2.c | |
| making chebyshev.d from chebyshev.c | |
| making log1p.d from log1p.c | |
| making expm1.d from expm1.c | |
| making lgammacor.d from lgammacor.c | |
| making stirlerr.d from stirlerr.c | |
| making gammalims.d from gammalims.c | |
| making bd0.d from bd0.c | |
| making gamma.d from gamma.c | |
| making gamma_cody.d from gamma_cody.c | |
| making lgamma.d from lgamma.c | |
| making beta.d from beta.c | |
| making lbeta.d from lbeta.c | |
| making cospi.d from cospi.c | |
| making polygamma.d from polygamma.c | |
| making bessel_i.d from bessel_i.c | |
| making bessel_j.d from bessel_j.c | |
| making bessel_k.d from bessel_k.c | |
| making bessel_y.d from bessel_y.c | |
| making choose.d from choose.c | |
| making snorm.d from snorm.c | |
| making sexp.d from sexp.c | |
| making pgamma.d from pgamma.c | |
| making dgamma.d from dgamma.c | |
| making qgamma.d from qgamma.c | |
| making rgamma.d from rgamma.c | |
| making dbeta.d from dbeta.c | |
| making pbeta.d from pbeta.c | |
| making qbeta.d from qbeta.c | |
| making dunif.d from dunif.c | |
| making rbeta.d from rbeta.c | |
| making punif.d from punif.c | |
| making qunif.d from qunif.c | |
| making runif.d from runif.c | |
| making dnorm.d from dnorm.c | |
| making pnorm.d from pnorm.c | |
| making qnorm.d from qnorm.c | |
| making rnorm.d from rnorm.c | |
| making plnorm.d from plnorm.c | |
| making dlnorm.d from dlnorm.c | |
| making qlnorm.d from qlnorm.c | |
| making rlnorm.d from rlnorm.c | |
| making df.d from df.c | |
| making pf.d from pf.c | |
| making qf.d from qf.c | |
| making rf.d from rf.c | |
| making dnf.d from dnf.c | |
| making dt.d from dt.c | |
| making pt.d from pt.c | |
| making qt.d from qt.c | |
| making rt.d from rt.c | |
| making dnt.d from dnt.c | |
| making dchisq.d from dchisq.c | |
| making pchisq.d from pchisq.c | |
| making qchisq.d from qchisq.c | |
| making rchisq.d from rchisq.c | |
| making rnchisq.d from rnchisq.c | |
| making pbinom.d from pbinom.c | |
| making qbinom.d from qbinom.c | |
| making rbinom.d from rbinom.c | |
| making dbinom.d from dbinom.c | |
| making dcauchy.d from dcauchy.c | |
| making rmultinom.d from rmultinom.c | |
| making pcauchy.d from pcauchy.c | |
| making qcauchy.d from qcauchy.c | |
| making rcauchy.d from rcauchy.c | |
| making dexp.d from dexp.c | |
| making pexp.d from pexp.c | |
| making qexp.d from qexp.c | |
| making rexp.d from rexp.c | |
| making dgeom.d from dgeom.c | |
| making pgeom.d from pgeom.c | |
| making qgeom.d from qgeom.c | |
| making rgeom.d from rgeom.c | |
| making dhyper.d from dhyper.c | |
| making phyper.d from phyper.c | |
| making qhyper.d from qhyper.c | |
| making rhyper.d from rhyper.c | |
| making dnbinom.d from dnbinom.c | |
| making pnbinom.d from pnbinom.c | |
| making qnbinom.d from qnbinom.c | |
| making rnbinom.d from rnbinom.c | |
| making dpois.d from dpois.c | |
| making ppois.d from ppois.c | |
| making qpois.d from qpois.c | |
| making rpois.d from rpois.c | |
| making dweibull.d from dweibull.c | |
| making pweibull.d from pweibull.c | |
| making qweibull.d from qweibull.c | |
| making rweibull.d from rweibull.c | |
| making dlogis.d from dlogis.c | |
| making plogis.d from plogis.c | |
| making qlogis.d from qlogis.c | |
| making rlogis.d from rlogis.c | |
| making pnchisq.d from pnchisq.c | |
| making qnchisq.d from qnchisq.c | |
| making dnchisq.d from dnchisq.c | |
| making dnbeta.d from dnbeta.c | |
| making pnbeta.d from pnbeta.c | |
| making qnbeta.d from qnbeta.c | |
| making pnf.d from pnf.c | |
| making pnt.d from pnt.c | |
| making qnf.d from qnf.c | |
| making qnt.d from qnt.c | |
| making ptukey.d from ptukey.c | |
| making qtukey.d from qtukey.c | |
| making toms708.d from toms708.c | |
| making wilcox.d from wilcox.c | |
| making signrank.d from signrank.c | |
| make[3]: Entering directory '/r-source/src/nmath' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c mlutils.c -o mlutils.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c d1mach.c -o d1mach.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c i1mach.c -o i1mach.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fmax2.c -o fmax2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fmin2.c -o fmin2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fprec.c -o fprec.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fround.c -o fround.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ftrunc.c -o ftrunc.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sign.c -o sign.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c fsign.c -o fsign.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c imax2.c -o imax2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c imin2.c -o imin2.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c chebyshev.c -o chebyshev.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c log1p.c -o log1p.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c expm1.c -o expm1.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lgammacor.c -o lgammacor.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gammalims.c -o gammalims.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c stirlerr.c -o stirlerr.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bd0.c -o bd0.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gamma.c -o gamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lgamma.c -o lgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c gamma_cody.c -o gamma_cody.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c beta.c -o beta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c lbeta.c -o lbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c polygamma.c -o polygamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c cospi.c -o cospi.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_i.c -o bessel_i.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_j.c -o bessel_j.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_k.c -o bessel_k.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c bessel_y.c -o bessel_y.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c choose.c -o choose.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c snorm.c -o snorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sexp.c -o sexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dgamma.c -o dgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pgamma.c -o pgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qgamma.c -o qgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rgamma.c -o rgamma.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dbeta.c -o dbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pbeta.c -o pbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qbeta.c -o qbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rbeta.c -o rbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dunif.c -o dunif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c punif.c -o punif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qunif.c -o qunif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c runif.c -o runif.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnorm.c -o dnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnorm.c -o pnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnorm.c -o qnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnorm.c -o rnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dlnorm.c -o dlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c plnorm.c -o plnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qlnorm.c -o qlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlnorm.c -o rlnorm.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c df.c -o df.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pf.c -o pf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qf.c -o qf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rf.c -o rf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnf.c -o dnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dt.c -o dt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pt.c -o pt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qt.c -o qt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rt.c -o rt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnt.c -o dnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dchisq.c -o dchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pchisq.c -o pchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qchisq.c -o qchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rchisq.c -o rchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnchisq.c -o rnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dbinom.c -o dbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pbinom.c -o pbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qbinom.c -o qbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rbinom.c -o rbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rmultinom.c -o rmultinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dcauchy.c -o dcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pcauchy.c -o pcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qcauchy.c -o qcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rcauchy.c -o rcauchy.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dexp.c -o dexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pexp.c -o pexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qexp.c -o qexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rexp.c -o rexp.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dgeom.c -o dgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pgeom.c -o pgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qgeom.c -o qgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rgeom.c -o rgeom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dhyper.c -o dhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c phyper.c -o phyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qhyper.c -o qhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rhyper.c -o rhyper.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnbinom.c -o dnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnbinom.c -o pnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnbinom.c -o qnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rnbinom.c -o rnbinom.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dpois.c -o dpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ppois.c -o ppois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qpois.c -o qpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rpois.c -o rpois.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dweibull.c -o dweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pweibull.c -o pweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qweibull.c -o qweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rweibull.c -o rweibull.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dlogis.c -o dlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c plogis.c -o plogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qlogis.c -o qlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlogis.c -o rlogis.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnchisq.c -o dnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnchisq.c -o pnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnchisq.c -o qnchisq.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dnbeta.c -o dnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnbeta.c -o pnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnbeta.c -o qnbeta.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnf.c -o pnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c pnt.c -o pnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnf.c -o qnf.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qnt.c -o qnt.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c ptukey.c -o ptukey.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c qtukey.c -o qtukey.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c toms708.c -o toms708.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c wilcox.c -o wilcox.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c signrank.c -o signrank.o | |
| ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o | |
| ranlib libnmath.a | |
| make[3]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| config.status: creating src/unix/Makefile | |
| making Rembedded.d from Rembedded.c | |
| making dynload.d from dynload.c | |
| making sys-unix.d from sys-unix.c | |
| making system.d from system.c | |
| making sys-std.d from sys-std.c | |
| making X11.d from X11.c | |
| make[3]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rembedded.c -o Rembedded.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c dynload.c -o dynload.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c system.c -o system.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sys-unix.c -o sys-unix.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c sys-std.c -o sys-std.o | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -g -O2 -c X11.c -o X11.o | |
| ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o | |
| ranlib libunix.a | |
| make[3]: Leaving directory '/r-source/src/unix' | |
| make[3]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib64 -DR_HOME='"/r-source"' \ | |
| -o Rscript ./Rscript.c | |
| make[3]: Leaving directory '/r-source/src/unix' | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/main' | |
| config.status: creating src/main/Makefile | |
| making CommandLineArgs.d from CommandLineArgs.c | |
| making Rdynload.d from Rdynload.c | |
| making Renviron.d from Renviron.c | |
| making RNG.d from RNG.c | |
| making agrep.d from agrep.c | |
| making apply.d from apply.c | |
| making array.d from array.c | |
| making arithmetic.d from arithmetic.c | |
| making bind.d from bind.c | |
| making attrib.d from attrib.c | |
| making builtin.d from builtin.c | |
| making character.d from character.c | |
| making coerce.d from coerce.c | |
| making colors.d from colors.c | |
| making complex.d from complex.c | |
| making connections.d from connections.c | |
| making context.d from context.c | |
| making cum.d from cum.c | |
| making dcf.d from dcf.c | |
| making datetime.d from datetime.c | |
| making debug.d from debug.c | |
| making deparse.d from deparse.c | |
| making devices.d from devices.c | |
| making dotcode.d from dotcode.c | |
| making dounzip.d from dounzip.c | |
| making dstruct.d from dstruct.c | |
| making duplicate.d from duplicate.c | |
| making edit.d from edit.c | |
| making engine.d from engine.c | |
| making errors.d from errors.c | |
| making envir.d from envir.c | |
| making eval.d from eval.c | |
| making format.d from format.c | |
| making gevents.d from gevents.c | |
| making gram.d from gram.c | |
| making graphics.d from graphics.c | |
| making gram-ex.d from gram-ex.c | |
| making grep.d from grep.c | |
| making identical.d from identical.c | |
| making inspect.d from inspect.c | |
| making inlined.d from inlined.c | |
| making internet.d from internet.c | |
| making iosupport.d from iosupport.c | |
| making lapack.d from lapack.c | |
| making list.d from list.c | |
| making localecharset.d from localecharset.c | |
| making logic.d from logic.c | |
| making main.d from main.c | |
| making mapply.d from mapply.c | |
| making match.d from match.c | |
| making memory.d from memory.c | |
| making names.d from names.c | |
| making objects.d from objects.c | |
| making options.d from options.c | |
| making paste.d from paste.c | |
| making platform.d from platform.c | |
| making plot.d from plot.c | |
| making plot3d.d from plot3d.c | |
| making plotmath.d from plotmath.c | |
| making print.d from print.c | |
| making printarray.d from printarray.c | |
| making printvector.d from printvector.c | |
| making printutils.d from printutils.c | |
| making qsort.d from qsort.c | |
| making radixsort.d from radixsort.c | |
| making random.d from random.c | |
| making raw.d from raw.c | |
| making registration.d from registration.c | |
| making relop.d from relop.c | |
| making rlocale.d from rlocale.c | |
| making saveload.d from saveload.c | |
| making scan.d from scan.c | |
| making seq.d from seq.c | |
| making serialize.d from serialize.c | |
| making sort.d from sort.c | |
| making source.d from source.c | |
| making split.d from split.c | |
| making sprintf.d from sprintf.c | |
| making startup.d from startup.c | |
| making subassign.d from subassign.c | |
| making subscript.d from subscript.c | |
| making subset.d from subset.c | |
| making summary.d from summary.c | |
| making sysutils.d from sysutils.c | |
| making times.d from times.c | |
| making unique.d from unique.c | |
| making util.d from util.c | |
| making version.d from version.c | |
| making g_cntrlify.d from g_cntrlify.c | |
| making g_alab_her.d from g_alab_her.c | |
| making g_fontdb.d from g_fontdb.c | |
| making g_her_glyph.d from g_her_glyph.c | |
| making Rmain.d from Rmain.c | |
| making alloca.d from alloca.c | |
| making mkdtemp.d from mkdtemp.c | |
| making strdup.d from strdup.c | |
| making strncasecmp.d from strncasecmp.c | |
| make[3]: Entering directory '/r-source/src/main' | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rmain.c -o Rmain.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c CommandLineArgs.c -o CommandLineArgs.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Rdynload.c -o Rdynload.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c Renviron.c -o Renviron.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c RNG.c -o RNG.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c agrep.c -o agrep.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c apply.c -o apply.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c arithmetic.c -o arithmetic.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c array.c -o array.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c attrib.c -o attrib.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c bind.c -o bind.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c builtin.c -o builtin.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c character.c -o character.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c coerce.c -o coerce.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c colors.c -o colors.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c complex.c -o complex.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c connections.c -o connections.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c context.c -o context.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c cum.c -o cum.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dcf.c -o dcf.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c datetime.c -o datetime.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c debug.c -o debug.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c deparse.c -o deparse.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c devices.c -o devices.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dotcode.c -o dotcode.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dounzip.c -o dounzip.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c dstruct.c -o dstruct.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c duplicate.c -o duplicate.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c edit.c -o edit.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c engine.c -o engine.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c envir.c -o envir.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c errors.c -o errors.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c eval.c -o eval.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c format.c -o format.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gevents.c -o gevents.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gram.c -o gram.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c gram-ex.c -o gram-ex.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c graphics.c -o graphics.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c grep.c -o grep.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c identical.c -o identical.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c inlined.c -o inlined.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c inspect.c -o inspect.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c internet.c -o internet.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c iosupport.c -o iosupport.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c lapack.c -o lapack.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c list.c -o list.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c localecharset.c -o localecharset.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c logic.c -o logic.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c main.c -o main.o | |
| [01m[Kmain.c:[m[K In function ‘[01m[Kdummy_ii[m[K’: | |
| [01m[Kmain.c:1666:12:[m[K [01;35m[Kwarning: [m[Kfunction returns address of local variable [[01;35m[K-Wreturn-local-addr[m[K] | |
| return [01;35m[K(uintptr_t) &ii[m[K; | |
| [01;35m[K^~~~~~~~~~~~~~~[m[K | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c mapply.c -o mapply.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c match.c -o match.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c memory.c -o memory.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c names.c -o names.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c objects.c -o objects.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c options.c -o options.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c paste.c -o paste.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c platform.c -o platform.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plot.c -o plot.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plot3d.c -o plot3d.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c plotmath.c -o plotmath.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c print.c -o print.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printarray.c -o printarray.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printvector.c -o printvector.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c printutils.c -o printutils.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c qsort.c -o qsort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c radixsort.c -o radixsort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c random.c -o random.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c raw.c -o raw.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c registration.c -o registration.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c relop.c -o relop.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c rlocale.c -o rlocale.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c saveload.c -o saveload.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c scan.c -o scan.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c seq.c -o seq.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c serialize.c -o serialize.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sort.c -o sort.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c source.c -o source.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c split.c -o split.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sprintf.c -o sprintf.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c startup.c -o startup.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subassign.c -o subassign.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subscript.c -o subscript.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c subset.c -o subset.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c summary.c -o summary.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c sysutils.c -o sysutils.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c times.c -o times.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c unique.c -o unique.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c util.c -o util.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c version.c -o version.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_alab_her.c -o g_alab_her.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_cntrlify.c -o g_cntrlify.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_fontdb.c -o g_fontdb.o | |
| gcc -I../../src/extra -I. -I../../src/include -I../../src/include -I/usr/local/include -I../../src/nmath -DHAVE_CONFIG_H -fopenmp -g -O2 -c g_her_glyph.c -o g_her_glyph.o | |
| f95 -fopenmp -g -O2 -c xxxpr.f -o xxxpr.o | |
| ar -cr libR.a CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o libs/*o | |
| ranlib libR.a | |
| gcc -Wl,--export-dynamic -fopenmp -L/usr/local/lib64 -o R.bin Rmain.o CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a -L../../lib -lRblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n | |
| make[4]: Entering directory '/r-source/src/main' | |
| mkdir -p -- /r-source/bin/exec | |
| make[4]: Leaving directory '/r-source/src/main' | |
| make[3]: Leaving directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| making devX11.d from devX11.c | |
| making Lapack.d from Lapack.c | |
| making Rhttpd.d from Rhttpd.c | |
| making Rsock.d from Rsock.c | |
| making rotated.d from rotated.c | |
| making internet.d from internet.c | |
| make[4]: Entering directory '/r-source/src/modules/lapack' | |
| f95 -fpic -g -O2 -ffloat-store -c dlamch.f -o dlamch.o | |
| making rbitmap.d from rbitmap.c | |
| making nanoftp.d from nanoftp.c | |
| f95 -fopenmp -fpic -g -O2 -c dlapack.f -o dlapack.o | |
| making libcurl.d from libcurl.c | |
| f95 -fopenmp -fpic -g -O2 -c cmplx.f -o cmplx.o | |
| make[4]: Entering directory '/r-source/src/modules/X11' | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c devX11.c -o devX11.o | |
| making nanohttp.d from nanohttp.c | |
| making sock.d from sock.c | |
| making sockconn.d from sockconn.c | |
| make[4]: Entering directory '/r-source/src/modules/internet' | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rhttpd.c -o Rhttpd.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c Rsock.c -o Rsock.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c internet.c -o internet.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c libcurl.c -o libcurl.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rotated.c -o rotated.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanoftp.c -o nanoftp.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c nanohttp.c -o nanohttp.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c rbitmap.c -o rbitmap.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sock.c -o sock.o | |
| gcc -I/usr/include/libpng16 -I/usr/include/x86_64-linux-gnu -I. -I../../../src/include -I../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../src/library/grDevices/src/cairo -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c dataentry.c -o dataentry.o | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -fvisibility=hidden -c sockconn.c -o sockconn.o | |
| gcc -shared -L/usr/local/lib64 -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl | |
| make[5]: Entering directory '/r-source/src/modules/internet' | |
| mkdir -p -- /r-source/modules | |
| make[5]: Leaving directory '/r-source/src/modules/internet' | |
| make[4]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| gcc -shared -L/usr/local/lib64 -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lm | |
| gcc -shared -L/usr/local/lib64 -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -lX11 -lXt -lm | |
| make[4]: Leaving directory '/r-source/src/modules/X11' | |
| make[4]: Entering directory '/r-source/src/modules/X11' | |
| make[4]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| gcc -shared -fopenmp -L/usr/local/lib64 -o libRlapack.so dlamch.o dlapack.o cmplx.o -L../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[4]: Leaving directory '/r-source/src/modules/lapack' | |
| make[4]: Entering directory '/r-source/src/modules/lapack' | |
| gcc -I. -I../../../src/include -I../../../src/include -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c Lapack.c -o Lapack.o | |
| gcc -shared -L/usr/local/lib64 -o lapack.so Lapack.o -L../../../lib -lRlapack -L../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[5]: Entering directory '/r-source/src/modules/lapack' | |
| /r-source/lib/libRlapack.so is unchanged | |
| make[5]: Leaving directory '/r-source/src/modules/lapack' | |
| make[4]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/library' | |
| mkdir -p -- ../../library | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| building system startup profile | |
| mkdir -p -- ../../../library/base/R | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| building package 'translations' | |
| mkdir -p -- ../../../library/translations | |
| make[4]: Entering directory '/r-source/src/library/translations' | |
| make[4]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| building package 'base' | |
| make[4]: Entering directory '/r-source/src/library/base' | |
| mkdir -p -- ../../../library/base/demo | |
| make[4]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| building package 'tools' | |
| mkdir -p -- ../../../library/tools | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| mkdir -p -- ../../../library/tools/R | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| make[5]: Entering directory '/r-source/src/library/tools/src' | |
| making text.d from text.c | |
| making Rmd5.d from Rmd5.c | |
| making init.d from init.c | |
| making md5.d from md5.c | |
| making signals.d from signals.c | |
| making install.d from install.c | |
| making http.d from http.c | |
| making getfmts.d from getfmts.c | |
| making gramLatex.d from gramLatex.c | |
| making gramRd.d from gramRd.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c text.c -o text.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c Rmd5.c -o Rmd5.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c md5.c -o md5.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c signals.c -o signals.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c install.c -o install.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c getfmts.c -o getfmts.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c http.c -o http.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gramLatex.c -o gramLatex.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gramRd.c -o gramRd.o | |
| gcc -shared -L/usr/local/lib64 -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o | |
| make[6]: Entering directory '/r-source/src/library/tools/src' | |
| mkdir -p -- ../../../../library/tools/libs | |
| make[6]: Leaving directory '/r-source/src/library/tools/src' | |
| make[5]: Leaving directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools' | |
| installing 'sysdata.rda' | |
| make[4]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| building package 'compiler' | |
| mkdir -p -- ../../../library/compiler | |
| make[4]: Entering directory '/r-source/src/library/compiler' | |
| mkdir -p -- ../../../library/compiler/R | |
| make[4]: Leaving directory '/r-source/src/library/compiler' | |
| make[4]: Entering directory '/r-source/src/library/compiler' | |
| byte-compiling package 'compiler' | |
| make[4]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| byte-compiling package 'base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| byte-compiling package 'tools' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| building package 'utils' | |
| mkdir -p -- ../../../library/utils | |
| mkdir -p -- ../../../library/utils/doc | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| mkdir -p -- ../../../library/utils/R | |
| mkdir -p -- ../../../library/utils/Sweave | |
| mkdir -p -- ../../../library/utils/misc | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| make[5]: Entering directory '/r-source/src/library/utils/src' | |
| making init.d from init.c | |
| making io.d from io.c | |
| making size.d from size.c | |
| making sock.d from sock.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making stubs.d from stubs.c | |
| making utils.d from utils.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c io.c -o io.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c size.c -o size.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c sock.c -o sock.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stubs.c -o stubs.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o utils.so init.o io.o size.o sock.o stubs.o utils.o | |
| make[6]: Entering directory '/r-source/src/library/utils/src' | |
| mkdir -p -- ../../../../library/utils/libs | |
| make[6]: Leaving directory '/r-source/src/library/utils/src' | |
| make[5]: Leaving directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| installing 'sysdata.rda' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils' | |
| byte-compiling package 'utils' | |
| make[4]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| building package 'grDevices' | |
| mkdir -p -- ../../../library/grDevices | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| mkdir -p -- ../../../library/grDevices/R | |
| mkdir -p -- ../../../library/grDevices/afm | |
| mkdir -p -- ../../../library/grDevices/enc | |
| mkdir -p -- ../../../library/grDevices/icc | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src' | |
| making axis_scales.d from axis_scales.c | |
| making chull.d from chull.c | |
| making devices.d from devices.c | |
| making init.d from init.c | |
| making stubs.d from stubs.c | |
| making colors.d from colors.c | |
| making devCairo.d from devCairo.c | |
| making devPicTeX.d from devPicTeX.c | |
| making devPS.d from devPS.c | |
| making devQuartz.d from devQuartz.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c axis_scales.c -o axis_scales.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c chull.c -o chull.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devices.c -o devices.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c stubs.c -o stubs.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c colors.c -o colors.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devCairo.c -o devCairo.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devPicTeX.c -o devPicTeX.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devPS.c -o devPS.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fpic -g -O2 -c devQuartz.c -o devQuartz.o | |
| gcc -shared -L/usr/local/lib64 -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz | |
| make[6]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[7]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| mkdir -p -- ../../../../library/grDevices/libs | |
| making cairoBM.d from cairoBM.c | |
| make[8]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[9]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| gcc -I. -I../../../../../src/include -I../../../../../src/include -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng16 -I../../../../../src/modules/X11 -I/usr/local/include -DHAVE_CONFIG_H -fopenmp -fpic -g -O2 -c cairoBM.c -o cairoBM.o | |
| gcc -shared -L/usr/local/lib64 -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lm | |
| make[9]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[8]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[7]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[6]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices' | |
| byte-compiling package 'grDevices' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| building package 'graphics' | |
| mkdir -p -- ../../../library/graphics | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| mkdir -p -- ../../../library/graphics/R | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| make[5]: Entering directory '/r-source/src/library/graphics/src' | |
| making init.d from init.c | |
| making base.d from base.c | |
| making par.d from par.c | |
| making graphics.d from graphics.c | |
| making plot.d from plot.c | |
| making plot3d.d from plot3d.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making stem.d from stem.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c base.c -o base.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c graphics.c -o graphics.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c par.c -o par.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c plot.c -o plot.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c plot3d.c -o plot3d.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I../../../../src/main -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c stem.c -o stem.o | |
| gcc -shared -L/usr/local/lib64 -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o | |
| make[6]: Entering directory '/r-source/src/library/graphics/src' | |
| mkdir -p -- ../../../../library/graphics/libs | |
| make[6]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[5]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics' | |
| byte-compiling package 'graphics' | |
| make[4]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| building package 'stats' | |
| mkdir -p -- ../../../library/stats | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| mkdir -p -- ../../../library/stats/R | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| make[5]: Entering directory '/r-source/src/library/stats/src' | |
| making init.d from init.c | |
| making ansari.d from ansari.c | |
| making bandwidths.d from bandwidths.c | |
| making kmeans.d from kmeans.c | |
| making chisqsim.d from chisqsim.c | |
| making d2x2xk.d from d2x2xk.c | |
| making fexact.d from fexact.c | |
| making kendall.d from kendall.c | |
| making ks.d from ks.c | |
| making prho.d from prho.c | |
| making smooth.d from smooth.c | |
| making line.d from line.c | |
| making swilk.d from swilk.c | |
| making ksmooth.d from ksmooth.c | |
| making loessc.d from loessc.c | |
| making monoSpl.d from monoSpl.c | |
| making isoreg.d from isoreg.c | |
| making Srunmed.d from Srunmed.c | |
| making dblcen.d from dblcen.c | |
| making distance.d from distance.c | |
| making hclust-utils.d from hclust-utils.c | |
| making nls.d from nls.c | |
| making rWishart.d from rWishart.c | |
| making HoltWinters.d from HoltWinters.c | |
| making PPsum.d from PPsum.c | |
| making arima.d from arima.c | |
| making burg.d from burg.c | |
| making filter.d from filter.c | |
| making mAR.d from mAR.c | |
| making pacf.d from pacf.c | |
| making starma.d from starma.c | |
| making port.d from port.c | |
| making family.d from family.c | |
| making sbart.d from sbart.c | |
| making approx.d from approx.c | |
| making loglin.d from loglin.c | |
| making lowess.d from lowess.c | |
| making massdist.d from massdist.c | |
| making splines.d from splines.c | |
| making lm.d from lm.c | |
| making complete_cases.d from complete_cases.c | |
| making cov.d from cov.c | |
| making deriv.d from deriv.c | |
| making fft.d from fft.c | |
| making fourier.d from fourier.c | |
| making model.d from model.c | |
| making optim.d from optim.c | |
| making optimize.d from optimize.c | |
| making integrate.d from integrate.c | |
| making random.d from random.c | |
| making distn.d from distn.c | |
| making zeroin.d from zeroin.c | |
| making rcont.d from rcont.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making influence.d from influence.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c kmeans.c -o kmeans.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ansari.c -o ansari.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c bandwidths.c -o bandwidths.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c chisqsim.c -o chisqsim.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c d2x2xk.c -o d2x2xk.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fexact.c -o fexact.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c kendall.c -o kendall.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ks.c -o ks.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c line.c -o line.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c smooth.c -o smooth.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c prho.c -o prho.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c swilk.c -o swilk.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c ksmooth.c -o ksmooth.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c loessc.c -o loessc.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c monoSpl.c -o monoSpl.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c isoreg.c -o isoreg.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c Srunmed.c -o Srunmed.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c dblcen.c -o dblcen.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c distance.c -o distance.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c hclust-utils.c -o hclust-utils.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c nls.c -o nls.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c rWishart.c -o rWishart.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c HoltWinters.c -o HoltWinters.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c PPsum.c -o PPsum.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c arima.c -o arima.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c burg.c -o burg.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c filter.c -o filter.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c mAR.c -o mAR.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c pacf.c -o pacf.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c starma.c -o starma.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c port.c -o port.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c family.c -o family.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c sbart.c -o sbart.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c approx.c -o approx.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c loglin.c -o loglin.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c lowess.c -o lowess.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c massdist.c -o massdist.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c splines.c -o splines.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c lm.c -o lm.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c complete_cases.c -o complete_cases.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c cov.c -o cov.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c deriv.c -o deriv.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fft.c -o fft.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c fourier.c -o fourier.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c model.c -o model.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c optim.c -o optim.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c optimize.c -o optimize.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c integrate.c -o integrate.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c random.c -o random.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c distn.c -o distn.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c zeroin.c -o zeroin.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c rcont.c -o rcont.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fopenmp -fvisibility=hidden -fpic -g -O2 -c influence.c -o influence.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bsplvd.f -o bsplvd.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bvalue.f -o bvalue.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c bvalus.f -o bvalus.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c loessf.f -o loessf.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c ppr.f -o ppr.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c qsbart.f -o qsbart.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sgram.f -o sgram.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sinerp.f -o sinerp.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c sslvrg.f -o sslvrg.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c stxwx.f -o stxwx.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c hclust.f -o hclust.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c kmns.f -o kmns.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c eureka.f -o eureka.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c stl.f -o stl.o | |
| f95 -fpic -g -O2 -ffloat-store -c portsrc.f -o portsrc.o | |
| f95 -fvisibility=hidden -fpic -g -O2 -c lminfl.f -o lminfl.o | |
| gcc -shared -L/usr/local/lib64 -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -L../../../../lib -lRlapack -L../../../../lib -lRblas -lgfortran -lm -lquadmath | |
| make[6]: Entering directory '/r-source/src/library/stats/src' | |
| mkdir -p -- ../../../../library/stats/libs | |
| make[6]: Leaving directory '/r-source/src/library/stats/src' | |
| make[5]: Leaving directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats' | |
| byte-compiling package 'stats' | |
| make[4]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| building package 'datasets' | |
| mkdir -p -- ../../../library/datasets | |
| make[4]: Entering directory '/r-source/src/library/datasets' | |
| make[4]: Leaving directory '/r-source/src/library/datasets' | |
| mkdir -p -- ../../../library/datasets/data | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| building package 'methods' | |
| mkdir -p -- ../../../library/methods | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| mkdir -p -- ../../../library/methods/R | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| make[5]: Entering directory '/r-source/src/library/methods/src' | |
| making do_substitute_direct.d from do_substitute_direct.c | |
| making init.d from init.c | |
| making methods_list_dispatch.d from methods_list_dispatch.c | |
| making slot.d from slot.c | |
| making class_support.d from class_support.c | |
| making tests.d from tests.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c do_substitute_direct.c -o do_substitute_direct.o | |
| making utils.d from utils.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c methods_list_dispatch.c -o methods_list_dispatch.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c slot.c -o slot.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c class_support.c -o class_support.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c tests.c -o tests.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o | |
| make[6]: Entering directory '/r-source/src/library/methods/src' | |
| mkdir -p -- ../../../../library/methods/libs | |
| make[6]: Leaving directory '/r-source/src/library/methods/src' | |
| make[5]: Leaving directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods' | |
| byte-compiling 'methods' | |
| initializing class and method definitions ... done | |
| make[4]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| building package 'grid' | |
| mkdir -p -- ../../../library/grid | |
| mkdir -p -- ../../../library/grid/doc | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| mkdir -p -- ../../../library/grid/R | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| make[5]: Entering directory '/r-source/src/library/grid/src' | |
| making gpar.d from gpar.c | |
| making grid.d from grid.c | |
| making just.d from just.c | |
| making layout.d from layout.c | |
| making matrix.d from matrix.c | |
| making state.d from state.c | |
| making register.d from register.c | |
| making unit.d from unit.c | |
| making util.d from util.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c gpar.c -o gpar.o | |
| making viewport.d from viewport.c | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c grid.c -o grid.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c just.c -o just.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c layout.c -o layout.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c matrix.c -o matrix.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c register.c -o register.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c state.c -o state.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c unit.c -o unit.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c util.c -o util.o | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c viewport.c -o viewport.o | |
| gcc -shared -L/usr/local/lib64 -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o | |
| make[6]: Entering directory '/r-source/src/library/grid/src' | |
| mkdir -p -- ../../../../library/grid/libs | |
| make[6]: Leaving directory '/r-source/src/library/grid/src' | |
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| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid' | |
| byte-compiling package 'grid' | |
| make[4]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| building package 'splines' | |
| mkdir -p -- ../../../library/splines | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| mkdir -p -- ../../../library/splines/R | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines' | |
| make[5]: Entering directory '/r-source/src/library/splines/src' | |
| gcc -I../../../../include -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c splines.c -o splines.o | |
| making splines.d from splines.c | |
| gcc -shared -L/usr/local/lib64 -o splines.so splines.o | |
| make[6]: Entering directory '/r-source/src/library/splines/src' | |
| mkdir -p -- ../../../../library/splines/libs | |
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| make[4]: Entering directory '/r-source/src/library/splines' | |
| byte-compiling package 'splines' | |
| make[4]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| building package 'stats4' | |
| mkdir -p -- ../../../library/stats4 | |
| make[4]: Entering directory '/r-source/src/library/stats4' | |
| mkdir -p -- ../../../library/stats4/R | |
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| make[4]: Entering directory '/r-source/src/library/stats4' | |
| byte-compiling package 'stats4' | |
| make[4]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| building package 'tcltk' | |
| mkdir -p -- ../../../library/tcltk/R | |
| make[4]: Entering directory '/r-source/src/library/tcltk' | |
| mkdir -p -- ../../../library/tcltk/exec | |
| make[4]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| building package 'parallel' | |
| mkdir -p -- ../../../library/parallel | |
| mkdir -p -- ../../../library/parallel/doc | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| mkdir -p -- ../../../library/parallel/R | |
| make[4]: Leaving directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel' | |
| make[5]: Entering directory '/r-source/src/library/parallel/src' | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c init.c -o init.o | |
| making init.d from init.c | |
| making rngstream.d from rngstream.c | |
| making fork.d from fork.c | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c rngstream.c -o rngstream.o | |
| gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../src/include -DHAVE_CONFIG_H -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -c fork.c -o fork.o | |
| gcc -shared -L/usr/local/lib64 -o parallel.so init.o rngstream.o fork.o | |
| make[6]: Entering directory '/r-source/src/library/parallel/src' | |
| mkdir -p -- ../../../../library/parallel/libs | |
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| make[4]: Entering directory '/r-source/src/library/parallel' | |
| byte-compiling package 'parallel' | |
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| make[3]: Entering directory '/r-source/src/library/base' | |
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| installing parsed NAMESPACE files | |
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| make[1]: Entering directory '/r-source/tests' | |
| make[1]: Nothing to be done for 'R'. | |
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| you should 'make docs' now ... | |
| make[1]: Entering directory '/r-source' | |
| make[1]: Entering directory '/r-source/doc' | |
| configuring Java ... | |
| Java interpreter : /usr/bin/java | |
| Java version : 1.8.0_121 | |
| Java home path : /usr/lib/jvm/java-8-openjdk-amd64/jre | |
| Java compiler : /usr/bin/javac | |
| Java headers gen.: /usr/bin/javah | |
| Java archive tool: /usr/bin/jar | |
| trying to compile and link a JNI program | |
| detected JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux | |
| detected JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm | |
| make[2]: Entering directory '/tmp/Rjavareconf.iDQ8SA' | |
| gcc -I/r-source/include -DNDEBUG -I/usr/lib/jvm/java-8-openjdk-amd64/jre/../include -I/usr/lib/jvm/java-8-openjdk-amd64/jre/../include/linux -I/usr/local/include -fpic -g -O2 -c conftest.c -o conftest.o | |
| gcc -shared -L/usr/local/lib64 -o conftest.so conftest.o -L/usr/lib/jvm/java-8-openjdk-amd64/jre/lib/amd64/server -ljvm | |
| make[2]: Leaving directory '/tmp/Rjavareconf.iDQ8SA' | |
| JAVA_HOME : /usr/lib/jvm/java-8-openjdk-amd64/jre | |
| Java library path: $(JAVA_HOME)/lib/amd64/server | |
| JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux | |
| JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm | |
| Updating Java configuration in /r-source | |
| Done. | |
| make[1]: Leaving directory '/r-source' | |
| creating doc/NEWS | |
| creating doc/NEWS.pdf | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| creating doc/manual/R-FAQ.html | |
| creating doc/manual/version.texi | |
| creating doc/manual/R-admin.html | |
| creating doc/manual/R-data.html | |
| creating doc/manual/R-exts.html | |
| creating doc/manual/R-intro.html | |
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| creating doc/manual/R-lang.html | |
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| make[1]: Entering directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/library' | |
| installing parsed Rd | |
| make[3]: Entering directory '/r-source/src/library' | |
| methods | |
| utils | |
| grDevices | |
| graphics | |
| datasets | |
| grid | |
| tcltk | |
| tools | |
| splines | |
| stats | |
| compiler | |
| stats4 | |
| parallel | |
| base | |
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| writing package indices | |
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| make[1]: Nothing to be done for 'all'. | |
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| processing 'plotexample.Rnw' | |
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| processing 'Sweave.Rnw' | |
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| mkdir -p -- /usr/local/lib64/R | |
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| make[1]: Entering directory '/r-source/tools' | |
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| make[1]: Entering directory '/r-source/doc' | |
| installing doc ... | |
| mkdir -p -- /usr/local/lib64/R/doc | |
| make[2]: Entering directory '/r-source/doc/html' | |
| installing doc/html ... | |
| mkdir -p -- /usr/local/lib64/R/doc/html | |
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| make[2]: Entering directory '/r-source/doc/manual' | |
| installing doc/manual ... | |
| mkdir -p -- /usr/local/lib64/R/doc/manual | |
| mkdir -p -- /usr/local/lib64/R/doc/manual/images | |
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| mkdir -p -- /usr/local/lib64/R/etc | |
| installing etc ... | |
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| installing share ... | |
| mkdir -p -- /usr/local/lib64/R/share | |
| mkdir -p -- /usr/local/lib64/R/share/R | |
| mkdir -p -- /usr/local/lib64/R/share/dictionaries | |
| mkdir -p -- /usr/local/lib64/R/share/encodings | |
| mkdir -p -- /usr/local/lib64/R/share/java | |
| mkdir -p -- /usr/local/lib64/R/share/licenses | |
| mkdir -p -- /usr/local/lib64/R/share/make | |
| mkdir -p -- /usr/local/lib64/R/share/Rd | |
| mkdir -p -- /usr/local/lib64/R/share/Rd/macros | |
| mkdir -p -- /usr/local/lib64/R/share/sh | |
| mkdir -p -- /usr/local/lib64/R/share/texmf | |
| mkdir -p -- /usr/local/lib64/R/share/texmf/bibtex/bib | |
| mkdir -p -- /usr/local/lib64/R/share/texmf/bibtex/bst | |
| mkdir -p -- /usr/local/lib64/R/share/texmf/tex/latex | |
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| make[3]: Entering directory '/r-source/src/include/R_ext' | |
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| make[3]: Entering directory '/r-source/src/extra/tre' | |
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| make[3]: Entering directory '/r-source/src/extra/intl' | |
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| make[2]: Nothing to be done for 'install'. | |
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| make[2]: Nothing to be done for 'install'. | |
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| make[2]: Entering directory '/r-source/src/unix' | |
| gcc -I. -I../../src/include -I../../src/include -I/usr/local/include -DHAVE_CONFIG_H -g -O2 -L/usr/local/lib64 -DR_HOME='"/usr/local/lib64/R"' \ | |
| -o Rscript ./Rscript.c | |
| make[2]: Leaving directory '/r-source/src/unix' | |
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| mkdir -p -- /usr/local/lib64/R/bin/exec | |
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| make[3]: Entering directory '/r-source/src/modules/internet' | |
| mkdir -p -- /usr/local/lib64/R/modules | |
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| make[3]: Entering directory '/r-source/src/modules/lapack' | |
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| mkdir -p -- /usr/local/lib64/R/library | |
| installing packages ... | |
| building HTML index ... | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[1]: Leaving directory '/r-source/src' | |
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| make[2]: Entering directory '/r-source/tests/Embedding' | |
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| make[2]: Entering directory '/r-source/tests/Examples' | |
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| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/library' | |
| make[3]: Entering directory '/r-source/src/library/Recommended' | |
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| make[3]: Entering directory '/r-source/src/library/translations' | |
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| make[3]: Entering directory '/r-source/src/library/parallel' | |
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| make[3]: Entering directory '/r-source/src/library/tcltk' | |
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| make[3]: Entering directory '/r-source/src/library/splines' | |
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| make[3]: Entering directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
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| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
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| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
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| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
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| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
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| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| make[3]: Nothing to be done for 'clean'. | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/main' | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
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| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
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| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/include' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Nothing to be done for 'clean'. | |
| make[1]: Leaving directory '/r-source/m4' | |
| make[1]: Entering directory '/r-source/tests' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
| make[2]: Leaving directory '/r-source/tests/Embedding' | |
| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[2]: Entering directory '/r-source/tests/Embedding' | |
| make[2]: Leaving directory '/r-source/tests/Embedding' | |
| make[2]: Entering directory '/r-source/tests/Examples' | |
| make[2]: Leaving directory '/r-source/tests/Examples' | |
| make[1]: Leaving directory '/r-source/tests' | |
| make[1]: Entering directory '/r-source/src' | |
| make[2]: Entering directory '/r-source/src/library' | |
| make[3]: Entering directory '/r-source/src/library/Recommended' | |
| make[3]: Leaving directory '/r-source/src/library/Recommended' | |
| make[3]: Entering directory '/r-source/src/library/translations' | |
| make[3]: Leaving directory '/r-source/src/library/translations' | |
| make[3]: Entering directory '/r-source/src/library/parallel' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[4]: Entering directory '/r-source/src/library/parallel/src' | |
| make[4]: Leaving directory '/r-source/src/library/parallel/src' | |
| make[3]: Leaving directory '/r-source/src/library/parallel' | |
| make[3]: Entering directory '/r-source/src/library/compiler' | |
| make[3]: Leaving directory '/r-source/src/library/compiler' | |
| make[3]: Entering directory '/r-source/src/library/tcltk' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[4]: Entering directory '/r-source/src/library/tcltk/src' | |
| make[4]: Leaving directory '/r-source/src/library/tcltk/src' | |
| make[3]: Leaving directory '/r-source/src/library/tcltk' | |
| make[3]: Entering directory '/r-source/src/library/stats4' | |
| make[3]: Leaving directory '/r-source/src/library/stats4' | |
| make[3]: Entering directory '/r-source/src/library/splines' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[4]: Entering directory '/r-source/src/library/splines/src' | |
| make[4]: Leaving directory '/r-source/src/library/splines/src' | |
| make[3]: Leaving directory '/r-source/src/library/splines' | |
| make[3]: Entering directory '/r-source/src/library/grid' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[4]: Entering directory '/r-source/src/library/grid/src' | |
| make[4]: Leaving directory '/r-source/src/library/grid/src' | |
| make[3]: Leaving directory '/r-source/src/library/grid' | |
| make[3]: Entering directory '/r-source/src/library/methods' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[4]: Entering directory '/r-source/src/library/methods/src' | |
| make[4]: Leaving directory '/r-source/src/library/methods/src' | |
| make[3]: Leaving directory '/r-source/src/library/methods' | |
| make[3]: Entering directory '/r-source/src/library/datasets' | |
| make[3]: Leaving directory '/r-source/src/library/datasets' | |
| make[3]: Entering directory '/r-source/src/library/stats' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[4]: Entering directory '/r-source/src/library/stats/src' | |
| make[4]: Leaving directory '/r-source/src/library/stats/src' | |
| make[3]: Leaving directory '/r-source/src/library/stats' | |
| make[3]: Entering directory '/r-source/src/library/graphics' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[4]: Entering directory '/r-source/src/library/graphics/src' | |
| make[4]: Leaving directory '/r-source/src/library/graphics/src' | |
| make[3]: Leaving directory '/r-source/src/library/graphics' | |
| make[3]: Entering directory '/r-source/src/library/grDevices' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[4]: Entering directory '/r-source/src/library/grDevices/src' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Entering directory '/r-source/src/library/grDevices/src/cairo' | |
| make[5]: Leaving directory '/r-source/src/library/grDevices/src/cairo' | |
| make[4]: Leaving directory '/r-source/src/library/grDevices/src' | |
| make[3]: Leaving directory '/r-source/src/library/grDevices' | |
| make[3]: Entering directory '/r-source/src/library/utils' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[4]: Entering directory '/r-source/src/library/utils/src' | |
| make[4]: Leaving directory '/r-source/src/library/utils/src' | |
| make[3]: Leaving directory '/r-source/src/library/utils' | |
| make[3]: Entering directory '/r-source/src/library/tools' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[4]: Entering directory '/r-source/src/library/tools/src' | |
| make[4]: Leaving directory '/r-source/src/library/tools/src' | |
| make[3]: Leaving directory '/r-source/src/library/tools' | |
| make[3]: Entering directory '/r-source/src/library/base' | |
| make[3]: Leaving directory '/r-source/src/library/base' | |
| make[3]: Entering directory '/r-source/src/library/profile' | |
| make[3]: Leaving directory '/r-source/src/library/profile' | |
| make[2]: Leaving directory '/r-source/src/library' | |
| make[2]: Entering directory '/r-source/src/modules' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[3]: Entering directory '/r-source/src/modules/X11' | |
| make[3]: Leaving directory '/r-source/src/modules/X11' | |
| make[3]: Entering directory '/r-source/src/modules/internet' | |
| make[3]: Leaving directory '/r-source/src/modules/internet' | |
| make[3]: Entering directory '/r-source/src/modules/lapack' | |
| make[3]: Leaving directory '/r-source/src/modules/lapack' | |
| make[2]: Leaving directory '/r-source/src/modules' | |
| make[2]: Entering directory '/r-source/src/main' | |
| (cd ../include; make Rversion.h) | |
| make[3]: Entering directory '/r-source/src/include' | |
| make[3]: Leaving directory '/r-source/src/include' | |
| config.status: creating src/main/Makefile | |
| make[2]: Leaving directory '/r-source/src/main' | |
| make[2]: Entering directory '/r-source/src/unix' | |
| config.status: creating src/unix/Makefile | |
| make[2]: Leaving directory '/r-source/src/unix' | |
| make[2]: Entering directory '/r-source/src/nmath' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[3]: Entering directory '/r-source/src/nmath/standalone' | |
| make[3]: Leaving directory '/r-source/src/nmath/standalone' | |
| make[2]: Leaving directory '/r-source/src/nmath' | |
| make[2]: Entering directory '/r-source/src/appl' | |
| make[2]: Leaving directory '/r-source/src/appl' | |
| make[2]: Entering directory '/r-source/src/extra' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[3]: Entering directory '/r-source/src/extra/blas' | |
| make[3]: Leaving directory '/r-source/src/extra/blas' | |
| make[3]: Entering directory '/r-source/src/extra/tre' | |
| make[3]: Leaving directory '/r-source/src/extra/tre' | |
| make[3]: Entering directory '/r-source/src/extra/xdr' | |
| make[3]: Leaving directory '/r-source/src/extra/xdr' | |
| make[3]: Entering directory '/r-source/src/extra/intl' | |
| make[3]: Leaving directory '/r-source/src/extra/intl' | |
| make[2]: Leaving directory '/r-source/src/extra' | |
| make[2]: Entering directory '/r-source/src/include' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[3]: Entering directory '/r-source/src/include/R_ext' | |
| make[3]: Leaving directory '/r-source/src/include/R_ext' | |
| make[2]: Leaving directory '/r-source/src/include' | |
| make[2]: Entering directory '/r-source/src/scripts' | |
| make[2]: Leaving directory '/r-source/src/scripts' | |
| make[1]: Leaving directory '/r-source/src' | |
| make[1]: Entering directory '/r-source/share' | |
| make[1]: Leaving directory '/r-source/share' | |
| make[1]: Entering directory '/r-source/etc' | |
| make[1]: Leaving directory '/r-source/etc' | |
| make[1]: Entering directory '/r-source/doc' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[2]: Entering directory '/r-source/doc/html' | |
| make[2]: Leaving directory '/r-source/doc/html' | |
| make[2]: Entering directory '/r-source/doc/manual' | |
| make[2]: Leaving directory '/r-source/doc/manual' | |
| make[1]: Leaving directory '/r-source/doc' | |
| make[1]: Entering directory '/r-source/tools' | |
| make[1]: Leaving directory '/r-source/tools' | |
| make[1]: Entering directory '/r-source/m4' | |
| make[1]: Leaving directory '/r-source/m4' | |
| R Under development (unstable) (2017-01-11 r71960) -- "Unsuffered Consequences" | |
| Copyright (C) 2017 The R Foundation for Statistical Computing | |
| Platform: x86_64-pc-linux-gnu (64-bit) | |
| R is free software and comes with ABSOLUTELY NO WARRANTY. | |
| You are welcome to redistribute it under certain conditions. | |
| Type 'license()' or 'licence()' for distribution details. | |
| Natural language support but running in an English locale | |
| R is a collaborative project with many contributors. | |
| Type 'contributors()' for more information and | |
| 'citation()' on how to cite R or R packages in publications. | |
| Type 'demo()' for some demos, 'help()' for on-line help, or | |
| 'help.start()' for an HTML browser interface to help. | |
| Type 'q()' to quit R. | |
| > install.packages(c('devtools', 'roxygen2', 'testthat', 'Rcpp', 'knitr', 'rmarkdown', 'dplyr', 'RMySQL', 'RSQLite', 'RPostgreSQL'), repos = c(CRAN='https://cloud.r-project.org'), Ncpus=4) | |
| also installing the dependencies ‘mime’, ‘curl’, ‘openssl’, ‘bitops’, ‘backports’, ‘httr’, ‘memoise’, ‘whisker’, ‘digest’, ‘rstudioapi’, ‘jsonlite’, ‘git2r’, ‘withr’, ‘stringr’, ‘stringi’, ‘brew’, ‘R6’, ‘desc’, ‘commonmark’, ‘xml2’, ‘crayon’, ‘praise’, ‘magrittr’, ‘evaluate’, ‘highr’, ‘markdown’, ‘yaml’, ‘htmltools’, ‘caTools’, ‘base64enc’, ‘rprojroot’, ‘assertthat’, ‘tibble’, ‘lazyeval’, ‘DBI’, ‘BH’, ‘plogr’ | |
| trying URL 'https://cloud.r-project.org/src/contrib/mime_0.5.tar.gz' | |
| Content type 'application/x-gzip' length 12634 bytes (12 KB) | |
| ================================================== | |
| downloaded 12 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/curl_2.4.tar.gz' | |
| Content type 'application/x-gzip' length 403058 bytes (393 KB) | |
| ================================================== | |
| downloaded 393 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/openssl_0.9.6.tar.gz' | |
| Content type 'application/x-gzip' length 1239339 bytes (1.2 MB) | |
| ================================================== | |
| downloaded 1.2 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/bitops_1.0-6.tar.gz' | |
| Content type 'application/x-gzip' length 8734 bytes | |
| ================================================== | |
| downloaded 8734 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/backports_1.0.5.tar.gz' | |
| Content type 'application/x-gzip' length 6869 bytes | |
| ================================================== | |
| downloaded 6869 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/httr_1.2.1.tar.gz' | |
| Content type 'application/x-gzip' length 133398 bytes (130 KB) | |
| ================================================== | |
| downloaded 130 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/memoise_1.0.0.tar.gz' | |
| Content type 'application/x-gzip' length 7931 bytes | |
| ================================================== | |
| downloaded 7931 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/whisker_0.3-2.tar.gz' | |
| Content type 'application/x-gzip' length 27707 bytes (27 KB) | |
| ================================================== | |
| downloaded 27 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/digest_0.6.12.tar.gz' | |
| Content type 'application/x-gzip' length 120337 bytes (117 KB) | |
| ================================================== | |
| downloaded 117 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/rstudioapi_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 12024 bytes (11 KB) | |
| ================================================== | |
| downloaded 11 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/jsonlite_1.3.tar.gz' | |
| Content type 'application/x-gzip' length 1060613 bytes (1.0 MB) | |
| ================================================== | |
| downloaded 1.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/git2r_0.18.0.tar.gz' | |
| Content type 'application/x-gzip' length 1122935 bytes (1.1 MB) | |
| ================================================== | |
| downloaded 1.1 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/withr_1.0.2.tar.gz' | |
| Content type 'application/x-gzip' length 11976 bytes (11 KB) | |
| ================================================== | |
| downloaded 11 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/stringr_1.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 94095 bytes (91 KB) | |
| ================================================== | |
| downloaded 91 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/stringi_1.1.3.tar.gz' | |
| Content type 'application/x-gzip' length 3644529 bytes (3.5 MB) | |
| ================================================== | |
| downloaded 3.5 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/brew_1.0-6.tar.gz' | |
| Content type 'application/x-gzip' length 83315 bytes (81 KB) | |
| ================================================== | |
| downloaded 81 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/R6_2.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 203498 bytes (198 KB) | |
| ================================================== | |
| downloaded 198 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/desc_1.1.0.tar.gz' | |
| Content type 'application/x-gzip' length 59568 bytes (58 KB) | |
| ================================================== | |
| downloaded 58 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/commonmark_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 124270 bytes (121 KB) | |
| ================================================== | |
| downloaded 121 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/xml2_1.1.1.tar.gz' | |
| Content type 'application/x-gzip' length 244643 bytes (238 KB) | |
| ================================================== | |
| downloaded 238 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/crayon_1.3.2.tar.gz' | |
| Content type 'application/x-gzip' length 656168 bytes (640 KB) | |
| ================================================== | |
| downloaded 640 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/praise_1.0.0.tar.gz' | |
| Content type 'application/x-gzip' length 6100 bytes | |
| ================================================== | |
| downloaded 6100 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/magrittr_1.5.tar.gz' | |
| Content type 'application/x-gzip' length 200504 bytes (195 KB) | |
| ================================================== | |
| downloaded 195 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/evaluate_0.10.tar.gz' | |
| Content type 'application/x-gzip' length 21914 bytes (21 KB) | |
| ================================================== | |
| downloaded 21 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/highr_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 17294 bytes (16 KB) | |
| ================================================== | |
| downloaded 16 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/markdown_0.7.7.tar.gz' | |
| Content type 'application/x-gzip' length 79427 bytes (77 KB) | |
| ================================================== | |
| downloaded 77 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/yaml_2.1.14.tar.gz' | |
| Content type 'application/x-gzip' length 81095 bytes (79 KB) | |
| ================================================== | |
| downloaded 79 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/htmltools_0.3.5.tar.gz' | |
| Content type 'application/x-gzip' length 44048 bytes (43 KB) | |
| ================================================== | |
| downloaded 43 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/caTools_1.17.1.tar.gz' | |
| Content type 'application/x-gzip' length 63358 bytes (61 KB) | |
| ================================================== | |
| downloaded 61 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/base64enc_0.1-3.tar.gz' | |
| Content type 'application/x-gzip' length 7833 bytes | |
| ================================================== | |
| downloaded 7833 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/rprojroot_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 42063 bytes (41 KB) | |
| ================================================== | |
| downloaded 41 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/assertthat_0.1.tar.gz' | |
| Content type 'application/x-gzip' length 10187 bytes | |
| ================================================== | |
| downloaded 10187 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/tibble_1.2.tar.gz' | |
| Content type 'application/x-gzip' length 54517 bytes (53 KB) | |
| ================================================== | |
| downloaded 53 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/lazyeval_0.2.0.tar.gz' | |
| Content type 'application/x-gzip' length 317272 bytes (309 KB) | |
| ================================================== | |
| downloaded 309 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/DBI_0.6.tar.gz' | |
| Content type 'application/x-gzip' length 611282 bytes (596 KB) | |
| ================================================== | |
| downloaded 596 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/BH_1.62.0-1.tar.gz' | |
| Content type 'application/x-gzip' length 10181096 bytes (9.7 MB) | |
| ================================================== | |
| downloaded 9.7 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/plogr_0.1-1.tar.gz' | |
| Content type 'application/x-gzip' length 7421 bytes | |
| ================================================== | |
| downloaded 7421 bytes | |
| trying URL 'https://cloud.r-project.org/src/contrib/devtools_1.12.0.tar.gz' | |
| Content type 'application/x-gzip' length 466618 bytes (455 KB) | |
| ================================================== | |
| downloaded 455 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/roxygen2_6.0.1.tar.gz' | |
| Content type 'application/x-gzip' length 150580 bytes (147 KB) | |
| ================================================== | |
| downloaded 147 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/testthat_1.0.2.tar.gz' | |
| Content type 'application/x-gzip' length 147298 bytes (143 KB) | |
| ================================================== | |
| downloaded 143 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/Rcpp_0.12.10.tar.gz' | |
| Content type 'application/x-gzip' length 2446049 bytes (2.3 MB) | |
| ================================================== | |
| downloaded 2.3 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/knitr_1.15.1.tar.gz' | |
| Content type 'application/x-gzip' length 1027808 bytes (1003 KB) | |
| ================================================== | |
| downloaded 1003 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/rmarkdown_1.4.tar.gz' | |
| Content type 'application/x-gzip' length 2077472 bytes (2.0 MB) | |
| ================================================== | |
| downloaded 2.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/dplyr_0.5.0.tar.gz' | |
| Content type 'application/x-gzip' length 708476 bytes (691 KB) | |
| ================================================== | |
| downloaded 691 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RMySQL_0.10.11.tar.gz' | |
| Content type 'application/x-gzip' length 54186 bytes (52 KB) | |
| ================================================== | |
| downloaded 52 KB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RSQLite_1.1-2.tar.gz' | |
| Content type 'application/x-gzip' length 2108699 bytes (2.0 MB) | |
| ================================================== | |
| downloaded 2.0 MB | |
| trying URL 'https://cloud.r-project.org/src/contrib/RPostgreSQL_0.4-1.tar.gz' | |
| Content type 'application/x-gzip' length 476204 bytes (465 KB) | |
| ================================================== | |
| downloaded 465 KB | |
| begin installing package ‘mime’ | |
| begin installing package ‘curl’ | |
| begin installing package ‘openssl’ | |
| begin installing package ‘bitops’ | |
| * installing *source* package ‘mime’ ... | |
| ** package ‘mime’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmpx1nb1C/R.INSTALL5b96236394fa/mime/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rawmatch.c -o rawmatch.o | |
| gcc -shared -L/usr/local/lib64 -o mime.so rawmatch.o | |
| make[1]: Leaving directory '/tmp/Rtmpx1nb1C/R.INSTALL5b96236394fa/mime/src' | |
| installing to /usr/local/lib64/R/library/mime/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (mime) | |
| begin installing package ‘backports’ | |
| * installing *source* package ‘bitops’ ... | |
| ** package ‘bitops’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmpk1fQ1C/R.INSTALL5b94725f4805/bitops/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bit-ops.c -o bit-ops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cksum.c -o cksum.o | |
| gcc -shared -L/usr/local/lib64 -o bitops.so bit-ops.o cksum.o | |
| make[1]: Leaving directory '/tmp/Rtmpk1fQ1C/R.INSTALL5b94725f4805/bitops/src' | |
| installing to /usr/local/lib64/R/library/bitops/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (bitops) | |
| begin installing package ‘whisker’ | |
| * installing *source* package ‘backports’ ... | |
| ** package ‘backports’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (backports) | |
| begin installing package ‘digest’ | |
| * installing *source* package ‘whisker’ ... | |
| ** package ‘whisker’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (whisker) | |
| begin installing package ‘rstudioapi’ | |
| * installing *source* package ‘rstudioapi’ ... | |
| ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (rstudioapi) | |
| begin installing package ‘jsonlite’ | |
| * installing *source* package ‘curl’ ... | |
| ** package ‘curl’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu | |
| Using PKG_LIBS=-lcurl | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpWu9HZC/R.INSTALL5b92e5f4e6a/curl/src' | |
| rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c callbacks.c -o callbacks.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c curl.c -o curl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c download.c -o download.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c escape.c -o escape.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c fetch.c -o fetch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c form.c -o form.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c getdate.c -o getdate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c handle.c -o handle.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c ieproxy.c -o ieproxy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c interrupt.c -o interrupt.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c multi.c -o multi.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c nslookup.c -o nslookup.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c reflist.c -o reflist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/x86_64-linux-gnu -I/usr/local/include -fpic -g -O2 -c version.c -o version.o | |
| gcc -shared -L/usr/local/lib64 -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o utils.o version.o -lcurl | |
| make[1]: Leaving directory '/tmp/RtmpWu9HZC/R.INSTALL5b92e5f4e6a/curl/src' | |
| installing to /usr/local/lib64/R/library/curl/libs | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (curl) | |
| begin installing package ‘git2r’ | |
| * installing *source* package ‘openssl’ ... | |
| ** package ‘openssl’ successfully unpacked and MD5 sums checked | |
| Found pkg-config cflags and libs! | |
| Using PKG_CFLAGS= | |
| Using PKG_LIBS=-lssl -lcrypto | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpjF8IZG/R.INSTALL5b9838afe0c2/openssl/src' | |
| rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o openssl.so | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c bignum.c -o bignum.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c cert.c -o cert.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c compatibility.c -o compatibility.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c diffie.c -o diffie.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c envelope.c -o envelope.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c error.c -o error.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c hash.c -o hash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c info.c -o info.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keygen.c -o keygen.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c keys.c -o keys.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c onload.c -o onload.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c openssh.c -o openssh.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c password.c -o password.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pem.c -o pem.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs12.c -o pkcs12.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pkcs7.c -o pkcs7.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rand.c -o rand.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c rsa.c -o rsa.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c signing.c -o signing.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c ssl.c -o ssl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stream.c -o stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c write.c -o write.o | |
| gcc -shared -L/usr/local/lib64 -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o -lssl -lcrypto | |
| make[1]: Leaving directory '/tmp/RtmpjF8IZG/R.INSTALL5b9838afe0c2/openssl/src' | |
| installing to /usr/local/lib64/R/library/openssl/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (openssl) | |
| begin installing package ‘withr’ | |
| * installing *source* package ‘digest’ ... | |
| ** package ‘digest’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpDGBHmK/R.INSTALL5ca963de3b19/digest/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c aes.c -o aes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c crc32.c -o crc32.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c digest.c -o digest.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c md5.c -o md5.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pmurhash.c -o pmurhash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c raes.c -o raes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha1.c -o sha1.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha2.c -o sha2.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sha256.c -o sha256.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c xxhash.c -o xxhash.o | |
| gcc -shared -L/usr/local/lib64 -o digest.so aes.o crc32.o digest.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o xxhash.o | |
| make[1]: Leaving directory '/tmp/RtmpDGBHmK/R.INSTALL5ca963de3b19/digest/src' | |
| installing to /usr/local/lib64/R/library/digest/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (digest) | |
| begin installing package ‘stringi’ | |
| * installing *source* package ‘withr’ ... | |
| ** package ‘withr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (withr) | |
| begin installing package ‘brew’ | |
| * installing *source* package ‘brew’ ... | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (brew) | |
| begin installing package ‘R6’ | |
| * installing *source* package ‘jsonlite’ ... | |
| ** package ‘jsonlite’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpHHw1nc/R.INSTALL5cfc75f9d622/jsonlite/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_array.c -o collapse_array.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_object.c -o collapse_object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c collapse_pretty.c -o collapse_pretty.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c escape_chars.c -o escape_chars.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c integer64_to_na.c -o integer64_to_na.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c is_recordlist.c -o is_recordlist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c is_scalarlist.c -o is_scalarlist.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c modp_numtoa.c -o modp_numtoa.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c null_to_na.c -o null_to_na.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c num_to_char.c -o num_to_char.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c parse.c -o parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c prettify.c -o prettify.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c push_parser.c -o push_parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c r-base64.c -o r-base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c register.c -o register.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c row_collapse.c -o row_collapse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c transpose_list.c -o transpose_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c validate.c -o validate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl.c -o yajl/yajl.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_buf.c -o yajl/yajl_buf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_encode.c -o yajl/yajl_encode.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_gen.c -o yajl/yajl_gen.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_lex.c -o yajl/yajl_lex.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_parser.c -o yajl/yajl_parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Iyajl/api -I/usr/local/include -fpic -g -O2 -c yajl/yajl_tree.c -o yajl/yajl_tree.o | |
| ar rcs libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o | |
| gcc -shared -L/usr/local/lib64 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -L. -lstatyajl | |
| make[1]: Leaving directory '/tmp/RtmpHHw1nc/R.INSTALL5cfc75f9d622/jsonlite/src' | |
| installing to /usr/local/lib64/R/library/jsonlite/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (jsonlite) | |
| begin installing package ‘commonmark’ | |
| * installing *source* package ‘R6’ ... | |
| ** package ‘R6’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (R6) | |
| begin installing package ‘crayon’ | |
| * installing *source* package ‘crayon’ ... | |
| ** package ‘crayon’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (crayon) | |
| begin installing package ‘praise’ | |
| * installing *source* package ‘praise’ ... | |
| ** package ‘praise’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (praise) | |
| begin installing package ‘magrittr’ | |
| * installing *source* package ‘magrittr’ ... | |
| ** package ‘magrittr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** byte-compile and prepare package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (magrittr) | |
| begin installing package ‘highr’ | |
| * installing *source* package ‘highr’ ... | |
| ** package ‘highr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (highr) | |
| begin installing package ‘yaml’ | |
| * installing *source* package ‘commonmark’ ... | |
| ** package ‘commonmark’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmpwl0ea4/R.INSTALL61c845ce8171/commonmark/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions.c -o extensions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c wrapper.c -o wrapper.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/cmark.c -o cmark/cmark.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/node.c -o cmark/node.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/iterator.c -o cmark/iterator.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/blocks.c -o cmark/blocks.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/inlines.c -o cmark/inlines.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/scanners.c -o cmark/scanners.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/utf8.c -o cmark/utf8.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/buffer.c -o cmark/buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/references.c -o cmark/references.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/render.c -o cmark/render.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/man.c -o cmark/man.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/xml.c -o cmark/xml.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/html.c -o cmark/html.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/commonmark.c -o cmark/commonmark.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/latex.c -o cmark/latex.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_href_e.c -o cmark/houdini_href_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_html_e.c -o cmark/houdini_html_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/houdini_html_u.c -o cmark/houdini_html_u.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/cmark_ctype.c -o cmark/cmark_ctype.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/arena.c -o cmark/arena.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/linked_list.c -o cmark/linked_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/plugin.c -o cmark/plugin.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/registry.c -o cmark/registry.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c cmark/syntax_extension.c -o cmark/syntax_extension.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/autolink.c -o extensions/autolink.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/core-extensions.c -o extensions/core-extensions.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/ext_scanners.c -o extensions/ext_scanners.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/strikethrough.c -o extensions/strikethrough.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/table.c -o extensions/table.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -Icmark -I. -I/usr/local/include -fpic -g -O2 -c extensions/tagfilter.c -o extensions/tagfilter.o | |
| ar rcs libstatcmark.a cmark/cmark.o cmark/node.o cmark/iterator.o cmark/blocks.o cmark/inlines.o cmark/scanners.o cmark/utf8.o cmark/buffer.o cmark/references.o cmark/render.o cmark/man.o cmark/xml.o cmark/html.o cmark/commonmark.o cmark/latex.o cmark/houdini_href_e.o cmark/houdini_html_e.o cmark/houdini_html_u.o cmark/cmark_ctype.o cmark/arena.o cmark/html.o cmark/linked_list.o cmark/plugin.o cmark/registry.o cmark/syntax_extension.o extensions/autolink.o extensions/core-extensions.o extensions/ext_scanners.o extensions/strikethrough.o extensions/table.o extensions/tagfilter.o | |
| gcc -shared -L/usr/local/lib64 -o commonmark.so extensions.o wrapper.o -L. -lstatcmark | |
| make[1]: Leaving directory '/tmp/Rtmpwl0ea4/R.INSTALL61c845ce8171/commonmark/src' | |
| installing to /usr/local/lib64/R/library/commonmark/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (commonmark) | |
| begin installing package ‘base64enc’ | |
| * installing *source* package ‘yaml’ ... | |
| ** package ‘yaml’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpZoA8PB/R.INSTALL666962f3dd5/yaml/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c api.c -o api.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dumper.c -o dumper.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c emitter.c -o emitter.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c implicit.c -o implicit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c loader.c -o loader.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c parser.c -o parser.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c r-ext.c -o r-ext.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c reader.c -o reader.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c scanner.c -o scanner.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -DNDEBUG -I/usr/local/include -fpic -g -O2 -c writer.c -o writer.o | |
| gcc -shared -L/usr/local/lib64 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r-ext.o reader.o scanner.o writer.o | |
| make[1]: Leaving directory '/tmp/RtmpZoA8PB/R.INSTALL666962f3dd5/yaml/src' | |
| installing to /usr/local/lib64/R/library/yaml/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (yaml) | |
| begin installing package ‘assertthat’ | |
| * installing *source* package ‘base64enc’ ... | |
| ** package ‘base64enc’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpFecZYc/R.INSTALL681d59dac257/base64enc/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c base64.c -o base64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c uriencode.c -o uriencode.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utf8.c -o utf8.o | |
| gcc -shared -L/usr/local/lib64 -o base64enc.so base64.o uriencode.o utf8.o | |
| make[1]: Leaving directory '/tmp/RtmpFecZYc/R.INSTALL681d59dac257/base64enc/src' | |
| installing to /usr/local/lib64/R/library/base64enc/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (base64enc) | |
| begin installing package ‘lazyeval’ | |
| * installing *source* package ‘assertthat’ ... | |
| ** package ‘assertthat’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (assertthat) | |
| begin installing package ‘DBI’ | |
| * installing *source* package ‘lazyeval’ ... | |
| ** package ‘lazyeval’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmptDBvRP/R.INSTALL68656f7ab55a/lazyeval/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c expr.c -o expr.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c interp.c -o interp.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c lazy.c -o lazy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c name.c -o name.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o lazyeval.so expr.o interp.o lazy.o name.o utils.o | |
| make[1]: Leaving directory '/tmp/RtmptDBvRP/R.INSTALL68656f7ab55a/lazyeval/src' | |
| installing to /usr/local/lib64/R/library/lazyeval/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (lazyeval) | |
| begin installing package ‘BH’ | |
| * installing *source* package ‘DBI’ ... | |
| ** package ‘DBI’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (DBI) | |
| begin installing package ‘plogr’ | |
| * installing *source* package ‘plogr’ ... | |
| ** package ‘plogr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (plogr) | |
| begin installing package ‘Rcpp’ | |
| * installing *source* package ‘BH’ ... | |
| ** package ‘BH’ successfully unpacked and MD5 sums checked | |
| ** inst | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (BH) | |
| begin installing package ‘httr’ | |
| * installing *source* package ‘httr’ ... | |
| ** package ‘httr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** demo | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (httr) | |
| begin installing package ‘memoise’ | |
| * installing *source* package ‘memoise’ ... | |
| ** package ‘memoise’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (memoise) | |
| begin installing package ‘markdown’ | |
| * installing *source* package ‘Rcpp’ ... | |
| ** package ‘Rcpp’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpcBbVrs/R.INSTALL68df499c4221/Rcpp/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c Date.cpp -o Date.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c Module.cpp -o Module.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c Rcpp_init.cpp -o Rcpp_init.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c api.cpp -o api.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c attributes.cpp -o attributes.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include/ -I/usr/local/include -fpic -c barrier.cpp -o barrier.o | |
| g++ -shared -L/usr/local/lib64 -o Rcpp.so Date.o Module.o Rcpp_init.o api.o attributes.o barrier.o | |
| make[1]: Leaving directory '/tmp/RtmpcBbVrs/R.INSTALL68df499c4221/Rcpp/src' | |
| installing to /usr/local/lib64/R/library/Rcpp/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| code for methods in class “C++OverloadedMethods” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| code for methods in class “RcppClass” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| code for methods in class “RcppClass” was not checked for suspicious field assignments (recommended package ‘codetools’ not available?) | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (Rcpp) | |
| begin installing package ‘caTools’ | |
| * installing *source* package ‘markdown’ ... | |
| ** package ‘markdown’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp55cacq/R.INSTALL6a3f11e3804e/markdown/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rbase64.c -o Rbase64.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rinit.c -o Rinit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c Rmarkdown.c -o Rmarkdown.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c autolink.c -o autolink.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c buffer.c -o buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_href_e.c -o houdini_href_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c houdini_html_e.c -o houdini_html_e.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html.c -o html.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c html_smartypants.c -o html_smartypants.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c markdown.c -o markdown.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c stack.c -o stack.o | |
| gcc -shared -L/usr/local/lib64 -o markdown.so Rbase64.o Rinit.o Rmarkdown.o autolink.o buffer.o houdini_href_e.o houdini_html_e.o html.o html_smartypants.o markdown.o stack.o | |
| make[1]: Leaving directory '/tmp/Rtmp55cacq/R.INSTALL6a3f11e3804e/markdown/src' | |
| installing to /usr/local/lib64/R/library/markdown/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (markdown) | |
| begin installing package ‘rprojroot’ | |
| * installing *source* package ‘caTools’ ... | |
| ** package ‘caTools’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpiE0lXZ/R.INSTALL6aa11dc2fdf5/caTools/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -c Gif2R.cpp -o Gif2R.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -c GifTools.cpp -o GifTools.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/local/include -fpic -g -O2 -c runfunc.c -o runfunc.o | |
| g++ -shared -L/usr/local/lib64 -o caTools.so Gif2R.o GifTools.o runfunc.o | |
| make[1]: Leaving directory '/tmp/RtmpiE0lXZ/R.INSTALL6aa11dc2fdf5/caTools/src' | |
| installing to /usr/local/lib64/R/library/caTools/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (caTools) | |
| begin installing package ‘tibble’ | |
| * installing *source* package ‘rprojroot’ ... | |
| ** package ‘rprojroot’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (rprojroot) | |
| begin installing package ‘testthat’ | |
| * installing *source* package ‘testthat’ ... | |
| ** package ‘testthat’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpgmB7Cm/R.INSTALL6b093a171fad/testthat/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c label.c -o label.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -g -O2 -c reassign.c -o reassign.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -c test-catch.cpp -o test-catch.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -c test-example.cpp -o test-example.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -I/usr/local/include -fpic -c test-runner.cpp -o test-runner.o | |
| g++ -shared -L/usr/local/lib64 -o testthat.so label.o reassign.o test-catch.o test-example.o test-runner.o | |
| make[1]: Leaving directory '/tmp/RtmpgmB7Cm/R.INSTALL6b093a171fad/testthat/src' | |
| installing to /usr/local/lib64/R/library/testthat/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (testthat) | |
| begin installing package ‘RMySQL’ | |
| * installing *source* package ‘stringi’ ... | |
| ** package ‘stringi’ successfully unpacked and MD5 sums checked | |
| checking for local ICUDT_DIR... icu55/data | |
| checking for R_HOME... /usr/local/lib64/R | |
| checking for R... /usr/local/lib64/R/bin/R | |
| checking for R >= 3.1.0... yes | |
| checking for cat... /usr/bin/cat | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking how to run the C preprocessor... g++ -E | |
| checking for grep that handles long lines and -e... /usr/bin/grep | |
| checking for egrep... /usr/bin/grep -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking elf.h usability... yes | |
| checking elf.h presence... yes | |
| checking for elf.h... yes | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ -std=gnu++11 accepts -g... yes | |
| checking whether the C++ compiler supports the long long type... yes | |
| checking whether the compiler implements namespaces... yes | |
| checking whether the compiler supports Standard Template Library... yes | |
| checking whether std::map is available... yes | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking with pkg-config for ICU4C installed... 57.1 | |
| checking for ICU4C >= 50... yes | |
| checking for proper CPPFLAGS, LDFLAGS, and LIBS... done | |
| checking whether we may build an ICU-based project... yes | |
| checking for available ICU data library (ucnv, uloc, utrans)... yes | |
| checking for available ICU data library (ucol)... yes | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| config.status: creating src/uconfig_local.h | |
| config.status: creating src/install.libs.R | |
| *** stringi configure summary: | |
| ICU_FOUND=1 | |
| ICUDT_DIR=icu55/data | |
| STRINGI_CXXSTD=CXX_STD=CXX11 | |
| STRINGI_CFLAGS= -fpic | |
| STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H | |
| STRINGI_CXXFLAGS= -fpic | |
| STRINGI_LDFLAGS=-L/usr/lib/x86_64-linux-gnu | |
| STRINGI_LIBS=-licui18n -licuuc -licudata | |
| *** compiler settings used: | |
| CC=gcc | |
| CPP=g++ -E | |
| LD=g++ | |
| CFLAGS=-g -O2 -fpic | |
| CPPFLAGS=-I/usr/local/include -UDEBUG -DNDEBUG | |
| CXX=g++ -std=gnu++11 | |
| CXXFLAGS= -fpic | |
| LDFLAGS= | |
| LIBS= | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmp0WAHyS/R.INSTALL5ef158a726d0/stringi/src' | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_brkiter.cpp -o stri_brkiter.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_collator.cpp -o stri_collator.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_common.cpp -o stri_common.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_compare.cpp -o stri_compare.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_base.cpp -o stri_container_base.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_listint.cpp -o stri_container_listint.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_listraw.cpp -o stri_container_listraw.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_listutf8.cpp -o stri_container_listutf8.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_regex.cpp -o stri_container_regex.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_usearch.cpp -o stri_container_usearch.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_utf16.cpp -o stri_container_utf16.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_utf8.cpp -o stri_container_utf8.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_encoding_detection.cpp -o stri_encoding_detection.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_encoding_management.cpp -o stri_encoding_management.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_escape.cpp -o stri_escape.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_exception.cpp -o stri_exception.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_ICU_settings.cpp -o stri_ICU_settings.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_join.cpp -o stri_join.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_length.cpp -o stri_length.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_pad.cpp -o stri_pad.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_prepare_arg.cpp -o stri_prepare_arg.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_random.cpp -o stri_random.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_reverse.cpp -o stri_reverse.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_count.cpp -o stri_search_class_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_detect.cpp -o stri_search_class_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_extract.cpp -o stri_search_class_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_locate.cpp -o stri_search_class_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_replace.cpp -o stri_search_class_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_split.cpp -o stri_search_class_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_subset.cpp -o stri_search_class_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_class_trim.cpp -o stri_search_class_trim.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_common.cpp -o stri_search_common.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_count.cpp -o stri_search_coll_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_split.cpp -o stri_search_coll_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_in.cpp -o stri_search_in.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_other_replace.cpp -o stri_search_other_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_other_split.cpp -o stri_search_other_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_count.cpp -o stri_search_regex_count.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_match.cpp -o stri_search_regex_match.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_split.cpp -o stri_search_regex_split.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_sort.cpp -o stri_sort.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_stats.cpp -o stri_stats.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_stringi.cpp -o stri_stringi.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_sub.cpp -o stri_sub.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_test.cpp -o stri_test.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_zone.cpp -o stri_time_zone.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_calendar.cpp -o stri_time_calendar.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_symbols.cpp -o stri_time_symbols.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_time_format.cpp -o stri_time_format.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_casemap.cpp -o stri_trans_casemap.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_other.cpp -o stri_trans_other.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_normalization.cpp -o stri_trans_normalization.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_ucnv.cpp -o stri_ucnv.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_uloc.cpp -o stri_uloc.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_utils.cpp -o stri_utils.o | |
| g++ -std=gnu++11 -I/usr/local/lib64/R/include -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -fpic -fpic -c stri_wrap.cpp -o stri_wrap.o | |
| g++ -std=gnu++11 -shared -L/usr/local/lib64 -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_replace.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_stats.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata | |
| make[1]: Leaving directory '/tmp/Rtmp0WAHyS/R.INSTALL5ef158a726d0/stringi/src' | |
| installing via 'install.libs.R' to /usr/local/lib64/R/library/stringi | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (stringi) | |
| begin installing package ‘RPostgreSQL’ | |
| * installing *source* package ‘tibble’ ... | |
| ** package ‘tibble’ successfully unpacked and MD5 sums checked | |
| ** libs | |
| make[1]: Entering directory '/tmp/Rtmpe11REn/R.INSTALL6afd69df597/tibble/src' | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I"/usr/local/lib64/R/library/Rcpp/include" -I/usr/local/include -fpic -c RcppExports.cpp -o RcppExports.o | |
| g++ -I/usr/local/lib64/R/include -DNDEBUG -I"/usr/local/lib64/R/library/Rcpp/include" -I/usr/local/include -fpic -c matrixToDataFrame.cpp -o matrixToDataFrame.o | |
| g++ -shared -L/usr/local/lib64 -o tibble.so RcppExports.o matrixToDataFrame.o | |
| make[1]: Leaving directory '/tmp/Rtmpe11REn/R.INSTALL6afd69df597/tibble/src' | |
| installing to /usr/local/lib64/R/library/tibble/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (tibble) | |
| begin installing package ‘desc’ | |
| * installing *source* package ‘desc’ ... | |
| ** package ‘desc’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (desc) | |
| begin installing package ‘dplyr’ | |
| * installing *source* package ‘RMySQL’ ... | |
| ** package ‘RMySQL’ successfully unpacked and MD5 sums checked | |
| Found mysql_config cflags and libs! | |
| Using PKG_CFLAGS=-I/usr/include/mysql | |
| Using PKG_LIBS=-L/usr/lib/x86_64-linux-gnu -lmariadbclient -lpthread -lz -lm -ldl | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpYRlc1H/R.INSTALL6bab2dde9fe0/RMySQL/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c RMySQL-init.c -o RMySQL-init.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c connection.c -o connection.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c db-apply.c -o db-apply.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c driver.c -o driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c exception.c -o exception.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c fields.c -o fields.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c result.c -o result.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/mysql -I/usr/local/include -fpic -g -O2 -c utils.c -o utils.o | |
| gcc -shared -L/usr/local/lib64 -o RMySQL.so RMySQL-init.o connection.o db-apply.o driver.o exception.o fields.o result.o utils.o -L/usr/lib/x86_64-linux-gnu -lmariadbclient -lpthread -lz -lm -ldl | |
| make[1]: Leaving directory '/tmp/RtmpYRlc1H/R.INSTALL6bab2dde9fe0/RMySQL/src' | |
| installing to /usr/local/lib64/R/library/RMySQL/libs | |
| ** R | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RMySQL) | |
| begin installing package ‘RSQLite’ | |
| * installing *source* package ‘RPostgreSQL’ ... | |
| ** package ‘RPostgreSQL’ successfully unpacked and MD5 sums checked | |
| checking for gcc... gcc | |
| checking for C compiler default output file name... a.out | |
| checking whether the C compiler works... yes | |
| checking whether we are cross compiling... no | |
| checking for suffix of executables... | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking target system type... x86_64-unknown-linux-gnu | |
| checking for pg_config... /usr/bin/pg_config | |
| checking for "/usr/include/postgresql/libpq-fe.h"... yes | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpaklJ9S/R.INSTALL6bf06014260a/RPostgreSQL/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-DBI.c -o RS-DBI.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-PQescape.c -o RS-PQescape.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-PostgreSQL.c -o RS-PostgreSQL.o | |
| In file included from /usr/local/lib64/R/include/Rdefines.h:40:0, | |
| from S4R.h:64, | |
| from RS-DBI.h:29, | |
| from RS-PostgreSQL.h:25, | |
| from RS-PostgreSQL.c:17: | |
| RS-PostgreSQL.c: In function ‘RS_PostgreSQL_createDataMappings’: | |
| RS-PostgreSQL.c:446:13: warning: passing argument 1 of ‘Rf_protect’ from incompatible pointer type [-Wincompatible-pointer-types] | |
| PROTECT(flds = RS_DBI_allocFields(num_fields)); | |
| ^ | |
| /usr/local/lib64/R/include/Rinternals.h:691:31: note: in definition of macro ‘PROTECT’ | |
| #define PROTECT(s) Rf_protect(s) | |
| ^ | |
| /usr/local/lib64/R/include/Rinternals.h:1419:6: note: expected ‘SEXP {aka struct SEXPREC *}’ but argument is of type ‘RS_DBI_fields * {aka struct st_sdbi_fields *}’ | |
| SEXP Rf_protect(SEXP); | |
| ^~~~~~~~~~ | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-copy.c -o RS-pgsql-copy.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-getResult.c -o RS-pgsql-getResult.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-pqexec.c -o RS-pgsql-pqexec.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I/usr/include/postgresql -I/usr/local/include -fpic -g -O2 -c RS-pgsql-pqexecparams.c -o RS-pgsql-pqexecparams.o | |
| gcc -shared -L/usr/local/lib64 -o RPostgreSQL.so RS-DBI.o RS-PQescape.o RS-PostgreSQL.o RS-pgsql-copy.o RS-pgsql-getResult.o RS-pgsql-pqexec.o RS-pgsql-pqexecparams.o -L/usr/lib/x86_64-linux-gnu -lpq | |
| make[1]: Leaving directory '/tmp/RtmpaklJ9S/R.INSTALL6bf06014260a/RPostgreSQL/src' | |
| installing to /usr/local/lib64/R/library/RPostgreSQL/libs | |
| ** R | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** testing if installed package can be loaded | |
| * DONE (RPostgreSQL) | |
| begin installing package ‘stringr’ | |
| * installing *source* package ‘stringr’ ... | |
| ** package ‘stringr’ successfully unpacked and MD5 sums checked | |
| ** R | |
| ** data | |
| *** moving datasets to lazyload DB | |
| ** inst | |
| ** preparing package for lazy loading | |
| ** help | |
| *** installing help indices | |
| ** building package indices | |
| ** installing vignettes | |
| ** testing if installed package can be loaded | |
| * DONE (stringr) | |
| begin installing package ‘xml2’ | |
| * installing *source* package ‘git2r’ ... | |
| ** package ‘git2r’ successfully unpacked and MD5 sums checked | |
| checking build system type... x86_64-unknown-linux-gnu | |
| checking host system type... x86_64-unknown-linux-gnu | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking for library containing inflate... -lz | |
| checking for pkg-config... /usr/bin/pkg-config | |
| checking pkg-config is at least version 0.9.0... yes | |
| checking for libssl... yes | |
| checking for library containing EVP_EncryptInit... -lcrypto | |
| checking for library containing SSL_library_init... no | |
| checking for library containing OPENSSL_init_ssl... none required | |
| checking for library containing libssh2_version... no | |
| configure: WARNING: | |
| --------------------------------------------- | |
| Unable to find the LibSSH2 library on this | |
| system. Building a version without support | |
| for SSH transport. | |
| To build with SSH support, please install: | |
| libssh2-1-dev (package on e.g. Debian and Ubuntu) | |
| libssh2-devel (package on e.g. Fedora, CentOS and RHEL) | |
| libssh2 (Homebrew package on OS X) | |
| and try again. | |
| If the LibSSH2 library is installed on | |
| your system but the git2r configuration | |
| is unable to find it, you can specify | |
| the include and lib path to LibSSH2 with: | |
| R CMD INSTALL --configure-args='--with-libssh2-include=INCLUDE_PATH --with-libssh2-lib=LIB_PATH' git2r | |
| --------------------------------------------- | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking for curl-config... /usr/bin/curl-config | |
| checking for the version of libcurl... 7.52.1 | |
| checking whether libcurl is usable... yes | |
| checking for curl_free... yes | |
| checking for ANSI C header files... no | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking size of void*... 8 | |
| checking for struct stat.st_mtim... yes | |
| checking for struct stat.st_mtimespec... no | |
| checking for struct stat.st_mtime_nsec... no | |
| checking for struct stat.st_mtim.tv_nsec... yes | |
| checking for futimens... yes | |
| checking for qsort_r... yes | |
| checking for qsort_s... no | |
| ----- Results of the git2r package configure ----- | |
| OpenSSL to talk over HTTPS...........: yes | |
| LibSSH2 to enable the SSH transport..: no | |
| -------------------------------------------------- | |
| configure: creating ./config.status | |
| config.status: creating src/Makevars | |
| ** libs | |
| make[1]: Entering directory '/tmp/RtmpkaxnMG/R.INSTALL5d314bbd4e4d/git2r/src' | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r.c -o git2r.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_arg.c -o git2r_arg.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_blame.c -o git2r_blame.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_blob.c -o git2r_blob.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_branch.c -o git2r_branch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_checkout.c -o git2r_checkout.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_clone.c -o git2r_clone.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_commit.c -o git2r_commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_config.c -o git2r_config.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_cred.c -o git2r_cred.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_diff.c -o git2r_diff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_error.c -o git2r_error.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_graph.c -o git2r_graph.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_index.c -o git2r_index.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_libgit2.c -o git2r_libgit2.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_merge.c -o git2r_merge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_note.c -o git2r_note.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_object.c -o git2r_object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_odb.c -o git2r_odb.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_oid.c -o git2r_oid.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_push.c -o git2r_push.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reference.c -o git2r_reference.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reflog.c -o git2r_reflog.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_remote.c -o git2r_remote.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_repository.c -o git2r_repository.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_reset.c -o git2r_reset.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_revparse.c -o git2r_revparse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_revwalk.c -o git2r_revwalk.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_signature.c -o git2r_signature.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_stash.c -o git2r_stash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_status.c -o git2r_status.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_tag.c -o git2r_tag.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_transfer.c -o git2r_transfer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c git2r_tree.c -o git2r_tree.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/annotated_commit.c -o libgit2/src/annotated_commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/apply.c -o libgit2/src/apply.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attr_file.c -o libgit2/src/attr_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attr.c -o libgit2/src/attr.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/attrcache.c -o libgit2/src/attrcache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blame_git.c -o libgit2/src/blame_git.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blame.c -o libgit2/src/blame.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/blob.c -o libgit2/src/blob.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/branch.c -o libgit2/src/branch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/buf_text.c -o libgit2/src/buf_text.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/buffer.c -o libgit2/src/buffer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/cache.c -o libgit2/src/cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/checkout.c -o libgit2/src/checkout.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/cherrypick.c -o libgit2/src/cherrypick.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/clone.c -o libgit2/src/clone.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/commit_list.c -o libgit2/src/commit_list.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/commit.c -o libgit2/src/commit.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config_cache.c -o libgit2/src/config_cache.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config_file.c -o libgit2/src/config_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/config.c -o libgit2/src/config.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/crlf.c -o libgit2/src/crlf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/curl_stream.c -o libgit2/src/curl_stream.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/date.c -o libgit2/src/date.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/delta.c -o libgit2/src/delta.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/describe.c -o libgit2/src/describe.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_driver.c -o libgit2/src/diff_driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_file.c -o libgit2/src/diff_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_generate.c -o libgit2/src/diff_generate.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_parse.c -o libgit2/src/diff_parse.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_print.c -o libgit2/src/diff_print.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_stats.c -o libgit2/src/diff_stats.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_tform.c -o libgit2/src/diff_tform.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff_xdiff.c -o libgit2/src/diff_xdiff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/diff.c -o libgit2/src/diff.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/errors.c -o libgit2/src/errors.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fetch.c -o libgit2/src/fetch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fetchhead.c -o libgit2/src/fetchhead.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/filebuf.c -o libgit2/src/filebuf.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fileops.c -o libgit2/src/fileops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/filter.c -o libgit2/src/filter.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/fnmatch.c -o libgit2/src/fnmatch.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/global.c -o libgit2/src/global.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/graph.c -o libgit2/src/graph.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/hash.c -o libgit2/src/hash.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/hashsig.c -o libgit2/src/hashsig.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/ident.c -o libgit2/src/ident.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/ignore.c -o libgit2/src/ignore.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/index.c -o libgit2/src/index.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/indexer.c -o libgit2/src/indexer.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/iterator.c -o libgit2/src/iterator.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge_driver.c -o libgit2/src/merge_driver.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge_file.c -o libgit2/src/merge_file.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/merge.c -o libgit2/src/merge.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/message.c -o libgit2/src/message.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/mwindow.c -o libgit2/src/mwindow.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/netops.c -o libgit2/src/netops.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/notes.c -o libgit2/src/notes.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/object_api.c -o libgit2/src/object_api.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/object.c -o libgit2/src/object.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_loose.c -o libgit2/src/odb_loose.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_mempack.c -o libgit2/src/odb_mempack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb_pack.c -o libgit2/src/odb_pack.o | |
| gcc -I/usr/local/lib64/R/include -DNDEBUG -I. -Ilibgit2/src -Ilibgit2/include -Ilibgit2/deps/http-parser -I/usr/local/include -D_GNU_SOURCE -D_FILE_OFFSET_BITS=64 -DGIT_OPENSSL -DOPENSSL_SHA1 -DGIT_CURL -DGIT_ARCH_64 -DGIT_USE_STAT_MTIM -DGIT_USE_NSEC -DHAVE_FUTIMENS -DHAVE_QSORT_R -I/usr/local/include -fpic -g -O2 -c libgit2/src/odb.c -o libgit2/src/odb.o |
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These are the logs for https://gist.github.com/wch/4cd0c56757886c63522049a32b3c294f